Cucsat.G2789 (gene) Cucumber (B10) v3

Overview
NameCucsat.G2789
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionThioredoxin-like protein
Locationctg1041: 2050008 .. 2058385 (-)
RNA-Seq ExpressionCucsat.G2789
SyntenyCucsat.G2789
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGATTTTAGGTTTAAGCTGCAATGCTTTCGGCTTTGATCGTTTAGATTGAATAAGATGTGTGTGAATAGTCTGGAAAAGTTTAACTTGACAACGTTGGGTGTCTTGAAGCTGCTTTAGTTTCTTAAGCTTAAACTTAACTTGTCGACGTTGCAGGCAAAGGAGGATGAGCTATCTTCTACGAACCTTAACAAAGAAGGGAGAGGTGGATTCCCTTATTAGGGATACGATTGATAAGGTCCTAATTCTCCGATTTGGGCGGTGTTCTGATTCAGTTTGTCTCCTCCTTGATGACATTGTGTGTAACCAAGTCCCTCTATTTCTAACATCCCTGAATTTTGTTTTTTTCTTCCAAGGTTGATACGCTTTTTCAAAATCGATGATTTCCTTTTTCCTTGTGTTTCATTTTCTTTCAATGGTTTAGCTTGCTAAGTGCGCACGAGAAGTATCGAAGTTTGCTTCAGTAGCATTGGTTGATATTGATTCGGAGGAAATACAGGTTTATGTCAAGTACTTTGACATAACTCTCATACCGTCCACTGTTTTCTTCTTCAATGCCCATCATATGAAGATGGATTCAGGGTTAGTTTTATCCTGCTGGTCTTAGTTAATTCATTGCTTGATTTCTGTTCAAATATGTCTAGCATGGTTATGTAACATTGCATGTGGATGTCCATCTGTGTGGCCTTAGCTACTTGATTCGGGCAGTAGAGAAGCATAGCATCCCTTGCGATCTATAGCAAATTTCTGTTGAAATGAGAAGTGAAGATATTGGAGAGTATTTAATTTATTGGGAAAAGAAAACTGAAAATTTGTTTTCTGTTGAGAGGATGCTGTATAGATCCTCCTTACTATGTATTGATATGAGATAAAACAGCCTTGGGAGAATACAAACTCTCCAGGCAATTCAAGAGAGCTGGGAAACTATCCTCTCTCCTTAGAAACTACTATGACTAAAAGCATTCCCCTTCCCAATATTTTAAAAGAATTAAGGGGCAACCTAGAGGCGTTTTCTCCTGGTGAGGCAAGGTGTAAACCTCTAGGCAGTGTGAGCCATATTTCTAATTAAGACAACATATTTAAATTATAAAACATAAGATCTCATATATTCTTAACATTATAGTATATTTCCTATTAGTTCACTACATACAAAAAATTTAATCTTGACAAAAAAAATCTCAATTGTTCATCTAAATCTCATCCACAATATAATTATCATTAACAGTAATGGGATCTTCCATAGAGTTATCACCGTACCTAATAGTTTCATCCTCATTTTTTTGTCACTCTCAATATCTAACCCATTCCTCTTTGTCCAATGTCATCAATCTCTTCCCTTTATCTGTTTATGAAATATATTTTGTAAATTAAAGTTAGGACTGAGTGAATTTAGGAAACTTGTTAAATTTTAAAATTATTTCAATAAGTTACATATCTCCACTTTTAACATTTGGTTGTCTAGTCATAAACATTGATGTTAGAATCATCATCATGCTCAACCAAGAAATCAACTGTAGCCGAATATTATTTTGATTTTCAACAATCCACACATCATTAGGTGACACTTCATCTACTACCAATGGATCAACTTCTTCCATGAGACCCTTTCGCTTCTAGTGTCTATTCTTTGATGGCTAAGATGTTTGTTTGCCCTATCCCCAAAAAAGGAAAATGTGACTAGGATGAAAGATTTTGGACCGATCAACTTAATTACTAGTGTGTATACGATTCTCATGAAAGTGTGGGTAAACCGCTTGAAGAGGGTGCTTTCTCCTTTGGTTGGGGACTTCTGTTTCTTTCTTCTTTGGTTTGGTTGGGGAATTCTATTTCTTTCTCCTTTGCGTTCTGTTAACTGTTGTCGAATAGGAAAATGCCTAAGGTAGCCTATCTTCTCTCCTTGATTGAGGGTTTTGACTTTAGGCTTGGGAGAAGGGATCTTCATGTTTGGAGTCCTACCCCTTTGGAGGGATTCTCTTGTAAGTCGTTCTTAGGAATTTTATTGGATCCTTCTTTTATTGAAGTCAGTCTTTGGCGTATTATGGAGGATTTAGGACTCCAAAGAAAGTCAAGTTCTTTTTTGGCAAGTTTTCCTTGGTTATGTCAACACGGTGGATAAACCTTTGAGAAAGATGCCTTTGTTCATGGGTCCTTTTAGTTGTCTTCTTTGACGAAAGGCAGAGAAAAACTTCAATCATCTTCTCTTGGAGTGTCATTTTGCAATATCTGTGTGGCATGGCTTCTTTCAGGAGTTTGATTTTGCACTTGCTCGTTAGAGGGGTGTTCGTTTGATGATCAAGGAGTTCCTCCTCCATTTGCCTTTCACTTTGAAAGGCAATTTTATTTGGTTTGCTGGGGTGTGCATGTTGTTGTGGGATCTTGGGGAAGAGGAAGAATAGAGTATTTCATGGTCAGAAGAGGGACCCTAGCGAAGTTTGGTCTTTGGTGAGCTTTCATGTTTCTCTTTGGGTTCAGTTTCTAAGACTTTTTACCTAGGCAATATCTTACTTAGTTGGAAACCTTTTCTTTGGTGACTTTTTTCCTTTTGTGGTATTTTTTTTTGTATGCTTTTGTATTTTAATTTTTTTTTGCGAAATTATTTTAAATGACAACTTTTGAAAATATTTACAAATATAGAAAAATATCACAATCTATTTGTACTATCAATGTTTATCATTATTAAGATATATACAGATTGTAGTCTATCGCGGTCTATCGCGGTCCATCGTAGATAGACTGTGATATTTTGCTATATTTTGTAATATTTGAAAATAAGATCTTTTTTTCCTCAATAAAATGGAAAATTAACAAGCAAGGAGAAGACACAAATGACCTCTTTATTAAATGCTTTTAGTCATGGTTATATTCAATAGAAAATCAATGAATTTTTTGTGACAAAGAAAGATCTTTGAGTTTTGTGGATGTTGTTAAACGGTGAGAAAGAGAACACTAGGTTTATGTGGAAAACCCTAGAACAGGGAGAAAAGACCATGACAGATAGTCACTTTTTATTATTTTCACACAATGAAAGTTACAAGATAAATAATACGAAAAAGGAAATAAACTAGGGTAAATTAAAATACTAAAATACCCTTGAGGCTATAAACTATCAACAAAGGCCCTTATTTCTAACACTTTCCTTTGAGTTGGGGCATAGATGTCAATCAGACTCAACTTACTAACACGAGTCAAAACTTGGCTTAAGTAACCCTTTGATGAGAACATTACCAACTTGTTGACAAGATGGAATATACGGAATACAAATATTGCCATTGTCCGGTTTCTTTTTTATAAATTGTGTTAATCTCCACATGTTTCGTTCTATCATGTTGTACAGGATTATTGGCTATATTTATAGCCACTTTATTATCACAATAGAGCTTCATAGGTAAAACACTATCTTGGTGAAGATTAGACAATTTTCTTCAACCATATTTGTTTATAGATTTCCAAACTGATAGCTCTTTATTCAACTTTAGCACTGCTTCTAGCAACAAACTTTGCTTTTTACTTCTCCAAGTAACTAGGTTACCCCACTCTAAGGTACAATACCAGAAGTAGATTTTTTTGTCAATAACTGATCCTGGCCAATCAAAGTTGATATAAGCCTCAATATTCTGATTTATACTTTAGATTGAACACCTACTTGCACCCAACTACTTAGGAAGAGCACAAAGGTCCCACATATTATTCTTTTTCAAGAGCTCCCTTTCTTCCATGTACTGCATTTCCTTTATGAGATTCTTCCTTTAGTAAGTTATCCCAGGGATTTGTTTAGTGGGTGGAACAGTGTCATGGACACTCAGTATGGGAATGATGGGAATGAAGGTCAGTGGGGACTTAAAATGTGGACAAGTTAGTCTCTTCTCTTGTACTCTCCCCTAAAGAAAGGTTGATCCTCAAGGAGTTTACATCCATGACCATGGAGATGGAGTATTTTCGGGAAGAAGGATGGAAACATTTATAAGTTCGCTGGTGAAGGGGATTCCCGACGAAGACACATTTCTGAGCACAAGGGGTAAACTTAGTTTGAGTTGGAGAACATGGGAAGGAATTCAATTAATAAGATGAGTGCAGTGAGAACTGCATCCTGTATGATGGAAGCAAAGTATACAACACATGAGAGACCGTGCAACCTTGAGGAGGTGATGATTTTCCTTTTAGCCACCCATTTTGTTGAGGGGTATAGGCACACAAGTTTTTGTGGATAATGCCTTTGGAAAACAGAAAGTCACGAATGGTATTATTAAGGAACTCACAACTGTTATTTCTATGAAGAATAGTAATTTTTGTGTCGAGCAACGTCTTAATGGTAGTTTAAAATTGTTGAAATATCGTTGAAACCTCAGATTTATCAGTGATGAGAAAAACCCATGTGAGACGGGTAGGATCATTAATAAAGGTTACAAACCAATGTTTTCCCTTACAAACTATTATCCTTACTCGAGGGACCTAAAACGTCACTATGAATAATGGTGAAGGGTTGAGAAGGTTTGTAAGGTTGAGACGAAAAGGTGACCTTATGCTGCTTTGCACGGATGTACACATCATAAGACAGAAAAGAGACAAACTTTATTTAATAAATGAGGAATTAAATATTTCATATTGGAAATTTTGGTGACCAAGGCGAAAATGCTACAACGTATAATCTTTTTATGAAGTTGAGAAACAAGAAGACAACAAACTAGTCCTATAAACATTTCTTAAAGGGAGCATCATCATCAAGGAAATTAAGTCCCCTATTGAGCTGGGCAATGCCAGTCATCTTCCTCGAGCTCAACTCCTAAAAGAAAACATTATCTGGTGAGAAGGCAACTTGATAATTCAGATCTCTAGTTATCTTACTAATAAATAGTAAATTGTAAATTATTTTGGGTAAATGCAGTACATTTTGTAAAGTTAAATCATCAAAAGGAGAAATATGACGTGTGCCTACAATAGGAGCGAAGGACACATATGCAATTCAAATCTTTCATTACCAGCACTCAGAAGATATTTTAAGGATCTAGTCAAATGATCTCTGAATCAAGTATCCATGGTTTCTTACCATTTATGATGAGATGAGGAGTCTTAAGGATTGAGAGGTACTTACCAGGGTCACTTTGGCAATTTACCTAAGGTTGTGACTAGGGGGCACTCACCAATTCACTTATAAGAGCTTGTCTAGAGTTGGACTTGTCATTTGAAAGATGTCTTCTGCCATTTGGTGGTCTACCATGTAACTTCCTATACCAGGGTTTCTTACAGTATTCACACACCGGGGTCTGTTTCCCCATTTTGCTTATCACTGTCAGAGCCAGATATCTCGAGCAGTCGTAACATACAACAATGGTTTTCCTATCTGAGATTTCATACTATTATTCAACAATATGATTGAAGCAGGGAGTCTTCACCTTTCCAAATGCGCTCCTGTGGATCCCTAGTCTAGGTCTTGGTATCTCAAACTTGTGACGCCACTCAAGGCCCATTTTCATGGATTGAGACGAGGAGAAATAATTCTGATCATTCAACTTTTCTCCTGCAATTAACTCTGTGAAATTTCCCATAGAGCTAGACAAACAGTTTGCTGTAATTATAGTAGGGAAAGAGGTTACTGGATTCTAAACACATGTAGGTCGAAAGAAATGTCAAAATTCATTGTACTGGAATTTATGTTTGTGGAAGCACCTAGGGCTGTCCCAGGAGCAGCAATTTGTTGCTGAAAACTTGTTTGAAGATTAGCCAATTGTTGTACCATTAATAGGAGATAAACCAACCAAACCTTGATGTTCATGACTAGGCGACGCAAGGTGAGGAAGAACTGGTTTCTGTAAGAAGCTTGTTGCTGCGGCAAGGGATTTACCCTTGTGGTAGGTGGACAACTCACTAATTGCGGTTTAACGGTGTATGTTTTAGCTAGGGTTTCCATCAAAGAGTTATGGTGGCGCTAGAGTTGGGCGGATATGCAAGGACTAAAGACAACGATCAATGATGGCTTGGACGACAGCGGTAATATTGATGGTGAAAAAGTTGGTGGCTTTGATGGCGATCATCAGAGGCCCATTGCCAGCTATGACAGCTGCGAGATTGTTGCAAAAGTAAGGTTATCTTGCACTGGTTGGTTCCGTTGATGACAACTATGGTATTGTACCTCTCTAATACCATGTTAAACAGTGAGAAAGAGACCATTAGGTTTAGATGGAAAACCCTAGAACATGGAGAAAAAACCACGATAGAGTTACTTTTTATTATTTTGACACAGTGAAAGTTACAAAAGAAGACAAGATAGGCTTTAGCAAGCCTTAATTCAAAAAATGAAATAAACTTATGGTAAAGTAAAATACTAACCTACCCTCGGGGCTACAAACTATTACAATGTGGCTTTCTGGAAGAGCGCCAAATCTTGGATCCTGTTTTAATAGCAAGCGCAACTGTGGAGGACTATAGAATCCAAAAAAAGAAAAGATGGATCTTTAAATTAGACCTTGAAAAGGTCTTTAACAAAGTGGATTGGAATTTTTAGAAAATGTATTGCAAAACAAGATCTTCGACGTAGGATATTGTGTTATATTGGCCAGCCTTTACAGCATCCCCACTTTGAAGTCCTTGATGATCAGGACTTCCGGATCAGCCCTCTGCTTCAAACAGTTTTTTGCTCAATCAATCAACGCTTATTCTTCTTTGTTCTCAGCCTGCTGCTTTTGTTTTTGTTTTTGCTTTTGCTTTTGCTTTGGACAGATTCTTTTTATCTTTTTGTTTGGCTTTGTTTTTGTGGTTTTTAATTTTGATATTGTATTTTCGCTTTTTGGTTGTGTTGAGGGCGCTAAGGGGGTGTCAACTTAGTTGAGATGCCCGAATGCACTTGTTGATCCTCCCTCTTCCCTATTGCTTTTTGTATAATCCTTATGTACATTGAGCTTTGTCTCTTTATTTATATTAATAATAGTGAGACTCATGTCCTTTTCAAAAAACGCCTCTTATTTCTAACTGATATTACTATCTTAGTTGGTTTGAACTGAAGTATTATCTTGAAAATCTTTTATATTCTTTCTCATTATTTTTCATCAATTATAGAGTTAGTCTTTGTTAGGGGGTGGTAAATTTAGGAATATTTAATTGTGCCTCTTATGTATTCTACGTGTTTTTATTTTATTTTATTCTTTTTAATGGTGAAAGGGTATTCTTTTGACATGCAGGACTGCGGATCATACAAAGTGGGTCGGCGCTTTTCACCAAAAGCAGGATTTTATTGATGTTGTGGAGGTAACTGGTCTCTGATTTTGGAACCTAAATTAGAAGCTGTGAATGGAAAAGATTGTTTGATCTTTTATATGGAATTTTTGCCTGTGGTTAGACAGCAACATTAGTTGTGATGGCATTAAATAGCTATGGCATTTGCAATATTTTCACTGGTTGAAGAGCTTTTTGTACTTTGTTAGATATTAACTTCCCTGCACTCAGTACATCCCGACAATTATAGAATATAAGCAGAGCAATAGAGCTTTGATGTATATTGATGATATAAACTAAAGATAAAGTCCTCTATTATAATATCCAAACAAGGGGGAACAAGTACTCAACAGAATGAACACACAAAACAGATAAACTTAGAAAGAAAGTAAATGCAAAACCAGCACATTCGAGAGACCACCTGATCCTCTCCTCTAAAAGCCCCTTGGGAGGAGAGGACTTGAAAACATTCTTCATTTTTCTCTTGGAAATGGACTTGAAAATTCTTCATTTTTCTTTTATGGCAGGCAATATTTAGGGGAGCAATGAAAGGCAAGCTCATTGTGAATTGTCCGTTGCCTCCTGAGCGAATTCCAAAATACCAGTTATTCTACAAGGATGTGTAGGAGATGAACCGGTGTGTAAAGGCTTCACGGTATTTTTTCCTTCCTCCTAGTTTATATCTTACTAGTTTTTCAATGGTATCAGTCATCCTGTGTAGTCTAATTTTGGTGAATTGTCAGTCAAGTTGCCATAACTGAAAGAATGGCTTAAATGAATTGATTTTCCATGAAGAATGTTGCCAAAATGCTCTCGTATCTCCAAATTTCCTCTGCATTTGAAGTGTTTCAACATTTCTGGTGGTACGCTTGGAATTTGGGAACAGAAGAAAAGTTTGTGTGAGCATTTTTCTTCAGCTACCGATAGAAAATGGGGTTAAGTTGAGAAAGTTCAGGTTATCTTGTTTCAAGTGGTGAGATTATAGTTCATTCACTCTCTTCATTTGTGGAACTAATTTCCCTTGTGTTAGATTGCTAGTTTGTCAGTGGGAGATTAATCATGTGTAAAGGCACCTCTTATATTTTTTATTTCGTGAAACACATTAATGAAAATAGTGAATGTTTTCTTCACCTCCAGTTACTTGGAAGCAATAGAATGAATGATTAAAAAAGTTCCCTTTTCCTTCTTA

Coding sequence (CDS)

ATGAGCTATCTTCTACGAACCTTAACAAAGAAGGGAGAGGTGGATTCCCTTATTAGGGATACGATTGATAAGGTCCTAATTCTCCGATTTGGGCGGTGTTCTGATTCAGTTTGTCTCCTCCTTGATGACATTCTTGCTAAGTGCGCACGAGAAGTATCGAAGTTTGCTTCAGTAGCATTGGTTGATATTGATTCGGAGGAAATACAGGTTTATGTCAAGTACTTTGACATAACTCTCATACCGTCCACTGTTTTCTTCTTCAATGCCCATCATATGAAGATGGATTCAGGGACTGCGGATCATACAAAGTGGGTCGGCGCTTTTCACCAAAAGCAGGATTTTATTGATGTTGTGGAGGCAATATTTAGGGGAGCAATGAAAGGCAAGCTCATTGTGAATTGTCCGTTGCCTCCTGAGCGAATTCCAAAATACCAGTTATTCTACAAGGATGTGTAG

Protein sequence

MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVALVDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEAIFRGAMKGKLIVNCPLPPERIPKYQLFYKDV
Homology
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BLAST of Cucsat.G2789 vs. ExPASy Swiss-Prot
Match: Q9NX01 (Thioredoxin-like protein 4B OS=Homo sapiens OX=9606 GN=TXNL4B PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.4e-46
Identity = 90/151 (59.60%), Postives = 116/151 (76.82%), Query Frame = 0 

Query: 5   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 64
           MS+LL  LT K EVD  I+ T +KVL+LRFGR  D VCL LDDIL+K + ++SK A++ L
Sbjct: 1   MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYL 60

Query: 65  VDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 124
           VD+D  +  VY +YFDI+ IPSTVFFFN  HMK+D G+ DHTK+VG+F  KQDFID++E 
Sbjct: 61  VDVD--QTAVYTQYFDISYIPSTVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEV 120

Query: 125 IFRGAMKGKLIVNCPLPPERIPKYQLFYKDV 156
           I+RGAM+GKLIV  P+ P+ IPKY L Y+D+
Sbjct: 121 IYRGAMRGKLIVQSPIDPKNIPKYDLLYQDI 149

[Close]
BLAST of Cucsat.G2789 vs. ExPASy Swiss-Prot
Match: Q8BUH1 (Thioredoxin-like protein 4B OS=Mus musculus OX=10090 GN=Txnl4b PE=2 SV=2)

HSP 1 Score: 185.3 bits (469), Expect = 5.4e-46
Identity = 89/151 (58.94%), Postives = 115/151 (76.16%), Query Frame = 0 

Query: 5   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 64
           MS+LL  LT K EVD  I+ T +KVL+LRFGR  D VCL LDDIL+K + ++SK A++ L
Sbjct: 1   MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSADLSKMAAIYL 60

Query: 65  VDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 124
           VD+D     VY +YFDI+ IPSTVFFFN  HMK+D G+ DHTK+VG+F  KQDFID++E 
Sbjct: 61  VDVD--HTPVYTQYFDISYIPSTVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEV 120

Query: 125 IFRGAMKGKLIVNCPLPPERIPKYQLFYKDV 156
           I+RGAM+GKLIV  P+ P+ +PKY L Y+D+
Sbjct: 121 IYRGAMRGKLIVQSPIDPKNVPKYDLLYQDI 149

[Close]
BLAST of Cucsat.G2789 vs. ExPASy Swiss-Prot
Match: P83876 (Thioredoxin-like protein 4A OS=Homo sapiens OX=9606 GN=TXNL4A PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-16
Identity = 47/135 (34.81%), Postives = 78/135 (57.78%), Query Frame = 0 

Query: 5   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 64
           MSY+L  L    +VD  I    D+V+++RFG   D  C+ +D++L   A +V  FA + L
Sbjct: 1   MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60

Query: 65  VDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 124
           VDI   E+  + K +++    + +FFF   H+ +D GT ++ K   A   KQ+ +D++E 
Sbjct: 61  VDI--TEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIET 120

Query: 125 IFRGAMKGKLIVNCP 140
           ++RGA KG+ +V  P
Sbjct: 121 VYRGARKGRGLVVSP 133

[Close]
BLAST of Cucsat.G2789 vs. ExPASy Swiss-Prot
Match: P83877 (Thioredoxin-like protein 4A OS=Mus musculus OX=10090 GN=Txnl4a PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-16
Identity = 47/135 (34.81%), Postives = 78/135 (57.78%), Query Frame = 0 

Query: 5   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 64
           MSY+L  L    +VD  I    D+V+++RFG   D  C+ +D++L   A +V  FA + L
Sbjct: 1   MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60

Query: 65  VDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 124
           VDI   E+  + K +++    + +FFF   H+ +D GT ++ K   A   KQ+ +D++E 
Sbjct: 61  VDI--TEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIET 120

Query: 125 IFRGAMKGKLIVNCP 140
           ++RGA KG+ +V  P
Sbjct: 121 VYRGARKGRGLVVSP 133

[Close]
BLAST of Cucsat.G2789 vs. ExPASy Swiss-Prot
Match: Q9FE62 (Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana OX=3702 GN=YLS8 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-16
Identity = 51/137 (37.23%), Postives = 78/137 (56.93%), Query Frame = 0 

Query: 5   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 64
           MSYLL  L     VD  I    ++++++RFG   D  C+ +D++LA  A  +  FA + L
Sbjct: 1   MSYLLPHLHSGWAVDQSILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60

Query: 65  VDI-DSEEIQVYVKYFDITLIPSTV-FFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVV 124
           VDI +  +     + +D    PSTV FFF   H+ +D GT ++ K   A   KQ+FID++
Sbjct: 61  VDITEVPDFNTMYELYD----PSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDII 120

Query: 125 EAIFRGAMKGKLIVNCP 140
           E ++RGA KG+ +V  P
Sbjct: 121 ETVYRGARKGRGLVIAP 133

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BLAST of Cucsat.G2789 vs. NCBI nr
Match: XP_004139666.1 (thioredoxin-like protein 4B [Cucumis sativus] >XP_011659173.1 thioredoxin-like protein 4B [Cucumis sativus] >XP_031745245.1 thioredoxin-like protein 4B [Cucumis sativus] >XP_031745246.1 thioredoxin-like protein 4B [Cucumis sativus] >KGN44925.2 hypothetical protein Csa_015728 [Cucumis sativus])

HSP 1 Score: 298 bits (762), Expect = 1.35e-101
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 5   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 64
           MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL
Sbjct: 1   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 60

Query: 65  VDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 124
           VDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA
Sbjct: 61  VDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 120

Query: 125 IFRGAMKGKLIVNCPLPPERIPKYQLFYKDV 155
           IFRGAMKGKLIVNCPLPPERIPKYQLFYKDV
Sbjct: 121 IFRGAMKGKLIVNCPLPPERIPKYQLFYKDV 151

[Close]
BLAST of Cucsat.G2789 vs. NCBI nr
Match: XP_008447285.1 (PREDICTED: thioredoxin-like protein 4B [Cucumis melo] >XP_008447286.1 PREDICTED: thioredoxin-like protein 4B [Cucumis melo] >XP_008447287.1 PREDICTED: thioredoxin-like protein 4B [Cucumis melo] >XP_008447288.1 PREDICTED: thioredoxin-like protein 4B [Cucumis melo] >XP_008447289.1 PREDICTED: thioredoxin-like protein 4B [Cucumis melo] >XP_008447290.1 PREDICTED: thioredoxin-like protein 4B [Cucumis melo])

HSP 1 Score: 289 bits (739), Expect = 4.34e-98
Identity = 145/151 (96.03%), Postives = 150/151 (99.34%), Query Frame = 0 

Query: 5   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 64
           MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFAS+AL
Sbjct: 1   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 65  VDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 124
           VDIDSEE+QVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQ+FIDVVEA
Sbjct: 61  VDIDSEEMQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQNFIDVVEA 120

Query: 125 IFRGAMKGKLIVNCPLPPERIPKYQLFYKDV 155
           IFRGAMKGKLIVNCPLPPE+IPKYQL +KDV
Sbjct: 121 IFRGAMKGKLIVNCPLPPEQIPKYQLLFKDV 151

[Close]
BLAST of Cucsat.G2789 vs. NCBI nr
Match: XP_022152114.1 (thioredoxin-like protein 4B [Momordica charantia] >XP_022152121.1 thioredoxin-like protein 4B [Momordica charantia])

HSP 1 Score: 288 bits (736), Expect = 1.24e-97
Identity = 143/151 (94.70%), Postives = 149/151 (98.68%), Query Frame = 0 

Query: 5   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 64
           MSYLLRTLTKK EVDS+IRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFAS+AL
Sbjct: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 65  VDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 124
           VDIDSEEIQVY+KYFDI+LIPSTVFFFNAHHMKMDSGTADHTKW+GAFHQKQDFIDVVEA
Sbjct: 61  VDIDSEEIQVYIKYFDISLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 120

Query: 125 IFRGAMKGKLIVNCPLPPERIPKYQLFYKDV 155
           IFRGAMKGKLIVNCPLPPERIPKYQL YKD+
Sbjct: 121 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDL 151

[Close]
BLAST of Cucsat.G2789 vs. NCBI nr
Match: KAG6575968.1 (Thioredoxin-like protein 4B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014491.1 Thioredoxin-like protein 4B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 287 bits (734), Expect = 2.51e-97
Identity = 143/151 (94.70%), Postives = 148/151 (98.01%), Query Frame = 0 

Query: 5   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 64
           MSYLLRTLT K EVDS+IRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFAS+AL
Sbjct: 1   MSYLLRTLTTKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 65  VDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 124
           VDIDSEEIQVY+KYFDITLIPSTVFFFNAHHMKMDSGTADHTKW+GAFH+KQDFIDVVEA
Sbjct: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHEKQDFIDVVEA 120

Query: 125 IFRGAMKGKLIVNCPLPPERIPKYQLFYKDV 155
           IFRGAMKGKLIVNCPLPPERIPKYQL YKDV
Sbjct: 121 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 151

[Close]
BLAST of Cucsat.G2789 vs. NCBI nr
Match: XP_022991475.1 (thioredoxin-like protein 4B [Cucurbita maxima] >XP_022991476.1 thioredoxin-like protein 4B [Cucurbita maxima])

HSP 1 Score: 286 bits (732), Expect = 5.07e-97
Identity = 142/151 (94.04%), Postives = 148/151 (98.01%), Query Frame = 0 

Query: 5   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 64
           MSYLLRTLT K EVDS+IRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFAS+AL
Sbjct: 1   MSYLLRTLTTKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 65  VDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 124
           VDIDSEE+QVY+KYFDITLIPSTVFFFNAHHMKMDSGTADHTKW+GAFH+KQDFIDVVEA
Sbjct: 61  VDIDSEELQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHEKQDFIDVVEA 120

Query: 125 IFRGAMKGKLIVNCPLPPERIPKYQLFYKDV 155
           IFRGAMKGKLIVNCPLPPERIPKYQL YKDV
Sbjct: 121 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 151

[Close]
BLAST of Cucsat.G2789 vs. ExPASy TrEMBL
Match: A0A1S3BH38 (thioredoxin-like protein 4B OS=Cucumis melo OX=3656 GN=LOC103489754 PE=3 SV=1)

HSP 1 Score: 289 bits (739), Expect = 2.10e-98
Identity = 145/151 (96.03%), Postives = 150/151 (99.34%), Query Frame = 0 

Query: 5   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 64
           MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFAS+AL
Sbjct: 1   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 65  VDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 124
           VDIDSEE+QVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQ+FIDVVEA
Sbjct: 61  VDIDSEEMQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQNFIDVVEA 120

Query: 125 IFRGAMKGKLIVNCPLPPERIPKYQLFYKDV 155
           IFRGAMKGKLIVNCPLPPE+IPKYQL +KDV
Sbjct: 121 IFRGAMKGKLIVNCPLPPEQIPKYQLLFKDV 151

[Close]
BLAST of Cucsat.G2789 vs. ExPASy TrEMBL
Match: A0A6J1DGN8 (thioredoxin-like protein 4B OS=Momordica charantia OX=3673 GN=LOC111019903 PE=3 SV=1)

HSP 1 Score: 288 bits (736), Expect = 6.02e-98
Identity = 143/151 (94.70%), Postives = 149/151 (98.68%), Query Frame = 0 

Query: 5   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 64
           MSYLLRTLTKK EVDS+IRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFAS+AL
Sbjct: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 65  VDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 124
           VDIDSEEIQVY+KYFDI+LIPSTVFFFNAHHMKMDSGTADHTKW+GAFHQKQDFIDVVEA
Sbjct: 61  VDIDSEEIQVYIKYFDISLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 120

Query: 125 IFRGAMKGKLIVNCPLPPERIPKYQLFYKDV 155
           IFRGAMKGKLIVNCPLPPERIPKYQL YKD+
Sbjct: 121 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDL 151

[Close]
BLAST of Cucsat.G2789 vs. ExPASy TrEMBL
Match: A0A6J1JT18 (thioredoxin-like protein 4B OS=Cucurbita maxima OX=3661 GN=LOC111488081 PE=3 SV=1)

HSP 1 Score: 286 bits (732), Expect = 2.45e-97
Identity = 142/151 (94.04%), Postives = 148/151 (98.01%), Query Frame = 0 

Query: 5   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 64
           MSYLLRTLT K EVDS+IRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFAS+AL
Sbjct: 1   MSYLLRTLTTKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 65  VDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 124
           VDIDSEE+QVY+KYFDITLIPSTVFFFNAHHMKMDSGTADHTKW+GAFH+KQDFIDVVEA
Sbjct: 61  VDIDSEELQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHEKQDFIDVVEA 120

Query: 125 IFRGAMKGKLIVNCPLPPERIPKYQLFYKDV 155
           IFRGAMKGKLIVNCPLPPERIPKYQL YKDV
Sbjct: 121 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 151

[Close]
BLAST of Cucsat.G2789 vs. ExPASy TrEMBL
Match: A0A6J1GQC5 (thioredoxin-like protein 4B OS=Cucurbita moschata OX=3662 GN=LOC111456136 PE=3 SV=1)

HSP 1 Score: 285 bits (729), Expect = 7.04e-97
Identity = 142/151 (94.04%), Postives = 148/151 (98.01%), Query Frame = 0 

Query: 5   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 64
           MSYLLRTLT K EVDS+IRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFAS+AL
Sbjct: 1   MSYLLRTLTTKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 65  VDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 124
           VDIDSEEIQVY+KYFDITLIPSTVFFFNAHHMKMDSGTADHTKW+GAFH+KQDFIDVVEA
Sbjct: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHEKQDFIDVVEA 120

Query: 125 IFRGAMKGKLIVNCPLPPERIPKYQLFYKDV 155
           IFRGAMKGKLIV+CPLPPERIPKYQL YKDV
Sbjct: 121 IFRGAMKGKLIVSCPLPPERIPKYQLLYKDV 151

[Close]
BLAST of Cucsat.G2789 vs. ExPASy TrEMBL
Match: A0A6P4ATD0 (thioredoxin-like protein 4B OS=Ziziphus jujuba OX=326968 GN=LOC107426724 PE=3 SV=1)

HSP 1 Score: 274 bits (700), Expect = 1.86e-92
Identity = 135/151 (89.40%), Postives = 145/151 (96.03%), Query Frame = 0 

Query: 5   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 64
           MSYLL TLTKK EVDS+I+DTIDKVL+LRFGR SDSVCLLLDD+L+K AREVSKFA++AL
Sbjct: 1   MSYLLNTLTKKREVDSIIKDTIDKVLVLRFGRASDSVCLLLDDVLSKSAREVSKFATIAL 60

Query: 65  VDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 124
           VDIDSE++QVYV YFDITLIPST+FFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA
Sbjct: 61  VDIDSEDVQVYVNYFDITLIPSTIFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 120

Query: 125 IFRGAMKGKLIVNCPLPPERIPKYQLFYKDV 155
           IFRGAMKGKLIVNCPLPPERIPKYQL YKDV
Sbjct: 121 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 151

[Close]
BLAST of Cucsat.G2789 vs. TAIR 10
Match: AT3G24730.1 (mRNA splicing factor, thioredoxin-like U5 snRNP )

HSP 1 Score: 257.3 bits (656), Expect = 7.9e-69
Identity = 122/151 (80.79%), Postives = 138/151 (91.39%), Query Frame = 0 

Query: 5   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 64
           MSYLL+TLT K E+D +IRDTID+VL+LRFGR SD+VCL  D+ILAK  R+VSKFA VAL
Sbjct: 9   MSYLLKTLTTKEEIDRVIRDTIDEVLVLRFGRSSDAVCLQHDEILAKSVRDVSKFAKVAL 68

Query: 65  VDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 124
           VD+DSE++QVYVKYFDITL PST+FFFNAHHMK+DSGTADHTKWVGAFH KQDFIDVVEA
Sbjct: 69  VDVDSEDVQVYVKYFDITLFPSTIFFFNAHHMKLDSGTADHTKWVGAFHIKQDFIDVVEA 128

Query: 125 IFRGAMKGKLIVNCPLPPERIPKYQLFYKDV 156
           I+RGAMKGK+IV CP+PPERIPKYQL YKDV
Sbjct: 129 IYRGAMKGKMIVQCPIPPERIPKYQLVYKDV 159

[Close]
BLAST of Cucsat.G2789 vs. TAIR 10
Match: AT5G08290.1 (mRNA splicing factor, thioredoxin-like U5 snRNP )

HSP 1 Score: 87.8 bits (216), Expect = 8.3e-18
Identity = 51/137 (37.23%), Postives = 78/137 (56.93%), Query Frame = 0 

Query: 5   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 64
           MSYLL  L     VD  I    ++++++RFG   D  C+ +D++LA  A  +  FA + L
Sbjct: 1   MSYLLPHLHSGWAVDQSILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60

Query: 65  VDI-DSEEIQVYVKYFDITLIPSTV-FFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVV 124
           VDI +  +     + +D    PSTV FFF   H+ +D GT ++ K   A   KQ+FID++
Sbjct: 61  VDITEVPDFNTMYELYD----PSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDII 120

Query: 125 EAIFRGAMKGKLIVNCP 140
           E ++RGA KG+ +V  P
Sbjct: 121 ETVYRGARKGRGLVIAP 133

The following BLAST results are available for this feature:
BLAST of Cucsat.G2789 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9NX012.4e-4659.60Thioredoxin-like protein 4B OS=Homo sapiens OX=9606 GN=TXNL4B PE=1 SV=1[more]
Q8BUH15.4e-4658.94Thioredoxin-like protein 4B OS=Mus musculus OX=10090 GN=Txnl4b PE=2 SV=2[more]
P838761.2e-1634.81Thioredoxin-like protein 4A OS=Homo sapiens OX=9606 GN=TXNL4A PE=1 SV=1[more]
P838771.2e-1634.81Thioredoxin-like protein 4A OS=Mus musculus OX=10090 GN=Txnl4a PE=1 SV=1[more]
Q9FE621.2e-1637.23Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana OX=3702 GN=YLS8 PE=1 SV=1[more]
BLAST of Cucsat.G2789 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139666.11.35e-101100.00thioredoxin-like protein 4B [Cucumis sativus] >XP_011659173.1 thioredoxin-like p... [more]
XP_008447285.14.34e-9896.03PREDICTED: thioredoxin-like protein 4B [Cucumis melo] >XP_008447286.1 PREDICTED:... [more]
XP_022152114.11.24e-9794.70thioredoxin-like protein 4B [Momordica charantia] >XP_022152121.1 thioredoxin-li... [more]
KAG6575968.12.51e-9794.70Thioredoxin-like protein 4B, partial [Cucurbita argyrosperma subsp. sororia] >KA... [more]
XP_022991475.15.07e-9794.04thioredoxin-like protein 4B [Cucurbita maxima] >XP_022991476.1 thioredoxin-like ... [more]
BLAST of Cucsat.G2789 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BH382.10e-9896.03thioredoxin-like protein 4B OS=Cucumis melo OX=3656 GN=LOC103489754 PE=3 SV=1[more]
A0A6J1DGN86.02e-9894.70thioredoxin-like protein 4B OS=Momordica charantia OX=3673 GN=LOC111019903 PE=3 ... [more]
A0A6J1JT182.45e-9794.04thioredoxin-like protein 4B OS=Cucurbita maxima OX=3661 GN=LOC111488081 PE=3 SV=... [more]
A0A6J1GQC57.04e-9794.04thioredoxin-like protein 4B OS=Cucurbita moschata OX=3662 GN=LOC111456136 PE=3 S... [more]
A0A6P4ATD01.86e-9289.40thioredoxin-like protein 4B OS=Ziziphus jujuba OX=326968 GN=LOC107426724 PE=3 SV... [more]
BLAST of Cucsat.G2789 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G24730.17.9e-6980.79mRNA splicing factor, thioredoxin-like U5 snRNP [more]
AT5G08290.18.3e-1837.23mRNA splicing factor, thioredoxin-like U5 snRNP [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004123Dim1 familySMARTSM01410DIM1_2coord: 8..142
e-value: 4.3E-75
score: 265.5
IPR004123Dim1 familyPFAMPF02966DIM1coord: 8..141
e-value: 7.2E-48
score: 161.7
IPR004123Dim1 familyPIRSFPIRSF017199Dim1coord: 5..148
e-value: 8.3E-49
score: 162.7
IPR004123Dim1 familyPANTHERPTHR12052THIOREDOXIN-LIKE PROTEN 4A, 4Bcoord: 5..154
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 4..144
e-value: 2.4E-47
score: 162.0
NoneNo IPR availablePANTHERPTHR12052:SF4THIOREDOXIN-LIKE PROTEIN 4Bcoord: 5..154
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 11..141

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G2789.T4Cucsat.G2789.T4mRNA
Cucsat.G2789.T1Cucsat.G2789.T1mRNA
Cucsat.G2789.T3Cucsat.G2789.T3mRNA
Cucsat.G2789.T2Cucsat.G2789.T2mRNA
Cucsat.G2789.T8Cucsat.G2789.T8mRNA
Cucsat.G2789.T9Cucsat.G2789.T9mRNA
Cucsat.G2789.T5Cucsat.G2789.T5mRNA
Cucsat.G2789.T6Cucsat.G2789.T6mRNA
Cucsat.G2789.T12Cucsat.G2789.T12mRNA
Cucsat.G2789.T13Cucsat.G2789.T13mRNA
Cucsat.G2789.T10Cucsat.G2789.T10mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0005681 spliceosomal complex
cellular_component GO:0046540 U4/U6 x U5 tri-snRNP complex
cellular_component GO:0005682 U5 snRNP