Cucsat.G2770 (gene) Cucumber (B10) v3

Overview
NameCucsat.G2770
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionPsbP domain-containing protein
Locationctg1041: 1137042 .. 1137823 (-)
RNA-Seq ExpressionCucsat.G2770
SyntenyCucsat.G2770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAGTAGGCTGATTTTGGGTTAAACTTGAAAAAGCATGAAAAAACTCAAAGCACATATGTTTTTGTTTCTTTAATCTCATGAACGAATGGTGGTAAAGTGTAAAGAGATTCAAACCAAAATGATAGTAGCCTCTAATGCCCTCTTCTCCCTTCACATCCACACAAGGTTCAAACACAACCAAGTTTCCTTTTGCAATTTCTACACTCTTCTTCTTCCTCCATTTCCACTCTCCAATTCGTCTCCAGAAATCATCGTTTCTGGTTTCGGATGGGAACCACATTGTTTATCACTAACCCATTCTCCTCCATCTTTCACCATCAATACCTTCCTTCCCCCCATCTCCCTCCTCACCATTTTCTCCCTAAACGGGTCTCCGCCGTCCACGGTGCCCACAACCAAAACCCCATCTCATCTACCGCTTTGAATCGGAGATGGGCTTTGGTTTCCGGTGTTTCCTTGCTTTCTTCCGCGGCTTTGGGGTTGCAAAACGACTGTTTGGCTGCAGTGAAGCAAGGCCTTCTTGCTGGCAGGATTCCCGGGTTGTCTGAACCAGATGAACAGGGTTGGCTTTTGTCATTTCCTTTTCTACTTTACATCTGTCAATCTTCTGGTTGCTCTAATTTGTGGGTTGTCAAACACTTTTGTTCATTCTTCTCTAACTCTATCAATTTTGTTCATGTAGTTTTACTTTTGGAGCGATTTATAGTCTTTCAATATGGTTAAGTTACGAGCATGGATTATGGACTTTCATGTCTTTTAACTTTTGAAAGTATAATATCAGGTTTCTTAAACCTTCATATTTGAGGTCTTTAATATACTCATAAACTTTTTTGCATAAAGTTGAAATTTGATGGACATATCAGATACATAAATGAAAGTCTAGGGACTTATTTTAATGTTCAGTGACTTGTTTGACAAAAATTAAGAAGTCCAAGGACAATTTGTAGCTGAACCTTTAAAATTTGTACATTGAAGAATACAGATGCCATGTATACTTTTCGTTGCCATTTAATTGAATACTTAGTGAATCAATATATATTCACAAAAATGCAGGGGTTGAAATGAAATAAATGAAACAAAGTGTAGAATGTTAAAAACACTATAATACGAAGACTAGAGTTAGTTAATATAACCTTTTCTTCGTTGGGCTATAGCTGAATCTCTGCAGTAAGAAAACAAACGGAGCTGTTCATGTCATCTTTTCTATATCAACTCACATAGGCCATTGTCTTTCTGTTTTGCTAGCGCAGGAATTTCTTGTGCCAAACATACAAAAATGTTAAGTTCTTGAATAAAAATATGTCCAGCAAATTTCATTTTGACCATTGGATGCTTTGAACTGCTTTCCCTTTCATCTCAAGCTTAGCATATCTGGTTTCTTGTTTGTTGCCTGCTCAGACAGGTTGGAGGACATATCGTAGACCCGACGAGAAGTCTGGTGGGCATGGAGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCACAAGACTGGGAAGAGGTAAATGCTGCTTGATATTCCTCTTTTAAGTTTTAACCTAACTAAAGATGATGATGAAGACCTACAAAAGAAACAAATGGCTTCTACCTCAAACAGTTTCTTCATCAGATTAGAGAAACTAATGAAACTTGACCAACCATTTAAACTAATAAGATATTAACCTGGATTGTTAGGCAGTTGCTTTGAGTGGTTTTGAGTCTCCACGCTGAAGGATGACTTAATTGGTGGCCATCCACTAAGAATATTAAAATTGAACGAGTTTCTTGACAGTTAAAAGAAAACCAACAATTATCTTTGGAATCTGTGACACATCCTTGTTGACTAGAGGAGTAGAGTGATGCCTGTATATATAAACATGGTAAAGAAAGATCCAATGGTATCTATTTCCAGTTTATATCTCTGCCTGGAATTAAAATTTGTCATTCTAATTGGATATCTCCATGCAAGTTAATTTCACGTTCATTTTGATTAAAGAAAGACATGCAACAATGGACATGAGACAATGTGCTTTTGTGTTGCAGGTTCCGGTGTCAATTGCTGATCTTGGTGGGACAGAGATTGATCTCAGGTTCGGAAGCTTGAAGGAAGGTCGGGTGTTTGTAGTCGTTGCGCCTGTTCGTCGGTTTTCCGATGGTGCATTTCCCCAAAACTTTATGCTTCTTGTTCAGCTTTCCATTTCAATATACTGCCACCTCTCACTCTTCTGAGATCTGACTTTGTTATTGTTTTGTGAAGTTATCGGCGAGGATGCAACCATTGAAATGGTTGGACCTCCAGAGAAAGTAATCAATGCATTTGGACCAGAAGTGATAGGAGAAAACGTAGAAGGAAAGGTGATCAGCATGAGCGTGGCGGAGCATTCTGGAAGAACATATTATCAGTTTGAATTGGAGCCTCCTCATGTTATAATCACAGCGACAGCGGCAGGAAATCGTCTCTACCTATTCAATGTAACAGCAAATGGTAAGAGCCTACAAAGAACACCTTGTTTATATGATATGAGTTAAAATCATATAAGAAATCAATTGTTTTCCATTAGAACTAAAGAAAGTTTTTTTCTTGGTTTCTTATAGGCCTTCAATGGAAGAGACACTACAATGACTTGAAAAGGATTGCGGATTCGTTTCGCATAGTGTGATGAAGTTGTTCCAAAACTAGTTATAGTATGCATATACATTTTGATTTACAGGAGAAATAGTTGGTCGAAGCCTTAAGGTTTTTGTTTGATTGATTGGCTTTGCATTACCATATGTTTATACTTCTGCTTGATGGAGGAGACATGACCTTGATATATTGAGTCGTAGTTGTATCGACATGACAGAATTAATATCATCGTGTAAAGTAATTGAAATTGAAGGGTTGATGAAAATATATAATTTTTAGGCCAATGATATATAAGAACAACGTTAGAGAGTTA

Coding sequence (CDS)

ATGGGAACCACATTGTTTATCACTAACCCATTCTCCTCCATCTTTCACCATCAATACCTTCCTTCCCCCCATCTCCCTCCTCACCATTTTCTCCCTAAACGGGTCTCCGCCGTCCACGGTGCCCACAACCAAAACCCCATCTCATCTACCGCTTTGAATCGGAGATGGGCTTTGGTTTCCGGTGTTTCCTTGCTTTCTTCCGCGGCTTTGGGGTTGCAAAACGACTGTTTGGCTGCAGTGAAGCAAGGCCTTCTTGCTGGCAGGATTCCCGGGTTGTCTGAACCAGATGAACAGGGTTGGCTTTTGTCATTTCCTTTTCTACTTTACATCTGTCAATCTTCTGGTTGCTCTAATTTGTGGGTTGTCAAACACTTTTGTTCATTCTTCTCTAACTCTATCAATTTTGTTCATGTAGTTTTACTTTTGGAGCGATTTATAGTCTTTCAATATGGTTAA

Protein sequence

MGTTLFITNPFSSIFHHQYLPSPHLPPHHFLPKRVSAVHGAHNQNPISSTALNRRWALVSGVSLLSSAALGLQNDCLAAVKQGLLAGRIPGLSEPDEQGWLLSFPFLLYICQSSGCSNLWVVKHFCSFFSNSINFVHVVLLLERFIVFQYG
Homology
[Close]
BLAST of Cucsat.G2770 vs. ExPASy Swiss-Prot
Match: O49292 (PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD4 PE=1 SV=2)

HSP 1 Score: 167.9 bits (424), Expect = 5.9e-41
Identity = 78/96 (81.25%), Postives = 85/96 (88.54%), Query Frame = 0 

Query: 9   IGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMSVAEHSGRTYYQFELEPPHVIITA 68
           +G+D  IE +G P KVINAFGPEVIGENVEGKV+S +VAEH GR YYQFELEPPHV+ITA
Sbjct: 165 LGDDVKIENIGQPAKVINAFGPEVIGENVEGKVLSSNVAEHDGRLYYQFELEPPHVLITA 224

Query: 69  TAAGNRLYLFNVTANGLQWKRHYNDLKRIADSFRIV 105
           TAAGNRLYLF+VT NGLQWKRHY DLKRIA SFRIV
Sbjct: 225 TAAGNRLYLFSVTGNGLQWKRHYKDLKRIASSFRIV 260

[Close]
BLAST of Cucsat.G2770 vs. ExPASy Swiss-Prot
Match: Q9LXX5 (PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD6 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.4e-10
Identity = 37/99 (37.37%), Postives = 58/99 (58.59%), Query Frame = 0 

Query: 12  DATIEMVGPPEKVINAFGPEVIGENVEG-KVISMSVAEHSGRTYYQFELEPP------HV 71
           +ATIE +G PEKVI + GP V G + +  +++  S+ +   +TYY++ LE P      H 
Sbjct: 164 NATIEDLGEPEKVIASLGPFVTGNSYDSDELLKTSIEKIGDQTYYKYVLETPFALTGSHN 223

Query: 72  IITATAAGNRLYLFNVTANGLQWKRHYNDLKRIADSFRI 104
           +  ATA G+ + LF V+A   QW+     L+ I DSF++
Sbjct: 224 LAKATAKGSTVVLFVVSATEKQWQSSQKTLEAILDSFQL 262

[Close]
BLAST of Cucsat.G2770 vs. NCBI nr
Match: XP_011659134.1 (psbP domain-containing protein 4, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 203 bits (517), Expect = 7.68e-65
Identity = 104/119 (87.39%), Postives = 104/119 (87.39%), Query Frame = 0 

Query: 1   RFGSLKE---------------VIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS 60
           RFGSLKE               VIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS
Sbjct: 55  RFGSLKEGRVFVVVAPVRRFSDVIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS 114

Query: 61  VAEHSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYNDLKRIADSFRIV 104
           VAEHSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYNDLKRIADSFRIV
Sbjct: 115 VAEHSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYNDLKRIADSFRIV 173

[Close]
BLAST of Cucsat.G2770 vs. NCBI nr
Match: XP_004139653.1 (psbP domain-containing protein 4, chloroplastic isoform X1 [Cucumis sativus] >KGN44513.1 hypothetical protein Csa_015810 [Cucumis sativus])

HSP 1 Score: 203 bits (517), Expect = 1.49e-63
Identity = 104/119 (87.39%), Postives = 104/119 (87.39%), Query Frame = 0 

Query: 1   RFGSLKE---------------VIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS 60
           RFGSLKE               VIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS
Sbjct: 149 RFGSLKEGRVFVVVAPVRRFSDVIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS 208

Query: 61  VAEHSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYNDLKRIADSFRIV 104
           VAEHSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYNDLKRIADSFRIV
Sbjct: 209 VAEHSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYNDLKRIADSFRIV 267

[Close]
BLAST of Cucsat.G2770 vs. NCBI nr
Match: XP_008461487.1 (PREDICTED: psbP domain-containing protein 4, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 198 bits (504), Expect = 7.33e-63
Identity = 101/119 (84.87%), Postives = 103/119 (86.55%), Query Frame = 0 

Query: 1   RFGSLKE---------------VIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS 60
           RFGSLKE               VIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS
Sbjct: 55  RFGSLKEGRLFVIVAPVRRFSDVIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS 114

Query: 61  VAEHSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYNDLKRIADSFRIV 104
           VAE+SGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHY DLKRIADSFR+V
Sbjct: 115 VAEYSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYKDLKRIADSFRVV 173

[Close]
BLAST of Cucsat.G2770 vs. NCBI nr
Match: XP_008461486.1 (PREDICTED: psbP domain-containing protein 4, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 198 bits (504), Expect = 1.43e-61
Identity = 101/119 (84.87%), Postives = 103/119 (86.55%), Query Frame = 0 

Query: 1   RFGSLKE---------------VIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS 60
           RFGSLKE               VIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS
Sbjct: 150 RFGSLKEGRLFVIVAPVRRFSDVIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS 209

Query: 61  VAEHSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYNDLKRIADSFRIV 104
           VAE+SGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHY DLKRIADSFR+V
Sbjct: 210 VAEYSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYKDLKRIADSFRVV 268

[Close]
BLAST of Cucsat.G2770 vs. NCBI nr
Match: KAA0037784.1 (psbP domain-containing protein 4 [Cucumis melo var. makuwa] >TYK27307.1 psbP domain-containing protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 198 bits (504), Expect = 1.43e-61
Identity = 101/119 (84.87%), Postives = 103/119 (86.55%), Query Frame = 0 

Query: 1   RFGSLKE---------------VIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS 60
           RFGSLKE               VIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS
Sbjct: 150 RFGSLKEGRLFVIVAPVRRFSDVIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS 209

Query: 61  VAEHSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYNDLKRIADSFRIV 104
           VAE+SGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHY DLKRIADSFR+V
Sbjct: 210 VAEYSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYKDLKRIADSFRVV 268

[Close]
BLAST of Cucsat.G2770 vs. ExPASy TrEMBL
Match: A0A0A0K501 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G322590 PE=4 SV=1)

HSP 1 Score: 203 bits (517), Expect = 7.20e-64
Identity = 104/119 (87.39%), Postives = 104/119 (87.39%), Query Frame = 0 

Query: 1   RFGSLKE---------------VIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS 60
           RFGSLKE               VIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS
Sbjct: 149 RFGSLKEGRVFVVVAPVRRFSDVIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS 208

Query: 61  VAEHSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYNDLKRIADSFRIV 104
           VAEHSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYNDLKRIADSFRIV
Sbjct: 209 VAEHSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYNDLKRIADSFRIV 267

[Close]
BLAST of Cucsat.G2770 vs. ExPASy TrEMBL
Match: A0A1S3CER1 (psbP domain-containing protein 4, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500071 PE=4 SV=1)

HSP 1 Score: 198 bits (504), Expect = 3.55e-63
Identity = 101/119 (84.87%), Postives = 103/119 (86.55%), Query Frame = 0 

Query: 1   RFGSLKE---------------VIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS 60
           RFGSLKE               VIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS
Sbjct: 55  RFGSLKEGRLFVIVAPVRRFSDVIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS 114

Query: 61  VAEHSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYNDLKRIADSFRIV 104
           VAE+SGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHY DLKRIADSFR+V
Sbjct: 115 VAEYSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYKDLKRIADSFRVV 173

[Close]
BLAST of Cucsat.G2770 vs. ExPASy TrEMBL
Match: A0A5A7T2U1 (PsbP domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1784G00200 PE=4 SV=1)

HSP 1 Score: 198 bits (504), Expect = 6.93e-62
Identity = 101/119 (84.87%), Postives = 103/119 (86.55%), Query Frame = 0 

Query: 1   RFGSLKE---------------VIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS 60
           RFGSLKE               VIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS
Sbjct: 150 RFGSLKEGRLFVIVAPVRRFSDVIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS 209

Query: 61  VAEHSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYNDLKRIADSFRIV 104
           VAE+SGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHY DLKRIADSFR+V
Sbjct: 210 VAEYSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYKDLKRIADSFRVV 268

[Close]
BLAST of Cucsat.G2770 vs. ExPASy TrEMBL
Match: A0A1S3CEV2 (psbP domain-containing protein 4, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500071 PE=4 SV=1)

HSP 1 Score: 198 bits (504), Expect = 6.93e-62
Identity = 101/119 (84.87%), Postives = 103/119 (86.55%), Query Frame = 0 

Query: 1   RFGSLKE---------------VIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS 60
           RFGSLKE               VIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS
Sbjct: 150 RFGSLKEGRLFVIVAPVRRFSDVIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS 209

Query: 61  VAEHSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYNDLKRIADSFRIV 104
           VAE+SGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHY DLKRIADSFR+V
Sbjct: 210 VAEYSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYKDLKRIADSFRVV 268

[Close]
BLAST of Cucsat.G2770 vs. ExPASy TrEMBL
Match: A0A6J1DKA3 (psbP domain-containing protein 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111021699 PE=4 SV=1)

HSP 1 Score: 195 bits (496), Expect = 8.63e-61
Identity = 98/119 (82.35%), Postives = 102/119 (85.71%), Query Frame = 0 

Query: 1   RFGSLKE---------------VIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMS 60
           RFGS KE               VIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVI+M+
Sbjct: 141 RFGSSKEGRLFVIVAPVRRFSDVIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVINMN 200

Query: 61  VAEHSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYNDLKRIADSFRIV 104
           VAEHSGRTYYQFELEPPHV+ITATAAGNRLYLFNVTANGLQWKRHY DLKRIADSFR+V
Sbjct: 201 VAEHSGRTYYQFELEPPHVLITATAAGNRLYLFNVTANGLQWKRHYGDLKRIADSFRVV 259

[Close]
BLAST of Cucsat.G2770 vs. TAIR 10
Match: AT1G77090.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein )

HSP 1 Score: 167.9 bits (424), Expect = 4.2e-42
Identity = 78/96 (81.25%), Postives = 85/96 (88.54%), Query Frame = 0 

Query: 9   IGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMSVAEHSGRTYYQFELEPPHVIITA 68
           +G+D  IE +G P KVINAFGPEVIGENVEGKV+S +VAEH GR YYQFELEPPHV+ITA
Sbjct: 165 LGDDVKIENIGQPAKVINAFGPEVIGENVEGKVLSSNVAEHDGRLYYQFELEPPHVLITA 224

Query: 69  TAAGNRLYLFNVTANGLQWKRHYNDLKRIADSFRIV 105
           TAAGNRLYLF+VT NGLQWKRHY DLKRIA SFRIV
Sbjct: 225 TAAGNRLYLFSVTGNGLQWKRHYKDLKRIASSFRIV 260

[Close]
BLAST of Cucsat.G2770 vs. TAIR 10
Match: AT3G56650.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein )

HSP 1 Score: 66.2 bits (160), Expect = 1.7e-11
Identity = 37/99 (37.37%), Postives = 58/99 (58.59%), Query Frame = 0 

Query: 12  DATIEMVGPPEKVINAFGPEVIGENVEG-KVISMSVAEHSGRTYYQFELEPP------HV 71
           +ATIE +G PEKVI + GP V G + +  +++  S+ +   +TYY++ LE P      H 
Sbjct: 164 NATIEDLGEPEKVIASLGPFVTGNSYDSDELLKTSIEKIGDQTYYKYVLETPFALTGSHN 223

Query: 72  IITATAAGNRLYLFNVTANGLQWKRHYNDLKRIADSFRI 104
           +  ATA G+ + LF V+A   QW+     L+ I DSF++
Sbjct: 224 LAKATAKGSTVVLFVVSATEKQWQSSQKTLEAILDSFQL 262

The following BLAST results are available for this feature:
BLAST of Cucsat.G2770 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O492925.9e-4181.25PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 ... [more]
Q9LXX52.4e-1037.37PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Cucsat.G2770 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011659134.17.68e-6587.39psbP domain-containing protein 4, chloroplastic isoform X2 [Cucumis sativus][more]
XP_004139653.11.49e-6387.39psbP domain-containing protein 4, chloroplastic isoform X1 [Cucumis sativus] >KG... [more]
XP_008461487.17.33e-6384.87PREDICTED: psbP domain-containing protein 4, chloroplastic isoform X2 [Cucumis m... [more]
XP_008461486.11.43e-6184.87PREDICTED: psbP domain-containing protein 4, chloroplastic isoform X1 [Cucumis m... [more]
KAA0037784.11.43e-6184.87psbP domain-containing protein 4 [Cucumis melo var. makuwa] >TYK27307.1 psbP dom... [more]
BLAST of Cucsat.G2770 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5017.20e-6487.39PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G322590 PE=4 S... [more]
A0A1S3CER13.55e-6384.87psbP domain-containing protein 4, chloroplastic isoform X2 OS=Cucumis melo OX=36... [more]
A0A5A7T2U16.93e-6284.87PsbP domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3CEV26.93e-6284.87psbP domain-containing protein 4, chloroplastic isoform X1 OS=Cucumis melo OX=36... [more]
A0A6J1DKA38.63e-6182.35psbP domain-containing protein 4, chloroplastic OS=Momordica charantia OX=3673 G... [more]
BLAST of Cucsat.G2770 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G77090.14.2e-4281.25Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein [more]
AT3G56650.11.7e-1137.37Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002683PsbP, C-terminalPFAMPF01789PsbPcoord: 32..140
e-value: 1.2E-9
score: 38.4
NoneNo IPR availableGENE3D3.40.1000.10Mog1/PsbP, alpha/beta/alpha sandwichcoord: 6..140
e-value: 2.3E-21
score: 78.4
NoneNo IPR availablePANTHERPTHR31407FAMILY NOT NAMEDcoord: 7..141
NoneNo IPR availablePANTHERPTHR31407:SF38PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTICcoord: 7..141
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 15..140

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G2770.T2Cucsat.G2770.T2mRNA
Cucsat.G2770.T1Cucsat.G2770.T1mRNA
Cucsat.G2770.T3Cucsat.G2770.T3mRNA
Cucsat.G2770.T4Cucsat.G2770.T4mRNA
Cucsat.G2770.T6Cucsat.G2770.T6mRNA
Cucsat.G2770.T9Cucsat.G2770.T9mRNA
Cucsat.G2770.T7Cucsat.G2770.T7mRNA
Cucsat.G2770.T8Cucsat.G2770.T8mRNA
Cucsat.G2770.T11Cucsat.G2770.T11mRNA
Cucsat.G2770.T12Cucsat.G2770.T12mRNA
Cucsat.G2770.T10Cucsat.G2770.T10mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015979 photosynthesis
cellular_component GO:0009507 chloroplast
cellular_component GO:0019898 extrinsic component of membrane
cellular_component GO:0009654 photosystem II oxygen evolving complex
cellular_component GO:0009523 photosystem II
molecular_function GO:0005509 calcium ion binding