Cucsat.G2492 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G2492
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like
Location	ctg1002: 5868577 .. 5872341 (+)
RNA-Seq Expression	Cucsat.G2492
Synteny	Cucsat.G2492

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATGAGGAGGAGAGGGAAAAAAAATAAAAAAAAAAAAGAAAGAAAGAAAGAAAGGAACAAAAGCAGCTTGAATGGGGCCCATAAAATGTCCTCTCAAAAGACCCCCAGATGTGATTTTAATCTTTCTTCTACTGCACTAACATAATTAATTTTCGATTTTATGATTTCCATTTTTTTTTTTATCAAAAAAATAATAAAAATAAAATTGGGGTTGTCGTTTCGATCTTATTTGGTCGCCAAATCTTCCCCAAAATTCTCTCTTCCATAATCATGTTAGGCGAGAGAGCAATCTGTGAAGGGTCGTCATCTGGATTGGCCATCACCGCCGATCAACAGCAGCAACAACAACAGGCAGGTCAGGCACAGGCGGGTACGGGTGCGGGTGTTCCTTTGAGCCGTTACGAATCACAAAAGCGGCGAGATTGGAACACTTTTGGGCAATATCTAAAAAACCAAACACCCCCCGTATCGCTATCTCACTGTAACTGTAACCATGTACTTGAATTCCTTCGATACCTTGACCAATTTGGTAAAACAAGAGTTCATTCACATGGTTGTGTGTTCTTCGGTCAGCCTGACCCTCCTGCTCCCTGCCCTTGCCCTTTGAAACAAGCTTGGGGTAGCCTTGACGCACTCATCGGCCGCCTCCGCGCAGCCTACGAGGAGCACGGTGGCTCCCCTGAAGGAAACCCTTTTGGAAATGGAGCAATTAGAACGTATTTAAGAGAGGTGAAGGAGAGCCAAGCCAAGGCCAGAGGAATCCCCTACAAAAAGAAGAAGAAGAAGAGAAATAATCAGATGATGATGATGAATAATACGAACAAGCAGCAGCAGCTGCTGCAGCAACTCCCCAATGATAATAATGATACCAACGCTCCTTTGACTCACATCCCTTGATTTTTCAATCCATTTCCATGGTAATTAATTACAATCCCTTCCTTTTTATTCTTCTATATATTATTATTTTTCGCTTCTTCGAAAATTATATATATTACTGTTTTTGTTGGATTTTGAATTTGGAATTATATGAGAGTAGTAAGTTCGTGAGTGAATTATATTTTTATATATTAAGGAGATGGGTTGATTATTGGAGAATTATGATGACTGATATTAATTCATGATCAACATCATTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTAGACCAAGTTTTCACAAAACCCTAATTTTGATCGTAGTTACACCATTTAGAAAATGTATGAATTATGAGAAATAATTGTGTGTTAAGATTAAGAAGAGATGATATATATTGGTATGTAGATGGTTTTAATTTGAGTGTGAAGAATCAGAAAAATAGCTTTGATTGGTGTGCCATTCAGTGTCTGGAAAAACCACTGTTTGGTTTGATGTCCCTTAGTTTAATAAAATAAAATAAAATAATTAAAATAGGTAACCAAAAATGTTTTACTTTTCAATAGATTTGGGCCTTTTTCGATTCTATACGATTTTTTTGCTCCCCATGCATGGACATTCCCATATCCCACCATCTCTATATCATCACCATCATCATCATCTTTTTAATATTTCTTTATATATCATTATCAAAATTATTTTCAATTTTACTATTTCTTTTTTATAATTGTTGTTTTCCTACTCTCTTACTTCTTTCCTTCGGTACTTGTTGAATTTTATCCTATTTCTTCCTTATATTACTCCTTATATCAATTAATACCATTATATAATGTCTCAACCCCTTCTAAACTTTTCATTTCTTTTCTTATTTTATCTCTTCAAACAAGCATTCATCACTGTCATATGCTTGTTATCTAATGGACTATATATTGATATTAATTGACATTTTCTTTTTAAAAAATCATATTAACAGAGATATACACATACTGTATTTACTGTTATAAAATTTTAGAACATATTGAGGACATTTTCAAACATATCAACAAATTAAAACTAATGCACATTTTAGTTTTTTTTTTTTTTTTTTTTGCCATATAAAAAAATGCATAGATATAAAACTAGATCTTATGTATTGGAAAATTATATTGAATTGATTTTGTTCACCCTCTCTCTTGTTTGGATTTCTTATACAAAACTGTAAACAGTTTGCCGAAATTTTGGTAGTTCCAAAATATTCGATAGTATTTTTATGACAAAGTTATAATTTATATTACTGTTCTCTATATGTAAATGATCTTAATAGAGATATGGAAGAAAAGTTTATCATGTTAACTCATTTCCAATTTTTTGAAGAAAAGAAAATGTATTGACGTTTAAAAATTATATAGGGATTTTTTTTGGTAATTATATACTGAATTAGTAGGACAGGTCCAAGTTGATTTACGTACAAAATTTAATTAGACTGTTTGAGTTTACTCTAATTAATTACTGGTGTACTTTCTCACTAATCTTCAAATTTCAAATGAAATTAATTAAATTTCTATTTATAGCTCTCCATTTATGTAGGTGGGAGTCCAAACTCCTCTACTATTTCTCTCCATTTGATGTATCCACTGGAATGAGGAGTCCAATGGAAATTCAAACATTTTTTTCATTTTCCCCCCATCTTCTTAGTTTGAATAAAATTGAAAGTATTTTGAAAACATATCTAAACTGTAGATTATATAATCTAGAATTTTCATGTAAATAAATTTGCAATATTAACTCAAAAGTCCCTCTTTTAAAATGTCATTTATGTTTTTGGATTTGATTTATCAATCGTGGGGTTTGTTTCTGATTTTACTCTGCTTATAGCTTAAGAGAAGGAAATTAATCTTTTTATTCTTATACTATTTTCACATCTAACTAGTTCTTTTCTGTGTTTTAAGAACGTTATGTTTAATAATTAAGGTATATAACCTAATGGAGATTAACGAATAAAAATGTTAGAATATTACATACCCTTTCAAGATATCAAACAACATCAATATTCACCTACACCTAAACTTGTCCTTTGTTATATTTCTATATGATCTGAGTTTGAAAAGAATTATTTCTGATATATATAATAATGCGGCATACCGAGAATTTGACAAATCGTATAGTGTTATTGTATTAATATAATCTTTTTGCTGTCACATATCCACTAATAATATCAATACAAACTTATTTTGTTATTGTGTGTATCAAAATGGTATAAAATGGCCATTTGAAATTGCTTGCCACTTCACTTGGTTTTGTATTGCAATTATATTAAATGAAATAATTTGTCATCAATTCCCAATTGCTACTTAATATTTCCTTAATTAGTCAATGGAAGCACTATATCTTTATTGGGTAATGGCTAAACCTATTTAAGGTTATCATGTTAATTAGTGATGAATTTAAAGTCTGAATTGAAAATTTTCTTCTTCTTCTTCTTTGGCAGGAATTGAAGGAAGGAAGAGATGTGGATTTAATGGACTGATGGAAGGGGAAGAGAGATGGAGAATATTGGCGAAAATTAAAGAAACAAAAATGTGGATTATTGCTTTCTGAAATATACGGTGTTGGGAGTTGTGCAGAGGATTTAATTTATATGGGTAGCCTAGCTAGCTATAATTCTGGTTATGAATAATCTATAATATTGAGGCAGCATAATTATAATTAGATGGCCCTTATTAAATTCTATATATATATATATATATGTCGTAGCATTGTCATACAATCTTAGGCACCTTTTTTTCTATTAGGGTAAAGCAAACAATTTCTATTGTCTTTTACTGATTGAAAATTTCAATTTAGAAGAGAGAAAGAACATCATGATTTTATATATTGAGGTGTAAATATTAATATATAATTATAGGT

Coding sequence (CDS)

ATGTTAGGCGAGAGAGCAATCTGTGAAGGGTCGTCATCTGGATTGGCCATCACCGCCGATCAACAGCAGCAACAACAACAGGCAGGTCAGGCACAGGCGGGTACGGGTGCGGGTGTTCCTTTGAGCCGTTACGAATCACAAAAGCGGCGAGATTGGAACACTTTTGGGCAATATCTAAAAAACCAAACACCCCCCGTATCGCTATCTCACTGTAACTGTAACCATGTACTTGAATTCCTTCGATACCTTGACCAATTTGGTAAAACAAGAGTTCATTCACATGGTTGTGTGTTCTTCGGTCAGCCTGACCCTCCTGCTCCCTGCCCTTGCCCTTTGAAACAAGCTTGGGGTAGCCTTGACGCACTCATCGGCCGCCTCCGCGCAGCCTACGAGGAGCACGGTGGCTCCCCTGAAGGAAACCCTTTTGGAAATGGAGCAATTAGAACGTATTTAAGAGAGGTGAAGGAGAGCCAAGCCAAGGCCAGAGGAATCCCCTACAAAAAGAAGAAGAAGAAGAGAAATAATCAGATGATGATGATGAATAATACGAACAAGCAGCAGCAGCTGCTGCAGCAACTCCCCAATGATAATAATGATACCAACGCTCCTTTGACTCACATCCCTTGA

Protein sequence

MLGERAICEGSSSGLAITADQQQQQQQAGQAQAGTGAGVPLSRYESQKRRDWNTFGQYLKNQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSLDALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRNNQMMMMNNTNKQQQLLQQLPNDNNDTNAPLTHIP

Homology

[Close]

BLAST of Cucsat.G2492 vs. ExPASy Swiss-Prot
Match: Q9S7R3 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=LSH10 PE=1 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 3.4e-64
Identity = 112/141 (79.43%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 33  AGTGAGVPLSRYESQKRRDWNTFGQYLKNQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVH 92
           +G+   V  SRYESQKRRDWNTFGQYLKNQ PPV +SHC+CNHVL+FLRYLDQFGKT+VH
Sbjct: 15  SGSEPPVTPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVH 74

Query: 93  SHGCVFFGQPDPPAPCPCPLKQAWGSLDALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLR 152
             GC+F+GQP+PPAPC CPL+QAWGSLDALIGRLRAAYEE+GG PE NPF +GAIR YLR
Sbjct: 75  VPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYLR 134

Query: 153 EVKESQAKARGIPYKKKKKKR 174
           EV+E QAKARGIPYKKKKKK+
Sbjct: 135 EVRECQAKARGIPYKKKKKKK 155

[Close]

BLAST of Cucsat.G2492 vs. ExPASy Swiss-Prot
Match: A2YG32 (Protein G1-like2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_24078 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.6e-58
Identity = 105/146 (71.92%), Postives = 121/146 (82.88%), Query Frame = 0


Query: 29  GQAQAGTGAGVPL-SRYESQKRRDWNTFGQYLKNQTPPVSLSHCNCNHVLEFLRYLDQFG 88
           G +  G G   P  SRYESQKRRDW+TFGQYL+N  PP+ LS C+  HVLEFLRYLDQFG
Sbjct: 7   GDSSGGGGGEAPRPSRYESQKRRDWHTFGQYLRNHRPPLELSRCSGAHVLEFLRYLDQFG 66

Query: 89  KTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSLDALIGRLRAAYEEHGGSPEGNPFGNGAI 148
           KT+VH+ GC FFG P PPAPCPCPL+QAWGSLDAL+GRLRAA+EEHGG PE NPFG  A+
Sbjct: 67  KTKVHAAGCPFFGHPSPPAPCPCPLRQAWGSLDALVGRLRAAFEEHGGRPEANPFGARAV 126

Query: 149 RTYLREVKESQAKARGIPYKKKKKKR 174
           R YLREV++SQAKARGI Y+KK++KR
Sbjct: 127 RLYLREVRDSQAKARGIAYEKKRRKR 152

[Close]

BLAST of Cucsat.G2492 vs. ExPASy Swiss-Prot
Match: Q652I1 (Protein G1-like2 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L2 PE=1 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.6e-58
Identity = 105/146 (71.92%), Postives = 121/146 (82.88%), Query Frame = 0


Query: 29  GQAQAGTGAGVPL-SRYESQKRRDWNTFGQYLKNQTPPVSLSHCNCNHVLEFLRYLDQFG 88
           G +  G G   P  SRYESQKRRDW+TFGQYL+N  PP+ LS C+  HVLEFLRYLDQFG
Sbjct: 7   GDSSGGGGGEAPRPSRYESQKRRDWHTFGQYLRNHRPPLELSRCSGAHVLEFLRYLDQFG 66

Query: 89  KTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSLDALIGRLRAAYEEHGGSPEGNPFGNGAI 148
           KT+VH+ GC FFG P PPAPCPCPL+QAWGSLDAL+GRLRAA+EEHGG PE NPFG  A+
Sbjct: 67  KTKVHAAGCPFFGHPSPPAPCPCPLRQAWGSLDALVGRLRAAFEEHGGRPEANPFGARAV 126

Query: 149 RTYLREVKESQAKARGIPYKKKKKKR 174
           R YLREV++SQAKARGI Y+KK++KR
Sbjct: 127 RLYLREVRDSQAKARGIAYEKKRRKR 152

[Close]

BLAST of Cucsat.G2492 vs. ExPASy Swiss-Prot
Match: Q9SN52 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 OS=Arabidopsis thaliana OX=3702 GN=LSH9 PE=1 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.8e-58
Identity = 105/142 (73.94%), Postives = 121/142 (85.21%), Query Frame = 0


Query: 40  PLSRYESQKRRDWNTFGQYLKNQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFF 99
           PLSRYESQKRRDWNTF QYLK+Q PP+ +S  +  HVL FLRYLDQFGKT+VH   CVFF
Sbjct: 34  PLSRYESQKRRDWNTFVQYLKSQNPPLMMSQFDYTHVLSFLRYLDQFGKTKVHHQACVFF 93

Query: 100 GQPDPPAPCPCPLKQAWGSLDALIGRLRAAYEEH-GGSPEGNPFGNGAIRTYLREVKESQ 159
           GQPDPP PC CPLKQAWGSLDALIGRLRAAYEEH GGSP+ NPF NG+IR +LREV+ESQ
Sbjct: 94  GQPDPPGPCTCPLKQAWGSLDALIGRLRAAYEEHGGGSPDTNPFANGSIRVHLREVRESQ 153

Query: 160 AKARGIPYKKKKKKRNNQMMMM 181
           AKARGIPY+KKK+++    +++
Sbjct: 154 AKARGIPYRKKKRRKTKNEVVV 175

[Close]

BLAST of Cucsat.G2492 vs. ExPASy Swiss-Prot
Match: A2XED8 (Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.8e-58
Identity = 107/150 (71.33%), Postives = 124/150 (82.67%), Query Frame = 0


Query: 28  AGQAQAGTGAGVP---LSRYESQKRRDWNTFGQYLKNQTPPVSLSHCNCNHVLEFLRYLD 87
           AG A A   A  P   LSRYESQKRRDWNTF QYL+N  PP++L+ C+  HV+EFLRYLD
Sbjct: 13  AGGAPAVAAAPQPPAQLSRYESQKRRDWNTFLQYLRNHRPPLTLARCSGAHVIEFLRYLD 72

Query: 88  QFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSLDALIGRLRAAYEEHGGSPEGNPFGN 147
           QFGKT+VH+ GC F+GQP PP PCPCPL+QAWGSLDALIGRLRAAYEE GG+PE NPF  
Sbjct: 73  QFGKTKVHASGCAFYGQPSPPGPCPCPLRQAWGSLDALIGRLRAAYEESGGTPESNPFAA 132

Query: 148 GAIRTYLREVKESQAKARGIPYKKKKKKRN 175
            A+R YLREV++SQAKARGIPY+KKK+KR+
Sbjct: 133 RAVRIYLREVRDSQAKARGIPYEKKKRKRS 162

[Close]

BLAST of Cucsat.G2492 vs. NCBI nr
Match: KGN49306.1 (hypothetical protein Csa_004072 [Cucumis sativus])

HSP 1 Score: 426 bits (1096), Expect = 1.02e-150
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MLGERAICEGSSSGLAITADQQQQQQQAGQAQAGTGAGVPLSRYESQKRRDWNTFGQYLK 60
           MLGERAICEGSSSGLAITADQQQQQQQAGQAQAGTGAGVPLSRYESQKRRDWNTFGQYLK
Sbjct: 1   MLGERAICEGSSSGLAITADQQQQQQQAGQAQAGTGAGVPLSRYESQKRRDWNTFGQYLK 60

Query: 61  NQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSLD 120
           NQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSLD
Sbjct: 61  NQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSLD 120

Query: 121 ALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRNNQMMMM 180
           ALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRNNQMMMM
Sbjct: 121 ALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRNNQMMMM 180

Query: 181 NNTNKQQQLLQQLPNDNNDTNAPLTHIP 208
           NNTNKQQQLLQQLPNDNNDTNAPLTHIP
Sbjct: 181 NNTNKQQQLLQQLPNDNNDTNAPLTHIP 208

[Close]

BLAST of Cucsat.G2492 vs. NCBI nr
Match: KAA0052619.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo var. makuwa] >TYK13209.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo var. makuwa])

HSP 1 Score: 395 bits (1014), Expect = 3.03e-138
Identity = 200/209 (95.69%), Postives = 201/209 (96.17%), Query Frame = 0


Query: 1   MLGERAICEGSSSGLAITADQQQQQQQA-GQAQAGTGAGVPLSRYESQKRRDWNTFGQYL 60
           MLGERAICEGSSSGLAITADQQQQQQQA GQAQ G  A VPLSRYESQKRRDWNTFGQYL
Sbjct: 1   MLGERAICEGSSSGLAITADQQQQQQQAAGQAQPG--AVVPLSRYESQKRRDWNTFGQYL 60

Query: 61  KNQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSL 120
           KNQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSL
Sbjct: 61  KNQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSL 120

Query: 121 DALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRNNQMMM 180
           DALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRNNQ MM
Sbjct: 121 DALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRNNQTMM 180

Query: 181 MNNTNKQQQLLQQLPNDNNDTNAPLTHIP 208
           MNN NKQQQL QQLPN+NNDTNAPLTHIP
Sbjct: 181 MNNMNKQQQL-QQLPNNNNDTNAPLTHIP 206

[Close]

BLAST of Cucsat.G2492 vs. NCBI nr
Match: XP_008465528.1 (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo])

HSP 1 Score: 389 bits (999), Expect = 6.76e-136
Identity = 198/214 (92.52%), Postives = 199/214 (92.99%), Query Frame = 0


Query: 1   MLGERAICEGSSSGLAITADQQQQQQQ------AGQAQAGTGAGVPLSRYESQKRRDWNT 60
           MLGERAICEGSSSGLAITADQQ QQQQ      AGQAQ G  A VPLSRYESQKRRDWNT
Sbjct: 1   MLGERAICEGSSSGLAITADQQHQQQQQQQQQAAGQAQPG--AVVPLSRYESQKRRDWNT 60

Query: 61  FGQYLKNQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQ 120
           FGQYLKNQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQ
Sbjct: 61  FGQYLKNQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQ 120

Query: 121 AWGSLDALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRN 180
           AWGSLDALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRN
Sbjct: 121 AWGSLDALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRN 180

Query: 181 NQMMMMNNTNKQQQLLQQLPNDNNDTNAPLTHIP 208
           NQ MMMNN NKQQ  LQQLPN+NNDTNAPLTHIP
Sbjct: 181 NQTMMMNNMNKQQ--LQQLPNNNNDTNAPLTHIP 210

[Close]

BLAST of Cucsat.G2492 vs. NCBI nr
Match: XP_038881253.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Benincasa hispida])

HSP 1 Score: 361 bits (926), Expect = 7.06e-125
Identity = 186/212 (87.74%), Postives = 189/212 (89.15%), Query Frame = 0


Query: 1   MLGERAICEGSSSGLAITADQQQQQQQAGQAQAGTGAGVPLSRYESQKRRDWNTFGQYLK 60
           MLGER ICEGSSSGLAITADQQQ  Q   Q Q   GAGVPLSRYESQKRRDWNTFGQYLK
Sbjct: 1   MLGERPICEGSSSGLAITADQQQAAQPQTQTQTQVGAGVPLSRYESQKRRDWNTFGQYLK 60

Query: 61  NQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSLD 120
           NQTPPVSLS+CNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQP+PPAPCPCPLKQAWGSLD
Sbjct: 61  NQTPPVSLSNCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPEPPAPCPCPLKQAWGSLD 120

Query: 121 ALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRNNQMMMM 180
           ALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRNNQMMM 
Sbjct: 121 ALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRNNQMMM- 180

Query: 181 NNTNKQQQLLQQLPNDN---NDTNAPLT-HIP 208
              NKQQ     LPN+N   NDTNAPLT HIP
Sbjct: 181 ---NKQQ-----LPNNNSNNNDTNAPLTTHIP 203

[Close]

BLAST of Cucsat.G2492 vs. NCBI nr
Match: XP_023003302.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita maxima] >XP_023003303.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita maxima] >XP_023003304.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita maxima])

HSP 1 Score: 298 bits (763), Expect = 3.16e-100
Identity = 157/207 (75.85%), Postives = 164/207 (79.23%), Query Frame = 0


Query: 1   MLGERAICEGSSSGLAITADQQQQQQQAGQAQAGTGAGVPLSRYESQKRRDWNTFGQYLK 60
           MLG+   CE SSS  A TADQQQQ Q     Q    + VPLSRYESQKRRDWNTFGQYLK
Sbjct: 1   MLGDTPSCEASSSRSA-TADQQQQLQPP--PQPTQPSVVPLSRYESQKRRDWNTFGQYLK 60

Query: 61  NQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSLD 120
           NQTPPV LSHCN NHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSLD
Sbjct: 61  NQTPPVPLSHCNYNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSLD 120

Query: 121 ALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRNNQMMMM 180
           ALIGRLRAAYEE GGSPE NPFGNGAIR YLREVK+ QAKARGIPYKKKKKK+ NQ++  
Sbjct: 121 ALIGRLRAAYEESGGSPEVNPFGNGAIRMYLREVKDCQAKARGIPYKKKKKKKRNQIIK- 180

Query: 181 NNTNKQQQLLQQLPNDNNDTNAPLTHI 207
                         NDNNDTNA LT +
Sbjct: 181 -------------GNDNNDTNAALTQM 190

[Close]

BLAST of Cucsat.G2492 vs. ExPASy TrEMBL
Match: A0A0A0KNK5 (ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G519580 PE=3 SV=1)

HSP 1 Score: 426 bits (1096), Expect = 4.94e-151
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MLGERAICEGSSSGLAITADQQQQQQQAGQAQAGTGAGVPLSRYESQKRRDWNTFGQYLK 60
           MLGERAICEGSSSGLAITADQQQQQQQAGQAQAGTGAGVPLSRYESQKRRDWNTFGQYLK
Sbjct: 1   MLGERAICEGSSSGLAITADQQQQQQQAGQAQAGTGAGVPLSRYESQKRRDWNTFGQYLK 60

Query: 61  NQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSLD 120
           NQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSLD
Sbjct: 61  NQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSLD 120

Query: 121 ALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRNNQMMMM 180
           ALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRNNQMMMM
Sbjct: 121 ALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRNNQMMMM 180

Query: 181 NNTNKQQQLLQQLPNDNNDTNAPLTHIP 208
           NNTNKQQQLLQQLPNDNNDTNAPLTHIP
Sbjct: 181 NNTNKQQQLLQQLPNDNNDTNAPLTHIP 208

[Close]

BLAST of Cucsat.G2492 vs. ExPASy TrEMBL
Match: A0A5A7UGI5 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008220 PE=3 SV=1)

HSP 1 Score: 395 bits (1014), Expect = 1.47e-138
Identity = 200/209 (95.69%), Postives = 201/209 (96.17%), Query Frame = 0


Query: 1   MLGERAICEGSSSGLAITADQQQQQQQA-GQAQAGTGAGVPLSRYESQKRRDWNTFGQYL 60
           MLGERAICEGSSSGLAITADQQQQQQQA GQAQ G  A VPLSRYESQKRRDWNTFGQYL
Sbjct: 1   MLGERAICEGSSSGLAITADQQQQQQQAAGQAQPG--AVVPLSRYESQKRRDWNTFGQYL 60

Query: 61  KNQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSL 120
           KNQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSL
Sbjct: 61  KNQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSL 120

Query: 121 DALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRNNQMMM 180
           DALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRNNQ MM
Sbjct: 121 DALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRNNQTMM 180

Query: 181 MNNTNKQQQLLQQLPNDNNDTNAPLTHIP 208
           MNN NKQQQL QQLPN+NNDTNAPLTHIP
Sbjct: 181 MNNMNKQQQL-QQLPNNNNDTNAPLTHIP 206

[Close]

BLAST of Cucsat.G2492 vs. ExPASy TrEMBL
Match: A0A1S3CP28 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo OX=3656 GN=LOC103503153 PE=3 SV=1)

HSP 1 Score: 389 bits (999), Expect = 3.27e-136
Identity = 198/214 (92.52%), Postives = 199/214 (92.99%), Query Frame = 0


Query: 1   MLGERAICEGSSSGLAITADQQQQQQQ------AGQAQAGTGAGVPLSRYESQKRRDWNT 60
           MLGERAICEGSSSGLAITADQQ QQQQ      AGQAQ G  A VPLSRYESQKRRDWNT
Sbjct: 1   MLGERAICEGSSSGLAITADQQHQQQQQQQQQAAGQAQPG--AVVPLSRYESQKRRDWNT 60

Query: 61  FGQYLKNQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQ 120
           FGQYLKNQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQ
Sbjct: 61  FGQYLKNQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQ 120

Query: 121 AWGSLDALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRN 180
           AWGSLDALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRN
Sbjct: 121 AWGSLDALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRN 180

Query: 181 NQMMMMNNTNKQQQLLQQLPNDNNDTNAPLTHIP 208
           NQ MMMNN NKQQ  LQQLPN+NNDTNAPLTHIP
Sbjct: 181 NQTMMMNNMNKQQ--LQQLPNNNNDTNAPLTHIP 210

[Close]

BLAST of Cucsat.G2492 vs. ExPASy TrEMBL
Match: A0A6J1KW42 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita maxima OX=3661 GN=LOC111496952 PE=3 SV=1)

HSP 1 Score: 298 bits (763), Expect = 1.53e-100
Identity = 157/207 (75.85%), Postives = 164/207 (79.23%), Query Frame = 0


Query: 1   MLGERAICEGSSSGLAITADQQQQQQQAGQAQAGTGAGVPLSRYESQKRRDWNTFGQYLK 60
           MLG+   CE SSS  A TADQQQQ Q     Q    + VPLSRYESQKRRDWNTFGQYLK
Sbjct: 1   MLGDTPSCEASSSRSA-TADQQQQLQPP--PQPTQPSVVPLSRYESQKRRDWNTFGQYLK 60

Query: 61  NQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSLD 120
           NQTPPV LSHCN NHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSLD
Sbjct: 61  NQTPPVPLSHCNYNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSLD 120

Query: 121 ALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRNNQMMMM 180
           ALIGRLRAAYEE GGSPE NPFGNGAIR YLREVK+ QAKARGIPYKKKKKK+ NQ++  
Sbjct: 121 ALIGRLRAAYEESGGSPEVNPFGNGAIRMYLREVKDCQAKARGIPYKKKKKKKRNQIIK- 180

Query: 181 NNTNKQQQLLQQLPNDNNDTNAPLTHI 207
                         NDNNDTNA LT +
Sbjct: 181 -------------GNDNNDTNAALTQM 190

[Close]

BLAST of Cucsat.G2492 vs. ExPASy TrEMBL
Match: A0A6J1EEZ4 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita moschata OX=3662 GN=LOC111433720 PE=3 SV=1)

HSP 1 Score: 295 bits (755), Expect = 2.62e-99
Identity = 155/208 (74.52%), Postives = 162/208 (77.88%), Query Frame = 0


Query: 1   MLGER-AICEGSSSGLAITADQQQQQQQAGQAQAGTGAGVPLSRYESQKRRDWNTFGQYL 60
           MLG+R   CEGSSS  A    QQQ Q      Q    + VPLSRYESQKRRDWNTFGQYL
Sbjct: 1   MLGDRPGGCEGSSSRSATVDPQQQLQPPPQPTQP---SAVPLSRYESQKRRDWNTFGQYL 60

Query: 61  KNQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSL 120
           KNQTPPV LSHCN NHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSL
Sbjct: 61  KNQTPPVPLSHCNYNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSL 120

Query: 121 DALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRNNQMMM 180
           DALIGRLRAAYEE GGSPE NPFGNGAIR YLREVK+ QAKARGIPYKKKKKK+ NQ++ 
Sbjct: 121 DALIGRLRAAYEESGGSPEVNPFGNGAIRMYLREVKDCQAKARGIPYKKKKKKKRNQIIK 180

Query: 181 MNNTNKQQQLLQQLPNDNNDTNAPLTHI 207
                          NDNNDTNA LT +
Sbjct: 181 --------------GNDNNDTNAALTQM 191

[Close]

BLAST of Cucsat.G2492 vs. TAIR 10
Match: AT2G42610.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 246.1 bits (627), Expect = 2.4e-65
Identity = 112/141 (79.43%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 33  AGTGAGVPLSRYESQKRRDWNTFGQYLKNQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVH 92
           +G+   V  SRYESQKRRDWNTFGQYLKNQ PPV +SHC+CNHVL+FLRYLDQFGKT+VH
Sbjct: 15  SGSEPPVTPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVH 74

Query: 93  SHGCVFFGQPDPPAPCPCPLKQAWGSLDALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLR 152
             GC+F+GQP+PPAPC CPL+QAWGSLDALIGRLRAAYEE+GG PE NPF +GAIR YLR
Sbjct: 75  VPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYLR 134

Query: 153 EVKESQAKARGIPYKKKKKKR 174
           EV+E QAKARGIPYKKKKKK+
Sbjct: 135 EVRECQAKARGIPYKKKKKKK 155

[Close]

BLAST of Cucsat.G2492 vs. TAIR 10
Match: AT2G42610.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 246.1 bits (627), Expect = 2.4e-65
Identity = 112/141 (79.43%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 33  AGTGAGVPLSRYESQKRRDWNTFGQYLKNQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVH 92
           +G+   V  SRYESQKRRDWNTFGQYLKNQ PPV +SHC+CNHVL+FLRYLDQFGKT+VH
Sbjct: 15  SGSEPPVTPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVH 74

Query: 93  SHGCVFFGQPDPPAPCPCPLKQAWGSLDALIGRLRAAYEEHGGSPEGNPFGNGAIRTYLR 152
             GC+F+GQP+PPAPC CPL+QAWGSLDALIGRLRAAYEE+GG PE NPF +GAIR YLR
Sbjct: 75  VPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYLR 134

Query: 153 EVKESQAKARGIPYKKKKKKR 174
           EV+E QAKARGIPYKKKKKK+
Sbjct: 135 EVRECQAKARGIPYKKKKKKK 155

[Close]

BLAST of Cucsat.G2492 vs. TAIR 10
Match: AT4G18610.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 226.5 bits (576), Expect = 2.0e-59
Identity = 105/142 (73.94%), Postives = 121/142 (85.21%), Query Frame = 0


Query: 40  PLSRYESQKRRDWNTFGQYLKNQTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFF 99
           PLSRYESQKRRDWNTF QYLK+Q PP+ +S  +  HVL FLRYLDQFGKT+VH   CVFF
Sbjct: 34  PLSRYESQKRRDWNTFVQYLKSQNPPLMMSQFDYTHVLSFLRYLDQFGKTKVHHQACVFF 93

Query: 100 GQPDPPAPCPCPLKQAWGSLDALIGRLRAAYEEH-GGSPEGNPFGNGAIRTYLREVKESQ 159
           GQPDPP PC CPLKQAWGSLDALIGRLRAAYEEH GGSP+ NPF NG+IR +LREV+ESQ
Sbjct: 94  GQPDPPGPCTCPLKQAWGSLDALIGRLRAAYEEHGGGSPDTNPFANGSIRVHLREVRESQ 153

Query: 160 AKARGIPYKKKKKKRNNQMMMM 181
           AKARGIPY+KKK+++    +++
Sbjct: 154 AKARGIPYRKKKRRKTKNEVVV 175

[Close]

BLAST of Cucsat.G2492 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 224.9 bits (572), Expect = 5.8e-59
Identity = 109/172 (63.37%), Postives = 132/172 (76.74%), Query Frame = 0


Query: 2   LGERAICEGSSSGLAITADQQQQQQQAGQAQAGTGAGVPLSRYESQKRRDWNTFGQYLKN 61
           +G   +   ++  +A  A        +  +  G+G    LSRYE+QKRRDWNTFGQYL+N
Sbjct: 8   MGTTNMSHNTNLMIAAAATTTTTSSSSSSSSGGSGTN-QLSRYENQKRRDWNTFGQYLRN 67

Query: 62  QTPPVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSLDA 121
             PP+SLS C+  HVLEFLRYLDQFGKT+VH+H C FFG P+PPAPC CPL+QAWGSLDA
Sbjct: 68  HRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDA 127

Query: 122 LIGRLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKR 174
           LIGRLRAA+EE+GGSPE NPFG  A+R YLREV++SQAKARGI Y+KKK+KR
Sbjct: 128 LIGRLRAAFEENGGSPETNPFGARAVRLYLREVRDSQAKARGISYEKKKRKR 178

[Close]

BLAST of Cucsat.G2492 vs. TAIR 10
Match: AT1G78815.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 222.2 bits (565), Expect = 3.8e-58
Identity = 111/174 (63.79%), Postives = 129/174 (74.14%), Query Frame = 0


Query: 5   RAICEGSSSGLAITADQQQQQQQAGQAQAGTGAGVPLSRYESQKRRDWNTFGQYLKNQTP 64
           + I EGSS        Q Q Q Q  Q Q+       LSRYESQKRRDWNTF QYL+NQ P
Sbjct: 9   KGIAEGSSQ------PQSQPQPQPHQPQSPPNPPA-LSRYESQKRRDWNTFCQYLRNQQP 68

Query: 65  PVSLSHCNCNHVLEFLRYLDQFGKTRVHSHGCVFFGQPDPPAPCPCPLKQAWGSLDALIG 124
           PV +S C  NH+L+FL+YLDQFGKT+VH HGCVFFGQ +P   C CPLKQAWGSLDALIG
Sbjct: 69  PVHISQCGSNHILDFLQYLDQFGKTKVHIHGCVFFGQVEPAGQCNCPLKQAWGSLDALIG 128

Query: 125 RLRAAYEEHGGSPEGNPFGNGAIRTYLREVKESQAKARGIPYKKKKKKRNNQMM 179
           RLRAA+EE+GG PE NPF  G IR +LREV++SQAKARG+PYKK+KK++    M
Sbjct: 129 RLRAAFEENGGLPERNPFAGGGIRVFLREVRDSQAKARGVPYKKRKKRKKRNPM 175

The following BLAST results are available for this feature:

BLAST of Cucsat.G2492 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7R3	3.4e-64	79.43	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]
A2YG32	1.6e-58	71.92	Protein G1-like2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_24078 PE=3 SV=1	[more]
Q652I1	1.6e-58	71.92	Protein G1-like2 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L2 PE=1 SV=1	[more]
Q9SN52	2.8e-58	73.94	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
A2XED8	4.8e-58	71.33	Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1	[more]

BLAST of Cucsat.G2492 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN49306.1	1.02e-150	100.00	hypothetical protein Csa_004072 [Cucumis sativus]	[more]
KAA0052619.1	3.03e-138	95.69	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo var. makuwa] >TYK...	[more]
XP_008465528.1	6.76e-136	92.52	PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo]	[more]
XP_038881253.1	7.06e-125	87.74	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Benincasa hispida]	[more]
XP_023003302.1	3.16e-100	75.85	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita maxima] >XP_02300330...	[more]

BLAST of Cucsat.G2492 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNK5	4.94e-151	100.00	ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G519580 PE=3 S...	[more]
A0A5A7UGI5	1.47e-138	95.69	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3CP28	3.27e-136	92.52	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1KW42	1.53e-100	75.85	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1EEZ4	2.62e-99	74.52	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita moschata OX=3662 G...	[more]

BLAST of Cucsat.G2492 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42610.1	2.4e-65	79.43	Protein of unknown function (DUF640)	[more]
AT2G42610.2	2.4e-65	79.43	Protein of unknown function (DUF640)	[more]
AT4G18610.1	2.0e-59	73.94	Protein of unknown function (DUF640)	[more]
AT3G23290.2	5.8e-59	63.37	Protein of unknown function (DUF640)	[more]
AT1G78815.1	3.8e-58	63.79	Protein of unknown function (DUF640)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 40..156 e-value: 3.8E-62 score: 208.1
IPR006936	ALOG domain	PROSITE	PS51697	ALOG	coord: 43..170 score: 78.155563
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..33
None	No IPR available	PANTHER	PTHR31165:SF9	PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6	coord: 5..184
IPR040222	ALOG family	PANTHER	PTHR31165	PROTEIN G1-LIKE2	coord: 5..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G2492.T1	Cucsat.G2492.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005634	nucleus