Cucsat.G2422 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G2422
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	F-box plant-like protein, putative
Location	ctg1002: 4861244 .. 4865577 (+)
RNA-Seq Expression	Cucsat.G2422
Synteny	Cucsat.G2422

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGCCCAATTCTTCTGAAAACTACGAATCTCAGGCAAAGAACAAAAACACCCATTTTGATGGAAAGCAAGGTCGAGATTCCAATGGGTGGAGCGATGAACTTGAGGCTGAAATGAGAGAGGTTGTGGAAATCGTGAAGTCAAACGACGCTGAAGATTACGTTAGGCTTGGGAATTTAGTTTTGAAGGTTAATAAAACATTGGCAATCACAGGTCCTGTTCTCACCGGCATTGCGGCTTTGAGTTCTGCTTTTGTGGGTGATTGGTCATCCACAGGGATGGTGGTGGCCGCGGCGGCAGGATCTTTAGCAGCCGCCGTGAACACATTAGAGCACGGTGGGCAAATAGGGATGGTGTTTGAGATGTATAGGAATACAGCCGGCTTCTTCGGGCTATTGGAAGAATCCATTAGAGGGACACTTGAGGAGAAAGATTGGGAAAAGAGGGAAAATGGTGAAGTGTTCGAAAGGAAGGTTGCTTTGAAATTGGGAAGAAGCTTATCTCAGCTTAGACAATTGGCCTCAAAATCAGCTGCGGCTAGAGAGGAAGGAATTTCCATGGATGAATTTGCCAGCAAGCTCTTTTGATTTTTGATTTTTTATCTTTTATTCTTTTAAAGTTTTAATTCGTTGATTCTTTGAGATGAGAAATGTTGTGTCCATCCAATCATGTAAAAAAAAGTAACGTTATTTGATCAATATACCTAACTATTCTTTGTTTAAGATTTATTTTCTTGTTAAGTAAATATTCGTATCTTTCATACAGATACATGGTCGAACTAGTTTAAACTATGATCACGTTTATGAATCTGAAATAAAAGGTAGGCTAATTATAATGAAATTTTATTAACATATCAATAGTAATAAATATCTATCGCAAATGTAATTAAATTGTTTTATCCGATTATCTAAATATTATGTAAAGCTATACTTTTATGGTTTAGTGTTAATAAATAATTATAATCGTAATCATAACTATAATCATGATCGCATTTTCCAACAGAGTACAATCAAATTCCTTGGTGCCAATCACATTATTGATTTTGATTACATACTTGAAAGTGAGTCCATATTCAAATGATACTCACATTTTATATTATGTTTTAAGTATTGTAAATATAGTCTATATTCAAGTTTGACTATAACTATGATTTTATTGATACAATATGAATGGATAGATTCAAACCACAAACTTCATAATAGTTAACATATGCTTGTTTTCAGTAAAATAAACGTAACAACTTATATCCAATTTGACTACGATTGTACTTATACTAGTACAATATGAATGAAAAGATTCGAACCACAAACTTTATGATAGCTAACATTTACTATATATTGAGGATATTATATCAATAGAAAATTACACGTTCATATTTATTTGAATTTAAGTTTAAATTCATATTCCAAATTTTGGGTAAACTTTTACCACCCACTTATACATATTGATTCAACATTGAATTATATAACCCCATTCAACAAGCTATATCTCATATGGCTCAAAATTAATCAAAGGCTTACCTAGTCTAAGTTTATAATTCAAATTCTTAGACTCATATTTTCATCTCAATATATTTGGGACTTTTAAACTTCCATTTTTGTATTAACCATTTCTCGGTAAAGTAAGGAAGTGGATATGATAAAAAATAACTTAAATATGGTAATATATGAGAATAGAGAATAAAAAATGAAAATTAGAAATTACTTGGATGTACAAGAAAGAGATTATTATTAATGTGATTCACTAATGTAATGGACAATGAATAAATTATTATCAACCGGGTCTAATTATTTGACCAACCATCCATTCAATGTCAATTTAATTGGACCAATTTTTAACATTTAAACAATATATATATATAATAAATTAGGATGTAAAATGAAGTTGATATTAAATTGAAAAAATAAAACCCCAAAGTGATGGCGATCGGTAAGCAAGCACACCACCACAATAGCTTAAGAAAACCGAAAACCAACAATTATTTTAAACCGACAAATTGCGTAAGGTATTGTAAGTTGCATGGACTAATTAAGATATAATACAAATTGTGAAATGTCAACCATAAACGTAGATTCATCTTCTAATACAAACAAATTAATGGTCAAACATATTACTTGTTTGAGCTTCTACGACGTCATGCCTGGGGAGGACCTTGTCCAAGGACACAGCATCATCCTCATAATATAACTCAGTCTCCATTTTATTACTTTACTCCACACTCTCTTTCAACATAATTAAATTAAAAAATAAATACTACAATACTAAAAAATTATCCATTTATACCTAACACTTTTAAGATTGTATCTCTAAAATAACAACAAACCATTACTTATATCAATTTATACTTTAAATTTACATGTGTATAAGAAATATTTTTTATAAATACAAAGGCTAATGAAAATGATTAAATGGATCTTGGTGACGCACAAGCTGAAATGCAAGTGAAAGAACTTAGAAGTATGGTAAGGAAAAATGGAAGATATGAGAGATAATATTTAGCCTAAAAGATCTAAGAGAAAATTTTGAGAGAGATCGGAGATGAAAAGTTGTAGGCATTTAATAAATATGAACGTTTGATATCTTTTTTCTTAAAATACACTTATAATCCTTATAATTTTAAAATCAACCGCACATTCTTGTAAACAATCAAAACATTATATGAAATTTATAAGTGTTAATAGGTTGTTAGTTGGGTTACATTTCTAAAATTATCATTTTAACTTCAAAATAATATTAAACAAACCATATTAAGGATTACCGAAAAGAAAAAAACTCATTGAAATGTGAAGTAAAAGAGAGAAAAAAAAAATCAAGAGTCAAAGATAGAAGCATAGTACATCGTATGTTTGGGTGACCCAATCCAAGATATTTTTAAACAAATGATGAATGATATTAAACATAAAAATGGGGGGAAGGGGAACAAGTCACGATTACGAGTCAAGACAGCCTGCTAGTCAAAGTTTCTTCAAATTCATTTGGCCTATAAAATCAGCTACCATCGTCCATCAAGGTATGCATCCATTTCAATTCATTACAAAAACACTAACCCTCTTATTCCTCTCTTTCCCAAAACTAACAAAAGATTTCAACAATGGCTTCTTTACAATCTTTATCTCTCTTCTCGGCTTCCCATTCTTCAAAAACATCCACTACCAATGCCTCACTTCACATCCCAAAGCTTCCTAATCTCAGAATCTCCGCCCCCAAACTCCCTAAAACTTCCACACCCTCCGTTAAAATAATCGAGCAACTTTGTTTAAACCAACCCATTCTTAATGTTCTTCCTACGGAATCGCCTCTCAAATCACAGCTTCACGCTATCTTAGAAGCCGTAGCCGATCGTGTAGAAATGCACAACAACATTTGCCAACAGCGAGACAATTGGAATTCCCTTTTCCTCAATTCCATCAATATGATAACTCTAACCGCCTCTGCCCTTGCCGCCTCCGCACCCGCCGTCGGATCCCTCGGAGCTCCTCTTTTGGCTCTCAAAGTGTCGTCGGCTCTGCTTTTCTCTGCTGCGACAGGGATGTTGGTGATGGTGAACAAAATTCAACCATCACAATTGGCTGAAGAGCAGCGAAATGCGGCTAGATTGTTTAAGCAGCTCCAAACCCAAATCCAAAGCTTGATTCTTGATGGAGCTCCTACTCAAGTGGACGTCGACTCCGCCATGAAAAAGGTGTTGGCGATCGATAAAGCATACCCACTTCCTTTGCTTGGTGCAATGCTTGAAAAATTCCCCAAGACAGTCGAGCCGGCTTCGTGGTGGCCCAATTCTTCTGAAAATTACGAATCTCAGACGAAGAATGGAAACACCCATTTTGATGGAAAGCAAGATCGAGATTCCAATGGGTGGAGCGTTGAACTCGAGGCCGAAATGAGGGAGGTTGTTGAAATCGTGAAGTCAAAAGACGCCGAAGATTACGTTAGGCTTGGGAATTTAGTTTTGAAGGTTAATAAAACATTGGCAATCACAGGCCCTGTTCTCACCGGCATTGCGGCTTTGAGTTCTGCTTTTGTGGGTGATTGGTCATCCGCAGGGATGGCAGTGGCTGCGGTGGCCGGATCATTAGCAGCCGCCGTGAACGCGTTAGAGCACGGTGGGCAAATTGGGATGGTGTTCGAGATGTATAGGAATAGTGCCGGCTTCTTCGGGCTATTGGAAGAATCCATTAGAGGGACACTTGGGGAGAAAGAATGGGAGAAGAGGGAAAATGGTGAAGTGTTTGAAAGGAAAGTGGCTTTGAAATTGGGAAGAAGCTTATCTCAGCTTAGACAATTGGCCACTAAATCAGCTGCAGCTAGAGAGGAAGGATTTTCCATGGATGAATT

Coding sequence (CDS)

TGGCCCAATTCTTCTGAAAACTACGAATCTCAGGCAAAGAACAAAAACACCCATTTTGATGGAAAGCAAGGTCGAGATTCCAATGGGTGGAGCGATGAACTTGAGGCTGAAATGAGAGAGGTTGTGGAAATCGTGAAGTCAAACGACGCTGAAGATTACGTTAGGCTTGGGAATTTAGTTTTGAAGGTTAATAAAACATTGGCAATCACAGGCCCTGTTCTCACCGGCATTGCGGCTTTGAGTTCTGCTTTTGTGGGTGATTGGTCATCCGCAGGGATGGCAGTGGCTGCGGTGGCCGGATCATTAGCAGCCGCCGTGAACGCGTTAGAGCACGGTGGGCAAATTGGGATGGTGTTCGAGATGTATAGGAATAGTGCCGGCTTCTTCGGGCTATTGGAAGAATCCATTAGAGGGACACTTGGGGAGAAAGAATGGGAGAAGAGGGAAAATGGTGAAGTGTTTGAAAGGAAAGTGGCTTTGAAATTGGGAAGAAGCTTATCTCAGCTTAGACAATTGGCCACTAAATCAGCTGCAGCTAGAGAGGAAGGATTTTCCATGGATGAA

Protein sequence

WPNSSENYESQAKNKNTHFDGKQGRDSNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLVLKVNKTLAITGPVLTGIAALSSAFVGDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIRGTLGEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGFSMDE

Homology

[Close]

BLAST of Cucsat.G2422 vs. ExPASy Swiss-Prot
Match: O65451 (Probable F-box protein At4g22030 OS=Arabidopsis thaliana OX=3702 GN=At4g22030 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-45
Identity = 99/160 (61.88%), Postives = 124/160 (77.50%), Query Frame = 0


Query: 26  DSNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLVLKVNKTLAITGPVLTGIAALSSAFV 85
           ++NGW+ ELE EMREVVE++KS DAE+Y +LGN+ LK+N+ LAI+GPVLTGIAA+SS F+
Sbjct: 257 EANGWNSELEMEMREVVEVIKSRDAEEYEKLGNVALKLNRVLAISGPVLTGIAAVSSGFI 316

Query: 86  GDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIRGTLGEKEW 145
           G  S     VA    SLAA VN LEHGGQ+GMV EMYRNSAGFF L+E++I+        
Sbjct: 317 GHGSGLAGVVATTCASLAAVVNTLEHGGQVGMVVEMYRNSAGFFSLMEDTIK-------T 376

Query: 146 EKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGFS 186
           E+RENG+VFE KVALKLGRSLS+LR LA +S+ +R +G S
Sbjct: 377 ERRENGQVFETKVALKLGRSLSELRDLARRSSLSRFDGSS 409

[Close]

BLAST of Cucsat.G2422 vs. NCBI nr
Match: XP_004134771.3 (probable F-box protein At4g22030 [Cucumis sativus] >KAE8647658.1 hypothetical protein Csa_003076 [Cucumis sativus])

HSP 1 Score: 347 bits (889), Expect = 2.16e-116
Identity = 184/188 (97.87%), Postives = 184/188 (97.87%), Query Frame = 0


Query: 1   WPNSSENYESQAKNKNTHFDGKQGRDSNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLV 60
           WPNSSENYESQ KN NTHFDGKQGRDSNGWS ELEAEMREVVEIVKS DAEDYVRLGNLV
Sbjct: 227 WPNSSENYESQTKNGNTHFDGKQGRDSNGWSVELEAEMREVVEIVKSKDAEDYVRLGNLV 286

Query: 61  LKVNKTLAITGPVLTGIAALSSAFVGDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFE 120
           LKVNKTLAITGPVLTGIAALSSAFVGDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFE
Sbjct: 287 LKVNKTLAITGPVLTGIAALSSAFVGDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFE 346

Query: 121 MYRNSAGFFGLLEESIRGTLGEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAR 180
           MYRNSAGFFGLLEESIRGTLGEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAR
Sbjct: 347 MYRNSAGFFGLLEESIRGTLGEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAR 406

Query: 181 EEGFSMDE 188
           EEGFSMDE
Sbjct: 407 EEGFSMDE 414

[Close]

BLAST of Cucsat.G2422 vs. NCBI nr
Match: XP_004134976.2 (probable F-box protein At4g22030 [Cucumis sativus])

HSP 1 Score: 338 bits (867), Expect = 4.67e-113
Identity = 177/188 (94.15%), Postives = 182/188 (96.81%), Query Frame = 0


Query: 1   WPNSSENYESQAKNKNTHFDGKQGRDSNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLV 60
           WPNSSENYESQAKNKNTHFDGKQGR+SNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLV
Sbjct: 227 WPNSSENYESQAKNKNTHFDGKQGRESNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLV 286

Query: 61  LKVNKTLAITGPVLTGIAALSSAFVGDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFE 120
           LKVNKTLAITGPVLTGIAALSSAFVGDWSS GM VAA AGSLAAAVN LEHGGQIGMVFE
Sbjct: 287 LKVNKTLAITGPVLTGIAALSSAFVGDWSSTGMVVAAAAGSLAAAVNTLEHGGQIGMVFE 346

Query: 121 MYRNSAGFFGLLEESIRGTLGEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAR 180
           MYRN+AGFFGLLEESIRGTL EK+WEKRENGEVFERKVALKLGRSLSQLRQLA+KSAAAR
Sbjct: 347 MYRNTAGFFGLLEESIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLASKSAAAR 406

Query: 181 EEGFSMDE 188
           EEG S+DE
Sbjct: 407 EEGISIDE 414

[Close]

BLAST of Cucsat.G2422 vs. NCBI nr
Match: TYK13033.1 (putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 326 bits (835), Expect = 3.30e-108
Identity = 172/188 (91.49%), Postives = 178/188 (94.68%), Query Frame = 0


Query: 1   WPNSSENYESQAKNKNTHFDGKQGRDSNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLV 60
           WPNSSENYESQ KN+NT+ D KQGR+SNGWSDELEAEMREV EIVKS DAEDYVRLGNLV
Sbjct: 227 WPNSSENYESQTKNENTYLDAKQGRESNGWSDELEAEMREVAEIVKSKDAEDYVRLGNLV 286

Query: 61  LKVNKTLAITGPVLTGIAALSSAFVGDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFE 120
           LKVNK LA +GPVL+GIAALSSAFVGDWSSAGMAVAA AGSLAAAVNALEHGGQIGMVFE
Sbjct: 287 LKVNKILATSGPVLSGIAALSSAFVGDWSSAGMAVAAAAGSLAAAVNALEHGGQIGMVFE 346

Query: 121 MYRNSAGFFGLLEESIRGTLGEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAR 180
           MYRN+AGFFGLLEESIRGTL EKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAR
Sbjct: 347 MYRNTAGFFGLLEESIRGTLEEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAR 406

Query: 181 EEGFSMDE 188
           EEG SMDE
Sbjct: 407 EEGISMDE 414

[Close]

BLAST of Cucsat.G2422 vs. NCBI nr
Match: XP_038883638.1 (probable F-box protein At4g22030 [Benincasa hispida])

HSP 1 Score: 320 bits (820), Expect = 6.37e-106
Identity = 167/188 (88.83%), Postives = 177/188 (94.15%), Query Frame = 0


Query: 1   WPNSSENYESQAKNKNTHFDGKQGRDSNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLV 60
           WPNSS +YESQ K++  HFDGKQ RDSNGWSDELEAEMREVVEIVK+ DAEDYVRLGNLV
Sbjct: 228 WPNSSNDYESQTKDEKAHFDGKQRRDSNGWSDELEAEMREVVEIVKTKDAEDYVRLGNLV 287

Query: 61  LKVNKTLAITGPVLTGIAALSSAFVGDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFE 120
           LKVNKTLAI+GPVLTG+AALSSAFVGDWSSAGM VAA AGSLAAAVNALEHGGQ+GMVFE
Sbjct: 288 LKVNKTLAISGPVLTGLAALSSAFVGDWSSAGMVVAAAAGSLAAAVNALEHGGQVGMVFE 347

Query: 121 MYRNSAGFFGLLEESIRGTLGEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAR 180
           MYRNSAGFFGLLEESI+GTL EK+WEKRENG VFERKVALKLGRSLSQLRQLATKSAAAR
Sbjct: 348 MYRNSAGFFGLLEESIKGTLEEKDWEKRENGHVFERKVALKLGRSLSQLRQLATKSAAAR 407

Query: 181 EEGFSMDE 188
           EEG S+DE
Sbjct: 408 EEGISIDE 415

[Close]

BLAST of Cucsat.G2422 vs. NCBI nr
Match: XP_008441102.1 (PREDICTED: probable F-box protein At4g22030 [Cucumis melo])

HSP 1 Score: 310 bits (794), Expect = 8.63e-104
Identity = 161/177 (90.96%), Postives = 169/177 (95.48%), Query Frame = 0


Query: 12  AKNKNTHFDGKQGRDSNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLVLKVNKTLAITG 71
            KN+NTHFDGKQGRDSNGWSDELEAEMREV+E+VKS DAEDYVRLGNLVLKVNKTLAI+G
Sbjct: 110 TKNENTHFDGKQGRDSNGWSDELEAEMREVIEVVKSKDAEDYVRLGNLVLKVNKTLAISG 169

Query: 72  PVLTGIAALSSAFVGDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGL 131
           PVLTGIAALSSAFVGDWSSAGM VAA AGSL AAVNALEHGGQIGMVFEMYRN+AGFFGL
Sbjct: 170 PVLTGIAALSSAFVGDWSSAGMVVAAAAGSLGAAVNALEHGGQIGMVFEMYRNTAGFFGL 229

Query: 132 LEESIRGTLGEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGFSMDE 188
           LEESIRGTL EK+WEKRENGEVFERKVALKLGRS+SQLRQLA+KSA AREEG SMDE
Sbjct: 230 LEESIRGTLEEKDWEKRENGEVFERKVALKLGRSISQLRQLASKSAVAREEGISMDE 286

[Close]

BLAST of Cucsat.G2422 vs. ExPASy TrEMBL
Match: A0A0A0KL68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513610 PE=4 SV=1)

HSP 1 Score: 345 bits (885), Expect = 4.22e-116
Identity = 183/188 (97.34%), Postives = 183/188 (97.34%), Query Frame = 0


Query: 1   WPNSSENYESQAKNKNTHFDGKQGRDSNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLV 60
           WPNSSENYESQ KN NTHFDGKQGRDSNGWS ELEAEMREVVEIVKS DAEDYVRLGNLV
Sbjct: 227 WPNSSENYESQTKNGNTHFDGKQGRDSNGWSVELEAEMREVVEIVKSKDAEDYVRLGNLV 286

Query: 61  LKVNKTLAITGPVLTGIAALSSAFVGDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFE 120
           LKVNKTLAITGPVLTGIAALSSAFVGDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFE
Sbjct: 287 LKVNKTLAITGPVLTGIAALSSAFVGDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFE 346

Query: 121 MYRNSAGFFGLLEESIRGTLGEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAR 180
           MYRNSAGFFGLLEESIRGTLGEKEWEKRENGEVFERKVALK GRSLSQLRQLATKSAAAR
Sbjct: 347 MYRNSAGFFGLLEESIRGTLGEKEWEKRENGEVFERKVALKFGRSLSQLRQLATKSAAAR 406

Query: 181 EEGFSMDE 188
           EEGFSMDE
Sbjct: 407 EEGFSMDE 414

[Close]

BLAST of Cucsat.G2422 vs. ExPASy TrEMBL
Match: A0A0A0KN03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513600 PE=4 SV=1)

HSP 1 Score: 338 bits (867), Expect = 2.26e-113
Identity = 177/188 (94.15%), Postives = 182/188 (96.81%), Query Frame = 0


Query: 1   WPNSSENYESQAKNKNTHFDGKQGRDSNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLV 60
           WPNSSENYESQAKNKNTHFDGKQGR+SNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLV
Sbjct: 227 WPNSSENYESQAKNKNTHFDGKQGRESNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLV 286

Query: 61  LKVNKTLAITGPVLTGIAALSSAFVGDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFE 120
           LKVNKTLAITGPVLTGIAALSSAFVGDWSS GM VAA AGSLAAAVN LEHGGQIGMVFE
Sbjct: 287 LKVNKTLAITGPVLTGIAALSSAFVGDWSSTGMVVAAAAGSLAAAVNTLEHGGQIGMVFE 346

Query: 121 MYRNSAGFFGLLEESIRGTLGEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAR 180
           MYRN+AGFFGLLEESIRGTL EK+WEKRENGEVFERKVALKLGRSLSQLRQLA+KSAAAR
Sbjct: 347 MYRNTAGFFGLLEESIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLASKSAAAR 406

Query: 181 EEGFSMDE 188
           EEG S+DE
Sbjct: 407 EEGISIDE 414

[Close]

BLAST of Cucsat.G2422 vs. ExPASy TrEMBL
Match: A0A5D3CM83 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006350 PE=4 SV=1)

HSP 1 Score: 326 bits (835), Expect = 1.60e-108
Identity = 172/188 (91.49%), Postives = 178/188 (94.68%), Query Frame = 0


Query: 1   WPNSSENYESQAKNKNTHFDGKQGRDSNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLV 60
           WPNSSENYESQ KN+NT+ D KQGR+SNGWSDELEAEMREV EIVKS DAEDYVRLGNLV
Sbjct: 227 WPNSSENYESQTKNENTYLDAKQGRESNGWSDELEAEMREVAEIVKSKDAEDYVRLGNLV 286

Query: 61  LKVNKTLAITGPVLTGIAALSSAFVGDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFE 120
           LKVNK LA +GPVL+GIAALSSAFVGDWSSAGMAVAA AGSLAAAVNALEHGGQIGMVFE
Sbjct: 287 LKVNKILATSGPVLSGIAALSSAFVGDWSSAGMAVAAAAGSLAAAVNALEHGGQIGMVFE 346

Query: 121 MYRNSAGFFGLLEESIRGTLGEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAR 180
           MYRN+AGFFGLLEESIRGTL EKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAR
Sbjct: 347 MYRNTAGFFGLLEESIRGTLEEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAR 406

Query: 181 EEGFSMDE 188
           EEG SMDE
Sbjct: 407 EEGISMDE 414

[Close]

BLAST of Cucsat.G2422 vs. ExPASy TrEMBL
Match: A0A1S3B3A5 (probable F-box protein At4g22030 OS=Cucumis melo OX=3656 GN=LOC103485328 PE=4 SV=1)

HSP 1 Score: 310 bits (794), Expect = 4.18e-104
Identity = 161/177 (90.96%), Postives = 169/177 (95.48%), Query Frame = 0


Query: 12  AKNKNTHFDGKQGRDSNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLVLKVNKTLAITG 71
            KN+NTHFDGKQGRDSNGWSDELEAEMREV+E+VKS DAEDYVRLGNLVLKVNKTLAI+G
Sbjct: 110 TKNENTHFDGKQGRDSNGWSDELEAEMREVIEVVKSKDAEDYVRLGNLVLKVNKTLAISG 169

Query: 72  PVLTGIAALSSAFVGDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGL 131
           PVLTGIAALSSAFVGDWSSAGM VAA AGSL AAVNALEHGGQIGMVFEMYRN+AGFFGL
Sbjct: 170 PVLTGIAALSSAFVGDWSSAGMVVAAAAGSLGAAVNALEHGGQIGMVFEMYRNTAGFFGL 229

Query: 132 LEESIRGTLGEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGFSMDE 188
           LEESIRGTL EK+WEKRENGEVFERKVALKLGRS+SQLRQLA+KSA AREEG SMDE
Sbjct: 230 LEESIRGTLEEKDWEKRENGEVFERKVALKLGRSISQLRQLASKSAVAREEGISMDE 286

[Close]

BLAST of Cucsat.G2422 vs. ExPASy TrEMBL
Match: A0A1S3B2M5 (probable F-box protein At4g22030 OS=Cucumis melo OX=3656 GN=LOC103485327 PE=4 SV=1)

HSP 1 Score: 303 bits (776), Expect = 2.28e-101
Identity = 161/177 (90.96%), Postives = 167/177 (94.35%), Query Frame = 0


Query: 12  AKNKNTHFDGKQGRDSNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLVLKVNKTLAITG 71
            KN+NT+ D KQGR+SNGWSDELEAEMREV EIVKS DAEDYVRLGNLVLKVNK LA +G
Sbjct: 110 TKNENTYLDAKQGRESNGWSDELEAEMREVAEIVKSKDAEDYVRLGNLVLKVNKILATSG 169

Query: 72  PVLTGIAALSSAFVGDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGL 131
           PVL+GIAALSSAFVGDWSSAGMAVAA AGSLAAAVNALEHGGQIGMVFEMYRN+AGFFGL
Sbjct: 170 PVLSGIAALSSAFVGDWSSAGMAVAAAAGSLAAAVNALEHGGQIGMVFEMYRNTAGFFGL 229

Query: 132 LEESIRGTLGEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGFSMDE 188
           LEESIRGTL EKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEG SMDE
Sbjct: 230 LEESIRGTLEEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISMDE 286

[Close]

BLAST of Cucsat.G2422 vs. TAIR 10
Match: AT4G22030.1 (F-box family protein with a domain of unknown function (DUF295) )

HSP 1 Score: 184.1 bits (466), Expect = 1.0e-46
Identity = 99/160 (61.88%), Postives = 124/160 (77.50%), Query Frame = 0


Query: 26  DSNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLVLKVNKTLAITGPVLTGIAALSSAFV 85
           ++NGW+ ELE EMREVVE++KS DAE+Y +LGN+ LK+N+ LAI+GPVLTGIAA+SS F+
Sbjct: 257 EANGWNSELEMEMREVVEVIKSRDAEEYEKLGNVALKLNRVLAISGPVLTGIAAVSSGFI 316

Query: 86  GDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIRGTLGEKEW 145
           G  S     VA    SLAA VN LEHGGQ+GMV EMYRNSAGFF L+E++I+        
Sbjct: 317 GHGSGLAGVVATTCASLAAVVNTLEHGGQVGMVVEMYRNSAGFFSLMEDTIK-------T 376

Query: 146 EKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGFS 186
           E+RENG+VFE KVALKLGRSLS+LR LA +S+ +R +G S
Sbjct: 377 ERRENGQVFETKVALKLGRSLSELRDLARRSSLSRFDGSS 409

[Close]

BLAST of Cucsat.G2422 vs. TAIR 10
Match: AT4G04480.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT4G22030.1); Has 78 Blast hits to 78 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 179.9 bits (455), Expect = 1.9e-45
Identity = 102/176 (57.95%), Postives = 126/176 (71.59%), Query Frame = 0


Query: 1   WPNSSENYESQAKNKNTHFDGKQGRDSNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLV 60
           WP      E++ KN  T         +NGWS ELEAEMREV  +VKS DAE+Y +LG++ 
Sbjct: 227 WP------ENKEKNPKTSL-------ANGWSQELEAEMREVAHVVKSRDAEEYEKLGHVA 286

Query: 61  LKVNKTLAITGPVLTGIAALSSAFVGDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFE 120
           LK+N+ LAI+GPVLTG++A+SS F+G  S     VA    SLAA VN LEHGGQ+GMVFE
Sbjct: 287 LKLNRFLAISGPVLTGVSAVSSVFIGQDSGLAGIVAMTCASLAAVVNTLEHGGQVGMVFE 346

Query: 121 MYRNSAGFFGLLEESIRGTLGEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKS 177
           MYRNSAGFF LLEE+++ T      EKRENG+VFE +VA+KLGRSLS+LR LA +S
Sbjct: 347 MYRNSAGFFSLLEETMKST------EKRENGQVFETRVAVKLGRSLSELRDLAKRS 383

The following BLAST results are available for this feature:

BLAST of Cucsat.G2422 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65451	1.4e-45	61.88	Probable F-box protein At4g22030 OS=Arabidopsis thaliana OX=3702 GN=At4g22030 PE...	[more]

BLAST of Cucsat.G2422 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134771.3	2.16e-116	97.87	probable F-box protein At4g22030 [Cucumis sativus] >KAE8647658.1 hypothetical pr...	[more]
XP_004134976.2	4.67e-113	94.15	probable F-box protein At4g22030 [Cucumis sativus]	[more]
TYK13033.1	3.30e-108	91.49	putative F-box protein [Cucumis melo var. makuwa]	[more]
XP_038883638.1	6.37e-106	88.83	probable F-box protein At4g22030 [Benincasa hispida]	[more]
XP_008441102.1	8.63e-104	90.96	PREDICTED: probable F-box protein At4g22030 [Cucumis melo]	[more]

BLAST of Cucsat.G2422 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL68	4.22e-116	97.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513610 PE=4 SV=1	[more]
A0A0A0KN03	2.26e-113	94.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513600 PE=4 SV=1	[more]
A0A5D3CM83	1.60e-108	91.49	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3B3A5	4.18e-104	90.96	probable F-box protein At4g22030 OS=Cucumis melo OX=3656 GN=LOC103485328 PE=4 SV...	[more]
A0A1S3B2M5	2.28e-101	90.96	probable F-box protein At4g22030 OS=Cucumis melo OX=3656 GN=LOC103485327 PE=4 SV...	[more]

BLAST of Cucsat.G2422 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G22030.1	1.0e-46	61.88	F-box family protein with a domain of unknown function (DUF295)	[more]
AT4G04480.1	1.9e-45	57.95	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: flower, pollen tube; EXP...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027949	Petal formation-expressed	PFAM	PF14476	Chloroplast_duf	coord: 1..170 e-value: 1.6E-67 score: 227.8
IPR027949	Petal formation-expressed	PANTHER	PTHR33358	F-BOX PROTEIN WITH A DOMAIN PROTEIN	coord: 15..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR33358:SF5	PLANT-LIKE PROTEIN, PUTATIVE-RELATED	coord: 15..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G2422.T1	Cucsat.G2422.T1	mRNA