Cucsat.G2357 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G2357
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Protein WUSCHEL
Location	ctg1002: 3984965 .. 3986976 (+)
RNA-Seq Expression	Cucsat.G2357
Synteny	Cucsat.G2357

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCTTTTTATGATCATTTTGAGTCCTTCTCTCACAGATTTTCCCTCTGATTTCACTCCATGTGCCACTCTCACTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCTTTATTTCTCTATATTAATTAATTTCATGCACACACACCCTCACACTCACTCATCTCATTAATTAATAATTTTCTCAATACCCCTTAACTTGTCCATATTCTCACCAATGGAACATCCTGCCAAACAACAACAACAAGAACAAGGAATTAATGATCAAGGTGGTGAAGGTGGTGGTGGAAGCAATGGAAAAGGTGGGTTTTTGTGTAGGCAAAGTAGCAGTCGATGGACTCCAACAACTGACCAAATACGAATATTGAAAGAGCTTTATTATAACAATGGTGTTCGCTCCCCAAGCGCTGATCAAATTCAGAGGATCTCTGCTAGGCTTAGACAGTACGGTAAAATCGAAGGCAAAAACGTTTTTTATTGGTTTCAAAACCATAAGGCTCGTGAAAGACAGAAGAAAAGATTCACTTCAAATTCTACTTCTCCTATTACTACCTCCAATACTACTACAACTACTACTGATTTTAAAATTTCTTCAACTAATAATAATATTAACTGGAAGTCTGAAGATCATTCCTCCTCTTCTCATAACAAATTTCCTCCAGGTTCGTTGTTTCTTATAACAATCTGTTTCTGTTTTTTTTTTTTTTAAGGAAAGGAATAACAATTGCTTTAATTGATTCTTGTTTTTGCAGCTCCTTCTTCTTCGGTTATGGTCGCCGTTGGCCATATGGGAAATTACGGATATGGGTCTGCCACTTTTGAGAACAGTTTTAGAGTATGTTCTAATTTTTACCATACTAAATTTTCATTATTTAATTTCATCAGGGTGTTTTTTCCCTTTCACGTGTTCTGAAGTCAAGAAATGGAAATTTTTTTATCTTTTTTTGTTTTGTTTTTTTGTTTGAGAGAAGCAGGAACAATCACTTCAGAAAATTTTGGAAAATAAGATCATAGAGTGAAACATTTGAGTTTTTTTCTTCTATTATTTATAGCGATTTCTGTTTGGAATTTCTGTTTGTTTCTCGTCGTTTTTTAAATTATGAATTTTACTTTATTGAAGAAACATTTGAATTTGAGCTGCTAGTTGAATTTTGGAAACAAGAAATTACTTTTTAGTTTCCATACTTGGTTCATTCAAAGTCTAGTAAAAAGTGAACAAACTTTTAATTTTCGTAAAGATCAAAGGTTTTGTCTTTACAAGAAAAAAAAAAACATTTTCTTTTTCTAAAAATCGAACAGTTATCGAACAAATTTAGTATTTGGAATGATTTTGGATACAAAATATAATAAATAAGTGGGTAATTTTAGAAGTGGTTTTGCAAGGTGTGGGATCTTTTGTCGATTAATCCAAATTTGATCTGATTCTGCTACGCCACTTCTTCCCGTTTCTCAGGAGTGTTCAATATCGTCGGGAGGAAATAGCAGTGTCGTCGGGTACCGGAGCCACAACATGGGATCATGGATCGGTATCGATCCGTATTCTTCTCCGGCAGCTGCCGCGGCGGGGGGATCAGCCAATGTGTTTGAAAAAACAAAATATGTTGAAGAATCCATGGAAGATCACGAGGAGCAAGAGATCGAAACTCTCCCCCTTTTCCCCATCCATGGTGACCGGAATAATCTCGGTGGTTTCTGCAGCATGAAGCCGGAATATTCAGAGAGCTACTACACCACCACTTGGTACGGGCGGTCTGACGATAATGGAGCCGCCGGTTCTCGGGCTTCGCTGGAACTCAGCCTCAACTCTTACGCCACCATCTCACCTGATGATGGAATGTGATTTCATGAAAACCCCCAGAAAGTAATTTTAAATTAATTGTTTATGAAGTTTAATTATCCAATTATGGGTTTGTTTGAAAAAAACTTAGCGATTTCTAATTAATTAGGTGCTGAAAACTGATATTAAGAATTAATATCTTTGTTTCCTCGAACTTAGTGTTTGTATTTACTAAAATTCCCAACTAATT

Coding sequence (CDS)

ATGGAACATCCTGCCAAACAACAACAACAAGAACAAGGAATTAATGATCAAGGTGGTGAAGGTGGTGGTGGAAGCAATGGAAAAGGTGGGTTTTTGTGTAGGCAAAGTAGCAGTCGATGGACTCCAACAACTGACCAAATACGAATATTGAAAGAGCTTTATTATAACAATGGTGTTCGCTCCCCAAGCGCTGATCAAATTCAGAGGATCTCTGCTAGGCTTAGACAGTACGGTAAAATCGAAGGCAAAAACGTTTTTTATTGGTTTCAAAACCATAAGGCTCGTGAAAGACAGAAGAAAAGATTCACTTCAAATTCTACTTCTCCTATTACTACCTCCAATACTACTACAACTACTACTGATTTTAAAATTTCTTCAACTAATAATAATATTAACTGGAAGTCTGAAGATCATTCCTCCTCTTCTCATAACAAATTTCCTCCAGCTCCTTCTTCTTCGGTTATGGTCGCCGTTGGCCATATGGGAAATTACGGATATGGGTCTGCCACTTTTGAGAACAGTTTTAGAGAGTGTTCAATATCGTCGGGAGGAAATAGCAGTGTCGTCGGGTACCGGAGCCACAACATGGGATCATGGATCGGTATCGATCCGTATTCTTCTCCGGCAGCTGCCGCGGCGGGGGGATCAGCCAATGTGTTTGAAAAAACAAAATATGTTGAAGAATCCATGGAAGATCACGAGGAGCAAGAGATCGAAACTCTCCCCCTTTTCCCCATCCATGGTGACCGGAATAATCTCGGTGGTTTCTGCAGCATGAAGCCGGAATATTCAGAGAGCTACTACACCACCACTTGGTACGGGCGGTCTGACGATAATGGAGCCGCCGGTTCTCGGGCTTCGCTGGAACTCAGCCTCAACTCTTACGCCACCATCTCACCTGATGATGGAATGTGA

Protein sequence

MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNSTSPITTSNTTTTTTDFKISSTNNNINWKSEDHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSSVVGYRSHNMGSWIGIDPYSSPAAAAAGGSANVFEKTKYVEESMEDHEEQEIETLPLFPIHGDRNNLGGFCSMKPEYSESYYTTTWYGRSDDNGAAGSRASLELSLNSYATISPDDGM

Homology

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BLAST of Cucsat.G2357 vs. ExPASy Swiss-Prot
Match: Q6YBV1 (Protein WUSCHEL OS=Antirrhinum majus OX=4151 GN=WUS PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-40
Identity = 104/180 (57.78%), Postives = 124/180 (68.89%), Query Frame = 0


Query: 6   KQQQQEQGINDQGGEG-GGGSNGKGG--FLCRQSSSRWTPTTDQIRILKELYYNNGVRSP 65
           +QQQQ+QG   Q  +G G  +NG GG  FLCRQSS+RWTPTTDQIRILK+LYYNNGVRSP
Sbjct: 4   QQQQQQQGNEQQDSQGIGKINNGSGGSSFLCRQSSTRWTPTTDQIRILKDLYYNNGVRSP 63

Query: 66  SADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNSTSPITTSNTTTTTTDF 125
           +A+QIQRISA+LRQYGKIEGKNVFYWFQNHKARERQKKRFT++    +     T     +
Sbjct: 64  TAEQIQRISAKLRQYGKIEGKNVFYWFQNHKARERQKKRFTADHHHHMNV--PTIHNHHY 123

Query: 126 K---ISSTNNNINWKSEDHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRVCS 180
           K   + +  +N+N  S   SS+    F   P S       H+GNYGYGS   E SFR C+
Sbjct: 124 KPPPVYNKFSNMNSGSFPSSSNGSPGFLTTPGS-------HVGNYGYGSVAMEKSFRECT 174

[Close]

BLAST of Cucsat.G2357 vs. ExPASy Swiss-Prot
Match: Q84VT7 (Protein WUSCHEL OS=Solanum lycopersicum OX=4081 GN=WUS PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.0e-40
Identity = 95/171 (55.56%), Postives = 113/171 (66.08%), Query Frame = 0


Query: 23  GGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEG 82
           GG N    FLCRQSSSRWTPT+DQIRILK+LYYNNGVRSP+A+QIQRISA+LRQYGKIEG
Sbjct: 10  GGKNSNNSFLCRQSSSRWTPTSDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEG 69

Query: 83  KNVFYWFQNHKARERQKKRFTSNSTSPITTSNTTTTTTDFKISSTNNNIN--------WK 142
           KNVFYWFQNHKARERQKKR  + ++                 ++ NNNI+        W+
Sbjct: 70  KNVFYWFQNHKARERQKKRLIAAAS-----------------ATDNNNISSMQMIPHLWR 129

Query: 143 SED--HSSSSHNKFP----PAPSSSVMVAVGHMGNYGYGSATFENSFRVCS 180
           S D  H  ++    P    P+PSS  ++ V   GNYGYG+   E SFR CS
Sbjct: 130 SPDDHHKYNTATTNPGVQCPSPSSHGVLPVVQTGNYGYGTLAMEKSFRECS 163

[Close]

BLAST of Cucsat.G2357 vs. ExPASy Swiss-Prot
Match: Q8LL11 (Protein WUSCHEL OS=Petunia hybrida OX=4102 GN=WUS PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.2e-39
Identity = 90/165 (54.55%), Postives = 109/165 (66.06%), Query Frame = 0


Query: 20  EGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGK 79
           E G   N    F+CRQ+S+RWTPTTDQIRILK+LYYNNGVRSP+A+QIQRISA+LRQYGK
Sbjct: 28  EDGSNKNNSSNFMCRQNSTRWTPTTDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGK 87

Query: 80  IEGKNVFYWFQNHKARERQKKRFTSNSTSPITTSNTTTTTTDFKISSTNNNINWKSE--- 139
           IEGKNVFYWFQNHKARERQKKR  + +         TT  T+  +        W+S    
Sbjct: 88  IEGKNVFYWFQNHKARERQKKRLIAAA---------TTDNTNLPMQMQFQRGVWRSSADD 147

Query: 140 --DHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRVCS 180
              H  ++     P+ SS  ++AVG  GN+GYG+   E SFR CS
Sbjct: 148 PIHHKYTNPGVHCPSASSHGVLAVGQNGNHGYGALAMEKSFRDCS 183

[Close]

BLAST of Cucsat.G2357 vs. ExPASy Swiss-Prot
Match: Q9SB92 (Protein WUSCHEL OS=Arabidopsis thaliana OX=3702 GN=WUS PE=1 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 2.0e-32
Identity = 90/197 (45.69%), Postives = 119/197 (60.41%), Query Frame = 0


Query: 1   MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR 60
           ME P  Q    Q  + + G      +G GG+ CRQ+S+RWTPTT+QI+ILKELYYNN +R
Sbjct: 1   MEPPQHQHHHHQA-DQESGNNNNNKSGSGGYTCRQTSTRWTPTTEQIKILKELYYNNAIR 60

Query: 61  SPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFT-SNSTSPITTSNTTTTT 120
           SP+ADQIQ+I+ARLRQ+GKIEGKNVFYWFQNHKARERQKKRF  +N T+P ++ N+    
Sbjct: 61  SPTADQIQKITARLRQFGKIEGKNVFYWFQNHKARERQKKRFNGTNMTTPSSSPNSVMMA 120

Query: 121 TD------------FKISSTNNNINWK-SEDHSSSSHNKFPPAPSSS------------- 169
            +              +    N++N K ++DH    HNK  P PS +             
Sbjct: 121 ANDHYHPLLHHHHGVPMQRPANSVNVKLNQDHHLYHHNK--PYPSFNNGNLNHASSGTEC 180

[Close]

BLAST of Cucsat.G2357 vs. ExPASy Swiss-Prot
Match: Q7XM13 (WUSCHEL-related homeobox 1 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX1 PE=1 SV=3)

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-29
Identity = 73/122 (59.84%), Postives = 92/122 (75.41%), Query Frame = 0


Query: 1   MEHPAKQQQQEQGINDQGGEGGGGSN--GKGGF-LCRQSSSRWTPTTDQIRILKELYYNN 60
           M+H  +QQ+Q+ G       GGGG    G+GG  +CR S +RWTPTT+QI+IL+ELYY+ 
Sbjct: 1   MDHMQQQQRQQVG-------GGGGEEVAGRGGVPVCRPSGTRWTPTTEQIKILRELYYSC 60

Query: 61  GVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNSTSPITTSNTTT 120
           G+RSP+++QIQRI+A LRQYG+IEGKNVFYWFQNHKARERQKKR        +TT + TT
Sbjct: 61  GIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQKKR--------LTTLDVTT 107

[Close]

BLAST of Cucsat.G2357 vs. NCBI nr
Match: XP_004134866.1 (protein WUSCHEL [Cucumis sativus])

HSP 1 Score: 353 bits (905), Expect = 2.88e-120
Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 1   MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR 60
           MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR
Sbjct: 1   MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR 60

Query: 61  SPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNSTSPITTSNTTTTTT 120
           SPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNSTSPITTSNTTTTTT
Sbjct: 61  SPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNSTSPITTSNTTTTTT 120

Query: 121 DFKISSTNNNINWKSEDHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRVCS 179
           DFKISSTNNNINWKSEDHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFR CS
Sbjct: 121 DFKISSTNNNINWKSEDHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRECS 179

[Close]

BLAST of Cucsat.G2357 vs. NCBI nr
Match: KAA0025680.1 (protein WUSCHEL [Cucumis melo var. makuwa] >TYK12555.1 protein WUSCHEL [Cucumis melo var. makuwa])

HSP 1 Score: 328 bits (841), Expect = 1.50e-110
Identity = 171/182 (93.96%), Postives = 172/182 (94.51%), Query Frame = 0


Query: 1   MEHPAKQQQQ---EQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNN 60
           MEHPAKQQQQ   EQGI+DQGGEGGGGSNGK GFLCRQSSSRWTPTTDQIRILKELYYNN
Sbjct: 1   MEHPAKQQQQQQQEQGIHDQGGEGGGGSNGKSGFLCRQSSSRWTPTTDQIRILKELYYNN 60

Query: 61  GVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNSTSPITTSNTTT 120
           GVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNS SPITT  TTT
Sbjct: 61  GVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNSNSPITT--TTT 120

Query: 121 TTTDFKISSTNNNINWKSEDHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRV 179
           TT  FKISSTNNNINWKSEDHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFR 
Sbjct: 121 TTDHFKISSTNNNINWKSEDHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRE 180

[Close]

BLAST of Cucsat.G2357 vs. NCBI nr
Match: XP_038883674.1 (protein WUSCHEL isoform X2 [Benincasa hispida])

HSP 1 Score: 234 bits (597), Expect = 1.59e-73
Identity = 134/189 (70.90%), Postives = 147/189 (77.78%), Query Frame = 0


Query: 1   MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR 60
           M+ P  QQQQ+  +NDQ  +G   +NGKGGFLCRQSS+RWTPTTDQIRILKELYYNNGVR
Sbjct: 1   MDLPKHQQQQQ--VNDQ--DGSNNNNGKGGFLCRQSSTRWTPTTDQIRILKELYYNNGVR 60

Query: 61  SPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNSTSPITTSNTT---- 120
           SPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFT+ +++  ++S T     
Sbjct: 61  SPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTTTASASASSSPTHHHQQ 120

Query: 121 ---TTTTDFKISSTNNNINWKSEDHSSSS---HNKFPPAPSSSVMVAVGHMGNYGYGSAT 179
                     ISSTNN  NWK  D SSSS   HNK   APSSSVMVAVGHMGNYGYGS T
Sbjct: 121 HQFPLPKHQHISSTNNINNWKPHDSSSSSPLFHNK---APSSSVMVAVGHMGNYGYGSPT 180

[Close]

BLAST of Cucsat.G2357 vs. NCBI nr
Match: XP_038883673.1 (protein WUSCHEL isoform X1 [Benincasa hispida])

HSP 1 Score: 234 bits (597), Expect = 1.64e-73
Identity = 134/189 (70.90%), Postives = 147/189 (77.78%), Query Frame = 0


Query: 1   MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR 60
           M+ P  QQQQ+  +NDQ  +G   +NGKGGFLCRQSS+RWTPTTDQIRILKELYYNNGVR
Sbjct: 1   MDLPKHQQQQQ--VNDQ--DGSNNNNGKGGFLCRQSSTRWTPTTDQIRILKELYYNNGVR 60

Query: 61  SPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNSTSPITTSNTT---- 120
           SPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFT+ +++  ++S T     
Sbjct: 61  SPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTTTASASASSSPTHHHQQ 120

Query: 121 ---TTTTDFKISSTNNNINWKSEDHSSSS---HNKFPPAPSSSVMVAVGHMGNYGYGSAT 179
                     ISSTNN  NWK  D SSSS   HNK   APSSSVMVAVGHMGNYGYGS T
Sbjct: 121 HQFPLPKHQHISSTNNINNWKPHDSSSSSPLFHNK--AAPSSSVMVAVGHMGNYGYGSPT 180

[Close]

BLAST of Cucsat.G2357 vs. NCBI nr
Match: XP_022926877.1 (protein WUSCHEL-like [Cucurbita moschata] >KAG6594778.1 Protein WUSCHEL, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 221 bits (562), Expect = 2.38e-68
Identity = 121/169 (71.60%), Postives = 128/169 (75.74%), Query Frame = 0


Query: 24  GSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGK 83
           GSNGKGGF+CRQSS+RWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGK
Sbjct: 14  GSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGK 73

Query: 84  NVFYWFQNHKARERQKKRFTSNSTS-----------PITTSNTTTTTTDFKISSTNNNIN 143
           NVFYWFQNHKARERQKKRFTS+++            P+             ISS      
Sbjct: 74  NVFYWFQNHKARERQKKRFTSSASDHLHHHHQQQQIPVPKQQQQQQLQSSLISS------ 133

Query: 144 WKSEDHSSSS--HNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRVCS 179
            K ED SSS   H K+PP PSSSVMVAVGHMGNYGYGS TFENSFR CS
Sbjct: 134 -KPEDSSSSPLFHTKYPPTPSSSVMVAVGHMGNYGYGSTTFENSFRECS 175

[Close]

BLAST of Cucsat.G2357 vs. ExPASy TrEMBL
Match: A0A0A0KH83 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G505860 PE=3 SV=1)

HSP 1 Score: 353 bits (905), Expect = 1.39e-120
Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 1   MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR 60
           MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR
Sbjct: 1   MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR 60

Query: 61  SPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNSTSPITTSNTTTTTT 120
           SPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNSTSPITTSNTTTTTT
Sbjct: 61  SPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNSTSPITTSNTTTTTT 120

Query: 121 DFKISSTNNNINWKSEDHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRVCS 179
           DFKISSTNNNINWKSEDHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFR CS
Sbjct: 121 DFKISSTNNNINWKSEDHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRECS 179

[Close]

BLAST of Cucsat.G2357 vs. ExPASy TrEMBL
Match: A0A5A7SHQ2 (Protein WUSCHEL OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001370 PE=3 SV=1)

HSP 1 Score: 328 bits (841), Expect = 7.28e-111
Identity = 171/182 (93.96%), Postives = 172/182 (94.51%), Query Frame = 0


Query: 1   MEHPAKQQQQ---EQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNN 60
           MEHPAKQQQQ   EQGI+DQGGEGGGGSNGK GFLCRQSSSRWTPTTDQIRILKELYYNN
Sbjct: 1   MEHPAKQQQQQQQEQGIHDQGGEGGGGSNGKSGFLCRQSSSRWTPTTDQIRILKELYYNN 60

Query: 61  GVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNSTSPITTSNTTT 120
           GVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNS SPITT  TTT
Sbjct: 61  GVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNSNSPITT--TTT 120

Query: 121 TTTDFKISSTNNNINWKSEDHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRV 179
           TT  FKISSTNNNINWKSEDHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFR 
Sbjct: 121 TTDHFKISSTNNNINWKSEDHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRE 180

[Close]

BLAST of Cucsat.G2357 vs. ExPASy TrEMBL
Match: A0A6J1EFK3 (protein WUSCHEL-like OS=Cucurbita moschata OX=3662 GN=LOC111433860 PE=3 SV=1)

HSP 1 Score: 221 bits (562), Expect = 1.15e-68
Identity = 121/169 (71.60%), Postives = 128/169 (75.74%), Query Frame = 0


Query: 24  GSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGK 83
           GSNGKGGF+CRQSS+RWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGK
Sbjct: 14  GSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGK 73

Query: 84  NVFYWFQNHKARERQKKRFTSNSTS-----------PITTSNTTTTTTDFKISSTNNNIN 143
           NVFYWFQNHKARERQKKRFTS+++            P+             ISS      
Sbjct: 74  NVFYWFQNHKARERQKKRFTSSASDHLHHHHQQQQIPVPKQQQQQQLQSSLISS------ 133

Query: 144 WKSEDHSSSS--HNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRVCS 179
            K ED SSS   H K+PP PSSSVMVAVGHMGNYGYGS TFENSFR CS
Sbjct: 134 -KPEDSSSSPLFHTKYPPTPSSSVMVAVGHMGNYGYGSTTFENSFRECS 175

[Close]

BLAST of Cucsat.G2357 vs. ExPASy TrEMBL
Match: A0A6J1KQL8 (protein WUSCHEL OS=Cucurbita maxima OX=3661 GN=LOC111497366 PE=3 SV=1)

HSP 1 Score: 219 bits (559), Expect = 2.99e-68
Identity = 120/166 (72.29%), Postives = 127/166 (76.51%), Query Frame = 0


Query: 24  GSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGK 83
           GSNGKGGF+CRQSS+RWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGK
Sbjct: 14  GSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGK 73

Query: 84  NVFYWFQNHKARERQKKRFTSNSTS--------PITTSNTTTTTTDFKISSTNNNINWKS 143
           NVFYWFQNHKARERQKKRFTS+++         P+             +SS       K 
Sbjct: 74  NVFYWFQNHKARERQKKRFTSSASDHHHHHQQIPVPKQQQQQQLQSSLVSS-------KP 133

Query: 144 EDHSSSS--HNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRVCS 179
           ED SSS   H K PP PSSSVMVAVGHMGNYGYGS TFENSFR CS
Sbjct: 134 EDSSSSPLFHTKCPPTPSSSVMVAVGHMGNYGYGSTTFENSFRECS 172

[Close]

BLAST of Cucsat.G2357 vs. ExPASy TrEMBL
Match: A0A6J1GEJ9 (protein WUSCHEL-like OS=Cucurbita moschata OX=3662 GN=LOC111453464 PE=3 SV=1)

HSP 1 Score: 217 bits (553), Expect = 2.20e-67
Identity = 118/170 (69.41%), Postives = 128/170 (75.29%), Query Frame = 0


Query: 17  QGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 76
           QG E G    G+GGFLCRQSS+RWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ
Sbjct: 5   QGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 64

Query: 77  YGKIEGKNVFYWFQNHKARERQKKRFTSNSTSPITTSNTTTTTTDFKISSTNNNINWKSE 136
           YGKIEGKNVFYWFQNHKARERQKKRFTS S    +           +  S   +  WK +
Sbjct: 65  YGKIEGKNVFYWFQNHKARERQKKRFTSGSDHHFSKQQQ-------QHPSLIPSTLWKPQ 124

Query: 137 DHSSSSHNKFPP-------APSSSVMVAVGHMGNYGYGSATFENSFRVCS 179
           D SSS HN++ P       APSS VMVAVGHMGNYGYGS+TF+NSFR CS
Sbjct: 125 DSSSSFHNRYRPSNEYVSIAPSSPVMVAVGHMGNYGYGSSTFDNSFRECS 167

[Close]

BLAST of Cucsat.G2357 vs. TAIR 10
Match: AT2G17950.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-33
Identity = 90/197 (45.69%), Postives = 119/197 (60.41%), Query Frame = 0


Query: 1   MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR 60
           ME P  Q    Q  + + G      +G GG+ CRQ+S+RWTPTT+QI+ILKELYYNN +R
Sbjct: 1   MEPPQHQHHHHQA-DQESGNNNNNKSGSGGYTCRQTSTRWTPTTEQIKILKELYYNNAIR 60

Query: 61  SPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFT-SNSTSPITTSNTTTTT 120
           SP+ADQIQ+I+ARLRQ+GKIEGKNVFYWFQNHKARERQKKRF  +N T+P ++ N+    
Sbjct: 61  SPTADQIQKITARLRQFGKIEGKNVFYWFQNHKARERQKKRFNGTNMTTPSSSPNSVMMA 120

Query: 121 TD------------FKISSTNNNINWK-SEDHSSSSHNKFPPAPSSS------------- 169
            +              +    N++N K ++DH    HNK  P PS +             
Sbjct: 121 ANDHYHPLLHHHHGVPMQRPANSVNVKLNQDHHLYHHNK--PYPSFNNGNLNHASSGTEC 180

[Close]

BLAST of Cucsat.G2357 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 107.1 bits (266), Expect = 1.7e-23
Identity = 49/65 (75.38%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 37  SSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARE 96
           SSRW PT DQ+R+L+EL Y  G R+PSAD IQ+I+A+LR+YGKIEGKNVFYWFQNHKARE
Sbjct: 74  SSRWNPTPDQLRVLEEL-YRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARE 133

Query: 97  RQKKR 102
           RQK+R
Sbjct: 134 RQKRR 137

[Close]

BLAST of Cucsat.G2357 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 )

HSP 1 Score: 101.7 bits (252), Expect = 7.2e-22
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 36  SSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKAR 95
           SSSRW PT DQI +L+ L Y  G+R+PSADQIQ+I+ RLR YG IEGKNVFYWFQNHKAR
Sbjct: 11  SSSRWNPTKDQITLLENL-YKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKAR 70

Query: 96  ERQKKR 102
           +RQK++
Sbjct: 71  QRQKQK 75

[Close]

BLAST of Cucsat.G2357 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 92.8 bits (229), Expect = 3.3e-19
Identity = 41/63 (65.08%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 39  RWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQ 98
           RW PT +QI  L+EL Y +G R+P+ +QIQ+I+++LR+YG+IEGKNVFYWFQNHKARER 
Sbjct: 61  RWNPTPEQITTLEEL-YRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARERL 120

Query: 99  KKR 102
           K+R
Sbjct: 121 KRR 122

[Close]

BLAST of Cucsat.G2357 vs. TAIR 10
Match: AT3G11260.1 (WUSCHEL related homeobox 5 )

HSP 1 Score: 92.8 bits (229), Expect = 3.3e-19
Identity = 46/79 (58.23%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 23  GGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEG 82
           G +NG  G  C     RW PT +Q++IL +L +  G+R+P+ DQIQ+IS  L  YGKIE 
Sbjct: 12  GNNNGGTGTKC----GRWNPTVEQLKILTDL-FRAGLRTPTTDQIQKISTELSFYGKIES 71

Query: 83  KNVFYWFQNHKARERQKKR 102
           KNVFYWFQNHKARERQK+R
Sbjct: 72  KNVFYWFQNHKARERQKRR 85

The following BLAST results are available for this feature:

BLAST of Cucsat.G2357 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6YBV1	1.1e-40	57.78	Protein WUSCHEL OS=Antirrhinum majus OX=4151 GN=WUS PE=2 SV=1	[more]
Q84VT7	2.0e-40	55.56	Protein WUSCHEL OS=Solanum lycopersicum OX=4081 GN=WUS PE=2 SV=1	[more]
Q8LL11	8.2e-39	54.55	Protein WUSCHEL OS=Petunia hybrida OX=4102 GN=WUS PE=2 SV=1	[more]
Q9SB92	2.0e-32	45.69	Protein WUSCHEL OS=Arabidopsis thaliana OX=3702 GN=WUS PE=1 SV=2	[more]
Q7XM13	1.2e-29	59.84	WUSCHEL-related homeobox 1 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX1 PE=1...	[more]

BLAST of Cucsat.G2357 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134866.1	2.88e-120	99.44	protein WUSCHEL [Cucumis sativus]	[more]
KAA0025680.1	1.50e-110	93.96	protein WUSCHEL [Cucumis melo var. makuwa] >TYK12555.1 protein WUSCHEL [Cucumis ...	[more]
XP_038883674.1	1.59e-73	70.90	protein WUSCHEL isoform X2 [Benincasa hispida]	[more]
XP_038883673.1	1.64e-73	70.90	protein WUSCHEL isoform X1 [Benincasa hispida]	[more]
XP_022926877.1	2.38e-68	71.60	protein WUSCHEL-like [Cucurbita moschata] >KAG6594778.1 Protein WUSCHEL, partial...	[more]

BLAST of Cucsat.G2357 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KH83	1.39e-120	99.44	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G505860 PE...	[more]
A0A5A7SHQ2	7.28e-111	93.96	Protein WUSCHEL OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0013...	[more]
A0A6J1EFK3	1.15e-68	71.60	protein WUSCHEL-like OS=Cucurbita moschata OX=3662 GN=LOC111433860 PE=3 SV=1	[more]
A0A6J1KQL8	2.99e-68	72.29	protein WUSCHEL OS=Cucurbita maxima OX=3661 GN=LOC111497366 PE=3 SV=1	[more]
A0A6J1GEJ9	2.20e-67	69.41	protein WUSCHEL-like OS=Cucurbita moschata OX=3662 GN=LOC111453464 PE=3 SV=1	[more]

BLAST of Cucsat.G2357 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17950.1	1.4e-33	45.69	Homeodomain-like superfamily protein	[more]
AT3G18010.1	1.7e-23	75.38	WUSCHEL related homeobox 1	[more]
AT5G59340.1	7.2e-22	71.21	WUSCHEL related homeobox 2	[more]
AT2G01500.1	3.3e-19	65.08	Homeodomain-like superfamily protein	[more]
AT3G11260.1	3.3e-19	58.23	WUSCHEL related homeobox 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 35..103 e-value: 1.2E-5 score: 34.8
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 38..98 e-value: 1.3E-17 score: 63.3
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 33..99 score: 10.430197
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 39..100 e-value: 4.44188E-7 score: 44.1565
None	No IPR available	GENE3D	1.10.10.60		coord: 37..103 e-value: 1.4E-8 score: 36.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	PANTHER	PTHR45940:SF2	PROTEIN WUSCHEL	coord: 6..297
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 6..297
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 31..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G2357.T1	Cucsat.G2357.T1	mRNA
Cucsat.G2357.T2	Cucsat.G2357.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity