Cucsat.G2293 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G2293
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	40S ribosomal protein S6
Location	ctg1002: 3050087 .. 3052209 (+)
RNA-Seq Expression	Cucsat.G2293
Synteny	Cucsat.G2293

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAATTTAGACCCTAAATTAGAATAATGTCCTTTTGGGTCACACCGTTCACCAATGTGGTTCGGGCTCGTTTCGAATCCAGACCTCAGGGAGTCTCGTCAATGGCTCAAGCCCACACACTCATCGAATATCGTAAACCAATTCACAAAAGGCCGCACTGTTTTGTGGAAAAAAGAACAACGTTCTCAATTCTTTCTCATCACGCATCGGCTAAAATGTAATATACCCTCAAAGTCAAAGCACAATATCCCTAATTCGTTGCCAAGATGAAGGTTTGTATGAATCTCCATTCTTCTCGTACTGAGCTATTGCACTGTCCAATTTTTTTTTATGTAGAATTTGACACGTTTTCTACTCCTTCCCTTTCAGTTCAACATTGCTACTCCCACTACTGGGTGCCAGAAAAAGCTCCAAATCGATGACGATGCTAAACTGTAAGGAATTTTCTTTGTATATCGTACTGTTACCATCTCATTCTTCTTTCATTCTGTTGGTGGAAGTATCGGTTTTAGGGGTCCAACAATATGAAACTTGGGATGCTTATAGCACAAAGTTTTTTCTTACTGATTTTAACAATGTGTTTTTTGCTCGAAGGATTAGGAAGCAATGAACATGCTGCTTATTTTTATTTATTTAATTTCTTTATATTGTTCAGTAATTGTTTCATTAGTATGTATGATATTTCGTTTGGGGAACTTATAATTATCTGTGGAGTTGGCCTGCAAACTGGAAGCCTTTTCTTTTGCATTTCGTTACGACGTTAGTCTTTTTGTTCACACATTATCACAGATCCCCATTCTCGCTTAAATTTCCGTCTTTAGAAATGGAAGTTTCTTCTATTATTCCAAAATCATGGATATTATAGGAGATTTGATTACTTTTCTCACAAAACAAATTATCTGAAATCTAAACATAGCTGGATTCTGGTATCTGGTTTCGTGGGATTATTTGACTCTCTTAGTATCAAGTTTTTCATGTAGTGTTAGCTGTGACGAATTTGACTTGACTTGTCATATTGGGACAAGTGGGTCTCTCATTTGGAATATCCTTACAGTTCATTAGAATTTGTAGTCACACTTTAATATTCTTAATGCAGCCGACCATTTTGGGACAAGAGGATCTCCCAAGAAGTTAATGGAGATGCGCTTGGTGAAGTAAGTTTTCTGTTGGTATCTTTTTCATTACATTATAATCAAGTATTTTTCATTTCATCTGTCATGTTATTAACTTAGATGATTTTTGGCAGGAGTTTAAAAAGGTTATATTTTAAAAATAATGGGGGGTTTGTGACAAGCAAGTTTTTCCAATGAAACAAGGTGTCTTGACCACTGGCCATGTTCGCCTTTTGCTGCACAGAGGTATAATTTTTTTTTTTAATCTTACTGGTTCTGGCTGTAGTTTCAATAGAGCGGAGTGACTTACTTCTATATATGGAAAGCGAAGTATAAGTTTCGAGTCCTTGAACAGGTACTCCTTGTTTTCGTGGTTATGGTAGGAGGAAAGGTAAGAGAAGGAGGAAATCTGTCCGAGGTTGCATTGTTAATCCAGACCTCTCTGTTTTGAATTTGGTGACTGTGAAGAAGGGCGAGAATGACCTACCTGGCCTAACAGGTATTGAGAAGCCAAGAATGCGAGGTCCGAAAAGGGCATCTAAAATCCGGAAACTCTTCAATCTCTCCAAGGATGATGATGTTCGAAAGTATGTCAACACATACCGCAGAACCTTCACAAATAAACTTGGCGGGTTTGCTTACCAGTGTTCTGATACATAGTTGGTAACAGGGAATCAAGTAGAAACAATGTGATTGGTTATACTTGAGCTCAAATACATTGTTATCTGGTTGGCTGCTAAGAAATGTAGTAAAGCCCCCAAAATCCAGAGGCTGGTAACCCCCTTGGCTCTGCAAGATAAGCGAGGATGGATTTCTGAAAAGAAAAAGAGAATTGCCCAAGCCAAGTCAGAAGCAGCCGAGTGTCAGAAGCTTTTGGCATCACGTGTGAAAGAACAACGCGAGCGCCGCAGTGAGAGCTTAGCAAAGAGAAGATCCACGCTCTCTGCTGCCTCCAAGCCTTCTAGTGCTGCTTAGATATACTTTTCTGAAATTTTGTCCGAGTTAGTTGAGCATCGAGCATTCCTGGACACGATCAGTCCATAGATTAGGGAAATTTTGGTTGCCATTACTGAGAGTTGGTTTGATAATTTACTTAACTTTTGGGTTCGCTGGTTTGACCTCTTGTAACATTTGATTGTTTTTTAAGTTAATACTATTCCATACAAATCTAGGCAACATTTGTTACAAGATTTCCCTATTGAATTTCGGTGTTCT

Coding sequence (CDS)

ATGAAACAAGGTGTCTTGACCACTGGCCATGTTCGCCTTTTGCTGCACAGAGGTACTCCTTGTTTTCGTGGTTATGGTAGGAGGAAAGGTAAGAGAAGGAGGAAATCTGTCCGAGGTTGCATTGTTAATCCAGACCTCTCTGTTTTGAATTTGGTGACTGTGAAGAAGGGCGAGAATGACCTACCTGGCCTAACAGGTATTGAGAAGCCAAGAATGCGAGGTCCGAAAAGGGCATCTAAAATCCGGAAACTCTTCAATCTCTCCAAGGATGATGATGTTCGAAAGTATGTCAACACATACCGCAGAACCTTCACAAATAAACTTGGCGGGTTTGCTTACCAGTGTTCTGATACATAG

Protein sequence

MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLGGFAYQCSDT

Homology

[Close]

BLAST of Cucsat.G2293 vs. ExPASy Swiss-Prot
Match: Q9M3V8 (40S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 6.5e-52
Identity = 99/109 (90.83%), Postives = 103/109 (94.50%), Query Frame = 0


Query: 1   MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 60
           MKQGVLT G VRLLLHRGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKGEND
Sbjct: 63  MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 122

Query: 61  LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG 110
           LPGLT +EKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYRRTFTNK G
Sbjct: 123 LPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKG 171

[Close]

BLAST of Cucsat.G2293 vs. ExPASy Swiss-Prot
Match: O48549 (40S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2)

HSP 1 Score: 194.5 bits (493), Expect = 6.7e-49
Identity = 95/109 (87.16%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 1   MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 60
           MKQGVLT G VRLLLHRGTPCFRG+GRR G+RRRKSVRGCIV+PDLSVLNLV VKKGEND
Sbjct: 63  MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 122

Query: 61  LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG 110
           LPGLT  EKPRMRGPKRASKIRKLFNL K+DDVR YVNTYRR FTNK G
Sbjct: 123 LPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKG 171

[Close]

BLAST of Cucsat.G2293 vs. ExPASy Swiss-Prot
Match: P51430 (40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3)

HSP 1 Score: 194.5 bits (493), Expect = 6.7e-49
Identity = 95/109 (87.16%), Postives = 100/109 (91.74%), Query Frame = 0


Query: 1   MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 60
           MKQGVLT G VRLLLHRGTPCFRG+GRR G+RRRKSVRGCIV+PDLSVLNLV VKKG +D
Sbjct: 63  MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGVSD 122

Query: 61  LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG 110
           LPGLT  EKPRMRGPKRASKIRKLFNL K+DDVRKYVNTYRRTFTNK G
Sbjct: 123 LPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKG 171

[Close]

BLAST of Cucsat.G2293 vs. ExPASy Swiss-Prot
Match: P29345 (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV=2)

HSP 1 Score: 156.8 bits (395), Expect = 1.6e-37
Identity = 81/110 (73.64%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 1   MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 60
           MKQGVLT G VRLLL+RGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKGEND
Sbjct: 18  MKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 77

Query: 61  LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLGG 111
           LPGLT  EKPRMRGP+   +   L+   K+DDVRKYVNT    FT K  G
Sbjct: 78  LPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVNT-TAEFTTKWKG 124

[Close]

BLAST of Cucsat.G2293 vs. ExPASy Swiss-Prot
Match: Q5E995 (40S ribosomal protein S6 OS=Bos taurus OX=9913 GN=RPS6 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.8e-30
Identity = 69/97 (71.13%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 1   MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 60
           MKQGVLT G VRLLL +G  C+R   RR G+R+RKSVRGCIV+ +LSVLNLV VKKGE D
Sbjct: 63  MKQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKD 122

Query: 61  LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYV 98
           +PGLT    PR  GPKRAS+IRKLFNLSK+DDVR+YV
Sbjct: 123 IPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157

[Close]

BLAST of Cucsat.G2293 vs. NCBI nr
Match: XP_031742586.1 (LOW QUALITY PROTEIN: 40S ribosomal protein S6-like [Cucumis sativus])

HSP 1 Score: 236 bits (603), Expect = 1.42e-77
Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 1   MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 60
           MKQGVLTTG VRLLLHRGTPCFRGYGRR GKRRRKSVRGCIVNPDLSVLNLVTVKKGEND
Sbjct: 64  MKQGVLTTGRVRLLLHRGTPCFRGYGRRNGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 123

Query: 61  LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLGGFAYQCSDT 118
           LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLGGFAYQCSDT
Sbjct: 124 LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLGGFAYQCSDT 181

[Close]

BLAST of Cucsat.G2293 vs. NCBI nr
Match: XP_038882784.1 (40S ribosomal protein S6-like [Benincasa hispida])

HSP 1 Score: 207 bits (526), Expect = 6.57e-65
Identity = 102/109 (93.58%), Postives = 104/109 (95.41%), Query Frame = 0


Query: 1   MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 60
           MKQGVLTTG VRLLLHRGTPCFRGYGRR G+RRRKSVRGCIVNPDLSVLNLV VKKGEND
Sbjct: 63  MKQGVLTTGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVNPDLSVLNLVIVKKGEND 122

Query: 61  LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG 109
           LPGLT I+KPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNK G
Sbjct: 123 LPGLTDIDKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKAG 171

[Close]

BLAST of Cucsat.G2293 vs. NCBI nr
Match: XP_042446061.1 (40S ribosomal protein S6 [Zingiber officinale] >XP_042449248.1 40S ribosomal protein S6 [Zingiber officinale])

HSP 1 Score: 203 bits (517), Expect = 1.53e-63
Identity = 101/109 (92.66%), Postives = 103/109 (94.50%), Query Frame = 0


Query: 1   MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 60
           MKQGVLTTG VRLLLHRGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKGEND
Sbjct: 63  MKQGVLTTGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 122

Query: 61  LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG 109
           LPGLT IEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFT K G
Sbjct: 123 LPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSG 171

[Close]

BLAST of Cucsat.G2293 vs. NCBI nr
Match: KAG6470668.1 (hypothetical protein ZIOFF_071745 [Zingiber officinale])

HSP 1 Score: 203 bits (517), Expect = 1.84e-63
Identity = 101/109 (92.66%), Postives = 103/109 (94.50%), Query Frame = 0


Query: 1   MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 60
           MKQGVLTTG VRLLLHRGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKGEND
Sbjct: 63  MKQGVLTTGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 122

Query: 61  LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG 109
           LPGLT IEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFT K G
Sbjct: 123 LPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSG 171

[Close]

BLAST of Cucsat.G2293 vs. NCBI nr
Match: PKI39418.1 (hypothetical protein CRG98_040176 [Punica granatum])

HSP 1 Score: 200 bits (508), Expect = 3.65e-63
Identity = 99/109 (90.83%), Postives = 102/109 (93.58%), Query Frame = 0


Query: 1   MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 60
           MKQGVLT G VRLLLHRGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKGEND
Sbjct: 63  MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 122

Query: 61  LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG 109
           LPGLT IEKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYRRTFT K G
Sbjct: 123 LPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTG 171

[Close]

BLAST of Cucsat.G2293 vs. ExPASy TrEMBL
Match: A0A2I0I607 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_040176 PE=3 SV=1)

HSP 1 Score: 200 bits (508), Expect = 1.77e-63
Identity = 99/109 (90.83%), Postives = 102/109 (93.58%), Query Frame = 0


Query: 1   MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 60
           MKQGVLT G VRLLLHRGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKGEND
Sbjct: 63  MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 122

Query: 61  LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG 109
           LPGLT IEKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYRRTFT K G
Sbjct: 123 LPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTG 171

[Close]

BLAST of Cucsat.G2293 vs. ExPASy TrEMBL
Match: V7CMH4 (40S ribosomal protein S6 OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G229900g PE=3 SV=1)

HSP 1 Score: 202 bits (514), Expect = 2.11e-63
Identity = 99/109 (90.83%), Postives = 103/109 (94.50%), Query Frame = 0


Query: 1   MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 60
           MKQGVLT G VRLLLHRGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKG+ND
Sbjct: 63  MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGDND 122

Query: 61  LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG 109
           LPGLT +EKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNK G
Sbjct: 123 LPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKAG 171

[Close]

BLAST of Cucsat.G2293 vs. ExPASy TrEMBL
Match: A0A022QBV4 (40S ribosomal protein S6 OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a012472mg PE=3 SV=1)

HSP 1 Score: 202 bits (514), Expect = 2.11e-63
Identity = 99/109 (90.83%), Postives = 103/109 (94.50%), Query Frame = 0


Query: 1   MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 60
           MKQGVLT G VRLLLHRGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKG+ND
Sbjct: 63  MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGDND 122

Query: 61  LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG 109
           LPGLT +EKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNK G
Sbjct: 123 LPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKAG 171

[Close]

BLAST of Cucsat.G2293 vs. ExPASy TrEMBL
Match: A0A2P2K597 (40S ribosomal protein S6-like OS=Rhizophora mucronata OX=61149 PE=3 SV=1)

HSP 1 Score: 199 bits (507), Expect = 3.04e-63
Identity = 99/109 (90.83%), Postives = 102/109 (93.58%), Query Frame = 0


Query: 1   MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 60
           MKQGVLT G VRLLLHRGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKGEND
Sbjct: 63  MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 122

Query: 61  LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG 109
           LPGLT IEKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYRRTFT K G
Sbjct: 123 LPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSG 171

[Close]

BLAST of Cucsat.G2293 vs. ExPASy TrEMBL
Match: A0A444E4G3 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00031510 PE=3 SV=1)

HSP 1 Score: 199 bits (507), Expect = 3.46e-63
Identity = 99/109 (90.83%), Postives = 102/109 (93.58%), Query Frame = 0


Query: 1   MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 60
           MKQGVLT G VRLLLHRGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKGEND
Sbjct: 1   MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 60

Query: 61  LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG 109
           LPGLT IEKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYRRTFT K G
Sbjct: 61  LPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSG 109

[Close]

BLAST of Cucsat.G2293 vs. TAIR 10
Match: AT4G31700.1 (ribosomal protein S6 )

HSP 1 Score: 194.5 bits (493), Expect = 4.8e-50
Identity = 95/109 (87.16%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 1   MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 60
           MKQGVLT G VRLLLHRGTPCFRG+GRR G+RRRKSVRGCIV+PDLSVLNLV VKKGEND
Sbjct: 63  MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 122

Query: 61  LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG 110
           LPGLT  EKPRMRGPKRASKIRKLFNL K+DDVR YVNTYRR FTNK G
Sbjct: 123 LPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKG 171

[Close]

BLAST of Cucsat.G2293 vs. TAIR 10
Match: AT4G31700.2 (ribosomal protein S6 )

HSP 1 Score: 194.5 bits (493), Expect = 4.8e-50
Identity = 95/109 (87.16%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 1   MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 60
           MKQGVLT G VRLLLHRGTPCFRG+GRR G+RRRKSVRGCIV+PDLSVLNLV VKKGEND
Sbjct: 1   MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 60

Query: 61  LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG 110
           LPGLT  EKPRMRGPKRASKIRKLFNL K+DDVR YVNTYRR FTNK G
Sbjct: 61  LPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKG 109

[Close]

BLAST of Cucsat.G2293 vs. TAIR 10
Match: AT5G10360.1 (Ribosomal protein S6e )

HSP 1 Score: 194.5 bits (493), Expect = 4.8e-50
Identity = 95/109 (87.16%), Postives = 100/109 (91.74%), Query Frame = 0


Query: 1   MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 60
           MKQGVLT G VRLLLHRGTPCFRG+GRR G+RRRKSVRGCIV+PDLSVLNLV VKKG +D
Sbjct: 63  MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGVSD 122

Query: 61  LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG 110
           LPGLT  EKPRMRGPKRASKIRKLFNL K+DDVRKYVNTYRRTFTNK G
Sbjct: 123 LPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKG 171

[Close]

BLAST of Cucsat.G2293 vs. TAIR 10
Match: AT5G10360.2 (Ribosomal protein S6e )

HSP 1 Score: 105.5 bits (262), Expect = 2.9e-23
Identity = 57/91 (62.64%), Postives = 66/91 (72.53%), Query Frame = 0


Query: 1   MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGE-- 60
           MKQGVLT G VRLLLHRGTPCFRG+GRR G+RRRKSVRGCIV+PDLSVLNLV VKKG+  
Sbjct: 63  MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGKKV 122

Query: 61  NDLPGLTGIEKPRMRGPKRASKIRKLFNLSK 90
           +  P +  +  P     KRA    K   ++K
Sbjct: 123 SKAPKIQRLVTPLTLQRKRARIADKKKRIAK 153

The following BLAST results are available for this feature:

BLAST of Cucsat.G2293 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3V8	6.5e-52	90.83	40S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1	[more]
O48549	6.7e-49	87.16	40S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2	[more]
P51430	6.7e-49	87.16	40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3	[more]
P29345	1.6e-37	73.64	40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV...	[more]
Q5E995	1.8e-30	71.13	40S ribosomal protein S6 OS=Bos taurus OX=9913 GN=RPS6 PE=2 SV=1	[more]

BLAST of Cucsat.G2293 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031742586.1	1.42e-77	98.31	LOW QUALITY PROTEIN: 40S ribosomal protein S6-like [Cucumis sativus]	[more]
XP_038882784.1	6.57e-65	93.58	40S ribosomal protein S6-like [Benincasa hispida]	[more]
XP_042446061.1	1.53e-63	92.66	40S ribosomal protein S6 [Zingiber officinale] >XP_042449248.1 40S ribosomal pro...	[more]
KAG6470668.1	1.84e-63	92.66	hypothetical protein ZIOFF_071745 [Zingiber officinale]	[more]
PKI39418.1	3.65e-63	90.83	hypothetical protein CRG98_040176 [Punica granatum]	[more]

BLAST of Cucsat.G2293 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2I0I607	1.77e-63	90.83	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_040176 PE=3 SV=1	[more]
V7CMH4	2.11e-63	90.83	40S ribosomal protein S6 OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G229900g PE=3...	[more]
A0A022QBV4	2.11e-63	90.83	40S ribosomal protein S6 OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a012472mg P...	[more]
A0A2P2K597	3.04e-63	90.83	40S ribosomal protein S6-like OS=Rhizophora mucronata OX=61149 PE=3 SV=1	[more]
A0A444E4G3	3.46e-63	90.83	Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00031510 PE=3 SV=1	[more]

BLAST of Cucsat.G2293 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31700.1	4.8e-50	87.16	ribosomal protein S6	[more]
AT4G31700.2	4.8e-50	87.16	ribosomal protein S6	[more]
AT5G10360.1	4.8e-50	87.16	Ribosomal protein S6e	[more]
AT5G10360.2	2.9e-23	62.64	Ribosomal protein S6e	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001377	Ribosomal protein S6e	SMART	SM01405	Ribosomal_S6e_2	coord: 1..66 e-value: 6.5E-9 score: 45.6
IPR001377	Ribosomal protein S6e	PFAM	PF01092	Ribosomal_S6e	coord: 1..66 e-value: 7.2E-22 score: 77.7
IPR001377	Ribosomal protein S6e	PANTHER	PTHR11502	40S RIBOSOMAL PROTEIN S6	coord: 1..109
None	No IPR available	GENE3D	1.20.5.2650		coord: 71..114 e-value: 5.0E-14 score: 54.5
None	No IPR available	PANTHER	PTHR11502:SF18	40S RIBOSOMAL PROTEIN S6	coord: 1..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G2293.T1	Cucsat.G2293.T1	mRNA
Cucsat.G2293.T4	Cucsat.G2293.T4	mRNA
Cucsat.G2293.T2	Cucsat.G2293.T2	mRNA
Cucsat.G2293.T3	Cucsat.G2293.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome