Cucsat.G2224 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G2224
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	transcription factor HHO5-like
Location	ctg1002: 1517878 .. 1520234 (+)
RNA-Seq Expression	Cucsat.G2224
Synteny	Cucsat.G2224

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGCTCGTGGCTCCCCCTGGCTACTTCATTCATTCATTTAATTAATTAATTAAAAACAGAGAGTGTAAAAAAGAAAAGAAAAAGAAAAGAAAGAGTGTAAACAATTCGCGGCGTGATTAGGATGTAATGGAATCCAAAGATTCGAAGAGCAGCAGGAGGACTCGGCAACTCGACCAAAGGCATTCCATTTCCATTTCCATTTCCACTTCCACTCCCCATTTATTGTCCTTAGATGCGACGACCCGATTTCGTCTCTAAACACACCAAACCTCCCCTCTTCCTTCATCGAATCTTCACCCTCCTGAATCTCCGCCTCTTTATAAATAACACACTCTCCCCATCTCTCTTTCTCTGTCTATTCTCTCTTTTCTCTCTTTTTCAAATGTTTGAGATTAACATTCACACAATTCTACTCACCCACCACTGATTCCCAACCCTCTACTTATACCTCACTATGGAACTCTCCTTAGATTTGTCTTTGGACTTCTCTCCCAAAACCATTCCCCAAATTCTTCTTCAACTTTCCTCCATCTCCGATTCCTTTACTAAGCGATCCAAGCTTGATGATTATCTCAAAAGATTGGAAGATGAAATGAGGAAGATCGATGCTTTTAAACGAGAGCTTCCTCTCTGTGTTCTTCTCTTGCAAGACGGTGGGTGCTTTCTTTTCGAATTCTCATCTCATTTTACAATATGCCTTTCCGCTTTTTTTTCTTTTACCTTTCCATTCCTGGGTTTGCAGCTATTTTGAGATTGAAAGAGGAGGTGTTGCAGTTCAAGGATCAGCCGGTGATTCAAGACTTTATCCCATCCAACCCAGTTTCTGATCAAACTGATGAGGACAACCTGAAGAGGAAGACCAGCAAGTGGTTGAGTTCCGCTCAGTTGTGGAGTACCAATTTCAATTTTGTTGATGATGAAATCTCAGACCCCAAATCAACTATCAACTTGGTAACTTTTGACACAGATTTAATTCTTAAAATTTTTCATCTTTTTTAGTTGAATGGAGGCTTTTTCTTTTTTCGGGATTAAATTTAAATACCTTTAATTACAGAATGGGGATGAAGACGATCGGTCTGTACCACAGACCCCAATTGAAAATTGGAATTGTGCAAAAAGACGAAGAGCATTCGAATTGTTCAAAGATCAAAGCAATTTTGTAAAAAGAGCCACAAAAGAAGATGTAGCGTTTTCCGAAGTCCCTAAACTTACTCTAATGACCCCAATCTCCGATCCTTTTCCTGTTAATTTGACCGTCAAGAACGGCGGCAACGGTGGACGGAACGGCAGAGCTGCTGTTTCTGGGCTATCTTCACCGGCGGGACAAATGAAAGGACAGCCAAAATTATCCCAACAGCAACAGACTATAAGGAAACAAAGACGGTGCTGGTCGCCGGAGCTCCACCGGCGTTTTGTCGACGCACTACATCGACTCGGCGGATCTCAAGGTAAAAAAAAGAAGAACAACACAATCACTCAATTCTGATCCATTTGGAAAACTTTAAATCCTGAGAATCAATTAATCGATCTATTTCAATTCCGCAGTGGCAACACCAAAACAGATAAGGGAATTGATGCAAGTGGACGGCCTCACCAACGATGAAGTGAAAAGCCATTTACAAGTACGATTAATAAAACAAAAACAAAAAAACACAAACAATTTCCGGGTTCGTTTTAAATTCCGAAAGTCTAATCGCAAACTTGTGTAAATCTTGATGGAAACAGAAATACAGACTTCACGTTCGAAAATTGTCACCGGCGGAAGGTTCAAGCGGCGAGAACGAGTTAAAAACAAGTGTAACACACGCGGGATCCCCAGATGGGCCACTCCACGGCGGTGGGTCTGGAAAAGCTCTGTCGACAACAGAAGGGGAAAGTATGGAAGTGGAAGAAGATGCGAAATCGGACGGTCATAGTTGGAAAGGAAGAATTCAGAAACATGGAGATATGTGAGGAATTGAAAAGAAGAAAAAAACAAATGAAATGAAATGGGCGTTTTTCAGTTCCGACAAGTTTTGCAGAGAAATGGATACAAAATGGGGAATCTGAAATTTCTGATTTTGTAGACACAAAAGAATAAGGTATAATTGTAACTTACAAAGTTATTTGTTTTTTTCTTTGTTAAATGTGTAGTAGTAGTAGTAAGTTAAGGCGTATTGGATGATGAGCATGTAACTTTATAAGAAAAAACTGATCTTTTTGAAGAGGAAGTTTTTTTTTTTTTTTTTTTTGCAACTTTTTTCAATGTTGGTGGAGATGGGCGTATTGGCCTCTCATCAATGCAATTGTATTGTAGGAAATAACAAGACATTACAATCTTCTGTCTCAAATCCATCTAAACAAACCTCATCTAATGAATAACAATATTATAGTCTGTTCAGTCCTCGT

Coding sequence (CDS)

ATGCCTTTCCGCTTTTTTTTCTTTTACCTTTCCATTCCTGGGTTTGCAGCTATTTTGAGATTGAAAGAGGAGGTGTTGCAGTTCAAGGATCAGCCGGTGATTCAAGACTTTATCCCATCCAACCCAGTTTCTGATCAAACTGATGAGGACAACCTGAAGAGGAAGACCAGCAAGTGGTTGAGTTCCGCTCAGTTGTGGAGTACCAATTTCAATTTTGTTGATGATGAAATCTCAGACCCCAAATCAACTATCAACTTGAATGGGGATGAAGACGATCGGTCTGTACCACAGACCCCAATTGAAAATTGGAATTGTGCAAAAAGACGAAGAGCATTCGAATTGTTCAAAGATCAAAGCAATTTTGTAAAAAGAGCCACAAAAGAAGATGTAGCGTTTTCCGAAGTCCCTAAACTTACTCTAATGACCCCAATCTCCGATCCTTTTCCTGTTAATTTGACCGTCAAGAACGGCGGCAACGGTGGACGGAACGGCAGAGCTGCTGTTTCTGGGCTATCTTCACCGGCGGGACAAATGAAAGGACAGCCAAAATTATCCCAACAGCAACAGACTATAAGGAAACAAAGACGGTGCTGGTCGCCGGAGCTCCACCGGCGTTTTGTCGACGCACTACATCGACTCGGCGGATCTCAAGTGGCAACACCAAAACAGATAAGGGAATTGATGCAAGTGGACGGCCTCACCAACGATGAAGTGAAAAGCCATTTACAAAAATACAGACTTCACGTTCGAAAATTGTCACCGGCGGAAGGTTCAAGCGGCGAGAACGAGTTAAAAACAAGTGTAACACACGCGGGATCCCCAGATGGGCCACTCCACGGCGGTGGGTCTGGAAAAGCTCTGTCGACAACAGAAGGGGAAAGTATGGAAGTGGAAGAAGATGCGAAATCGGACGGTCATAGTTGGAAAGGAAGAATTCAGAAACATGGAGATATGTGA

Protein sequence

MPFRFFFFYLSIPGFAAILRLKEEVLQFKDQPVIQDFIPSNPVSDQTDEDNLKRKTSKWLSSAQLWSTNFNFVDDEISDPKSTINLNGDEDDRSVPQTPIENWNCAKRRRAFELFKDQSNFVKRATKEDVAFSEVPKLTLMTPISDPFPVNLTVKNGGNGGRNGRAAVSGLSSPAGQMKGQPKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGSSGENELKTSVTHAGSPDGPLHGGGSGKALSTTEGESMEVEEDAKSDGHSWKGRIQKHGDM

Homology

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BLAST of Cucsat.G2224 vs. ExPASy Swiss-Prot
Match: Q9FX84 (Transcription factor HHO6 OS=Arabidopsis thaliana OX=3702 GN=HHO6 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 6.4e-27
Identity = 85/171 (49.71%), Postives = 97/171 (56.73%), Query Frame = 0


Query: 22  RNGRAAVSGLSSPAGQMKGQPKLSQQ-----QQTIRKQRRCWSPELHRRFVDALHRLGGS 81
           R G  A  G +S +      P + QQ     QQ +RKQRRCW+PELHRRFVDAL +LGG 
Sbjct: 156 RKGIVASCGFTSNSMPQPPTPAVPQQPAFLKQQALRKQRRCWNPELHRRFVDALQQLGGP 215

Query: 82  QVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRK-LSPAEGSS---------------- 141
            VATPKQIRE MQ +GLTNDEVKSHLQKYRLH+RK  S AE  S                
Sbjct: 216 GVATPKQIREHMQEEGLTNDEVKSHLQKYRLHIRKPNSNAEKQSAVVLGFNLWNSSAQDE 275

Query: 142 -----GENELKTSVTHAGSPDGPLHGGGSGKALSTTEGE-SMEVEEDAKSD 165
                G   LK S   + SP GPL         +TT G+ SME  EDAKS+
Sbjct: 276 EETCEGGESLKRSNAQSDSPQGPLQ---LPSTTTTTGGDSSMEDVEDAKSE 323

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BLAST of Cucsat.G2224 vs. ExPASy Swiss-Prot
Match: F4JRB0 (Transcription factor HHO5 OS=Arabidopsis thaliana OX=3702 GN=HHO5 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-26
Identity = 77/141 (54.61%), Postives = 91/141 (64.54%), Query Frame = 0


Query: 43  KLSQQQQTIRK--QRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKS 102
           K S Q   I+K  QRR WS ELHR+FVDALHRLGG QVATPKQIR+LM+VDGLTNDEVKS
Sbjct: 205 KPSSQSHHIQKKEQRRRWSQELHRKFVDALHRLGGPQVATPKQIRDLMKVDGLTNDEVKS 264

Query: 103 HLQKYRLHVRK--LSPAEGSSG---------ENELKTSVTHAGSPDGPLHGGG---SGKA 162
           HLQKYR+H+RK  L P +  S          E++   S++ + SP  PL   G   S   
Sbjct: 265 HLQKYRMHIRKHPLHPTKTLSSSDQPGVLERESQSLISLSRSDSPQSPLVARGLFSSNVG 324

Query: 163 LSTTEGESMEVEEDAKSDGHS 168
            S+ E E  E EE+ KSDG S
Sbjct: 325 HSSEEDEEEEDEEEEKSDGRS 345

[Close]

BLAST of Cucsat.G2224 vs. ExPASy Swiss-Prot
Match: Q9ZQ85 (Myb family transcription factor EFM OS=Arabidopsis thaliana OX=3702 GN=EFM PE=1 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 3.5e-25
Identity = 63/105 (60.00%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 16  NGGNGGRNGRAAVSGLSSPAGQMKGQPKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGG 75
           N  N   N  +  +G+SS   Q              RK RRCWSP+LHRRFV AL  LGG
Sbjct: 208 NNYNNNNNNNSNSNGVSSTTSQSN------------RKARRCWSPDLHRRFVQALQMLGG 267

Query: 76  SQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGSSG 121
           SQVATPKQIRELM+VDGLTNDEVKSHLQKYRLH R+ SP+  +SG
Sbjct: 268 SQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQTSG 300

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BLAST of Cucsat.G2224 vs. ExPASy Swiss-Prot
Match: Q9FPE8 (Transcription factor HHO3 OS=Arabidopsis thaliana OX=3702 GN=HHO3 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-24
Identity = 61/94 (64.89%), Postives = 73/94 (77.66%), Query Frame = 0


Query: 32  SSPAGQMKGQPKLSQQQQ--TIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQ 91
           SS A  + G  +  +Q+Q  + RKQRRCWSPELHRRF+ AL +LGGS VATPKQIR+LM+
Sbjct: 186 SSTAETVGGGKEFEEQKQSHSNRKQRRCWSPELHRRFLHALQQLGGSHVATPKQIRDLMK 245

Query: 92  VDGLTNDEVKSHLQKYRLHVRK-LSPAEGSSGEN 123
           VDGLTNDEVKSHLQKYRLH R+  +P   + GEN
Sbjct: 246 VDGLTNDEVKSHLQKYRLHTRRPATPVVRTGGEN 279

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BLAST of Cucsat.G2224 vs. ExPASy Swiss-Prot
Match: Q5VRW2 (Transcription factor NIGTH1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHO1 PE=1 SV=2)

HSP 1 Score: 112.5 bits (280), Expect = 5.1e-24
Identity = 60/91 (65.93%), Postives = 68/91 (74.73%), Query Frame = 0


Query: 25  RAAVSGLSSPAGQMKGQPKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQI 84
           R A +G   P+    GQ  +    Q  RK RRCWSPELHRRFV+AL  LGG+QVATPKQI
Sbjct: 239 REAQNGGKPPSTPSDGQ-AVPPPPQPHRKARRCWSPELHRRFVNALQILGGAQVATPKQI 298

Query: 85  RELMQVDGLTNDEVKSHLQKYRLHVRKLSPA 116
           RELM+VDGLTNDEVKSHLQKYRLH R+  P+
Sbjct: 299 RELMKVDGLTNDEVKSHLQKYRLHTRRPMPS 328

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BLAST of Cucsat.G2224 vs. NCBI nr
Match: XP_004141926.1 (transcription factor HHO5 [Cucumis sativus] >KGN48504.1 hypothetical protein Csa_004116 [Cucumis sativus])

HSP 1 Score: 356 bits (913), Expect = 5.98e-121
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MTPISDPFPVNLTVKNGGNGGRNGRAAVSGLSSPAGQMKGQPKLSQQQQTIRKQRRCWSP 60
           MTPISDPFPVNLTVKNGGNGGRNGRAAVSGLSSPAGQMKGQPKLSQQQQTIRKQRRCWSP
Sbjct: 191 MTPISDPFPVNLTVKNGGNGGRNGRAAVSGLSSPAGQMKGQPKLSQQQQTIRKQRRCWSP 250

Query: 61  ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGSSG 120
           ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGSSG
Sbjct: 251 ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGSSG 310

Query: 121 ENELKTSVTHAGSPDGPLHGGGSGKALSTTEGESMEVEEDAKSDGHSWKGRIQKHGDM 178
           ENELKTSVTHAGSPDGPLHGGGSGKALSTTEGESMEVEEDAKSDGHSWKGRIQKHGDM
Sbjct: 311 ENELKTSVTHAGSPDGPLHGGGSGKALSTTEGESMEVEEDAKSDGHSWKGRIQKHGDM 368

[Close]

BLAST of Cucsat.G2224 vs. NCBI nr
Match: XP_008440244.1 (PREDICTED: uncharacterized protein LOC103484758 [Cucumis melo])

HSP 1 Score: 353 bits (905), Expect = 9.82e-120
Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MTPISDPFPVNLTVKNGGNGGRNGRAAVSGLSSPAGQMKGQPKLSQQQQTIRKQRRCWSP 60
           MTPISDPFPVNLTVKNGGNGGRNGRAAVSGLSSPAGQMKGQ KLSQQQQTIRKQRRCWSP
Sbjct: 191 MTPISDPFPVNLTVKNGGNGGRNGRAAVSGLSSPAGQMKGQAKLSQQQQTIRKQRRCWSP 250

Query: 61  ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGSSG 120
           ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGSSG
Sbjct: 251 ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGSSG 310

Query: 121 ENELKTSVTHAGSPDGPLHGGGSGKALSTTEGESMEVEEDAKSDGHSWKGRIQKHGDM 178
           ENELKTSVTHAGSPDGPLHGGGSGKALSTTEGESMEVEEDAKSDGHSWKGRIQKHGDM
Sbjct: 311 ENELKTSVTHAGSPDGPLHGGGSGKALSTTEGESMEVEEDAKSDGHSWKGRIQKHGDM 368

[Close]

BLAST of Cucsat.G2224 vs. NCBI nr
Match: XP_038881045.1 (transcription factor HHO5 [Benincasa hispida])

HSP 1 Score: 323 bits (827), Expect = 1.04e-107
Identity = 166/188 (88.30%), Postives = 171/188 (90.96%), Query Frame = 0


Query: 1   MTPISDPFPVNLTVKNGGNGGRNGRAAVSGLSSPAGQMKGQPKLSQQQQTIRKQRRCWSP 60
           MTPISDPFPV+LTVK+GG GGR+GRAAVSGLSSPA QMKGQ KLSQQQQTIRKQRRCWSP
Sbjct: 194 MTPISDPFPVSLTVKSGGGGGRSGRAAVSGLSSPAAQMKGQAKLSQQQQTIRKQRRCWSP 253

Query: 61  ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGSSG 120
           ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSP EGS+G
Sbjct: 254 ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPPEGSNG 313

Query: 121 E----------NELKTSVTHAGSPDGPLHGGGSGKALSTTEGESMEVEEDAKSDGHSWKG 178
           E          N LKTSVTHAGSPDGPLHGGGSGKALS TEGESME EEDAKSDGHSWKG
Sbjct: 314 EGWIPGEHGGENHLKTSVTHAGSPDGPLHGGGSGKALSITEGESMEGEEDAKSDGHSWKG 373

[Close]

BLAST of Cucsat.G2224 vs. NCBI nr
Match: XP_023543987.1 (myb family transcription factor EFM-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290 bits (742), Expect = 4.78e-96
Identity = 155/190 (81.58%), Postives = 162/190 (85.26%), Query Frame = 0


Query: 1   MTPISDPFPVN--LTVKNGGNGGRNGRAAVSGLSSPAGQMKGQPKLSQQQQTIRKQRRCW 60
           MT ISDPFPVN  LTVKNG  GGR+GRAAVSG SSPA Q+ GQ KLSQQQQTIRKQRRCW
Sbjct: 104 MTTISDPFPVNVNLTVKNGRVGGRSGRAAVSGSSSPAVQINGQTKLSQQQQTIRKQRRCW 163

Query: 61  SPELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGS 120
           SP LHRRF+DALHRLGGSQVATPKQI+ELMQVDGLTNDEVKSHLQKYRLHVRKL+P EGS
Sbjct: 164 SPGLHRRFIDALHRLGGSQVATPKQIKELMQVDGLTNDEVKSHLQKYRLHVRKLAPQEGS 223

Query: 121 SGENEL----------KTSVTHAGSPDGPLHGGGSGKALSTTEGESMEVEEDAKSDGHSW 178
           SGE  +          KTS T AGSPDGPL GGGSGKALS TEGESME EEDAKSDGHSW
Sbjct: 224 SGEGWIPGEHDGEHHSKTSGTQAGSPDGPLQGGGSGKALSITEGESMEGEEDAKSDGHSW 283

[Close]

BLAST of Cucsat.G2224 vs. NCBI nr
Match: XP_023522949.1 (transcription factor HHO5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 285 bits (729), Expect = 7.00e-93
Identity = 154/189 (81.48%), Postives = 160/189 (84.66%), Query Frame = 0


Query: 1   MTPISDPFPVN--LTVKNGGNGGRNGRAAVSGLSSPAGQMKGQPKLSQQQQTIRKQRRCW 60
           MT ISDPFPVN  LTVKNG  GGR+GRAAVSG SSPA Q+ GQ KLSQQQQTIRKQRRCW
Sbjct: 191 MTTISDPFPVNVNLTVKNGRVGGRSGRAAVSGSSSPAVQINGQTKLSQQQQTIRKQRRCW 250

Query: 61  SPELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGS 120
           SP LHRRF+DALHRLGGSQVATPKQI+ELMQVDGLTNDEVKSHLQKYRLHVRKL+P EGS
Sbjct: 251 SPGLHRRFIDALHRLGGSQVATPKQIKELMQVDGLTNDEVKSHLQKYRLHVRKLAPQEGS 310

Query: 121 SGENEL----------KTSVTHAGSPDGPLHGGGSGKALSTTEGESMEVEEDAKSDGHSW 177
           SGE  +          KTS T AGSPDGPL GGGSGKALS TEGESME EEDAKSDGHSW
Sbjct: 311 SGEGWIPGEHEGEHHSKTSGTQAGSPDGPLQGGGSGKALSITEGESMEGEEDAKSDGHSW 370

[Close]

BLAST of Cucsat.G2224 vs. ExPASy TrEMBL
Match: A0A0A0KIA9 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G490190 PE=4 SV=1)

HSP 1 Score: 356 bits (913), Expect = 2.89e-121
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MTPISDPFPVNLTVKNGGNGGRNGRAAVSGLSSPAGQMKGQPKLSQQQQTIRKQRRCWSP 60
           MTPISDPFPVNLTVKNGGNGGRNGRAAVSGLSSPAGQMKGQPKLSQQQQTIRKQRRCWSP
Sbjct: 191 MTPISDPFPVNLTVKNGGNGGRNGRAAVSGLSSPAGQMKGQPKLSQQQQTIRKQRRCWSP 250

Query: 61  ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGSSG 120
           ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGSSG
Sbjct: 251 ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGSSG 310

Query: 121 ENELKTSVTHAGSPDGPLHGGGSGKALSTTEGESMEVEEDAKSDGHSWKGRIQKHGDM 178
           ENELKTSVTHAGSPDGPLHGGGSGKALSTTEGESMEVEEDAKSDGHSWKGRIQKHGDM
Sbjct: 311 ENELKTSVTHAGSPDGPLHGGGSGKALSTTEGESMEVEEDAKSDGHSWKGRIQKHGDM 368

[Close]

BLAST of Cucsat.G2224 vs. ExPASy TrEMBL
Match: A0A1S3B0P5 (uncharacterized protein LOC103484758 OS=Cucumis melo OX=3656 GN=LOC103484758 PE=4 SV=1)

HSP 1 Score: 353 bits (905), Expect = 4.75e-120
Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MTPISDPFPVNLTVKNGGNGGRNGRAAVSGLSSPAGQMKGQPKLSQQQQTIRKQRRCWSP 60
           MTPISDPFPVNLTVKNGGNGGRNGRAAVSGLSSPAGQMKGQ KLSQQQQTIRKQRRCWSP
Sbjct: 191 MTPISDPFPVNLTVKNGGNGGRNGRAAVSGLSSPAGQMKGQAKLSQQQQTIRKQRRCWSP 250

Query: 61  ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGSSG 120
           ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGSSG
Sbjct: 251 ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGSSG 310

Query: 121 ENELKTSVTHAGSPDGPLHGGGSGKALSTTEGESMEVEEDAKSDGHSWKGRIQKHGDM 178
           ENELKTSVTHAGSPDGPLHGGGSGKALSTTEGESMEVEEDAKSDGHSWKGRIQKHGDM
Sbjct: 311 ENELKTSVTHAGSPDGPLHGGGSGKALSTTEGESMEVEEDAKSDGHSWKGRIQKHGDM 368

[Close]

BLAST of Cucsat.G2224 vs. ExPASy TrEMBL
Match: A0A6J1GGX4 (transcription factor HHO5-like OS=Cucurbita moschata OX=3662 GN=LOC111453805 PE=4 SV=1)

HSP 1 Score: 284 bits (726), Expect = 9.94e-93
Identity = 153/190 (80.53%), Postives = 159/190 (83.68%), Query Frame = 0


Query: 1   MTPISDPFPVN--LTVKNGGNGGRNGRAAVSGLSSPAGQMKGQPKLSQQQQTIRKQRRCW 60
           MT ISDPFPVN  LTVKNG   GR+GRAAVSG SSPA Q+ GQ KLSQQQQTIRKQRRCW
Sbjct: 191 MTTISDPFPVNVNLTVKNGRVSGRSGRAAVSGSSSPAVQINGQTKLSQQQQTIRKQRRCW 250

Query: 61  SPELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGS 120
           SP LHRRF+DALHRLGGSQVATPKQI+ELMQVDGLTNDEVKSHLQKYRLHVRKL P EGS
Sbjct: 251 SPGLHRRFIDALHRLGGSQVATPKQIKELMQVDGLTNDEVKSHLQKYRLHVRKLGPQEGS 310

Query: 121 SGENEL----------KTSVTHAGSPDGPLHGGGSGKALSTTEGESMEVEEDAKSDGHSW 178
           SGE  +          KTS T AGSPDGPL GGGS KALS TEGESME EEDAKSDGHSW
Sbjct: 311 SGEGWIPGEHDGEHHSKTSGTQAGSPDGPLQGGGSVKALSITEGESMEGEEDAKSDGHSW 370

[Close]

BLAST of Cucsat.G2224 vs. ExPASy TrEMBL
Match: A0A6J1IIT1 (transcription factor HHO5-like OS=Cucurbita maxima OX=3661 GN=LOC111477839 PE=4 SV=1)

HSP 1 Score: 280 bits (717), Expect = 2.29e-91
Identity = 151/188 (80.32%), Postives = 157/188 (83.51%), Query Frame = 0


Query: 1   MTPISDPFPVN--LTVKNGGNGGRNGRAAVSGLSSPAGQMKGQPKLSQQQQTIRKQRRCW 60
           MT ISDPFPVN  LTVKNG   GR+GRAAVSG SSP  Q+ GQ KLSQQQ TIRKQRRCW
Sbjct: 191 MTTISDPFPVNVNLTVKNGRVSGRSGRAAVSGSSSPVVQINGQTKLSQQQHTIRKQRRCW 250

Query: 61  SPELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGS 120
           SP LHRRF+DALHRLGGSQVATPKQI+ELMQVDGLTNDEVKSHLQKYRLHVRKL+P EGS
Sbjct: 251 SPGLHRRFIDALHRLGGSQVATPKQIKELMQVDGLTNDEVKSHLQKYRLHVRKLAPQEGS 310

Query: 121 SGENEL----------KTSVTHAGSPDGPLHGGGSGKALSTTEGESMEVEEDAKSDGHSW 176
           SGE  +          KTS T AGSPDGPL GGGSGKALS TEGESME EEDAKSDGHSW
Sbjct: 311 SGEGWIPGEHEGEHHSKTSGTLAGSPDGPLQGGGSGKALSITEGESMEGEEDAKSDGHSW 370

[Close]

BLAST of Cucsat.G2224 vs. ExPASy TrEMBL
Match: A0A6J1HJL6 (transcription factor HHO5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463537 PE=4 SV=1)

HSP 1 Score: 278 bits (712), Expect = 1.16e-90
Identity = 148/187 (79.14%), Postives = 154/187 (82.35%), Query Frame = 0


Query: 1   MTPISDPFPVNLTVKNGGNGGRNGRAAVSGLSSPAGQMKGQPKLSQQQQTIRKQRRCWSP 60
           MTPISDPF  NLT+KNG    R   A+VSGLSSPA Q+ G PKLSQ QQTIRKQRRCWSP
Sbjct: 192 MTPISDPFSGNLTLKNGT--ARGSSASVSGLSSPAAQITGHPKLSQHQQTIRKQRRCWSP 251

Query: 61  ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGSSG 120
           ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKL P EGS G
Sbjct: 252 ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLGPTEGSGG 311

Query: 121 ----------ENELKTSVTHAGSPDGPLHGGGSGKALSTTEGESMEVEEDAKSDGHSWKG 177
                     ++  KTS THAGSPDGPL GGGSGKALS TEGESME EEDAKS+GHSWKG
Sbjct: 312 GGWMAEAHQGDHRSKTSATHAGSPDGPLQGGGSGKALSITEGESMEGEEDAKSEGHSWKG 371

[Close]

BLAST of Cucsat.G2224 vs. TAIR 10
Match: AT1G49560.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 4.5e-28
Identity = 85/171 (49.71%), Postives = 97/171 (56.73%), Query Frame = 0


Query: 22  RNGRAAVSGLSSPAGQMKGQPKLSQQ-----QQTIRKQRRCWSPELHRRFVDALHRLGGS 81
           R G  A  G +S +      P + QQ     QQ +RKQRRCW+PELHRRFVDAL +LGG 
Sbjct: 156 RKGIVASCGFTSNSMPQPPTPAVPQQPAFLKQQALRKQRRCWNPELHRRFVDALQQLGGP 215

Query: 82  QVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRK-LSPAEGSS---------------- 141
            VATPKQIRE MQ +GLTNDEVKSHLQKYRLH+RK  S AE  S                
Sbjct: 216 GVATPKQIREHMQEEGLTNDEVKSHLQKYRLHIRKPNSNAEKQSAVVLGFNLWNSSAQDE 275

Query: 142 -----GENELKTSVTHAGSPDGPLHGGGSGKALSTTEGE-SMEVEEDAKSD 165
                G   LK S   + SP GPL         +TT G+ SME  EDAKS+
Sbjct: 276 EETCEGGESLKRSNAQSDSPQGPLQ---LPSTTTTTGGDSSMEDVEDAKSE 323

[Close]

BLAST of Cucsat.G2224 vs. TAIR 10
Match: AT4G37180.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 7.7e-28
Identity = 77/141 (54.61%), Postives = 91/141 (64.54%), Query Frame = 0


Query: 43  KLSQQQQTIRK--QRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKS 102
           K S Q   I+K  QRR WS ELHR+FVDALHRLGG QVATPKQIR+LM+VDGLTNDEVKS
Sbjct: 205 KPSSQSHHIQKKEQRRRWSQELHRKFVDALHRLGGPQVATPKQIRDLMKVDGLTNDEVKS 264

Query: 103 HLQKYRLHVRK--LSPAEGSSG---------ENELKTSVTHAGSPDGPLHGGG---SGKA 162
           HLQKYR+H+RK  L P +  S          E++   S++ + SP  PL   G   S   
Sbjct: 265 HLQKYRMHIRKHPLHPTKTLSSSDQPGVLERESQSLISLSRSDSPQSPLVARGLFSSNVG 324

Query: 163 LSTTEGESMEVEEDAKSDGHS 168
            S+ E E  E EE+ KSDG S
Sbjct: 325 HSSEEDEEEEDEEEEKSDGRS 345

[Close]

BLAST of Cucsat.G2224 vs. TAIR 10
Match: AT4G37180.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 7.7e-28
Identity = 77/141 (54.61%), Postives = 91/141 (64.54%), Query Frame = 0


Query: 43  KLSQQQQTIRK--QRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKS 102
           K S Q   I+K  QRR WS ELHR+FVDALHRLGG QVATPKQIR+LM+VDGLTNDEVKS
Sbjct: 198 KPSSQSHHIQKKEQRRRWSQELHRKFVDALHRLGGPQVATPKQIRDLMKVDGLTNDEVKS 257

Query: 103 HLQKYRLHVRK--LSPAEGSSG---------ENELKTSVTHAGSPDGPLHGGG---SGKA 162
           HLQKYR+H+RK  L P +  S          E++   S++ + SP  PL   G   S   
Sbjct: 258 HLQKYRMHIRKHPLHPTKTLSSSDQPGVLERESQSLISLSRSDSPQSPLVARGLFSSNVG 317

Query: 163 LSTTEGESMEVEEDAKSDGHS 168
            S+ E E  E EE+ KSDG S
Sbjct: 318 HSSEEDEEEEDEEEEKSDGRS 338

[Close]

BLAST of Cucsat.G2224 vs. TAIR 10
Match: AT2G03500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 2.5e-26
Identity = 63/105 (60.00%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 16  NGGNGGRNGRAAVSGLSSPAGQMKGQPKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGG 75
           N  N   N  +  +G+SS   Q              RK RRCWSP+LHRRFV AL  LGG
Sbjct: 208 NNYNNNNNNNSNSNGVSSTTSQSN------------RKARRCWSPDLHRRFVQALQMLGG 267

Query: 76  SQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVRKLSPAEGSSG 121
           SQVATPKQIRELM+VDGLTNDEVKSHLQKYRLH R+ SP+  +SG
Sbjct: 268 SQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQTSG 300

[Close]

BLAST of Cucsat.G2224 vs. TAIR 10
Match: AT1G25550.1 (myb-like transcription factor family protein )

HSP 1 Score: 114.4 bits (285), Expect = 9.5e-26
Identity = 61/94 (64.89%), Postives = 73/94 (77.66%), Query Frame = 0


Query: 32  SSPAGQMKGQPKLSQQQQ--TIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQ 91
           SS A  + G  +  +Q+Q  + RKQRRCWSPELHRRF+ AL +LGGS VATPKQIR+LM+
Sbjct: 186 SSTAETVGGGKEFEEQKQSHSNRKQRRCWSPELHRRFLHALQQLGGSHVATPKQIRDLMK 245

Query: 92  VDGLTNDEVKSHLQKYRLHVRK-LSPAEGSSGEN 123
           VDGLTNDEVKSHLQKYRLH R+  +P   + GEN
Sbjct: 246 VDGLTNDEVKSHLQKYRLHTRRPATPVVRTGGEN 279

The following BLAST results are available for this feature:

BLAST of Cucsat.G2224 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FX84	6.4e-27	49.71	Transcription factor HHO6 OS=Arabidopsis thaliana OX=3702 GN=HHO6 PE=2 SV=1	[more]
F4JRB0	1.1e-26	54.61	Transcription factor HHO5 OS=Arabidopsis thaliana OX=3702 GN=HHO5 PE=1 SV=1	[more]
Q9ZQ85	3.5e-25	60.00	Myb family transcription factor EFM OS=Arabidopsis thaliana OX=3702 GN=EFM PE=1 ...	[more]
Q9FPE8	1.3e-24	64.89	Transcription factor HHO3 OS=Arabidopsis thaliana OX=3702 GN=HHO3 PE=1 SV=1	[more]
Q5VRW2	5.1e-24	65.93	Transcription factor NIGTH1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHO1 PE=...	[more]

BLAST of Cucsat.G2224 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141926.1	5.98e-121	100.00	transcription factor HHO5 [Cucumis sativus] >KGN48504.1 hypothetical protein Csa...	[more]
XP_008440244.1	9.82e-120	99.44	PREDICTED: uncharacterized protein LOC103484758 [Cucumis melo]	[more]
XP_038881045.1	1.04e-107	88.30	transcription factor HHO5 [Benincasa hispida]	[more]
XP_023543987.1	4.78e-96	81.58	myb family transcription factor EFM-like [Cucurbita pepo subsp. pepo]	[more]
XP_023522949.1	7.00e-93	81.48	transcription factor HHO5-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G2224 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIA9	2.89e-121	100.00	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G49019...	[more]
A0A1S3B0P5	4.75e-120	99.44	uncharacterized protein LOC103484758 OS=Cucumis melo OX=3656 GN=LOC103484758 PE=...	[more]
A0A6J1GGX4	9.94e-93	80.53	transcription factor HHO5-like OS=Cucurbita moschata OX=3662 GN=LOC111453805 PE=...	[more]
A0A6J1IIT1	2.29e-91	80.32	transcription factor HHO5-like OS=Cucurbita maxima OX=3661 GN=LOC111477839 PE=4 ...	[more]
A0A6J1HJL6	1.16e-90	79.14	transcription factor HHO5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of Cucsat.G2224 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49560.1	4.5e-28	49.71	Homeodomain-like superfamily protein	[more]
AT4G37180.2	7.7e-28	54.61	Homeodomain-like superfamily protein	[more]
AT4G37180.1	7.7e-28	54.61	Homeodomain-like superfamily protein	[more]
AT2G03500.1	2.5e-26	60.00	Homeodomain-like superfamily protein	[more]
AT1G25550.1	9.5e-26	64.89	myb-like transcription factor family protein	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G2224.T2	Cucsat.G2224.T2	mRNA
Cucsat.G2224.T7	Cucsat.G2224.T7	mRNA
Cucsat.G2224.T5	Cucsat.G2224.T5	mRNA
Cucsat.G2224.T4	Cucsat.G2224.T4	mRNA
Cucsat.G2224.T3	Cucsat.G2224.T3	mRNA
Cucsat.G2224.T1	Cucsat.G2224.T1	mRNA
Cucsat.G2224.T6	Cucsat.G2224.T6	mRNA
Cucsat.G2224.T8	Cucsat.G2224.T8	mRNA
Cucsat.G2224.T11	Cucsat.G2224.T11	mRNA
Cucsat.G2224.T9	Cucsat.G2224.T9	mRNA
Cucsat.G2224.T10	Cucsat.G2224.T10	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity