Cucsat.G21565 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G21565
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Unknown protein
Location	ctg944: 220559 .. 223162 (-)
RNA-Seq Expression	Cucsat.G21565
Synteny	Cucsat.G21565

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTTTCGCCTCTCAATCTCCGAACTCCTTGAACTTCCTTCTCCAGACGACGACGAGGTCCATCATCGGCACTGCCCCCTCGTGGCCATCTCCCCACTCCAACGCCGCCTGTACCTCTTCTACTACACGACAAACGGGCTACGACCACTCTTTGGAGTCTACCATTGAAGCCTCCAAATCTCGCCTTTCTCAGATTCGTTCCACCTCTTATCCTCATTTCCAAAAGGCAATTGTAATTTCTTCATCCCTTATTATTACTATTGTTTTTTTCTTACCTCTCCTGTTGTTCTTTGTTTAGTTTCCAATTAAGGATGAATGTTTGTTTAGGTCTCTAAGAGAAAGGGTTCAAAGGTTTTGAATCGTTACTCTCTGTACTTTTCTTTGAGTAAGTCATCCTAAAAAAGATAATTTTATAGCATTTGAATAAAGCTTTAGGCTATTTGCTAGATTGCAAAGTGGTTTCTGGACACAAAATCCCATGGTCGAAATTTAAGAAGAATCGAGTTCTTGCTCCTGCCAATTTTTTCAATTAAATTTGAAACTCAATTCTCAACATTGCATCTAAGATATGTTCTTCACAAATTTTTGTATTTATTCCTTAATTTTTCTAGATTTCTGGCTGCCACAAAGTAAATGAATATTCTTTCTTTTGTGTTGCCTACCAATTGTTTGATGAAATGCCCATGGGAGGAAATCCTGATTATTGAATGTACATAGGAGGAAATCATTTTAGAATGTTATTATAGTGGAATCCTAGTGAACTAGATTTTATTTTAATGGTTCTAATTTTATTAGTTAACTTTCTTTTGAGGTAGGGGAAACATAATCATAATTCTTTATGATTAGTTATCATGTTTTTACTTGGAGAATATTGACTTTTTGTTGATACTTAAATCATGTTCTTAGTGATGGTGCCAGTTCCTTCCTATTTTCCTACTCCATCTCTCTAGTGTGTGTGTTTGCTTTGATCAATTAATGTGGTACATATCTGGTGGTATTTTATTTAGGTTTGTGATTTTGGACTTTCACGCTTGAAGTCCTTTATCAAACTCCTTTTAAAGGTAAAGTTTGTTGTAAACTCTTTTGAAAAACTTGTTTTAATTAATTAAATTTATGTTTCAAACTTTGAATTTCTCTCTATTATATATGTATATATGCTTGTAAATTAAATTTAATTAGATTGATCGAACAAGATTTAAAGACGTATAATTGGATATTTTGACATCATTTTCAACGTCATTTGTTCTTCACAGGTGAGTAAATAATTGTTAATTCCCCTCTATTGCGAAACTCATTTTATTTTATAAACAAATTTAGATGCTAAATCATTTGAGTTGATAGTAATCATAATATAATATATAACTCTAATTACAATATTGTTGTTGTTTGATTATTTTGTACATATATGGTGTGATACTTCAAATCCTAATTTATTTTGATCTTGTTATATATATACTCTTCTAATTCAAAAGTTAGATCAATATATGTATATATATGTGTTATGTATTAAAAATGTTAAAAACACGACACTTCTTTTGTCTAAACTTTAGCTTTCTTTATAACTAACTATTCATTCTTTTTTGGGAATATTTTGGAAAATATGGGAAATTACATATTAGTGCATGGTTGATGGGCTTCAAAGCTGTACAAACCAAGGTGTAAAGTAGAAACACTCTAGTCCTACCAAATTTATAGCACACAGTTCTCTTGTCTTCCTTTCTTTCTTATATAAGCGACTTTTTTTTAGTTGTGCTTATTTTTGTCTAAACAATTTTGGTGAAAAGAATAAAAAGAATAACAGGGAAGAAGACAATGCAACTCATTCAGGCGGATTGTGATTTAGAAGATATATGTCGTGTATGAGTGTTCTATCTCTTTTATGCGTTGTTGATTAATTAATTAATTAGTCTGGCCACATTTTCAGTTAGCTAGCTTTAGATCTGTCTCTTTTCAATAGAATGGAAAAGATCCATTTGTAAAAGATTAGATTTACAGATTTGACATAATTCTTTTCAATTGAGATCCTCTTTATGGTTCTCCCCCAACATGGATCACTTAGCGGTGTCAAGCATTGTTCCTGGTGGTTCATTACCTAATATATTTTTCCCAAAGATACATGCCAAGAGCCAGATTTTCTGTTAGTATTATTTTATGATCTCAATAGTCTCTCTCTTGAGAAATGAGAATATTGATCTGGAAGTATAAATTCTAATTGCCCATAGTATAGATCCCAATGTATATCACTTTTATCGAGACTAGATGTTGTCTTTCTATTACCACTATTTATGAAACTGATATGACAATGAAAGTTCTAATGGACCAGTTGAGACATAGGATATAAATAATGCAACTTTATAGATCACAGAGAAAAATTATTTCATCTTATAAGTTATATTAAGTTGAAGGTAGTGACTCTCTTATCTTAACCTTTTTTAGCAAAGGAAAAAAAGGAAAGAAAAACCCAAATCAATATCATCAACCATGAACCCCATAAAGTCATTTTACGTACACTGAAAAAGTTGCATTCAAAATGGCTTGGGTCTAAGTTGAAGATATTACAAAGAGCAATTTCTAAATTGGCAATATGGTCGTAATGCAGCCACA

Coding sequence (CDS)

CCTTTCGCCTCTCAATCTCCGAACTCCTTGAACTTCCTTCTCCAGACGACGACGAGGTCCATCATCGGCACTGCCCCCTCGTGGCCATCTCCCCACTCCAACGCCGCCTGTACCTCTTCTACTACACGACAAACGGGCTACGACCACTCTTTGGAGTCTACCATTGAAGCCTCCAAATCTCGCCTTTCTCAGATTCGTTCCACCTCTTATCCTCATTTCCAAAAGGCAATTCAAAGGAAAAAAAGGAAAGAAAAACCCAAATCAATATCATCAACCATGAACCCCATAAAGTCATTTTACGTACACTGA

Protein sequence

PFASQSPNSLNFLLQTTTRSIIGTAPSWPSPHSNAACTSSTTRQTGYDHSLESTIEASKSRLSQIRSTSYPHFQKAIQRKKRKEKPKSISSTMNPIKSFYVH

Homology

[Close]

BLAST of Cucsat.G21565 vs. NCBI nr
Match: TYK24760.1 (uncharacterized protein E5676_scaffold266G003230 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 1.66e-07
Identity = 30/34 (88.24%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 44 QTGYDHSLESTIEASKSRLSQIRSTSYPHFQKAI 77
          Q   DHSLES IEASKSRLSQIRSTSYPHFQKAI
Sbjct: 48 QRAIDHSLESAIEASKSRLSQIRSTSYPHFQKAI 81

[Close]

BLAST of Cucsat.G21565 vs. NCBI nr
Match: XP_008459726.1 (PREDICTED: uncharacterized protein LOC103498769 [Cucumis melo])

HSP 1 Score: 58.5 bits (140), Expect = 1.68e-07
Identity = 30/34 (88.24%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 44 QTGYDHSLESTIEASKSRLSQIRSTSYPHFQKAI 77
          Q   DHSLES IEASKSRLSQIRSTSYPHFQKAI
Sbjct: 50 QRAIDHSLESAIEASKSRLSQIRSTSYPHFQKAI 83

[Close]

BLAST of Cucsat.G21565 vs. NCBI nr
Match: KAG6575225.1 (RGS1-HXK1-interacting protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 56.2 bits (134), Expect = 1.15e-06
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 44 QTGYDHSLESTIEASKSRLSQIRSTSYPHFQKAI 77
          Q   +HSLES +EASKSRLSQIRSTSYPHFQKAI
Sbjct: 48 QLAINHSLESAVEASKSRLSQIRSTSYPHFQKAI 81

[Close]

BLAST of Cucsat.G21565 vs. NCBI nr
Match: XP_022959270.1 (uncharacterized protein LOC111460300 [Cucurbita moschata])

HSP 1 Score: 56.2 bits (134), Expect = 1.16e-06
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 44 QTGYDHSLESTIEASKSRLSQIRSTSYPHFQKAI 77
          Q   +HSLES +EASKSRLSQIRSTSYPHFQKAI
Sbjct: 50 QLAINHSLESAVEASKSRLSQIRSTSYPHFQKAI 83

[Close]

BLAST of Cucsat.G21565 vs. NCBI nr
Match: XP_023006638.1 (uncharacterized protein LOC111499304 [Cucurbita maxima])

HSP 1 Score: 56.2 bits (134), Expect = 1.16e-06
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 44 QTGYDHSLESTIEASKSRLSQIRSTSYPHFQKAI 77
          Q   +HSLES +EASKSRLSQIRSTSYPHFQKAI
Sbjct: 50 QLAINHSLESAVEASKSRLSQIRSTSYPHFQKAI 83

[Close]

BLAST of Cucsat.G21565 vs. ExPASy TrEMBL
Match: A0A5D3DNB0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003230 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 8.04e-08
Identity = 30/34 (88.24%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 44 QTGYDHSLESTIEASKSRLSQIRSTSYPHFQKAI 77
          Q   DHSLES IEASKSRLSQIRSTSYPHFQKAI
Sbjct: 48 QRAIDHSLESAIEASKSRLSQIRSTSYPHFQKAI 81

[Close]

BLAST of Cucsat.G21565 vs. ExPASy TrEMBL
Match: A0A1S3CAD0 (uncharacterized protein LOC103498769 OS=Cucumis melo OX=3656 GN=LOC103498769 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 8.14e-08
Identity = 30/34 (88.24%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 44 QTGYDHSLESTIEASKSRLSQIRSTSYPHFQKAI 77
          Q   DHSLES IEASKSRLSQIRSTSYPHFQKAI
Sbjct: 50 QRAIDHSLESAIEASKSRLSQIRSTSYPHFQKAI 83

[Close]

BLAST of Cucsat.G21565 vs. ExPASy TrEMBL
Match: A0A6J1L5I2 (uncharacterized protein LOC111499304 OS=Cucurbita maxima OX=3661 GN=LOC111499304 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.63e-07
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 44 QTGYDHSLESTIEASKSRLSQIRSTSYPHFQKAI 77
          Q   +HSLES +EASKSRLSQIRSTSYPHFQKAI
Sbjct: 50 QLAINHSLESAVEASKSRLSQIRSTSYPHFQKAI 83

[Close]

BLAST of Cucsat.G21565 vs. ExPASy TrEMBL
Match: A0A6J1H5U3 (uncharacterized protein LOC111460300 OS=Cucurbita moschata OX=3662 GN=LOC111460300 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.63e-07
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 44 QTGYDHSLESTIEASKSRLSQIRSTSYPHFQKAI 77
          Q   +HSLES +EASKSRLSQIRSTSYPHFQKAI
Sbjct: 50 QLAINHSLESAVEASKSRLSQIRSTSYPHFQKAI 83

[Close]

BLAST of Cucsat.G21565 vs. ExPASy TrEMBL
Match: A0A6J1DXH1 (uncharacterized protein LOC111024998 OS=Momordica charantia OX=3673 GN=LOC111024998 PE=4 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 8.53e-04
Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 0


Query: 48 DHSLESTIEASKSRLSQIRSTSYPHFQKAI 77
          D SLES I+ASKSRLSQIRSTS+PH QK I
Sbjct: 54 DDSLESAIQASKSRLSQIRSTSHPHLQKTI 83

The following BLAST results are available for this feature:

BLAST of Cucsat.G21565 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G21565 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK24760.1	1.66e-07	88.24	uncharacterized protein E5676_scaffold266G003230 [Cucumis melo var. makuwa]	[more]
XP_008459726.1	1.68e-07	88.24	PREDICTED: uncharacterized protein LOC103498769 [Cucumis melo]	[more]
KAG6575225.1	1.15e-06	82.35	RGS1-HXK1-interacting protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022959270.1	1.16e-06	82.35	uncharacterized protein LOC111460300 [Cucurbita moschata]	[more]
XP_023006638.1	1.16e-06	82.35	uncharacterized protein LOC111499304 [Cucurbita maxima]	[more]

BLAST of Cucsat.G21565 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DNB0	8.04e-08	88.24	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CAD0	8.14e-08	88.24	uncharacterized protein LOC103498769 OS=Cucumis melo OX=3656 GN=LOC103498769 PE=...	[more]
A0A6J1L5I2	5.63e-07	82.35	uncharacterized protein LOC111499304 OS=Cucurbita maxima OX=3661 GN=LOC111499304...	[more]
A0A6J1H5U3	5.63e-07	82.35	uncharacterized protein LOC111460300 OS=Cucurbita moschata OX=3662 GN=LOC1114603...	[more]
A0A6J1DXH1	8.53e-04	80.00	uncharacterized protein LOC111024998 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G21565.T1	Cucsat.G21565.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane