Cucsat.G21410 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G21410
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Pentatricopeptide repeat-containing protein
Location	ctg910: 2834214 .. 2838091 (+)
RNA-Seq Expression	Cucsat.G21410
Synteny	Cucsat.G21410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAATCAACAAACTTAAAAGTTGATAATCTTACGGGGTACCCTTACAAAATATCACTCTAGATTCCTGTTGGCTACTTTTGAGTAAAGGTTTTTGGATTACTTTTCTGTAAGAGCTTTTATAGCCATTTTTCAAAAGAGTGGAGAGTTATTTCCGTCTCTTCCAATTTCCTAAAAACAAAGAATCCGTTGATCGGTATGAGAAGTCTGAATTCCATTTTTTTAAGTTCAGGCGGGAAACGGTAAAATCCCACCAAGGTTACGCGCCGCCGCGCTCTGGCGGTTGAAACTCACCAACGAACAACCTAAGATACCCATTTCCCATCTGTACGATTGACCAAAAATCAGCCATTGAAATGATTCACCAAACGTTTAACAACGCAATTTCTCCCCTTCTACGCAAATGCAAGTCCGTCCAGCATCTCAAACAAATTCATGCTCACCTCCTCATGACCTACCTTCCACAAAGTCCATACGCCATTGCACCTTTACTCGAAGTCGCTGCAACTTCCGGCTGTGATCGCGATTCTTTCTTCTCTTACGCTTGTGGAATTTTCAAGAACCTGCAGCAGAGGAACATTTTCATGTATAATTCAATGATCAGAGGGTATTTTCTATCGCGTTTTCCGAAACAAGCGATTTTGTGTTACTTAGATTTGATGGATCGTGGATTTCTTGCCAATAAATATACTTTCCCGCCATTGATAAAGGCTTGCGCGTTAGTTTATCGTGAGCTGAAGCGAATAGGTTATTTGGTTCATGCCCATGTTATTGTACTTGGATATGAGAATGATGCTTTTGTCGTTAGTGCTCTTGTTGAATTTTATTCCTTGTTTGATTTGAAAGTTGCACGCGTATTGTTTGACAAAAGTTCTGGGAAGGATGTAGTTGTGTGGACGGTGATGGTTGATGGGTATGGAAAGGTTGGGGATATTGAGAGTGCTAGAGTGTTGTTTGATGAAATGCCCGAGAGGAATGTAATTTCTTGGAGTGCTATGATGGCTGCTTATTCTCGGGTTAGTGACTTCAGAGAGGTGCTTTGTTTGTTTAGACAAATGCAAAAAAAGAATATTGTGCCTAATGATTCAGTTATTGTTAGTGTTCTTACTGCTTGTGCACATCTTGGTGCTATAACACAAGGACTTTGGATGCACTCTTATGCCAAGCGCTACGGTTTGGACTCAAACCCAATATTGGCTACTGCATTGGTTGACATGTATTCAAAATGTGGTTACATCGAATCAGCTTTAGAAGTTTTTGAGGGCATTTCAAACAAAGATGCTGGGGCTTGGAATGCAATGATTTCTGGTTTTGCAATGACTGGGAATGTGGTGAAATCACTTGAGTTATTTGATAAAATGATTGCCAGTGGAACTCAGGCTACAGAAGCTACATTTGTCTCTATCCTTGCTGCTTGTACACACGCCAAGATGGTTGAGAGAGGCCTTGAATTCTTTGACCAAATGTATCCTGTTTACAGGGTTCAACCTCAATTCGAGCATTATGCTTGTGTGGTTGATCTTATGGCTAGAGCAGGTATGGTAGAGGATGCTGAGAAATTCGTGGAGGAAAAAATGGGAGGCTTTAGTAATGTGGATGCCAATGTGTGGGGAGCAATACTGAGTGCTTGTAGACAATATAGGAATATTGAAATTGGGGACAGAATTTGGACAAAACTTTCAGCCTTGGGTTTATTAGACGGTGGTACCCAAGTTCTTTCATACAACATCTTTTCTGAAGCTGGAAGGGAAATGGCGGCAAAGGAGGTAAGAAAAAAATTCTCAGAAGCTAGATCGAAAAAAATACCAGGTTGCAGCGTGATAGTGGTTGATGGCGCAGTTCAAGAGTTTCTTGCGGGCGATCTCTCTCATCCACAAGTGCAACATATATGTGAAATGCTTGGTTTTCTTTCTAAAATGGTGAAGTGGGAAACGGTCAAGTAATTTAGAAATGGTTTTCTGTTTGAGGATCTACATTCAAAATATCGAGGGACATCATGAGGCCTATATCTAGACACTGAGTTTAAAAACTAAGATTTTATCCCAAAATAGTGAATCCAAAAAAATCACTACATTTGAGGATCTAACTTTGAAAAAAAATAAAAATATCTCACAATGTTTATAAAATTGATGAAATACTTCTCTCATTGTCAATTTGGTTTGAGTTGAAACCAACGTCATCTAATATTTTCAAATAGGAGAAATCATTCTTTTAGAATCTGTGCATTTCATTTGGTTTTATCATTTTTCTGTAAATTCAGAGGCTGCGTGTTATCTCTCAACAAAGTTCACATAATTCCAAGTGTGCCATTGTTTGGTAAAAAGAATACCTTCAAATTTTTAAGTAGTTAATTTATTTTATTTTTCTGAAAGCATAACAAAATTTGTTTCCTTACAGTGAAATTGGTTGTGATGATCGAGATGGAAAAAGCACAAATTCATGGCGAACGTGAATATAACTCAATGCTTGAAACATTTACATCTTCCTTGAGGTAGATGGTTGAAATTCTCACTCTCAGATTTGTTGTACTAAGAAAAGAAAGCACAAAATCAAAGTAATCTTGCCAAGGTTTGATGAGGTAGGGATGGAGGATATTGATGAGCAAAAGTTTCTCGCAGGTTAATTACTATTTACATTTCATTGTTATATATCAAATAATATGATACAGAATCTTGTGATTCATTTCTTTCACATTCTTTTATCCGTAGATCATCTATACTTTGAGGGTATTCTGGTGTCCTCCATTTGCAAAAGCCATTGAGTAACAATCGCATCTTCTCCAAATCATCTCCATGGTAAATCTATACCTATGATAATCACATGTTCAGCTGCACTACTTTTCTATGAAATAATTGAAAGTTCTGACTTTGAATTCTTCTTCGTCACACTTGGCTACCATTTTATTTATTTTCTGGTACATTATCTGCTAATTTTTTTTTAATATATCCACGACCATTGAGTTCATCTTGTATACCTTGAGTAATCTCACGAGACAACCCACCAACTATTATAATTTTGGATGACAAGTAAATTCATAGTCGTAGGATATTAAATTTTAGGTAGATGGCCTTTATCGATTTTACCCGTTCTCTCTAAACCCCTTATCACATTACAATCAACAAGCACCACCTGTCTTTCGGCATGGAAAATAAAACAGTGCTTCATTGATTGAAGTCAATGGTATGGCCATATATGGGGCATGAGTGAACAATTCCACATGATTTGTGGAGCTAGCACTAGGAACAATCTCAAATATCTATCATTCTTCACACATGAAAAGCAGATTCATTATTACATGAATTCTTACCCTTCCCTACTTTTAACAGGTGGTAGACCAACACTCTGGCATCTCTCTCTATATATATTAGCGTATGTTCGGCATATCTTTTAAAATATTTTGGTCAACCATACCATAAGTGTGTTCTTAAGGGGAAAAAAAGTAATATTTGGCTAAAAACTTGAAGAATGGCAGTTTTTAAAATCCCGGTGCCAAAATACTTTTAGAGGAAACATTTAACTAAAACGTGTTTTTTTCTCATGACTTGAACAAGATTTGTTTTAATAAGGTGTACAACTGTGTTCTTGAGTTCTAAATTCAAAACATTTTCTTTCTCAGAAGGCATATAAAACGCACACTTAATTGCGGCTCATGGCTATGGGGAAATTAGAAGCTGCTCTTTGGTGTCTGCAAAATCAATGGAAGACAAAATCATAGGTTGGTGGAGCCAATCTTGCAGGTGACCCCAGTCCCCAACATGGTAAGAAAATTGAGAGTGACTGATACAACCTAGCACCATTCATATAAATCGGTATCTAAGTATTAAAATCTAGGTGAATATTAAGTACGTCGAGGTGTCTATAAATTGGTCCCGTGCCCATGACTATGAAGATAAGATCTTAGAGTACTTGGGACCAGTTTGGCTACTCAACATATATTATTGTATCATAGAGCAATGGGCTTCCTCCATGTGATCAAGATATAAGGATGTGTCATTGTCACTTGGTTAGTTCAAGGTTATTTGTGATTTATGCTTTGATGTGAACCACTTTGAAAACACACTCCAAAGTGTTTATTCTAAAACCACATCTAATTTTTTTTA

Coding sequence (CDS)

ATGATTCACCAAACGTTTAACAACGCAATTTCTCCCCTTCTACGCAAATGCAAGTCCGTCCAGCATCTCAAACAAATTCATGCTCACCTCCTCATGACCTACCTTCCACAAAGTCCATACGCCATTGCACCTTTACTCGAAGTCGCTGCAACTTCCGGCTGTGATCGCGATTCTTTCTTCTCTTACGCTTGTGGAATTTTCAAGAACCTGCAGCAGAGGAACATTTTCATGTATAATTCAATGATCAGAGGGTATTTTCTATCGCGTTTTCCGAAACAAGCGATTTTGTGTTACTTAGATTTGATGGATCGTGGATTTCTTGCCAATAAATATACTTTCCCGCCATTGATAAAGGCTTGCGCGTTAGTTTATCGTGAGCTGAAGCGAATAGGTTATTTGGTTCATGCCCATGTTATTGTACTTGGATATGAGAATGATGCTTTTGTCGTTAGTGCTCTTGTTGAATTTTATTCCTTGTTTGATTTGAAAGTTGCACGCGTATTGTTTGACAAAAGTTCTGGGAAGGATGTAGTTGTGTGGACGGTGATGGTTGATGGGTATGGAAAGGTTGGGGATATTGAGAGTGCTAGAGTGTTGTTTGATGAAATGCCCGAGAGGAATGTAATTTCTTGGAGTGCTATGATGGCTGCTTATTCTCGGGTTAGTGACTTCAGAGAGGTGCTTTGTTTGTTTAGACAAATGCAAAAAAAGAATATTGTGCCTAATGATTCAGTTATTGTTAGTGTTCTTACTGCTTGTGCACATCTTGGTGCTATAACACAAGGACTTTGGATGCACTCTTATGCCAAGCGCTACGGTTTGGACTCAAACCCAATATTGGCTACTGCATTGGTTGACATGTATTCAAAATGTGGTTACATCGAATCAGCTTTAGAAGTTTTTGAGGGCATTTCAAACAAAGATGCTGGGGCTTGGAATGCAATGATTTCTGGTTTTGCAATGACTGGGAATGTGGTGAAATCACTTGAGTTATTTGATAAAATGATTGCCAGTGGAACTCAGGCTACAGAAGCTACATTTGTCTCTATCCTTGCTGCTTGTACACACGCCAAGATGGTTGAGAGAGGCCTTGAATTCTTTGACCAAATGTATCCTGTTTACAGGGTTCAACCTCAATTCGAGCATTATGCTTGTGTGGTTGATCTTATGGCTAGAGCAGGTATGGTAGAGGATGCTGAGAAATTCGTGGAGGAAAAAATGGGAGGCTTTAGTAATGTGGATGCCAATGTGTGGGGAGCAATACTGAGTGCTTGTAGACAATATAGGAATATTGAAATTGGGGACAGAATTTGGACAAAACTTTCAGCCTTGGGTTTATTAGACGGTGGTACCCAAGTTCTTTCATACAACATCTTTTCTGAAGCTGGAAGGGAAATGGCGGCAAAGGAGGTAAGAAAAAAATTCTCAGAAGCTAGATCGAAAAAAATACCAGGTTGCAGCGTGATAGTGGTTGATGGCGCAGTTCAAGAGTTTCTTGCGGGCGATCTCTCTCATCCACAAGTGCAACATATATGTGAAATGCTTGGTTTTCTTTCTAAAATGGTGAAGTGGGAAACGGTCAAGTAA

Protein sequence

MIHQTFNNAISPLLRKCKSVQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKACALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVWTVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKKIPGCSVIVVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVKWETVK

Homology

[Close]

BLAST of Cucsat.G21410 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 8.0e-85
Identity = 168/448 (37.50%), Postives = 262/448 (58.48%), Query Frame = 0


Query: 14  LRKCKSVQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKNLQQR 73
           L++C   + LKQIHA +L T L Q  YAI   L    +S      F  YA  +F    + 
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISS--TSSDFLPYAQIVFDGFDRP 80

Query: 74  NIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKACA--LVYRELKRIG 133
           + F++N MIRG+  S  P++++L Y  ++      N YTFP L+KAC+    + E  +I 
Sbjct: 81  DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI- 140

Query: 134 YLVHAHVIVLGYENDAFVVSALVEFYSLF-DLKVARVLFDKSSGKDVVVWTVMVDGYGKV 193
              HA +  LGYEND + V++L+  Y++  + K+A +LFD+    D V W  ++ GY K 
Sbjct: 141 ---HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKA 200

Query: 194 GDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIVSVL 253
           G ++ A  LF +M E+N ISW+ M++ Y +    +E L LF +MQ  ++ P++  + + L
Sbjct: 201 GKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANAL 260

Query: 254 TACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDAG 313
           +ACA LGA+ QG W+HSY  +  +  + +L   L+DMY+KCG +E ALEVF+ I  K   
Sbjct: 261 SACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ 320

Query: 314 AWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFFDQM 373
           AW A+ISG+A  G+  +++  F +M   G +    TF ++L AC++  +VE G   F  M
Sbjct: 321 AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM 380

Query: 374 YPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSACRQYRN 433
              Y ++P  EHY C+VDL+ RAG++++A++F++E        +A +WGA+L ACR ++N
Sbjct: 381 ERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMP---LKPNAVIWGALLKACRIHKN 440

Query: 434 IEIGDRIWTKLSALGLLDGGTQVLSYNI 459
           IE+G+ I   L A+    GG  V   NI
Sbjct: 441 IELGEEIGEILIAIDPYHGGRYVHKANI 459

[Close]

BLAST of Cucsat.G21410 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.1e-81
Identity = 168/474 (35.44%), Postives = 279/474 (58.86%), Query Frame = 0


Query: 8   NAISPLLRKCKSVQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFFSYACGIF 67
           +++ P +  C++++ L QIHA  + +   +   A A +L   ATS         YA  IF
Sbjct: 24  SSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRD-LDYAHKIF 83

Query: 68  KNLQQRNIFMYNSMIRGYFLSRFPKQ--AILCYLDLMDRGFL-ANKYTFPPLIKACALVY 127
             + QRN F +N++IRG+  S   K   AI  + ++M   F+  N++TFP ++KACA   
Sbjct: 84  NQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTG 143

Query: 128 RELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFD-LKVARVLFDKS----------- 187
           +  +  G  +H   +  G+  D FV+S LV  Y +   +K ARVLF K+           
Sbjct: 144 KIQE--GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTD 203

Query: 188 ---SGKDVVVWTVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLC 247
                 ++V+W VM+DGY ++GD ++AR+LFD+M +R+V+SW+ M++ YS    F++ + 
Sbjct: 204 RRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVE 263

Query: 248 LFRQMQKKNIVPNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYS 307
           +FR+M+K +I PN   +VSVL A + LG++  G W+H YA+  G+  + +L +AL+DMYS
Sbjct: 264 VFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYS 323

Query: 308 KCGYIESALEVFEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVS 367
           KCG IE A+ VFE +  ++   W+AMI+GFA+ G    +++ F KM  +G + ++  +++
Sbjct: 324 KCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYIN 383

Query: 368 ILAACTHAKMVERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGG 427
           +L AC+H  +VE G  +F QM  V  ++P+ EHY C+VDL+ R+G++++AE+F+   +  
Sbjct: 384 LLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI---LNM 443

Query: 428 FSNVDANVWGAILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAG 464
               D  +W A+L ACR   N+E+G R+   L  +   D G  V   N+++  G
Sbjct: 444 PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQG 491

[Close]

BLAST of Cucsat.G21410 vs. ExPASy Swiss-Prot
Match: Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 7.0e-81
Identity = 166/460 (36.09%), Postives = 270/460 (58.70%), Query Frame = 0


Query: 13  LLRKCKSVQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFFS-------YACG 72
           LL+ C S   LK IH  LL T+L    +  + LL +     C  DS F+       YA G
Sbjct: 18  LLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLAL-----CVDDSTFNKPTNLLGYAYG 77

Query: 73  IFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKACALVYR 132
           IF  +Q  N+F++N +IR +     P +A   Y  ++      +  TFP LIKA + +  
Sbjct: 78  IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEM-- 137

Query: 133 ELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFD-LKVARVLFDKSSGKDVVVWTVMV 192
           E   +G   H+ ++  G++ND +V ++LV  Y+    +  A  +F +   +DVV WT MV
Sbjct: 138 ECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMV 197

Query: 193 DGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDS 252
            GY K G +E+AR +FDEMP RN+ +WS M+  Y++ + F + + LF  M+++ +V N++
Sbjct: 198 AGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANET 257

Query: 253 VIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGI 312
           V+VSV+++CAHLGA+  G   + Y  +  +  N IL TALVDM+ +CG IE A+ VFEG+
Sbjct: 258 VMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL 317

Query: 313 SNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGL 372
              D+ +W+++I G A+ G+  K++  F +MI+ G    + TF ++L+AC+H  +VE+GL
Sbjct: 318 PETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGL 377

Query: 373 EFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSA 432
           E ++ M   + ++P+ EHY C+VD++ RAG + +AE F+   +      +A + GA+L A
Sbjct: 378 EIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFI---LKMHVKPNAPILGALLGA 437

Query: 433 CRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGR 465
           C+ Y+N E+ +R+   L  +     G  VL  NI++ AG+
Sbjct: 438 CKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQ 467

[Close]

BLAST of Cucsat.G21410 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.8e-76
Identity = 174/562 (30.96%), Postives = 277/562 (49.29%), Query Frame = 0


Query: 7   NNAISPLLRKCKSVQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFFSYACGI 66
           N+    LL  CK++Q L+ IHA ++   L  + YA++ L+E    S         YA  +
Sbjct: 33  NHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILS--PHFEGLPYAISV 92

Query: 67  FKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKACALVYRE 126
           FK +Q+ N+ ++N+M RG+ LS  P  A+  Y+ ++  G L N YTFP ++K+CA    +
Sbjct: 93  FKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCA--KSK 152

Query: 127 LKRIGYLVHAHVIVLGYENDAFVVSALVEFY-SLFDLKVARVLFDKSSGKDVVVWTVMVD 186
             + G  +H HV+ LG + D +V ++L+  Y     L+ A  +FDKS  +DVV +T ++ 
Sbjct: 153 AFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIK 212

Query: 187 GYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNI------ 246
           GY   G IE+A+ LFDE+P ++V+SW+AM++ Y+   +++E L LF+ M K N+      
Sbjct: 213 GYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST 272

Query: 247 ------------------------------------------------------------ 306
                                                                       
Sbjct: 273 MVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP 332

Query: 307 -----------------------------------VPNDSVIVSVLTACAHLGAITQGLW 366
                                               PND  ++S+L ACAHLGAI  G W
Sbjct: 333 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 392

Query: 367 MHSYAKR--YGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDAGAWNAMISGFAMT 426
           +H Y  +   G+ +   L T+L+DMY+KCG IE+A +VF  I +K   +WNAMI GFAM 
Sbjct: 393 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMH 452

Query: 427 GNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFFDQMYPVYRVQPQFEH 465
           G    S +LF +M   G Q  + TFV +L+AC+H+ M++ G   F  M   Y++ P+ EH
Sbjct: 453 GRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEH 512

[Close]

BLAST of Cucsat.G21410 vs. ExPASy Swiss-Prot
Match: Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.0e-75
Identity = 151/459 (32.90%), Postives = 260/459 (56.64%), Query Frame = 0


Query: 8   NAISPLLRKCKSVQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFFSYACGIF 67
           N   P L++ KS    K+I+A +++  L QS + +  +++      CD+     YA  +F
Sbjct: 11  NYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDF-----CDKIEDMDYATRLF 70

Query: 68  KNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGF-LANKYTFPPLIKACALVYRE 127
             +   N+F+YNS+IR Y  +      I  Y  L+ + F L +++TFP + K+CA +   
Sbjct: 71  NQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASL--G 130

Query: 128 LKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLF-DLKVARVLFDKSSGKDVVVWTVMVD 187
              +G  VH H+   G        +AL++ Y  F DL  A  +FD+   +DV+ W  ++ 
Sbjct: 131 SCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLS 190

Query: 188 GYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSV 247
           GY ++G ++ A+ LF  M ++ ++SW+AM++ Y+ +  + E +  FR+MQ   I P++  
Sbjct: 191 GYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEIS 250

Query: 248 IVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGIS 307
           ++SVL +CA LG++  G W+H YA+R G      +  AL++MYSKCG I  A+++F  + 
Sbjct: 251 LISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME 310

Query: 308 NKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLE 367
            KD  +W+ MISG+A  GN   ++E F++M  +  +    TF+ +L+AC+H  M + GL 
Sbjct: 311 GKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLR 370

Query: 368 FFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSAC 427
           +FD M   Y+++P+ EHY C++D++ARAG +E A +  +         D+ +WG++LS+C
Sbjct: 371 YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMP---MKPDSKIWGSLLSSC 430

Query: 428 RQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGR 465
           R   N+++       L  L   D G  VL  NI+++ G+
Sbjct: 431 RTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGK 459

[Close]

BLAST of Cucsat.G21410 vs. NCBI nr
Match: XP_004152427.2 (pentatricopeptide repeat-containing protein At5g66520 isoform X2 [Cucumis sativus])

HSP 1 Score: 930 bits (2403), Expect = 0.0
Identity = 467/470 (99.36%), Postives = 467/470 (99.36%), Query Frame = 0


Query: 1   MIHQTFNNAISPLLRKCKSVQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFF 60
           MIHQTFNNAISPLLRKCKSVQHLKQIHAHLL TYL QSPYAIAPLLEVAATSGCDRDSFF
Sbjct: 1   MIHQTFNNAISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFF 60

Query: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120
           SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC
Sbjct: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120

Query: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180
           ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW
Sbjct: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180

Query: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240
           TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV
Sbjct: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240

Query: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300
           PNDSVI SVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV
Sbjct: 241 PNDSVIASVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300

Query: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360
           FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV
Sbjct: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360

Query: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420
           ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA
Sbjct: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420

Query: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE 470
           ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE
Sbjct: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE 470

[Close]

BLAST of Cucsat.G21410 vs. NCBI nr
Match: XP_031740937.1 (pentatricopeptide repeat-containing protein At5g66520 isoform X1 [Cucumis sativus] >XP_031740938.1 pentatricopeptide repeat-containing protein At5g66520 isoform X1 [Cucumis sativus] >XP_031740939.1 pentatricopeptide repeat-containing protein At5g66520 isoform X1 [Cucumis sativus] >XP_031740940.1 pentatricopeptide repeat-containing protein At5g66520 isoform X1 [Cucumis sativus] >XP_031740941.1 pentatricopeptide repeat-containing protein At5g66520 isoform X1 [Cucumis sativus])

HSP 1 Score: 930 bits (2403), Expect = 0.0
Identity = 467/470 (99.36%), Postives = 467/470 (99.36%), Query Frame = 0


Query: 1   MIHQTFNNAISPLLRKCKSVQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFF 60
           MIHQTFNNAISPLLRKCKSVQHLKQIHAHLL TYL QSPYAIAPLLEVAATSGCDRDSFF
Sbjct: 1   MIHQTFNNAISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFF 60

Query: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120
           SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC
Sbjct: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120

Query: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180
           ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW
Sbjct: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180

Query: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240
           TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV
Sbjct: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240

Query: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300
           PNDSVI SVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV
Sbjct: 241 PNDSVIASVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300

Query: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360
           FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV
Sbjct: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360

Query: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420
           ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA
Sbjct: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420

Query: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE 470
           ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE
Sbjct: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE 470

[Close]

BLAST of Cucsat.G21410 vs. NCBI nr
Match: XP_008437069.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like isoform X2 [Cucumis melo])

HSP 1 Score: 898 bits (2320), Expect = 0.0
Identity = 449/470 (95.53%), Postives = 461/470 (98.09%), Query Frame = 0


Query: 1   MIHQTFNNAISPLLRKCKSVQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFF 60
           MIHQTFN+AISPLLRKCKSVQHLKQIHAHLL TYLPQ+PYAI+PLLEVAATSGCD DSFF
Sbjct: 1   MIHQTFNDAISPLLRKCKSVQHLKQIHAHLLKTYLPQNPYAISPLLEVAATSGCDGDSFF 60

Query: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120
           SYAC IFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDL+D GFLANKYTFPPLIKAC
Sbjct: 61  SYACRIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLIDHGFLANKYTFPPLIKAC 120

Query: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180
           ALVYRELKRIGYLVHAHV+VLGYENDAFVVSALVEFYSLFDLKVARVLFDKSS KDVVVW
Sbjct: 121 ALVYRELKRIGYLVHAHVVVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSAKDVVVW 180

Query: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240
           TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFR+MQKK+I 
Sbjct: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFREMQKKDIK 240

Query: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300
           PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLD+NPILATALVDMYSKCGYIESALEV
Sbjct: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDANPILATALVDMYSKCGYIESALEV 300

Query: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360
           FEGISNKDAGAWNAMISG AMTG+V+KSLELFDKMIASGTQATEATFVSILAACTHAKMV
Sbjct: 301 FEGISNKDAGAWNAMISGVAMTGDVMKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360

Query: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420
           ERGLE FDQMYPVY VQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA
Sbjct: 361 ERGLELFDQMYPVYWVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420

Query: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE 470
           ILSACR+YRNIEIGDRIWTKLSALG+LDGGTQVLSYNIFSEAGREMAAKE
Sbjct: 421 ILSACRKYRNIEIGDRIWTKLSALGVLDGGTQVLSYNIFSEAGREMAAKE 470

[Close]

BLAST of Cucsat.G21410 vs. NCBI nr
Match: XP_008437067.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like isoform X1 [Cucumis melo])

HSP 1 Score: 898 bits (2320), Expect = 0.0
Identity = 449/470 (95.53%), Postives = 461/470 (98.09%), Query Frame = 0


Query: 1   MIHQTFNNAISPLLRKCKSVQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFF 60
           MIHQTFN+AISPLLRKCKSVQHLKQIHAHLL TYLPQ+PYAI+PLLEVAATSGCD DSFF
Sbjct: 1   MIHQTFNDAISPLLRKCKSVQHLKQIHAHLLKTYLPQNPYAISPLLEVAATSGCDGDSFF 60

Query: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120
           SYAC IFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDL+D GFLANKYTFPPLIKAC
Sbjct: 61  SYACRIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLIDHGFLANKYTFPPLIKAC 120

Query: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180
           ALVYRELKRIGYLVHAHV+VLGYENDAFVVSALVEFYSLFDLKVARVLFDKSS KDVVVW
Sbjct: 121 ALVYRELKRIGYLVHAHVVVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSAKDVVVW 180

Query: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240
           TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFR+MQKK+I 
Sbjct: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFREMQKKDIK 240

Query: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300
           PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLD+NPILATALVDMYSKCGYIESALEV
Sbjct: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDANPILATALVDMYSKCGYIESALEV 300

Query: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360
           FEGISNKDAGAWNAMISG AMTG+V+KSLELFDKMIASGTQATEATFVSILAACTHAKMV
Sbjct: 301 FEGISNKDAGAWNAMISGVAMTGDVMKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360

Query: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420
           ERGLE FDQMYPVY VQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA
Sbjct: 361 ERGLELFDQMYPVYWVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420

Query: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE 470
           ILSACR+YRNIEIGDRIWTKLSALG+LDGGTQVLSYNIFSEAGREMAAKE
Sbjct: 421 ILSACRKYRNIEIGDRIWTKLSALGVLDGGTQVLSYNIFSEAGREMAAKE 470

[Close]

BLAST of Cucsat.G21410 vs. NCBI nr
Match: KAA0039723.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 896 bits (2316), Expect = 0.0
Identity = 448/470 (95.32%), Postives = 460/470 (97.87%), Query Frame = 0


Query: 1   MIHQTFNNAISPLLRKCKSVQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFF 60
           MIHQTFN+AISPLLRKCKSVQHLKQIHAHLL TYLPQ+PYAI+PLLEVAATSGCD DSFF
Sbjct: 1   MIHQTFNDAISPLLRKCKSVQHLKQIHAHLLKTYLPQNPYAISPLLEVAATSGCDGDSFF 60

Query: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120
           SYAC IFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDL+D GF ANKYTFPPLIKAC
Sbjct: 61  SYACRIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLIDHGFFANKYTFPPLIKAC 120

Query: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180
           ALVYRELKRIGYLVHAHV+VLGYENDAFVVSALVEFYSLFDLKVARVLFDKSS KDVVVW
Sbjct: 121 ALVYRELKRIGYLVHAHVVVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSAKDVVVW 180

Query: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240
           TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFR+MQKK+I 
Sbjct: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFREMQKKDIK 240

Query: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300
           PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLD+NPILATALVDMYSKCGYIESALEV
Sbjct: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDANPILATALVDMYSKCGYIESALEV 300

Query: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360
           FEGISNKDAGAWNAMISG AMTG+V+KSLELFDKMIASGTQATEATFVSILAACTHAKMV
Sbjct: 301 FEGISNKDAGAWNAMISGVAMTGDVMKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360

Query: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420
           ERGLE FDQMYPVY VQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA
Sbjct: 361 ERGLELFDQMYPVYWVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420

Query: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE 470
           ILSACR+YRNIEIGDRIWTKLSALG+LDGGTQVLSYNIFSEAGREMAAKE
Sbjct: 421 ILSACRKYRNIEIGDRIWTKLSALGVLDGGTQVLSYNIFSEAGREMAAKE 470

[Close]

BLAST of Cucsat.G21410 vs. ExPASy TrEMBL
Match: A0A0A0KMY1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162080 PE=4 SV=1)

HSP 1 Score: 930 bits (2403), Expect = 0.0
Identity = 467/470 (99.36%), Postives = 467/470 (99.36%), Query Frame = 0


Query: 1   MIHQTFNNAISPLLRKCKSVQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFF 60
           MIHQTFNNAISPLLRKCKSVQHLKQIHAHLL TYL QSPYAIAPLLEVAATSGCDRDSFF
Sbjct: 1   MIHQTFNNAISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFF 60

Query: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120
           SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC
Sbjct: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120

Query: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180
           ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW
Sbjct: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180

Query: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240
           TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV
Sbjct: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240

Query: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300
           PNDSVI SVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV
Sbjct: 241 PNDSVIASVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300

Query: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360
           FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV
Sbjct: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360

Query: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420
           ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA
Sbjct: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420

Query: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE 470
           ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE
Sbjct: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE 470

[Close]

BLAST of Cucsat.G21410 vs. ExPASy TrEMBL
Match: A0A1S3ATN3 (pentatricopeptide repeat-containing protein At5g66520-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482605 PE=4 SV=1)

HSP 1 Score: 898 bits (2320), Expect = 0.0
Identity = 449/470 (95.53%), Postives = 461/470 (98.09%), Query Frame = 0


Query: 1   MIHQTFNNAISPLLRKCKSVQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFF 60
           MIHQTFN+AISPLLRKCKSVQHLKQIHAHLL TYLPQ+PYAI+PLLEVAATSGCD DSFF
Sbjct: 1   MIHQTFNDAISPLLRKCKSVQHLKQIHAHLLKTYLPQNPYAISPLLEVAATSGCDGDSFF 60

Query: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120
           SYAC IFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDL+D GFLANKYTFPPLIKAC
Sbjct: 61  SYACRIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLIDHGFLANKYTFPPLIKAC 120

Query: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180
           ALVYRELKRIGYLVHAHV+VLGYENDAFVVSALVEFYSLFDLKVARVLFDKSS KDVVVW
Sbjct: 121 ALVYRELKRIGYLVHAHVVVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSAKDVVVW 180

Query: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240
           TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFR+MQKK+I 
Sbjct: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFREMQKKDIK 240

Query: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300
           PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLD+NPILATALVDMYSKCGYIESALEV
Sbjct: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDANPILATALVDMYSKCGYIESALEV 300

Query: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360
           FEGISNKDAGAWNAMISG AMTG+V+KSLELFDKMIASGTQATEATFVSILAACTHAKMV
Sbjct: 301 FEGISNKDAGAWNAMISGVAMTGDVMKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360

Query: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420
           ERGLE FDQMYPVY VQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA
Sbjct: 361 ERGLELFDQMYPVYWVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420

Query: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE 470
           ILSACR+YRNIEIGDRIWTKLSALG+LDGGTQVLSYNIFSEAGREMAAKE
Sbjct: 421 ILSACRKYRNIEIGDRIWTKLSALGVLDGGTQVLSYNIFSEAGREMAAKE 470

[Close]

BLAST of Cucsat.G21410 vs. ExPASy TrEMBL
Match: A0A1S3ASS3 (pentatricopeptide repeat-containing protein At5g66520-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482605 PE=4 SV=1)

HSP 1 Score: 898 bits (2320), Expect = 0.0
Identity = 449/470 (95.53%), Postives = 461/470 (98.09%), Query Frame = 0


Query: 1   MIHQTFNNAISPLLRKCKSVQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFF 60
           MIHQTFN+AISPLLRKCKSVQHLKQIHAHLL TYLPQ+PYAI+PLLEVAATSGCD DSFF
Sbjct: 1   MIHQTFNDAISPLLRKCKSVQHLKQIHAHLLKTYLPQNPYAISPLLEVAATSGCDGDSFF 60

Query: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120
           SYAC IFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDL+D GFLANKYTFPPLIKAC
Sbjct: 61  SYACRIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLIDHGFLANKYTFPPLIKAC 120

Query: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180
           ALVYRELKRIGYLVHAHV+VLGYENDAFVVSALVEFYSLFDLKVARVLFDKSS KDVVVW
Sbjct: 121 ALVYRELKRIGYLVHAHVVVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSAKDVVVW 180

Query: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240
           TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFR+MQKK+I 
Sbjct: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFREMQKKDIK 240

Query: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300
           PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLD+NPILATALVDMYSKCGYIESALEV
Sbjct: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDANPILATALVDMYSKCGYIESALEV 300

Query: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360
           FEGISNKDAGAWNAMISG AMTG+V+KSLELFDKMIASGTQATEATFVSILAACTHAKMV
Sbjct: 301 FEGISNKDAGAWNAMISGVAMTGDVMKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360

Query: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420
           ERGLE FDQMYPVY VQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA
Sbjct: 361 ERGLELFDQMYPVYWVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420

Query: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE 470
           ILSACR+YRNIEIGDRIWTKLSALG+LDGGTQVLSYNIFSEAGREMAAKE
Sbjct: 421 ILSACRKYRNIEIGDRIWTKLSALGVLDGGTQVLSYNIFSEAGREMAAKE 470

[Close]

BLAST of Cucsat.G21410 vs. ExPASy TrEMBL
Match: A0A5A7T9N4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00550 PE=4 SV=1)

HSP 1 Score: 896 bits (2316), Expect = 0.0
Identity = 448/470 (95.32%), Postives = 460/470 (97.87%), Query Frame = 0


Query: 1   MIHQTFNNAISPLLRKCKSVQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFF 60
           MIHQTFN+AISPLLRKCKSVQHLKQIHAHLL TYLPQ+PYAI+PLLEVAATSGCD DSFF
Sbjct: 1   MIHQTFNDAISPLLRKCKSVQHLKQIHAHLLKTYLPQNPYAISPLLEVAATSGCDGDSFF 60

Query: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120
           SYAC IFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDL+D GF ANKYTFPPLIKAC
Sbjct: 61  SYACRIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLIDHGFFANKYTFPPLIKAC 120

Query: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180
           ALVYRELKRIGYLVHAHV+VLGYENDAFVVSALVEFYSLFDLKVARVLFDKSS KDVVVW
Sbjct: 121 ALVYRELKRIGYLVHAHVVVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSAKDVVVW 180

Query: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240
           TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFR+MQKK+I 
Sbjct: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFREMQKKDIK 240

Query: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300
           PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLD+NPILATALVDMYSKCGYIESALEV
Sbjct: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDANPILATALVDMYSKCGYIESALEV 300

Query: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360
           FEGISNKDAGAWNAMISG AMTG+V+KSLELFDKMIASGTQATEATFVSILAACTHAKMV
Sbjct: 301 FEGISNKDAGAWNAMISGVAMTGDVMKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360

Query: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420
           ERGLE FDQMYPVY VQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA
Sbjct: 361 ERGLELFDQMYPVYWVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420

Query: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE 470
           ILSACR+YRNIEIGDRIWTKLSALG+LDGGTQVLSYNIFSEAGREMAAKE
Sbjct: 421 ILSACRKYRNIEIGDRIWTKLSALGVLDGGTQVLSYNIFSEAGREMAAKE 470

[Close]

BLAST of Cucsat.G21410 vs. ExPASy TrEMBL
Match: A0A6J1E2B1 (pentatricopeptide repeat-containing protein At5g66520-like OS=Cucurbita moschata OX=3662 GN=LOC111430180 PE=4 SV=1)

HSP 1 Score: 772 bits (1993), Expect = 5.74e-278
Identity = 381/470 (81.06%), Postives = 422/470 (89.79%), Query Frame = 0


Query: 1   MIHQTFNNAISPLLRKCKSVQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFF 60
           MIH++F +AI+PL+ K KS+QHLK+IH HLL T+LP+SPY +APLL VAATSG +  SFF
Sbjct: 1   MIHKSFKDAIAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFF 60

Query: 61  SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120
           SYAC IFKNL+ RN FMYNSMIRGY LSR PKQAILCYLDL+D+G  AN YTFPPLIKAC
Sbjct: 61  SYACAIFKNLRHRNTFMYNSMIRGYVLSRAPKQAILCYLDLIDQGLFANNYTFPPLIKAC 120

Query: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180
           ALVY ELKR+GYLVHAHVIVLGYEND FVVS LVEFYSL DLKVARVLFDKSS KDVVVW
Sbjct: 121 ALVYSELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLIDLKVARVLFDKSSVKDVVVW 180

Query: 181 TVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIV 240
           T MVDGYGKVGD+ESAR LFDEMP RNVISWSAM+AAYSRVSDFREVLCLFRQMQ+K+I 
Sbjct: 181 TAMVDGYGKVGDVESARELFDEMPVRNVISWSAMIAAYSRVSDFREVLCLFRQMQEKDIK 240

Query: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300
           PN+S+ VSVLTACAHLGAITQGLWMHSYAKR+  +SNPILATALVDMYSKCGYIESAL V
Sbjct: 241 PNESITVSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESALAV 300

Query: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360
           FEGI NKDAGAWNAMISG AM G+V KSLELFDKMI +GTQATE TFV++LAACTHAKMV
Sbjct: 301 FEGIPNKDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAKMV 360

Query: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420
           + GL+ FDQMY VY V+PQFEHYACVVDLMARAGMVEDAE+F+E+KMGGFSNVDANVWGA
Sbjct: 361 DTGLKIFDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVWGA 420

Query: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKE 470
           +L ACR+Y NIE+G+RIW KL A+G+ D GTQVLSYNI++EAG EMAAKE
Sbjct: 421 MLGACRKYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEMAAKE 470

The following BLAST results are available for this feature:

BLAST of Cucsat.G21410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJY7	8.0e-85	37.50	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]
Q9FI80	1.1e-81	35.44	Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX...	[more]
Q9FG16	7.0e-81	36.09	Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX...	[more]
Q9LN01	1.8e-76	30.96	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9SIL5	2.0e-75	32.90	Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX...	[more]

BLAST of Cucsat.G21410 vs. NCBI nr


Match Name	Identity	Description
XP_004152427.2	99.36	pentatricopeptide repeat-containing protein At5g66520 isoform X2 [Cucumis sativu...	[more]
XP_031740937.1	99.36	pentatricopeptide repeat-containing protein At5g66520 isoform X1 [Cucumis sativu...	[more]
XP_008437069.1	95.53	PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like isoform X2...	[more]
XP_008437067.1	95.53	PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like isoform X1...	[more]
KAA0039723.1	95.32	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G21410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMY1	0.0	99.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162080 PE=4 SV=1	[more]
A0A1S3ATN3	0.0	95.53	pentatricopeptide repeat-containing protein At5g66520-like isoform X1 OS=Cucumis...	[more]
A0A1S3ASS3	0.0	95.53	pentatricopeptide repeat-containing protein At5g66520-like isoform X2 OS=Cucumis...	[more]
A0A5A7T9N4	0.0	95.32	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1E2B1	5.74e-278	81.06	pentatricopeptide repeat-containing protein At5g66520-like OS=Cucurbita moschata...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 4..131 e-value: 4.0E-8 score: 34.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 132..271 e-value: 4.1E-24 score: 87.5 coord: 284..497 e-value: 4.6E-31 score: 110.3
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 312..340 e-value: 3.1E-6 score: 25.0 coord: 209..242 e-value: 4.0E-8 score: 31.0 coord: 178..208 e-value: 8.8E-7 score: 26.7 coord: 77..109 e-value: 0.0011 score: 17.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 206..254 e-value: 6.9E-8 score: 32.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 346..370 e-value: 0.74 score: 10.2 coord: 311..339 e-value: 1.5E-6 score: 28.0 coord: 282..302 e-value: 0.03 score: 14.6 coord: 76..106 e-value: 0.014 score: 15.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 176..206 score: 10.566751
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 207..241 score: 11.706726
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 308..342 score: 10.665402
None	No IPR available	PANTHER	PTHR47926	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 9..524
None	No IPR available	PANTHER	PTHR47926:SF162	SUBFAMILY NOT NAMED	coord: 9..524

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G21410.T1	Cucsat.G21410.T1	mRNA
Cucsat.G21410.T2	Cucsat.G21410.T2	mRNA
Cucsat.G21410.T6	Cucsat.G21410.T6	mRNA
Cucsat.G21410.T4	Cucsat.G21410.T4	mRNA
Cucsat.G21410.T3	Cucsat.G21410.T3	mRNA
Cucsat.G21410.T5	Cucsat.G21410.T5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding