Cucsat.G21365 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G21365
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	ribosomal L1 domain-containing protein 1-like
Location	ctg910: 1834491 .. 1836702 (+)
RNA-Seq Expression	Cucsat.G21365
Synteny	Cucsat.G21365

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACCCTAAAATCTCTAAAATCTCTCTATGGCTTTGGCGGACGTTACTCCTACGACCAAAGTTCGTCGGGAAACGGCGGCGAAAGCCGTGGAATCTCTTCTTCAATGGCGGAATTCCAAACGGGAGAAGCCCCAACTCTTCGACCAAGAAGATTTTCTATACCTCATCGTAACCCTGAAGAAGATCCCTCCCAAAGGTCGCACAAATCCTTACAAAATCCCTCTTCCACATTCCCTTCACTCCGACTCTTCCGAACTTTGTCTCATTATCGACGATAGAACCAAGTCCAATCTCACCAAGGATGATGCCCGGAAGAAAATACAGTCTGAAAACATCCCAATTTCGAAGGTAATCAAGTTGTCAAAGCTTAAATCCGATTACCGCCCCTTTGAAGCTAAACGGAAGCTCTGTGATTCGTACGATATGTTTTTCGCTGATGATAGAGTTATTCCGCTGTTGCCGAGTCTGTTGGGGAAGCACTTTTACAAAAAGAAGAAGATTCCGGTGCCGTTGAATCTGAGGCATAAGAATTGGAAAGAACAGGTCGAGAGGAGCTGTTCGTCGGGATTGTTGTATTTGAGGACAGGGACTTGTAGTGTGGTGAAAGTGGCGAGGACTTCGATGGAAGTTGAAGAGATCGTGGACAATGTGATTGCGGCCATTGATGGGATTGCAGAGGTTGTGCCTAAAAAATGGAGTAATGTGCGGTCGTTTTTTTTAAAGGTCCTTGAATCTATTGCATTACCAATTTACCAAACAGTGCCGGAGTTGAAGTTTAAGATTGAGGCCGGCGTGAAGGGGAAAGAAGATGAAATAACAAAAGAAGAAGAAGCAGCAAAGAGTCCTACTCCCGTAAAAGTTGGCAGCAAAAAAAGAGAGAAAATTGAGCAAAAAGAAGGGTAGGATACATGAAATTCGCTACATGGACACTAATGGTCGAGAGTTGTCTAATGAAGATGAAGGCAGTGATCTTGATGATGTTGAGGTTAATGAGAATCTCAAAAAGGGTAGTGATGAATTGAAGAAGGGTAAAAAGAAGAAGGTAAAAAAGAGTGAGGTTTTCGAAGTCGAAAGCGGCTGGTGAAACAAAGGTCAAGGCAAAGAAGGTTAAAACAGCGAAATGATTGTTGGGAATTTAATGAAGCTTGAAGCTTTAAAGGTATTCTCTTCATTTCTATGCTTAAACATCCCACTTTTAAGTGGCAAGTTTTGTTTTGAGTATCTCTAATCATTTTCCATTTTTTAATCAGGTTTTGGAAAATGTACTGTTTCTGTTGTTCTTAGTTAAAGAAATTCTGCAAGATTGATGTTTGATCTGTGTTTAAATACTTCCATATCTTTACATTTAGTTTGAGTAATTATGCTTGCTTAGTAAGAGAACCTTTATATCAATCTCTATAGCTTCTCTTTCCAAACTGATGATGCAATACATAATGTGTGGTTGTACCTTTGTAGTAAATGATTCACTAGTTTTTGGAGGGCTTAATTACAAATTTGGTCCGTGTCTCTCTATGATTTGATAAAGTCTTGTAAAGCCTGCTGTTGAAGACAAACGTATGTGAGGATGTGAGGGTCAGCTATCCATATGCATGTTGTTAAAAGACATAATGAGCATGTGGCTATTAGCTATTCATGTGTCAATGATTTGGTCTTTTGTATTTAGTTAACAACCATTTCTATGTTGATTCCAACTTCAGCTTCTTCTCTTTCTCTGCCTTTTCTACCTCTTCTCCTCCTCCTCCTTTCCTGAACATTTTGGCTTATAGAAAACAAGAAATTAAATTTTAGGTAAGTGACCTATATGTAACGAAGTCCTAACTTCTTAAGCCTAGTTTTTTTCCCCTTCTTATCAAGGTTGACAATGGTTTTGGTTCATTTTATTTTTCTCTCAATGATAGTTGAAAATTTAACCCCAAACTAGTTGATACTTTTATGGATTGGAAGTGTACAGGGAGACTAAACATGGATGTTCTTACTTAACCGGCCTCAAAATGGAAAATTATGTACAACCAAAAAGGTAATTCAATGTTGCATTTTAATTTAACTTCAATTGGGTATTTGAATTTGAATTCTGTTGTAGGATCCAAATGGATTTGTTTAATAGAAAGTTTTGGAAAGTGGTCTTATAAGACTCGGAATCCAATGGGTTTCTTTAGGTTTTTTGAATTCATAAAATGTTGAATGTATCACCTCAAATCTTCTAGACTTAACA

Coding sequence (CDS)

ATGGCTTTGGCGGACGTTACTCCTACGACCAAAGTTCGTCGGGAAACGGCGGCGAAAGCCGTGGAATCTCTTCTTCAATGGCGGAATTCCAAACGGGAGAAGCCCCAACTCTTCGACCAAGAAGATTTTCTATACCTCATCGTAACCCTGAAGAAGATCCCTCCCAAAGGTCGCACAAATCCTTACAAAATCCCTCTTCCACATTCCCTTCACTCCGACTCTTCCGAACTTTGTCTCATTATCGACGATAGAACCAAGTCCAATCTCACCAAGGATGATGCCCGGAAGAAAATACAGTCTGAAAACATCCCAATTTCGAAGGTAATCAAGTTGTCAAAGCTTAAATCCGATTACCGCCCCTTTGAAGCTAAACGGAAGCTCTGTGATTCGTACGATATGTTTTTCGCTGATGATAGAGTTATTCCGCTGTTGCCGAGTCTGTTGGGGAAGCACTTTTACAAAAAGAAGAAGATTCCGGTGCCGTTGAATCTGAGGCATAAGAATTGGAAAGAACAGGTCGAGAGGAGCTGTTCGTCGGGATTGTTGTATTTGAGGACAGGGACTTGTAGTGTGGTGAAAGTGGCGAGGACTTCGATGGAAGTTGAAGAGATCGTGGACAATGTGATTGCGGCCATTGATGGGATTGCAGAGGTTGTGCCTAAAAAATGGAGTAATGTGCGGTCGTTTTTTTTAAAGGTCCTTGAATCTATTGCATTACCAATTTACCAAACAGTGCCGGAGTTGAAGTTTAAGATTGAGGCCGGCGTGAAGGGGAAAGAAGATGAAATAACAAAAGAAGAAGAAGCAGCAAAGAGTCCTACTCCCGTAAAAGTTGGCAGCAAAAAAAGAGAGAAAATTGAGCAAAAAGAAGGGTAG

Protein sequence

MALADVTPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTNPYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSGLLYLRTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALPIYQTVPELKFKIEAGVKGKEDEITKEEEAAKSPTPVKVGSKKREKIEQKEG

Homology

[Close]

BLAST of Cucsat.G21365 vs. ExPASy Swiss-Prot
Match: O76021 (Ribosomal L1 domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RSL1D1 PE=1 SV=3)

HSP 1 Score: 156.4 bits (394), Expect = 5.0e-37
Identity = 95/281 (33.81%), Postives = 158/281 (56.23%), Query Frame = 0


Query: 7   TPTTKVRRETAAKAVESLL-QWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTNPYKIP 66
           T   ++ +E   KAV++LL   ++ K     L ++ + L+L+V L KIP K      ++ 
Sbjct: 26  TARKQLDKEQVRKAVDALLTHCKSRKNNYGLLLNENESLFLMVVLWKIPSKELR--VRLT 85

Query: 67  LPHSLHSDSSELCLIIDDRTKSNLTKDDA--RKKIQSENI-PISKVIKLSKLKSDYRPFE 126
           LPHS+ SDS ++CL   D   S   K +   RK +    I  +S++I L  LK +Y+ +E
Sbjct: 86  LPHSIRSDSEDICLFTKDEPNSTPEKTEQFYRKLLNKHGIKTVSQIISLQTLKKEYKSYE 145

Query: 127 AKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSGLL 186
           AK +L  S+D F  D R+  LLPSL+G+HFY++KK+PV +NL  KN   ++       +L
Sbjct: 146 AKLRLLSSFDFFLTDARIRRLLPSLIGRHFYQRKKVPVSVNLLSKNLSREINDCIGGTVL 205

Query: 187 YL-RTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALPI 246
            + ++G+CS +++    M++E I++N++A   G++E +P+KW +V+  F+K  +S ALPI
Sbjct: 206 NISKSGSCSAIRIGHVGMQIEHIIENIVAVTKGLSEKLPEKWESVKLLFVKTEKSAALPI 265

Query: 247 YQTVPE-----------LKFKIEAGVKGKEDEITKEEEAAK 272
           + +               K K EA  K +E    K++E  K
Sbjct: 266 FSSFVSNWDEATKRSLLNKKKKEARRKRRERNFEKQKERKK 304

[Close]

BLAST of Cucsat.G21365 vs. ExPASy Swiss-Prot
Match: Q5RCE6 (Ribosomal L1 domain-containing protein 1 OS=Pongo abelii OX=9601 GN=RSL1D1 PE=2 SV=2)

HSP 1 Score: 156.4 bits (394), Expect = 5.0e-37
Identity = 95/281 (33.81%), Postives = 158/281 (56.23%), Query Frame = 0


Query: 7   TPTTKVRRETAAKAVESLL-QWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTNPYKIP 66
           T   ++ +E   KAV++LL   ++ K     L ++ + L+L+V L KIP K      ++ 
Sbjct: 26  TARKQLDKEQVRKAVDALLTHCKSRKNNYGLLLNENESLFLMVVLWKIPSKELR--VRLT 85

Query: 67  LPHSLHSDSSELCLIIDDRTKSNLTKDDA--RKKIQSENI-PISKVIKLSKLKSDYRPFE 126
           LPHS+ SDS ++CL   D   S   K +   RK +    I  +S++I L  LK +Y+ +E
Sbjct: 86  LPHSIRSDSEDICLFTKDEPNSTPEKTEQFYRKLLNKHGIKTVSQIISLQTLKKEYKSYE 145

Query: 127 AKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSGLL 186
           AK +L  S+D F  D R+  LLPSL+G+HFY++KK+PV +NL  KN   ++       +L
Sbjct: 146 AKLRLLSSFDFFLTDARIRRLLPSLIGRHFYQRKKVPVSVNLLSKNLSREINDCIGGTVL 205

Query: 187 YL-RTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALPI 246
            + ++G+CS +++    M++E I++N++A   G++E +P+KW +V+  F+K  +S ALPI
Sbjct: 206 NISKSGSCSAIRIGHVGMQIEHIIENIVAVTKGLSEKLPEKWESVKLLFVKTEKSAALPI 265

Query: 247 YQTVPE-----------LKFKIEAGVKGKEDEITKEEEAAK 272
           + +               K K EA  K +E    K++E  K
Sbjct: 266 FSSFVSNWDEATKRSLLNKKKKEARRKRRERNFEKQKERKK 304

[Close]

BLAST of Cucsat.G21365 vs. ExPASy Swiss-Prot
Match: Q8BVY0 (Ribosomal L1 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rsl1d1 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.4e-36
Identity = 99/288 (34.38%), Postives = 168/288 (58.33%), Query Frame = 0


Query: 6   VTPTT--KVRRETAAKAVESLLQWRNSKREKPQ-LFDQEDFLYLIVTLKKIPPKGRTNPY 65
           VTPT   ++ RE   KAVE +     SK+   + L    + L+L+V L KIP K      
Sbjct: 23  VTPTALLQLDREQIRKAVEVISNRSKSKKNNNELLLSGSENLFLMVILWKIPEKELR--V 82

Query: 66  KIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSEN--IPISKVIKLSKLKSDYRP 125
           K+PLPHS+ S+SS++CL   D   S    +   KK+  ++    IS++I    LK++Y+ 
Sbjct: 83  KVPLPHSILSESSDVCLFTKDEFDSPEQTEGFYKKLLKKHGVNTISQIIPFKTLKTEYKA 142

Query: 126 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSG 185
           +EAK +L  S+++F  D R+   LPS +G+HFY++KK+PV +NL  KN  +++ R  +  
Sbjct: 143 YEAKLRLLGSFEVFITDARIRRHLPSHIGRHFYQRKKVPVSVNLLAKNLSKEINRCITGT 202

Query: 186 LLYL-RTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIAL 245
           +L + + G+CS +++  T ME E IVDN++A  + ++E +P+KW +V+  FLK  +S++L
Sbjct: 203 VLNISKRGSCSTIRIGHTGMETEHIVDNILAVSEMLSEKLPEKWQSVKLLFLKTEKSVSL 262

Query: 246 PIYQTVPELKFKIEAGVKG--KEDEITKEEEAAKSPTPVKVGSKKREK 286
           PI+ +    + +    ++   K++   ++ E AK     K+  KK +K
Sbjct: 263 PIFSSFVTSQDENAVSLRSLRKQELKKRKRENAKLKKESKMLRKKSKK 308

[Close]

BLAST of Cucsat.G21365 vs. ExPASy Swiss-Prot
Match: A4FV97 (Ribosomal L1 domain-containing protein 1 OS=Bos taurus OX=9913 GN=RSL1D1 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.1e-31
Identity = 89/280 (31.79%), Postives = 157/280 (56.07%), Query Frame = 0


Query: 15  ETAAKAVESLL-QWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTNPYKIPLPHSLHSD 74
           E   KAVE+LL   R+ K     L ++ +  +L+V L KIP K      ++ LPH + SD
Sbjct: 32  EQVKKAVEALLAHSRSRKNANGLLLNENENFFLMVVLWKIPSKELR--VRLSLPHGIRSD 91

Query: 75  SSELCLIIDD--RTKSNLTKDDARKKIQSENI-PISKVIKLSKLKSDYRPFEAKRKLCDS 134
            +++CL   D     S  T+   +K + +  I  IS++I    LK +Y+ +EAK +L  S
Sbjct: 92  LADVCLFTKDEPNLSSEQTERYYKKLLNNHGIKTISQIIPFRTLKKEYKAYEAKLRLLGS 151

Query: 135 YDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSGLLYL-RTGTC 194
           +D F  D R+  LLPS LG+HFY +KK+PV +NL+ K    ++       +L + ++G+C
Sbjct: 152 FDFFITDARIRRLLPSHLGRHFYNRKKVPVSVNLQSKTLSREINDCIGGTVLNISKSGSC 211

Query: 195 SVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALPIYQTVPELK 254
           S +++  T M ++ IV+NV+A    +++ +P+KW +V+  F+K   S++LP++ +   + 
Sbjct: 212 STIRIGHTGMPIQHIVENVVAVAKSLSQKLPEKWESVKLLFVKTERSVSLPVFSSF--VS 271

Query: 255 FKIEAGVKGKEDEITKEEEAAKSPTPVKVGSKKREKIEQK 290
            + EA      D + K  + ++  T  +   +++EK E+K
Sbjct: 272 SQGEAKGLRTRDLLKKVSKKSRKKTE-RALKRQQEKKEKK 306

[Close]

BLAST of Cucsat.G21365 vs. ExPASy Swiss-Prot
Match: Q9UT32 (Putative ribosome biogenesis protein C8F11.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC8F11.04 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.8e-26
Identity = 90/258 (34.88%), Postives = 139/258 (53.88%), Query Frame = 0


Query: 39  DQEDFLYLIVTLKKIPPKGRTNPYKIPLPHSLHSDSSELCLIIDD--RTKSNLTKDDARK 98
           D E     + TLK I    +  PYKI + + +   SSE CLI+ D  R   +L  +    
Sbjct: 49  DIEPVWLQLATLKFIGNNRKLIPYKIAIKNPVIPSSSEACLIVKDPQRVYKDLVNEAGLS 108

Query: 99  KIQSENIPISKVIKLSKLKSDYRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKK 158
           K+      +++VI LSKLK+ +  +E KR+L D +D+F ADDRVIP+LP +LGK FY+K 
Sbjct: 109 KV------VTRVIGLSKLKAKWNSYEQKRQLRDQFDIFLADDRVIPMLPRILGKTFYQKS 168

Query: 159 KIPVPLNLRHKNWKEQVERSCSS--GLLYLRTGTCS--VVKVARTSMEVEEIVDNVIAAI 218
           K+PVP+ +  K   EQ++R   S  G  Y  +  CS  ++K    S    E+ +NV + +
Sbjct: 169 KVPVPVKI-SKGTAEQLKREVVSAYGATYFNSAPCSSFMIKCGHVSNTSTELAENVESIL 228

Query: 219 DGIAE-VVPKKWSNVRSFFLKVLESIALPIYQTVPELKFKIEAGVKGKEDEITKEEEAA- 278
             +++ +VP     + S  LK  +SIA+P++   P LK  I +  K     +TKE  ++ 
Sbjct: 229 QFVSKHIVPDGAKGIASIHLKTSQSIAIPLWNN-PNLKELIASSRK----VVTKETASSK 288

Query: 279 -KSPTPVKVGSKKREKIE 288
            KS        KK++K+E
Sbjct: 289 RKSDEESLPSQKKQKKVE 294

[Close]

BLAST of Cucsat.G21365 vs. NCBI nr
Match: XP_004143917.1 (ribosomal L1 domain-containing protein 1 [Cucumis sativus] >XP_011654759.1 ribosomal L1 domain-containing protein 1 [Cucumis sativus] >XP_031741943.1 ribosomal L1 domain-containing protein 1 [Cucumis sativus] >KGN50109.1 hypothetical protein Csa_000511 [Cucumis sativus])

HSP 1 Score: 548 bits (1411), Expect = 8.44e-195
Identity = 285/291 (97.94%), Postives = 288/291 (98.97%), Query Frame = 0


Query: 1   MALADVTPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTN 60
           MALADVTPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTN
Sbjct: 1   MALADVTPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTN 60

Query: 61  PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120
           PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP
Sbjct: 61  PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120

Query: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSG 180
           FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSG
Sbjct: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSG 180

Query: 181 LLYLRTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALP 240
           LLYLRTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALP
Sbjct: 181 LLYLRTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALP 240

Query: 241 IYQTVPELKFKIEAGVKGKEDEITKEEEAAKSPTPVKVGSKKREKIEQKEG 291
           IYQTVPELKFKIEAGVKGKEDEITKEEEAAKSPTPVKVGSKK  K+ +K+G
Sbjct: 241 IYQTVPELKFKIEAGVKGKEDEITKEEEAAKSPTPVKVGSKKERKLSKKKG 291

[Close]

BLAST of Cucsat.G21365 vs. NCBI nr
Match: XP_008437251.1 (PREDICTED: ribosomal L1 domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 501 bits (1289), Expect = 3.07e-176
Identity = 264/302 (87.42%), Postives = 277/302 (91.72%), Query Frame = 0


Query: 1   MALADVTPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTN 60
           MALADV P TKV RETA KAVESLLQWR+SKREKPQLFDQEDFLYL+VTLKKIPPKGRTN
Sbjct: 1   MALADVNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTN 60

Query: 61  PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120
           PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP
Sbjct: 61  PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120

Query: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSG 180
           FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQ+E++CSSG
Sbjct: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSG 180

Query: 181 LLYLRTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALP 240
           LLYLRTGTCSVVKVA+TSM VEEIVDNVIAAIDGIAEVVPKKWSNVRSF LKVLESIALP
Sbjct: 181 LLYLRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALP 240

Query: 241 IYQTVPELKFKIEAGVKGKEDEITKEE-----------EAAKSPTPVKVGSKKREKIEQK 291
           IYQTVPELKFKIEAGVK K+DEIT+EE           EA K P  VKV +KK +K+ +K
Sbjct: 241 IYQTVPELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEAVKIPASVKVTNKKEKKLSKK 300

[Close]

BLAST of Cucsat.G21365 vs. NCBI nr
Match: KAA0042769.1 (ribosomal L1 domain-containing protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 500 bits (1287), Expect = 6.42e-176
Identity = 263/303 (86.80%), Postives = 277/303 (91.42%), Query Frame = 0


Query: 1   MALADVTPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTN 60
           MALADV P TKV RETA KAVESLLQWR+SKREKPQLFDQEDFLYL+VTLKKIPPKGRTN
Sbjct: 1   MALADVNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTN 60

Query: 61  PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120
           PYK+PLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP
Sbjct: 61  PYKVPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120

Query: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSG 180
           FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQ+E++CSSG
Sbjct: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSG 180

Query: 181 LLYLRTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALP 240
           LLYLRTGTCSVVKVA+TSM VEEIVDNVIAAIDGIAEVVPKKWSNVRSF LKVLESIALP
Sbjct: 181 LLYLRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALP 240

Query: 241 IYQTVPELKFKIEAGVKGKEDEITKEE------------EAAKSPTPVKVGSKKREKIEQ 291
           IYQTVPELKFKIEAGVK K+DEIT+EE            EA K P  VKV +KK +K+ +
Sbjct: 241 IYQTVPELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEEAVKIPASVKVTNKKEKKLSK 300

[Close]

BLAST of Cucsat.G21365 vs. NCBI nr
Match: XP_038875579.1 (ribosomal L1 domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 498 bits (1282), Expect = 6.26e-174
Identity = 257/290 (88.62%), Postives = 275/290 (94.83%), Query Frame = 0


Query: 5   DVTPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTNPYKI 64
            VTP+++VRRETA KAVESLLQWRNSKREKPQLFDQEDFLYL+VTLKKIPPKGRTNPYKI
Sbjct: 6   SVTPSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVTLKKIPPKGRTNPYKI 65

Query: 65  PLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAK 124
           PLPHSLHSDSSE+CLIIDDRTKSNLTKD ARKKIQSENIPISKVIKLSKLKSDYRPFEAK
Sbjct: 66  PLPHSLHSDSSEICLIIDDRTKSNLTKDHARKKIQSENIPISKVIKLSKLKSDYRPFEAK 125

Query: 125 RKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSGLLYL 184
           RKLCDSYDMFFADDRVIPL+PSLLGKHFYKKKKIPVPLNLRH+NWKEQ+E+SCSSGLLYL
Sbjct: 126 RKLCDSYDMFFADDRVIPLMPSLLGKHFYKKKKIPVPLNLRHQNWKEQIEKSCSSGLLYL 185

Query: 185 RTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALPIYQT 244
           RTGTCSVVKVA+TSMEVEEIV NVIAAIDGIAEVVPKKWSNVRSF LKVLESIALPIYQT
Sbjct: 186 RTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQT 245

Query: 245 VPELKFKIEAGVKGKEDEITKE---EEAAKSPTPVKVGSKKREKIEQKEG 291
           VPELKFKIEA VKGKE+E+ KE   E+A KSPT VKV +KK +K+ +K+G
Sbjct: 246 VPELKFKIEASVKGKEEEMEKEKEKEDAGKSPTSVKVSNKKEKKLSKKKG 295

[Close]

BLAST of Cucsat.G21365 vs. NCBI nr
Match: XP_022928870.1 (ribosomal L1 domain-containing protein 1-like [Cucurbita moschata] >KAG7016962.1 Ribosomal L1 domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 482 bits (1240), Expect = 1.62e-167
Identity = 251/292 (85.96%), Postives = 269/292 (92.12%), Query Frame = 0


Query: 1   MALAD-VTPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRT 60
           MA +D V  +++VRRETA KAVESLLQWRNSKREKPQLFDQEDFLYL+V LKKIPPKGRT
Sbjct: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT 60

Query: 61  NPYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPHS  SDSSE+CLIIDDR++SNLTKD+ARKKIQSENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSS 180
           PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQ+ERSCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180

Query: 181 GLLYLRTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIAL 240
            LLYLRTGTCSVVKVA+TSMEVEEIV NVIAAIDGIAE+VPKKWSNVRSF LKVLESIAL
Sbjct: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240

Query: 241 PIYQTVPELKFKIEAGVKGKEDEITKEEEAAKSPTPVKVGSKKREKIEQKEG 291
           PIYQTVPELK KI+A VKG+E    KE+EA KSPTPVKV +KK +K   K+G
Sbjct: 241 PIYQTVPELKLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNKKEKKSSMKKG 292

[Close]

BLAST of Cucsat.G21365 vs. ExPASy TrEMBL
Match: A0A0A0KML2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154220 PE=4 SV=1)

HSP 1 Score: 548 bits (1411), Expect = 4.09e-195
Identity = 285/291 (97.94%), Postives = 288/291 (98.97%), Query Frame = 0


Query: 1   MALADVTPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTN 60
           MALADVTPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTN
Sbjct: 1   MALADVTPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTN 60

Query: 61  PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120
           PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP
Sbjct: 61  PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120

Query: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSG 180
           FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSG
Sbjct: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSG 180

Query: 181 LLYLRTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALP 240
           LLYLRTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALP
Sbjct: 181 LLYLRTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALP 240

Query: 241 IYQTVPELKFKIEAGVKGKEDEITKEEEAAKSPTPVKVGSKKREKIEQKEG 291
           IYQTVPELKFKIEAGVKGKEDEITKEEEAAKSPTPVKVGSKK  K+ +K+G
Sbjct: 241 IYQTVPELKFKIEAGVKGKEDEITKEEEAAKSPTPVKVGSKKERKLSKKKG 291

[Close]

BLAST of Cucsat.G21365 vs. ExPASy TrEMBL
Match: A0A1S3ATP9 (ribosomal L1 domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103482736 PE=4 SV=1)

HSP 1 Score: 501 bits (1289), Expect = 1.49e-176
Identity = 264/302 (87.42%), Postives = 277/302 (91.72%), Query Frame = 0


Query: 1   MALADVTPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTN 60
           MALADV P TKV RETA KAVESLLQWR+SKREKPQLFDQEDFLYL+VTLKKIPPKGRTN
Sbjct: 1   MALADVNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTN 60

Query: 61  PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120
           PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP
Sbjct: 61  PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120

Query: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSG 180
           FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQ+E++CSSG
Sbjct: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSG 180

Query: 181 LLYLRTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALP 240
           LLYLRTGTCSVVKVA+TSM VEEIVDNVIAAIDGIAEVVPKKWSNVRSF LKVLESIALP
Sbjct: 181 LLYLRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALP 240

Query: 241 IYQTVPELKFKIEAGVKGKEDEITKEE-----------EAAKSPTPVKVGSKKREKIEQK 291
           IYQTVPELKFKIEAGVK K+DEIT+EE           EA K P  VKV +KK +K+ +K
Sbjct: 241 IYQTVPELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEAVKIPASVKVTNKKEKKLSKK 300

[Close]

BLAST of Cucsat.G21365 vs. ExPASy TrEMBL
Match: A0A5A7TN28 (Ribosomal L1 domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002690 PE=4 SV=1)

HSP 1 Score: 500 bits (1287), Expect = 3.11e-176
Identity = 263/303 (86.80%), Postives = 277/303 (91.42%), Query Frame = 0


Query: 1   MALADVTPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTN 60
           MALADV P TKV RETA KAVESLLQWR+SKREKPQLFDQEDFLYL+VTLKKIPPKGRTN
Sbjct: 1   MALADVNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTN 60

Query: 61  PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120
           PYK+PLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP
Sbjct: 61  PYKVPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120

Query: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSG 180
           FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQ+E++CSSG
Sbjct: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSG 180

Query: 181 LLYLRTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALP 240
           LLYLRTGTCSVVKVA+TSM VEEIVDNVIAAIDGIAEVVPKKWSNVRSF LKVLESIALP
Sbjct: 181 LLYLRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALP 240

Query: 241 IYQTVPELKFKIEAGVKGKEDEITKEE------------EAAKSPTPVKVGSKKREKIEQ 291
           IYQTVPELKFKIEAGVK K+DEIT+EE            EA K P  VKV +KK +K+ +
Sbjct: 241 IYQTVPELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEEAVKIPASVKVTNKKEKKLSK 300

[Close]

BLAST of Cucsat.G21365 vs. ExPASy TrEMBL
Match: A0A6J1ESQ8 (ribosomal L1 domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111435655 PE=4 SV=1)

HSP 1 Score: 482 bits (1240), Expect = 7.86e-168
Identity = 251/292 (85.96%), Postives = 269/292 (92.12%), Query Frame = 0


Query: 1   MALAD-VTPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRT 60
           MA +D V  +++VRRETA KAVESLLQWRNSKREKPQLFDQEDFLYL+V LKKIPPKGRT
Sbjct: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT 60

Query: 61  NPYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPHS  SDSSE+CLIIDDR++SNLTKD+ARKKIQSENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSS 180
           PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQ+ERSCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180

Query: 181 GLLYLRTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIAL 240
            LLYLRTGTCSVVKVA+TSMEVEEIV NVIAAIDGIAE+VPKKWSNVRSF LKVLESIAL
Sbjct: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240

Query: 241 PIYQTVPELKFKIEAGVKGKEDEITKEEEAAKSPTPVKVGSKKREKIEQKEG 291
           PIYQTVPELK KI+A VKG+E    KE+EA KSPTPVKV +KK +K   K+G
Sbjct: 241 PIYQTVPELKLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNKKEKKSSMKKG 292

[Close]

BLAST of Cucsat.G21365 vs. ExPASy TrEMBL
Match: A0A6J1HY99 (ribosomal L1 domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111469121 PE=4 SV=1)

HSP 1 Score: 481 bits (1239), Expect = 1.12e-167
Identity = 252/292 (86.30%), Postives = 268/292 (91.78%), Query Frame = 0


Query: 1   MALAD-VTPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRT 60
           MA +D V  +++VRRETA KAVESLLQWRNSKREKPQLFD EDFLYL+V LKKIPPKGRT
Sbjct: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDLEDFLYLVVALKKIPPKGRT 60

Query: 61  NPYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPHSL SDSSE+CLIIDDR++SNLTKDDARKKIQSENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHSLRSDSSEICLIIDDRSRSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSS 180
           PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQ+ERSCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180

Query: 181 GLLYLRTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIAL 240
            LLYLRTGTCSVVKVA+TSMEVEEIV NVIAAIDGIAE+VPKKWSNVRSF LKVLESIAL
Sbjct: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240

Query: 241 PIYQTVPELKFKIEAGVKGKEDEITKEEEAAKSPTPVKVGSKKREKIEQKEG 291
           PIYQTVPELK KI+A VKG E    KE+EA KSPTPVKV +KK +K   K+G
Sbjct: 241 PIYQTVPELKLKIDAAVKGDEKGTEKEDEAGKSPTPVKVSNKKEKKSRMKKG 292

The following BLAST results are available for this feature:

BLAST of Cucsat.G21365 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O76021	5.0e-37	33.81	Ribosomal L1 domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RSL1D1 PE=1 ...	[more]
Q5RCE6	5.0e-37	33.81	Ribosomal L1 domain-containing protein 1 OS=Pongo abelii OX=9601 GN=RSL1D1 PE=2 ...	[more]
Q8BVY0	9.4e-36	34.38	Ribosomal L1 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rsl1d1 PE=1...	[more]
A4FV97	3.1e-31	31.79	Ribosomal L1 domain-containing protein 1 OS=Bos taurus OX=9913 GN=RSL1D1 PE=2 SV...	[more]
Q9UT32	6.8e-26	34.88	Putative ribosome biogenesis protein C8F11.04 OS=Schizosaccharomyces pombe (stra...	[more]

BLAST of Cucsat.G21365 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143917.1	8.44e-195	97.94	ribosomal L1 domain-containing protein 1 [Cucumis sativus] >XP_011654759.1 ribos...	[more]
XP_008437251.1	3.07e-176	87.42	PREDICTED: ribosomal L1 domain-containing protein 1-like [Cucumis melo]	[more]
KAA0042769.1	6.42e-176	86.80	ribosomal L1 domain-containing protein 1-like [Cucumis melo var. makuwa]	[more]
XP_038875579.1	6.26e-174	88.62	ribosomal L1 domain-containing protein 1-like [Benincasa hispida]	[more]
XP_022928870.1	1.62e-167	85.96	ribosomal L1 domain-containing protein 1-like [Cucurbita moschata] >KAG7016962.1...	[more]

BLAST of Cucsat.G21365 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KML2	4.09e-195	97.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154220 PE=4 SV=1	[more]
A0A1S3ATP9	1.49e-176	87.42	ribosomal L1 domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5A7TN28	3.11e-176	86.80	Ribosomal L1 domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=119...	[more]
A0A6J1ESQ8	7.86e-168	85.96	ribosomal L1 domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1HY99	1.12e-167	86.30	ribosomal L1 domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	3.40.50.790		coord: 87..179 e-value: 5.2E-16 score: 60.5
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 34..236 e-value: 5.4E-61 score: 205.9
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 17..241 e-value: 3.67115E-46 score: 152.723
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..291
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 10..281
None	No IPR available	PANTHER	PTHR23105:SF31	RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1	coord: 10..281
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 34..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G21365.T1	Cucsat.G21365.T1	mRNA
Cucsat.G21365.T2	Cucsat.G21365.T2	mRNA
Cucsat.G21365.T3	Cucsat.G21365.T3	mRNA
Cucsat.G21365.T4	Cucsat.G21365.T4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
cellular_component	GO:0030686	90S preribosome
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding