Cucsat.G21345 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G21345
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	40S ribosomal protein S10-1
Location	ctg910: 1519311 .. 1521069 (+)
RNA-Seq Expression	Cucsat.G21345
Synteny	Cucsat.G21345

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGTCAAAGTTTCAGAGATTTAGGGCTTTACGCTGTGAAGGAAGATTGTGAAAGGGTTTCTTTCTTAGCTGCCGCTTCTTCCTGCCGCCGCCGTCGTCACCGATCACTTCGTCAAAATGGTACGTCCCTTTTCCTGTCTCCTCACATTTTAGGCTATGAATTATTCGTTTGTTCAACTAGAGACCAAAGGAAAATGTTAGTGAAAATTGAATTAGCGATAAGTAGTTGTTAATCCCGTCAAAAGCTCGTTGATTTGAGCCGTTCATCAATGTGTTTGGTTGGATTTGGATGAGGAGTGAGATCTGGATGCCACTAGTCTTACTGACCTGAACTCTGAAATGTGAAATGTTCTAATTTTGTTGTATATGATCTTAATCGACCATCGACTGGGAGTAAGTTTGTTTAAACGATATGAATGTTTCCCTTTTTAGATCATTCCAGAGAAGAATCGCAAAGAAATTTCCAAGTACCTCTTTCAAGGTATTGAATTTTACTGTCGTCTGTGTTTGTTGTTTTTAGGGTTTTTTTTCTTGTTCATCTTCGTCCGGTTATTGATTGTTGGTTTGTTGTTGTTTTGCATCAGAGGGAGTTTGCTATGCCAAGAAGGACTACAATCTGGCCAAGCACCCGGAAATCGATGTGCCAAATTTGCAAGTGATCAAGCTGATGCAGAGCTTCAAATCTAAGGAGTACGTTCGCGAGACATTTGCCTGGATGCATTACTACTGGTACCTCACAAACGATGGCATTGAGTTTTTGAGGACTTACCTGAATCTCCCTTCAGAAATTGTCCCGGCTACTTTGAAGAAACAAGCTAAGCCCGCTGGTCGACCATTTGGTGGCCCATCTGGAGACCGCCCACGGTAAATCTTCTGCTCTTCTTATGATGATTTCCTCCCCTTTGCTTATTGGTTTTTGCTGGGTTTTACTTTTAGCTTGTTGAGTTTACTCTGTATTAATGCTTTCTTGTTGTATAATTGTCAGTTCTAAACGTAGGTTATAACTGCTATGATTAGATTGGATTCATAAATTTATCCTTTTACATTGATATCACCGTACTACTGATTCTACACTGTACTGGTCTTTGAGTTGGTTTGTAGTTTGATTCTGACTGTTCATCAATCCTTATCCTATTGTATTGCTCTTTTTAGTGGTCCTTCAAGATTTGATGGAGAAAGAAGATTTGGTGACCGAGATGGCTACCGTGGAGGTCCTCGTGGGCCTGGTGGTGATTTCGGTGATAAGGGTGGAGCCCCTGCTGATTACAGACCTTCATTCGGGGTATGCAATTTTACCACTCTTTCTATTTTTGCAATTTTGTTATTCATATGTTCAAATTAGATTTGCACATTGCAACTGCTAGGGACTGGTTGATCTTTACATTTCTAACATTAGTTACAGCTTTCTCTCCCAGTTGAGGATAGCAAAATTAATGGCCTTTTAAGTGATCTATGTTCGTTCTTCAATATCGCAGGGTCCTGGCGGAAGGCCTGGCTTTGGCCGTGGAGCTGGTGGCTATGGGGGAGCACCTGCACCATCAAATCTTGAATGAACGAACAACATAGGTGTATGGGAGTGTTTTTGTTAGTTTAGTTTCTAAGCAAATTGAATCAAAGATGTTGAATTAAACTCATGAGATCTTATCAGTTTTGTTTGCCTATAATTAATTGTTGGATATTTGGTTGCTGAACTCTCTTTAATGCCACCTATTACAGATTCCTCTAATCCCCTTCACACTTCTTTTATATTATGGAATTCATTAACTTATTTCTGAAGCATTCTAGCCTCATTTTCAATCTTGTCTTTTCTAAATATACTTCAATCAATAGTTCGATTGTACCTGTGTT

Coding sequence (CDS)

ATGATCATTCCAGAGAAGAATCGCAAAGAAATTTCCAAGTACCTCTTTCAAGAGGGAGTTTGCTATGCCAAGAAGGACTACAATCTGGCCAAGCACCCGGAAATCGATGTGCCAAATTTGCAAGTGATCAAGCTGATGCAGAGCTTCAAATCTAAGGAGTACGTTCGCGAGACATTTGCCTGGATGCATTACTACTGGTACCTCACAAACGATGGCATTGAGTTTTTGAGGACTTACCTGAATCTCCCTTCAGAAATTGTCCCGGCTACTTTGAAGAAACAAGCTAAGCCCGCTGGTCGACCATTTGGTGGCCCATCTGGAGACCGCCCACGTGGTCCTTCAAGATTTGATGGAGAAAGAAGATTTGGTGACCGAGATGGCTACCGTGGAGGTCCTCGTGGGCCTGGTGGTGATTTCGGTGATAAGGGTGGAGCCCCTGCTGATTACAGACCTTCATTCGGGGGTCCTGGCGGAAGGCCTGGCTTTGGCCGTGGAGCTGGTGGCTATGGGGGAGCACCTGCACCATCAAATCTTGAATGA

Protein sequence

MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

Homology

[Close]

BLAST of Cucsat.G21345 vs. ExPASy Swiss-Prot
Match: Q9LTF2 (40S ribosomal protein S10-3 OS=Arabidopsis thaliana OX=3702 GN=RPS10C PE=1 SV=2)

HSP 1 Score: 205.7 bits (522), Expect = 2.7e-52
Identity = 96/111 (86.49%), Postives = 103/111 (92.79%), Query Frame = 0


Query: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MII E NRKEI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 112
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGP GDR R
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSR 111

[Close]

BLAST of Cucsat.G21345 vs. ExPASy Swiss-Prot
Match: Q9SW09 (40S ribosomal protein S10-1 OS=Arabidopsis thaliana OX=3702 GN=RPS10A PE=1 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.8e-51
Identity = 94/111 (84.68%), Postives = 102/111 (91.89%), Query Frame = 0


Query: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MII E NR+EI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 112
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGP GDR R
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQR 111

[Close]

BLAST of Cucsat.G21345 vs. ExPASy Swiss-Prot
Match: P0DKK8 (40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-1 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 4.0e-51
Identity = 97/112 (86.61%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIIP+KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+
Sbjct: 1   MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG-GPSGDRPR 112
           W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRPFG GP GDRPR
Sbjct: 61  WQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPR 112

[Close]

BLAST of Cucsat.G21345 vs. ExPASy Swiss-Prot
Match: P0DKK9 (40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-2 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 4.0e-51
Identity = 97/112 (86.61%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIIP+KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+
Sbjct: 1   MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG-GPSGDRPR 112
           W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRPFG GP GDRPR
Sbjct: 61  WQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPR 112

[Close]

BLAST of Cucsat.G21345 vs. ExPASy Swiss-Prot
Match: Q9FFS8 (40S ribosomal protein S10-2 OS=Arabidopsis thaliana OX=3702 GN=RPS10B PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.0e-47
Identity = 93/112 (83.04%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETF 60
           MII E NR+EISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1   MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60

Query: 61  AWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 112
           AWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPR
Sbjct: 61  AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG-GGDRPR 111

[Close]

BLAST of Cucsat.G21345 vs. NCBI nr
Match: XP_016898887.1 (PREDICTED: 40S ribosomal protein S10-1 [Cucumis melo])

HSP 1 Score: 231 bits (588), Expect = 1.91e-75
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 111
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 111

[Close]

BLAST of Cucsat.G21345 vs. NCBI nr
Match: XP_011654726.1 (40S ribosomal protein S10-1 [Cucumis sativus] >KAA0042728.1 40S ribosomal protein S10-1 [Cucumis melo var. makuwa] >KGN50065.1 hypothetical protein Csa_000371 [Cucumis sativus])

HSP 1 Score: 231 bits (588), Expect = 1.91e-75
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 111
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 111

[Close]

BLAST of Cucsat.G21345 vs. NCBI nr
Match: XP_038907155.1 (40S ribosomal protein S10-1-like [Benincasa hispida])

HSP 1 Score: 228 bits (580), Expect = 3.17e-74
Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 111
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR FGGPSGDRPR
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRSFGGPSGDRPR 111

[Close]

BLAST of Cucsat.G21345 vs. NCBI nr
Match: XP_023549574.1 (40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo] >KAG6579529.1 40S ribosomal protein S10-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 226 bits (577), Expect = 9.07e-74
Identity = 109/111 (98.20%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MII EKNR+EISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 111
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 111

[Close]

BLAST of Cucsat.G21345 vs. NCBI nr
Match: XP_022928970.1 (40S ribosomal protein S10-1-like [Cucurbita moschata])

HSP 1 Score: 226 bits (577), Expect = 9.07e-74
Identity = 109/111 (98.20%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MII EKNR+EISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 111
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 111

[Close]

BLAST of Cucsat.G21345 vs. ExPASy TrEMBL
Match: A0A5A7TIX3 (40S ribosomal protein S10-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002270 PE=4 SV=1)

HSP 1 Score: 231 bits (588), Expect = 9.26e-76
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 111
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 111

[Close]

BLAST of Cucsat.G21345 vs. ExPASy TrEMBL
Match: A0A0A0KK65 (S10_plectin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152800 PE=4 SV=1)

HSP 1 Score: 231 bits (588), Expect = 9.26e-76
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 111
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 111

[Close]

BLAST of Cucsat.G21345 vs. ExPASy TrEMBL
Match: A0A1S4DSB0 (40S ribosomal protein S10-1 OS=Cucumis melo OX=3656 GN=LOC103483069 PE=4 SV=1)

HSP 1 Score: 231 bits (588), Expect = 9.26e-76
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 111
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 111

[Close]

BLAST of Cucsat.G21345 vs. ExPASy TrEMBL
Match: A0A6J1I4J7 (40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111469100 PE=4 SV=1)

HSP 1 Score: 226 bits (577), Expect = 4.39e-74
Identity = 109/111 (98.20%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MII EKNR+EISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 111
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 111

[Close]

BLAST of Cucsat.G21345 vs. ExPASy TrEMBL
Match: A0A6J1ESX8 (40S ribosomal protein S10-1-like OS=Cucurbita moschata OX=3662 GN=LOC111435712 PE=4 SV=1)

HSP 1 Score: 226 bits (577), Expect = 4.39e-74
Identity = 109/111 (98.20%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 1   MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MII EKNR+EISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 111
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPR 111

The following BLAST results are available for this feature:

BLAST of Cucsat.G21345 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTF2	2.7e-52	86.49	40S ribosomal protein S10-3 OS=Arabidopsis thaliana OX=3702 GN=RPS10C PE=1 SV=2	[more]
Q9SW09	1.8e-51	84.68	40S ribosomal protein S10-1 OS=Arabidopsis thaliana OX=3702 GN=RPS10A PE=1 SV=1	[more]
P0DKK8	4.0e-51	86.61	40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-1 ...	[more]
P0DKK9	4.0e-51	86.61	40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-2 ...	[more]
Q9FFS8	2.0e-47	83.04	40S ribosomal protein S10-2 OS=Arabidopsis thaliana OX=3702 GN=RPS10B PE=2 SV=1	[more]

BLAST of Cucsat.G21345 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016898887.1	1.91e-75	100.00	PREDICTED: 40S ribosomal protein S10-1 [Cucumis melo]	[more]
XP_011654726.1	1.91e-75	100.00	40S ribosomal protein S10-1 [Cucumis sativus] >KAA0042728.1 40S ribosomal protei...	[more]
XP_038907155.1	3.17e-74	99.10	40S ribosomal protein S10-1-like [Benincasa hispida]	[more]
XP_023549574.1	9.07e-74	98.20	40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo] >KAG6579529.1 40S ...	[more]
XP_022928970.1	9.07e-74	98.20	40S ribosomal protein S10-1-like [Cucurbita moschata]	[more]

BLAST of Cucsat.G21345 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TIX3	9.26e-76	100.00	40S ribosomal protein S10-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A0A0KK65	9.26e-76	100.00	S10_plectin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152800...	[more]
A0A1S4DSB0	9.26e-76	100.00	40S ribosomal protein S10-1 OS=Cucumis melo OX=3656 GN=LOC103483069 PE=4 SV=1	[more]
A0A6J1I4J7	4.39e-74	98.20	40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111469100 PE=...	[more]
A0A6J1ESX8	4.39e-74	98.20	40S ribosomal protein S10-1-like OS=Cucurbita moschata OX=3662 GN=LOC111435712 P...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 1..104 e-value: 6.9E-48 score: 162.9
IPR005326	Plectin/S10, N-terminal	PFAM	PF03501	S10_plectin	coord: 3..94 e-value: 2.8E-43 score: 145.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..128
None	No IPR available	PANTHER	PTHR12146:SF20	40S RIBOSOMAL PROTEIN S10-1-LIKE	coord: 1..178
IPR037447	40S Ribosomal protein S10	PANTHER	PTHR12146	40S RIBOSOMAL PROTEIN S10	coord: 1..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G21345.T1	Cucsat.G21345.T1	mRNA
Cucsat.G21345.T5	Cucsat.G21345.T5	mRNA
Cucsat.G21345.T3	Cucsat.G21345.T3	mRNA
Cucsat.G21345.T6	Cucsat.G21345.T6	mRNA
Cucsat.G21345.T4	Cucsat.G21345.T4	mRNA
Cucsat.G21345.T2	Cucsat.G21345.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0022627	cytosolic small ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome