Cucsat.G21280 (gene) Cucumber (B10) v3

Overview
NameCucsat.G21280
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionUBA domain-containing protein
Locationctg910: 383968 .. 386331 (+)
RNA-Seq ExpressionCucsat.G21280
SyntenyCucsat.G21280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTCAAAAAACAAATCTTAATCGGAGAAATTTGTTGAAAATGAAATCCAAAATTTGAAAATATAAAATGGGAATGATTAGATTAATATTTTGCGTTAAAGTTTGAAACATATTTTGTTTGACAATCGTCCACCGTCTTTCCCTTGAGCCTTTTCCTCTGTTCTCCAATGGCGTACGATTTCAGAAACAACTCCGGCCACTACGATTCTCACCAGCCGATGTACACCTCAACCGCTTCTTCTTCCCCATCTCCTTCTCCCCATCCCATGTATTCACATTCAATGTACCCCAGAATCGGTCAACAAGCTCCTTCATCAACCCCTCCGGTGGCCCGTCTCTCATCCCATCATTATTCTTCTTCTCCATCCCCATCACCTTCTTCTTCGTGTAAATTCATCGGTTTCCATCTTATTTTATAATGGGGTTTTGACGAATCGCTTTGTTTTGTAGTTTATGTGAATTTCAGAAATGATTTTAGGGTTTTCTTGGATCATTTGATTTTCCCATGAAATTGATGGAATTTTTTTTATTGTACAGCAGGATTGGGCATCAGGGTTACTATTAAACCGGAATATCGAATTACTCCTCCGGTGCGTTTTGATTTTCTTGCTCTAGATTGTGGATTCTGTTTTGAATGTGAATTGGATCTTGATATTGGTGACTTTCTGTTTGGTTCTATGGTTGTTTTGGGTTTTAATGGCTTGGCGTTTTCTTATAGCCTCAATTATCTCCACAAGTTGGAGATATTCCTCGGAGCAATTTCCAATTTGATTTTGAGTTTGAGAAAAAGGTTTTAGCTGAAGCAGAGAAAGAAGCTCCAAATTGGAATCGGTTTGGGTTGGAACATCCTCCTCCTAAACCAGTGGAGTCCACATCTTCAATGGTAACTCTTTCTTTTTAATTCGTATGCTCTTTTTTTCTTCATCAGCGAGCTTCTTAACTAAGACTTTATCTATGAAAGATTCTCCCTGTAAACATATCTATGAAAGATTCTCCCTGTAAACATATCTATGAAAGATTCTCCCTGTAAACATATTTGTAATTTTTAATCTGTAGTAGGTTATTTCCTCATCGTTGGCATCATTAATCACATTTATATTGCATTAGAAATTTTATTGTTTATGATCTGCAAACTAAAGGTCTTTGTTTCTTGTTATTTATTTATTCATTCATTTTGTGTTGACTATCTCTTGAAAAACAAAAAAACTACTTGATTATATTTGATTTCGCTTTTTTCACTTTTCAAAATAGAACTATATGGTATGTCTCACAGTCAATGTTCCATAATCTAACTTATGTGTAAACACATGTTTCCTTGTAGGGTTCAATTGGAGATCCAGTTGTGAGCAAGTATGTTGCATCTGGCTTGAATCGGGAAGCTGTTTCATTTGCAGTTGCTAACTATGGAGACAATCCAACCAAGGTAATTATGAATTATTGGTGCAGTGACACCCTAGGGAAATGGGATATGATCTCATTGTAATGTATAGTATTTGTGGCATTTGATATATATACTTGATAAACTTCCATGATTGACCCAATGATCAATAAGAGGCAATAATGTAAACAGTGAAGTGCTTAAAGGAGGAGTTGGATTTAACCATAGTGGTCACCTACTTAGGATTTAATATCTTATTATGAGTTTTATTGCCATCTAAGTATAGGGAGTTAGATAATATTCCCATGAGAATAATTGAGACATGTATATATAGCCCATTTATACAACATGGTGAAGTGGTCCTCTTGAAAGAGAGGGTGGGTGCCTTTGGGAATGTGGACATAGTGGTGCATGATTGTTGTCACTTGTCACCTAGTGGTATAAGGTATTAACAATGCTAAGTTGAAGGAAGGTCAAGTATTATCAGTGATTAGTCGGAGGAAAGTCAGGATTATATCTGTTAAGTTGTAGGAAGGTCTGGACGACAATAATCATTATCTAGAGATGTTGAGTTATCATGCCCTTTCACCTTAGGACACGTGCTATAATGGCCAGAACAAAAATATGTGTGCTTCATATGATTTATTACATACTAGATAATGTGTGTAAACAACTTGCTGGATTATCTCTACTTCTCACTCTACTATAAATATATTTAAGTTGCTTGCTTGCAATGCACAGATGGAGGATCCATGCACAGCTCTTTGATTTATCTTATAATTTACGCTATTTGATTCCATACTACTTAACCTTCAAAGTGGTTAAAATGTAGCTTTGTTCTCTAAAGTCTACTTTCTTTCTTAATCTGGTTATTAAGTTCAAAACGCCCTATTTAGTGAGTTCGAATAACTTTCAGTCTTAGTCTCTCTAATTCCATCTTGTGAAGCACTTCATTCTATGATGTCCTTCATGTTTATTTTTTGTGTTTTTGTTTGGCTTTGCTGACAGTCTCTGAGTAACTTTGTAGGTTCAAGAATTTGTAAAAGGCTACACACTCCTACGAGA

Coding sequence (CDS)

ATGGCGTACGATTTCAGAAACAACTCCGGCCACTACGATTCTCACCAGCCGATGTACACCTCAACCGCTTCTTCTTCCCCATCTCCTTCTCCCCATCCCATGTATTCACATTCAATGTACCCCAGAATCGGTCAACAAGCTCCTTCATCAACCCCTCCGGTGGCCCGTCTCTCATCCCATCATTATTCTTCTTCTCCATCCCCATCACCTTCTTCTTCGTCAGGATTGGGCATCAGGGTTACTATTAAACCGGAATATCGAATTACTCCTCCGCCTCAATTATCTCCACAAGTTGGAGATATTCCTCGGAGCAATTTCCAATTTGATTTTGAGTTTGAGAAAAAGGTTTTAGCTGAAGCAGAGAAAGAAGCTCCAAATTGGAATCGGTTTGGGTTGGAACATCCTCCTCCTAAACCAGTGGAGTCCACATCTTCAATGGGTTCAATTGGAGATCCAGTTGTGAGCAAGTATGTTGCATCTGGCTTGAATCGGGAAGCTGTTTCATTTGCAGTTGCTAACTATGGAGACAATCCAACCAAGGTAATTATGAATTATTGGTGCAGTGACACCCTAGGGAAATGGGATATGATCTCATTGTAA

Protein sequence

MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSHHYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEAEKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYGDNPTKVIMNYWCSDTLGKWDMISL
Homology
[Close]
BLAST of Cucsat.G21280 vs. NCBI nr
Match: XP_004145917.1 (uncharacterized protein LOC101219735 [Cucumis sativus] >KGN49892.1 hypothetical protein Csa_000135 [Cucumis sativus])

HSP 1 Score: 291 bits (744), Expect = 7.83e-98
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60
           MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120
           HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA
Sbjct: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120

Query: 121 EKEAPNWNRFGLEHPPPKPVESTSSM 146
           EKEAPNWNRFGLEHPPPKPVESTSSM
Sbjct: 121 EKEAPNWNRFGLEHPPPKPVESTSSM 146

[Close]
BLAST of Cucsat.G21280 vs. NCBI nr
Match: XP_008437563.1 (PREDICTED: uncharacterized protein LOC103482940 isoform X2 [Cucumis melo])

HSP 1 Score: 264 bits (675), Expect = 2.34e-87
Identity = 137/146 (93.84%), Postives = 139/146 (95.21%), Query Frame = 0 

Query: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60
           MAYDFRNNSGHYDSH PMY STASS+PSPSPHPMYS SMYPRIGQQAPSSTPPVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSH-PMYASTASSTPSPSPHPMYSQSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120
           H+SSSPS SPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNF FDFEFEKKVLAEA
Sbjct: 61  HHSSSPSSSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFHFDFEFEKKVLAEA 120

Query: 121 EKEAPNWNRFGLEHPPPKPVESTSSM 146
           EKEAPNWNRFGLE  PPKPVESTSSM
Sbjct: 121 EKEAPNWNRFGLEQLPPKPVESTSSM 145

[Close]
BLAST of Cucsat.G21280 vs. NCBI nr
Match: XP_008437562.1 (PREDICTED: uncharacterized protein LOC103482940 isoform X1 [Cucumis melo])

HSP 1 Score: 264 bits (675), Expect = 2.42e-87
Identity = 137/146 (93.84%), Postives = 139/146 (95.21%), Query Frame = 0 

Query: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60
           MAYDFRNNSGHYDSH PMY STASS+PSPSPHPMYS SMYPRIGQQAPSSTPPVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSH-PMYASTASSTPSPSPHPMYSQSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120
           H+SSSPS SPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNF FDFEFEKKVLAEA
Sbjct: 61  HHSSSPSSSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFHFDFEFEKKVLAEA 120

Query: 121 EKEAPNWNRFGLEHPPPKPVESTSSM 146
           EKEAPNWNRFGLE  PPKPVESTSSM
Sbjct: 121 EKEAPNWNRFGLEQLPPKPVESTSSM 145

[Close]
BLAST of Cucsat.G21280 vs. NCBI nr
Match: XP_008437564.1 (PREDICTED: uncharacterized protein LOC103482940 isoform X3 [Cucumis melo])

HSP 1 Score: 255 bits (652), Expect = 7.42e-84
Identity = 135/146 (92.47%), Postives = 137/146 (93.84%), Query Frame = 0 

Query: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60
           MAYDFRNNSGHYDSH PMY STASS+PSPSPHPMYS SMYPRIGQQAPSSTPPVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSH-PMYASTASSTPSPSPHPMYSQSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120
           H+SSSPS SPSSS  LGIRVTIKPEYRITPPPQLSPQVGDIPRSNF FDFEFEKKVLAEA
Sbjct: 61  HHSSSPSSSPSSSC-LGIRVTIKPEYRITPPPQLSPQVGDIPRSNFHFDFEFEKKVLAEA 120

Query: 121 EKEAPNWNRFGLEHPPPKPVESTSSM 146
           EKEAPNWNRFGLE  PPKPVESTSSM
Sbjct: 121 EKEAPNWNRFGLEQLPPKPVESTSSM 144

[Close]
BLAST of Cucsat.G21280 vs. NCBI nr
Match: XP_038874870.1 (uncharacterized protein LOC120067367 [Benincasa hispida])

HSP 1 Score: 251 bits (641), Expect = 4.13e-82
Identity = 129/147 (87.76%), Postives = 135/147 (91.84%), Query Frame = 0 

Query: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60
           MAYD+RN  GHYD+H PMY  TASSSPSPSPHPMYS SMYPRIGQQAPS+T PVARLSSH
Sbjct: 1   MAYDYRNKPGHYDAHPPMYGPTASSSPSPSPHPMYSQSMYPRIGQQAPSTTTPVARLSSH 60

Query: 61  HYSSSPSPSPS--SSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLA 120
           H+SSSPSPSPS  SSSGLGIRVTIKPEYRITPPPQLSPQ+GDIPRSNFQFDFEFEKKVLA
Sbjct: 61  HHSSSPSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQIGDIPRSNFQFDFEFEKKVLA 120

Query: 121 EAEKEAPNWNRFGLEHPPPKPVESTSS 145
           EAEKE PNWNRFGLEH P KPVEST+S
Sbjct: 121 EAEKETPNWNRFGLEHLPSKPVESTTS 147

[Close]
BLAST of Cucsat.G21280 vs. ExPASy TrEMBL
Match: A0A0A0KNB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139700 PE=4 SV=1)

HSP 1 Score: 291 bits (744), Expect = 3.79e-98
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60
           MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120
           HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA
Sbjct: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120

Query: 121 EKEAPNWNRFGLEHPPPKPVESTSSM 146
           EKEAPNWNRFGLEHPPPKPVESTSSM
Sbjct: 121 EKEAPNWNRFGLEHPPPKPVESTSSM 146

[Close]
BLAST of Cucsat.G21280 vs. ExPASy TrEMBL
Match: A0A1S3AUC1 (uncharacterized protein LOC103482940 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482940 PE=4 SV=1)

HSP 1 Score: 264 bits (675), Expect = 1.13e-87
Identity = 137/146 (93.84%), Postives = 139/146 (95.21%), Query Frame = 0 

Query: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60
           MAYDFRNNSGHYDSH PMY STASS+PSPSPHPMYS SMYPRIGQQAPSSTPPVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSH-PMYASTASSTPSPSPHPMYSQSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120
           H+SSSPS SPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNF FDFEFEKKVLAEA
Sbjct: 61  HHSSSPSSSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFHFDFEFEKKVLAEA 120

Query: 121 EKEAPNWNRFGLEHPPPKPVESTSSM 146
           EKEAPNWNRFGLE  PPKPVESTSSM
Sbjct: 121 EKEAPNWNRFGLEQLPPKPVESTSSM 145

[Close]
BLAST of Cucsat.G21280 vs. ExPASy TrEMBL
Match: A0A1S3AUG0 (uncharacterized protein LOC103482940 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482940 PE=4 SV=1)

HSP 1 Score: 264 bits (675), Expect = 1.17e-87
Identity = 137/146 (93.84%), Postives = 139/146 (95.21%), Query Frame = 0 

Query: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60
           MAYDFRNNSGHYDSH PMY STASS+PSPSPHPMYS SMYPRIGQQAPSSTPPVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSH-PMYASTASSTPSPSPHPMYSQSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120
           H+SSSPS SPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNF FDFEFEKKVLAEA
Sbjct: 61  HHSSSPSSSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFHFDFEFEKKVLAEA 120

Query: 121 EKEAPNWNRFGLEHPPPKPVESTSSM 146
           EKEAPNWNRFGLE  PPKPVESTSSM
Sbjct: 121 EKEAPNWNRFGLEQLPPKPVESTSSM 145

[Close]
BLAST of Cucsat.G21280 vs. ExPASy TrEMBL
Match: A0A1S3AUY5 (uncharacterized protein LOC103482940 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103482940 PE=4 SV=1)

HSP 1 Score: 255 bits (652), Expect = 3.59e-84
Identity = 135/146 (92.47%), Postives = 137/146 (93.84%), Query Frame = 0 

Query: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60
           MAYDFRNNSGHYDSH PMY STASS+PSPSPHPMYS SMYPRIGQQAPSSTPPVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSH-PMYASTASSTPSPSPHPMYSQSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120
           H+SSSPS SPSSS  LGIRVTIKPEYRITPPPQLSPQVGDIPRSNF FDFEFEKKVLAEA
Sbjct: 61  HHSSSPSSSPSSSC-LGIRVTIKPEYRITPPPQLSPQVGDIPRSNFHFDFEFEKKVLAEA 120

Query: 121 EKEAPNWNRFGLEHPPPKPVESTSSM 146
           EKEAPNWNRFGLE  PPKPVESTSSM
Sbjct: 121 EKEAPNWNRFGLEQLPPKPVESTSSM 144

[Close]
BLAST of Cucsat.G21280 vs. ExPASy TrEMBL
Match: A0A6J1H2H7 (uncharacterized protein LOC111459499 OS=Cucurbita moschata OX=3662 GN=LOC111459499 PE=4 SV=1)

HSP 1 Score: 234 bits (598), Expect = 6.70e-76
Identity = 121/148 (81.76%), Postives = 131/148 (88.51%), Query Frame = 0 

Query: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60
           MAYD+RN  G+Y++H PMY   ASSSPSPS HPMY+ SMYPRIGQQ  S  PPVAR+SSH
Sbjct: 1   MAYDYRNKPGYYNAHPPMYGPAASSSPSPSIHPMYTQSMYPRIGQQGHSPAPPVARVSSH 60

Query: 61  HYSSSPSPSPSS--SSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLA 120
           H+SSS +PSPSS  SSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLA
Sbjct: 61  HHSSSAAPSPSSPSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLA 120

Query: 121 EAEKEAPNWNRFGLEHPPPKPVESTSSM 146
           EAEKE PNWNRFGLEHPP +PVES+SSM
Sbjct: 121 EAEKETPNWNRFGLEHPPSRPVESSSSM 148

The following BLAST results are available for this feature:
BLAST of Cucsat.G21280 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G21280 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004145917.17.83e-98100.00uncharacterized protein LOC101219735 [Cucumis sativus] >KGN49892.1 hypothetical ... [more]
XP_008437563.12.34e-8793.84PREDICTED: uncharacterized protein LOC103482940 isoform X2 [Cucumis melo][more]
XP_008437562.12.42e-8793.84PREDICTED: uncharacterized protein LOC103482940 isoform X1 [Cucumis melo][more]
XP_008437564.17.42e-8492.47PREDICTED: uncharacterized protein LOC103482940 isoform X3 [Cucumis melo][more]
XP_038874870.14.13e-8287.76uncharacterized protein LOC120067367 [Benincasa hispida][more]
BLAST of Cucsat.G21280 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNB83.79e-98100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139700 PE=4 SV=1[more]
A0A1S3AUC11.13e-8793.84uncharacterized protein LOC103482940 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3AUG01.17e-8793.84uncharacterized protein LOC103482940 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3AUY53.59e-8492.47uncharacterized protein LOC103482940 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1H2H76.70e-7681.76uncharacterized protein LOC111459499 OS=Cucurbita moschata OX=3662 GN=LOC1114594... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042575Ubiquitin-associated protein 1, C-terminalGENE3D1.20.120.1920UBAP1 SOUBA domaincoord: 151..221
e-value: 1.2E-6
score: 30.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..146
NoneNo IPR availablePANTHERPTHR15960:SF7SUBFAMILY NOT NAMEDcoord: 1..220
IPR038870Ubiquitin-associated protein 1PANTHERPTHR15960LD44032Pcoord: 1..220
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 166..220

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G21280.T4Cucsat.G21280.T4mRNA
Cucsat.G21280.T3Cucsat.G21280.T3mRNA
Cucsat.G21280.T1Cucsat.G21280.T1mRNA
Cucsat.G21280.T9Cucsat.G21280.T9mRNA
Cucsat.G21280.T11Cucsat.G21280.T11mRNA
Cucsat.G21280.T10Cucsat.G21280.T10mRNA
Cucsat.G21280.T7Cucsat.G21280.T7mRNA
Cucsat.G21280.T5Cucsat.G21280.T5mRNA
Cucsat.G21280.T6Cucsat.G21280.T6mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
cellular_component GO:0000813 ESCRT I complex
molecular_function GO:0043130 ubiquitin binding
molecular_function GO:0005515 protein binding