Cucsat.G21252 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G21252
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	small heat shock protein, chloroplastic
Location	ctg910: 31859 .. 34282 (+)
RNA-Seq Expression	Cucsat.G21252
Synteny	Cucsat.G21252

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAGATGTGTTTTTGTTTGGAAACGGTAGTAGATTATAGTTATATTTAATTCCAACAAATTCGGATCGAATAGATGTTTAAAAGGAGAGCCATATTTACAAAACCAAAATCTACAAAACAATCGACGGTAGAAAAATCTTGGTGTCCTTGCTCGTGTCCCACCCAATCCATGATGATAAACTGGTTTGAATCAAGCTTCTTATTTCTGTCATTTCCGTAGACCTTTCAAGAATCACTGAGAAGTTCTACCAGTAATAGTCTGGAGTATAACAAGTGACAAGTGTAGAATCTAGAATGAACTTCCAAAACACTCGAGACTCATCTTCATTCTTCTTCTCTTCTCATTTCTCTATAAATGTCTCCTTCATCTTCTCCATAACACCATATCAAAGAACCAAAAGCTAATTACAAATCTGAGTCTCTGACAATAGCCATGGCTTCAACTCTTTCCTCTTCTCCTTCACTTCTGTTGTCCTTCAAACCCAGACCCCTCAAGAAAATCCCTCCGCCACGAGTCACGGTCCTGCCTTTGAGGGTGAGAGCTGAGGCTGGAGCCAGCAGCGGCAACAGCAAAGATACATCTTTGGAGGTTCATGTCAATCCAAGTAGCCAGGGCCAGGGAACGTCCGTGGAAAGACGGCCGGGGTCCAAGCGGCTAGCCCTGGACATTTCACCTTATGGTAAGTTCTTTTAATTTTAATATCGAGGAACGGCTCTAAATATAACAATTAAAGTATTAATAGATTTAGTCCAATATAAAAAAAAAAAAAAAAAACTTACGAGCTCAGCAAACTTCAGATACAACACTAGATCGCTAATAGGAGTCATAGGTTTATCTTGCCATATTTACCCTTCTTTTAAAAATGTTGCTCGCCTCATAAGTCATTCCCGTTTATGAGAATGTTAGGTGAAGTGAGATTCAATTACCGTTTTGCAGGAATTCTAGACCCTCTGTCTCCAATGAGGACGATGAGGCAATTGCTGGAGACAGTGGACAGGTTATTCGATGACGCAGTAATGATGACGCCAGGATTGAGATGGAACAGGGGTGGGGTCCGAGCTCCTTGGGACATTGAAGAGCACGAAAACGAAATCAGGATGCGCTTTGACATGCCTGGCCTCTCCAAGGAATATGTCAAGGTTTCTGTTGAAGACAATTTTTTGATTATAAAAGGCGGCCATGAGGCTGAGACCTCCAACACCAGCAGCAATGATGACGGCTGGTCCACAAGGAATGCCTCTGCCTACCACACCCGCCTCCAACTTCCTGATGGCGTTGACAAAGACAACATCAAGGCTCAGCTTACCAATGGCGTTCTTTACATTACACTTCCCAAAATCAAAGTCCAACGCAAGGTCATGGATATAGAGATCCAGTAACTAACTGTTTGAAATTCAAAATCCCAGCGCTAGTTTTTGGTTTTTTTTTGTGAGATTCCTACTTTTAGCTCTCTTCAATCTGATGTGTATATATACATATATTATTCAATAATGGCAAATTATGTCTCTCTTAACTGCTCTGACTGTTGCTGAATTTGTTCTACAAATCCAACATCACAAGGACTGTTTAGTGGAAAGAAAACTTGACCTTTACAAGTATACACATTCATTGGATGTTTCAGTTACTCTAGGCTTCATTTCCTTCGGGAATGGCTGCCAGTGCTGGCTTCCAAGTTGAAGAAGATTCAAGATTACTATACAACGTGGTGTGCTGAAGCTGGTGCATAATTAGGTCTTCAATTGACACTTGTTTGGCCAGTAAGTGTTGCAGTTCTTTCTTTGTTAAAACGATTCTGACTCTCCTTGTGCTTCTGCTTTTGTGCGAATCTTGGATGAAGGAATGAGGTGGAGGAAGGGCCGTGGGTTGGGGAGAAGGAAGCATGTAATAAACTTGACCCATCTTCAACTCGAATTCGGGAGACAGATGGTGATGGTGAGAGACATCCTGTGAGGATCCAATCACAAAGCCAGTGAAATTGACCAACACATCTTTAACTAGAGTTGGCGTGGTGAACTCCAACACCTTCCCGTCTGACTTAACAATCTTCAAAGCTTCCCCGTGATTCTGCTTGTGCGCTGCGTCAACTTTAAGACAACAAGGGAATTTGATTGTGTAGGAAACACAGCAGGAGTTGCCCATTTTGATTCCTTCAAGACTCGAATCAAGAGAGAGGCAGTTTTAGGCAAATTGTTTTAAACATCGGGGAGGAGCCGTAGGGAAAGTATCATTCTCATCCTCATGCTCATGCATGAACCCATGAAGAAGAAGATGAAAGAGGCAAATTCGGGTAGCCCTTCCTTCAGTTGGAAAACCAAAGTTACCGGGGTGCTAAATACATACAAATAGGAGAGCTTGAAATGGTCAACAAGCGTGCAGAAAGAAAAAGGCATGGTGGGGGCAGCTTCGCCTTTCTGTTCCTGCT

Coding sequence (CDS)

ATGGCTTCAACTCTTTCCTCTTCTCCTTCACTTCTGTTGTCCTTCAAACCCAGACCCCTCAAGAAAATCCCTCCGCCACGAGTCACGGTCCTGCCTTTGAGGGTGAGAGCTGAGGCTGGAGCCAGCAGCGGCAACAGCAAAGATACATCTTTGGAGGTTCATGTCAATCCAAGTAGCCAGGGCCAGGGAACGTCCGTGGAAAGACGGCCGGGGTCCAAGCGGCTAGCCCTGGACATTTCACCTTATGGAATTCTAGACCCTCTGTCTCCAATGAGGACGATGAGGCAATTGCTGGAGACAGTGGACAGGTTATTCGATGACGCAGTAATGATGACGCCAGGATTGAGATGGAACAGGGGTGGGGTCCGAGCTCCTTGGGACATTGAAGAGCACGAAAACGAAATCAGGATGCGCTTTGACATGCCTGGCCTCTCCAAGGAATATGTCAAGGTTTCTGTTGAAGACAATTTTTTGATTATAAAAGGCGGCCATGAGGCTGAGACCTCCAACACCAGCAGCAATGATGACGGCTGGTCCACAAGGAATGCCTCTGCCTACCACACCCGCCTCCAACTTCCTGATGGCGTTGACAAAGACAACATCAAGGCTCAGCTTACCAATGGCGTTCTTTACATTACACTTCCCAAAATCAAAGTCCAACGCAAGGTCATGGATATAGAGATCCAGTAA

Protein sequence

MASTLSSSPSLLLSFKPRPLKKIPPPRVTVLPLRVRAEAGASSGNSKDTSLEVHVNPSSQGQGTSVERRPGSKRLALDISPYGILDPLSPMRTMRQLLETVDRLFDDAVMMTPGLRWNRGGVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWSTRNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ

Homology

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BLAST of Cucsat.G21252 vs. ExPASy Swiss-Prot
Match: P30222 (Small heat shock protein, chloroplastic OS=Petunia hybrida OX=4102 GN=HSP22 PE=2 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.4e-57
Identity = 117/193 (60.62%), Postives = 155/193 (80.31%), Query Frame = 0


Query: 42  SSGNSKDTSLEVHVNPSSQG---QGTSVERRPGSKRLALDISPYGILDPLSPMRTMRQLL 101
           ++G++KDTS++VHV+ ++QG   QG++VERRP  +R+ALD+SP+G+LDP+SPMRTMRQ++
Sbjct: 57  ATGDNKDTSVDVHVSNNNQGGNNQGSAVERRP--RRMALDVSPFGLLDPMSPMRTMRQMM 116

Query: 102 ETVDRLFDDAVMMTPGLRWNR--GGVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDN 161
           +T+DRLF+D  M  PG R NR  G +RAPWDI++ ENEI+MRFDMPGLSKE VKVSVED+
Sbjct: 117 DTMDRLFED-TMTFPGSR-NRGTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDD 176

Query: 162 FLIIKGGHEAETSNTSSNDDGWSTRNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPK 221
            L+IKG H+ E    S  DD W  RN S+Y TRL LPD VDKD +KA+L NGVL I++PK
Sbjct: 177 VLVIKGEHKKE---ESGKDDSWG-RNYSSYDTRLSLPDNVDKDKVKAELKNGVLLISIPK 236

Query: 222 IKVQRKVMDIEIQ 230
            KV++KV D+EI+
Sbjct: 237 TKVEKKVTDVEIK 241

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BLAST of Cucsat.G21252 vs. ExPASy Swiss-Prot
Match: P09887 (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max OX=3847 GN=HSP22 PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 8.4e-56
Identity = 109/186 (58.60%), Postives = 147/186 (79.03%), Query Frame = 0


Query: 44  GNSKDTSLEVHVNPSSQGQGTSVERRPGSKRLALDISPYGILDPLSPMRTMRQLLETVDR 103
           G++KD S+EV  + S   QGT+VE++P  +R A+DISP+GILDP SPMR+MRQ+L+T+DR
Sbjct: 2   GDNKDNSVEVQ-HVSKGDQGTAVEKKP--RRTAMDISPFGILDPWSPMRSMRQILDTMDR 61

Query: 104 LFDDAVMMTPGLRWNRGGVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGG 163
           +F+D  M  PG     G +RAPWDI++ E+EIRMRFDMPGL+KE VKVSVED+ L+IKGG
Sbjct: 62  VFED-TMTFPGRNIGGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGG 121

Query: 164 HEAETSNTSSNDDGWSTRNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPKIKVQRKV 223
           H++E  +    DD WS+R  S+Y TRL+LPD  +KD +KA+L NGVLYIT+PK KV+RKV
Sbjct: 122 HKSEQEH--GGDDSWSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVLYITIPKTKVERKV 181

Query: 224 MDIEIQ 230
           +D+++Q
Sbjct: 182 IDVQVQ 181

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BLAST of Cucsat.G21252 vs. ExPASy Swiss-Prot
Match: P31170 (Heat shock protein 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP21 PE=1 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.2e-54
Identity = 127/242 (52.48%), Postives = 168/242 (69.42%), Query Frame = 0


Query: 1   MASTLSSSPSLLLS-FKPRP---LKKIPPPRVTV---LPLRVRAEAGASSGNSKDTSLEV 60
           MASTLS + S L S   P P    K   P  V+    +P R+RA+      + ++ S++V
Sbjct: 1   MASTLSFAASALCSPLAPSPSVSSKSATPFSVSFPRKIPSRIRAQ------DQRENSIDV 60

Query: 61  HVNPSSQG-QGTSVERRPGSKRLALDISPYGILDPLSPMRTMRQLLETVDRLFDDAVMMT 120
                 +G QG+SVE+RP  +RL +D+SP+G+LDPLSPMRTMRQ+L+T+DR+F+D +   
Sbjct: 61  VQQGQQKGNQGSSVEKRP-QQRLTMDVSPFGLLDPLSPMRTMRQMLDTMDRMFEDTM--- 120

Query: 121 PGLRWNRGG-----VRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAE 180
           P    NRGG     +RAPWDI+E E+EI+MRFDMPGLSKE VK+SVEDN L+IKG  + E
Sbjct: 121 PVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKE 180

Query: 181 TSNTSSNDDGWSTRNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPKIKVQRKVMDIE 230
            S     DD WS R+ S+Y TRLQLPD  +KD IKA+L NGVL+IT+PK KV+RKV+D++
Sbjct: 181 DS-----DDSWSGRSVSSYGTRLQLPDNCEKDKIKAELKNGVLFITIPKTKVERKVIDVQ 227

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BLAST of Cucsat.G21252 vs. ExPASy Swiss-Prot
Match: P09886 (Small heat shock protein, chloroplastic OS=Pisum sativum OX=3888 GN=HSP21 PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.7e-54
Identity = 117/236 (49.58%), Postives = 165/236 (69.92%), Query Frame = 0


Query: 4   TLSSSPSLLLSFKPRPLKKIPPPRVTVLPLR----------VRAEAGASSGNSKDTSLEV 63
           +LS+  S +LS KP    K  PP +   PLR          VRA+AG   G++KD S+EV
Sbjct: 6   SLSTIASPILSQKPGSSVKSTPPCMASFPLRRQLPRLGLRNVRAQAG-GDGDNKDNSVEV 65

Query: 64  HVNPSSQGQGTSVERRPGSKRLALDISPYGILDPLSPMRTMRQLLETVDRLFDDAVMMTP 123
           H   +   QGT+VER+P  +R ++DISP+G+LDP SPMR+MRQ+L+T+DR+F+DA+ + P
Sbjct: 66  H-RVNKDDQGTAVERKP--RRSSIDISPFGLLDPWSPMRSMRQMLDTMDRIFEDAITI-P 125

Query: 124 GLRWNRGGVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSS 183
           G     G +R PW+I++ E+EIRMRFDMPG+SKE VKVSVED+ L+IK  H  E    + 
Sbjct: 126 GRNIGGGEIRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREE----NG 185

Query: 184 NDDGWSTRNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 230
            +D WS ++ S Y TRL+LPD  +K+ +KA+L +GVLYIT+PK K++R V+D++IQ
Sbjct: 186 GEDCWSRKSYSCYDTRLKLPDNCEKEKVKAELKDGVLYITIPKTKIERTVIDVQIQ 232

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BLAST of Cucsat.G21252 vs. ExPASy Swiss-Prot
Match: Q95661 (Small heat shock protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=HSP21 PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.8e-51
Identity = 108/192 (56.25%), Postives = 146/192 (76.04%), Query Frame = 0


Query: 42  SSGNSKDTSLEVHVNPSSQG---QGTSVERRPGSKRLALDISPYGILDPLSPMRTMRQLL 101
           ++G++KDTS++VH + S+QG   QGT+VERRP   R+ALD+SP+G+LDP+SPMRTMRQ++
Sbjct: 50  ATGDNKDTSVDVH-HSSAQGGNNQGTAVERRP--TRMALDVSPFGVLDPMSPMRTMRQMI 109

Query: 102 ETVDRLFDDAVMMTPGLR--WNRGGVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDN 161
           +T+DRLF+D  M  PG       G +R PWDI + ENEI+MRFDMPGLSKE VKVSVE++
Sbjct: 110 DTMDRLFED-TMTFPGRNRASGTGEIRTPWDIHDDENEIKMRFDMPGLSKEDVKVSVEND 169

Query: 162 FLIIKGGHEAETSNTSSNDDGWSTRNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPK 221
            L+IKG H+ E      +  G   RN S+Y TRL LPD V KD IKA+L NGVL+I++PK
Sbjct: 170 MLVIKGEHKKEEDGRDKHSWG---RNYSSYDTRLSLPDNVVKDKIKAELKNGVLFISIPK 229

Query: 222 IKVQRKVMDIEI 229
            +V++KV+D++I
Sbjct: 230 TEVEKKVIDVQI 234

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BLAST of Cucsat.G21252 vs. NCBI nr
Match: XP_004145960.1 (small heat shock protein, chloroplastic [Cucumis sativus] >KGN49816.1 hypothetical protein Csa_000495 [Cucumis sativus])

HSP 1 Score: 452 bits (1162), Expect = 4.43e-160
Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MASTLSSSPSLLLSFKPRPLKKIPPPRVTVLPLRVRAEAGASSGNSKDTSLEVHVNPSSQ 60
           MASTLSSSPSLLLSFKPRPLKKIPPPRVTVLPLRVRAEAGASSGNSKDTSLEVHVNPSSQ
Sbjct: 1   MASTLSSSPSLLLSFKPRPLKKIPPPRVTVLPLRVRAEAGASSGNSKDTSLEVHVNPSSQ 60

Query: 61  GQGTSVERRPGSKRLALDISPYGILDPLSPMRTMRQLLETVDRLFDDAVMMTPGLRWNRG 120
           GQGTSVERRPGSKRLALDISPYGILDPLSPMRTMRQ+LETVDRLFDDAVMMTPGLRWNRG
Sbjct: 61  GQGTSVERRPGSKRLALDISPYGILDPLSPMRTMRQMLETVDRLFDDAVMMTPGLRWNRG 120

Query: 121 GVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWST 180
           GVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWST
Sbjct: 121 GVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWST 180

Query: 181 RNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 229
           RNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ
Sbjct: 181 RNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 229

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BLAST of Cucsat.G21252 vs. NCBI nr
Match: XP_008437664.1 (PREDICTED: small heat shock protein, chloroplastic [Cucumis melo])

HSP 1 Score: 430 bits (1105), Expect = 2.17e-151
Identity = 218/229 (95.20%), Postives = 221/229 (96.51%), Query Frame = 0


Query: 1   MASTLSSSPSLLLSFKPRPLKKIPPPRVTVLPLRVRAEAGASSGNSKDTSLEVHVNPSSQ 60
           MASTLS SPS LLSFKPRPLKKIP PRVTVLPLRVRAEAGAS  NSKDTSLEVHVNPS Q
Sbjct: 1   MASTLSYSPSPLLSFKPRPLKKIPLPRVTVLPLRVRAEAGASGDNSKDTSLEVHVNPSGQ 60

Query: 61  GQGTSVERRPGSKRLALDISPYGILDPLSPMRTMRQLLETVDRLFDDAVMMTPGLRWNRG 120
           GQGTSVERRPG KRLALDISPYGILDPLSPMRTMRQ+LETVDRLFDDAVMM+PGLRWNRG
Sbjct: 61  GQGTSVERRPGPKRLALDISPYGILDPLSPMRTMRQMLETVDRLFDDAVMMSPGLRWNRG 120

Query: 121 GVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWST 180
           GVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWS 
Sbjct: 121 GVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWSA 180

Query: 181 RNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 229
           RNASAYHTRLQLPDGVDKD+IKAQLTNGVLYITLPKIKVQRKVMDIEIQ
Sbjct: 181 RNASAYHTRLQLPDGVDKDSIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 229

[Close]

BLAST of Cucsat.G21252 vs. NCBI nr
Match: KAA0042511.1 (small heat shock protein [Cucumis melo var. makuwa] >TYK05913.1 small heat shock protein [Cucumis melo var. makuwa])

HSP 1 Score: 414 bits (1065), Expect = 6.42e-145
Identity = 217/253 (85.77%), Postives = 220/253 (86.96%), Query Frame = 0


Query: 1   MASTLSSSPSLLLSFKPRPLKKIPPPRVTVLPLRVRAEAGASSGNSKDTSLEVHVNPSSQ 60
           MASTLS SPS LLSFKPRPLKKIP PRVTVLPLRVRAEAGAS  NSKDTSLEVHVNPS Q
Sbjct: 1   MASTLSYSPSPLLSFKPRPLKKIPLPRVTVLPLRVRAEAGASGDNSKDTSLEVHVNPSGQ 60

Query: 61  GQGTSVERRPGSKRLALDISPY------------------------GILDPLSPMRTMRQ 120
           GQGTSVERRPG KRLALDISPY                        GILDPLSPMRTMRQ
Sbjct: 61  GQGTSVERRPGPKRLALDISPYANFRYNTRSLTGVIGEVRFNYRFAGILDPLSPMRTMRQ 120

Query: 121 LLETVDRLFDDAVMMTPGLRWNRGGVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDN 180
           +LETVDRLFDDAVMM+PGLRWNRGGVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDN
Sbjct: 121 MLETVDRLFDDAVMMSPGLRWNRGGVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDN 180

Query: 181 FLIIKGGHEAETSNTSSNDDGWSTRNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPK 229
           FLIIKGGHEAETSNTSSNDDGWS RNASAYHTRLQLPDGVDKD+IKAQLTNGVLYITLPK
Sbjct: 181 FLIIKGGHEAETSNTSSNDDGWSARNASAYHTRLQLPDGVDKDSIKAQLTNGVLYITLPK 240

[Close]

BLAST of Cucsat.G21252 vs. NCBI nr
Match: XP_038875982.1 (small heat shock protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 406 bits (1044), Expect = 4.31e-142
Identity = 203/229 (88.65%), Postives = 216/229 (94.32%), Query Frame = 0


Query: 1   MASTLSSSPSLLLSFKPRPLKKIPPPRVTVLPLRVRAEAGASSGNSKDTSLEVHVNPSSQ 60
           MASTLSSSPS LLSFKPRPLKK PP RVTVLP RV+AEAGA S ++KD SLEVHVNPS Q
Sbjct: 1   MASTLSSSPSPLLSFKPRPLKKTPPARVTVLPPRVKAEAGAGSDHNKDASLEVHVNPSGQ 60

Query: 61  GQGTSVERRPGSKRLALDISPYGILDPLSPMRTMRQLLETVDRLFDDAVMMTPGLRWNRG 120
           GQGTSVERRPG KRLALD+SPYGILDPLSPMRTMRQ+L+TVDRLFDDAVMMTPG RW+RG
Sbjct: 61  GQGTSVERRPGPKRLALDVSPYGILDPLSPMRTMRQMLDTVDRLFDDAVMMTPGWRWSRG 120

Query: 121 GVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWST 180
            VRAPWDIEEHENEIRMRFDMPGL+KE+ KVSVED+FLIIKGGHE ET+N+SSNDDGWST
Sbjct: 121 EVRAPWDIEEHENEIRMRFDMPGLTKEHAKVSVEDDFLIIKGGHETETTNSSSNDDGWST 180

Query: 181 RNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 229
           RNASAYHTRLQLPDGVDKDNIKAQL+NGVLYITLPKIKVQRKVMDIEIQ
Sbjct: 181 RNASAYHTRLQLPDGVDKDNIKAQLSNGVLYITLPKIKVQRKVMDIEIQ 229

[Close]

BLAST of Cucsat.G21252 vs. NCBI nr
Match: ADU55784.1 (HSP25.5 [Citrullus lanatus])

HSP 1 Score: 401 bits (1031), Expect = 3.84e-140
Identity = 203/229 (88.65%), Postives = 215/229 (93.89%), Query Frame = 0


Query: 1   MASTLSSSPSLLLSFKPRPLKKIPPPRVTVLPLRVRAEAGASSGNSKDTSLEVHVNPSSQ 60
           MASTLSSSPS LLSFKPRPLKK PP RVTVLPLRVRAEAGA   ++KDTSLEVHVNPS+Q
Sbjct: 1   MASTLSSSPSPLLSFKPRPLKKTPPARVTVLPLRVRAEAGAGGDHNKDTSLEVHVNPSAQ 60

Query: 61  GQGTSVERRPGSKRLALDISPYGILDPLSPMRTMRQLLETVDRLFDDAVMMTPGLRWNRG 120
           G  TSVERRPG KRLALD+SPYGILDPLSPMRTMRQ+L+TVDRLFDDAVMM PG RW+RG
Sbjct: 61  G--TSVERRPGPKRLALDVSPYGILDPLSPMRTMRQMLDTVDRLFDDAVMMRPGWRWSRG 120

Query: 121 GVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWST 180
            VRAPWDIEEHENEIRMRFDMPGLSKE+VKVSVED+FLIIKGGHE ET+NTSSNDDGWST
Sbjct: 121 EVRAPWDIEEHENEIRMRFDMPGLSKEHVKVSVEDHFLIIKGGHETETTNTSSNDDGWST 180

Query: 181 RNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 229
           RNASAYHTRLQLP+G+D DNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ
Sbjct: 181 RNASAYHTRLQLPEGIDTDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 227

[Close]

BLAST of Cucsat.G21252 vs. ExPASy TrEMBL
Match: A0A0A0KQ14 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G138480 PE=3 SV=1)

HSP 1 Score: 452 bits (1162), Expect = 2.14e-160
Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MASTLSSSPSLLLSFKPRPLKKIPPPRVTVLPLRVRAEAGASSGNSKDTSLEVHVNPSSQ 60
           MASTLSSSPSLLLSFKPRPLKKIPPPRVTVLPLRVRAEAGASSGNSKDTSLEVHVNPSSQ
Sbjct: 1   MASTLSSSPSLLLSFKPRPLKKIPPPRVTVLPLRVRAEAGASSGNSKDTSLEVHVNPSSQ 60

Query: 61  GQGTSVERRPGSKRLALDISPYGILDPLSPMRTMRQLLETVDRLFDDAVMMTPGLRWNRG 120
           GQGTSVERRPGSKRLALDISPYGILDPLSPMRTMRQ+LETVDRLFDDAVMMTPGLRWNRG
Sbjct: 61  GQGTSVERRPGSKRLALDISPYGILDPLSPMRTMRQMLETVDRLFDDAVMMTPGLRWNRG 120

Query: 121 GVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWST 180
           GVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWST
Sbjct: 121 GVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWST 180

Query: 181 RNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 229
           RNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ
Sbjct: 181 RNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 229

[Close]

BLAST of Cucsat.G21252 vs. ExPASy TrEMBL
Match: A0A1S3AV56 (small heat shock protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483006 PE=3 SV=1)

HSP 1 Score: 430 bits (1105), Expect = 1.05e-151
Identity = 218/229 (95.20%), Postives = 221/229 (96.51%), Query Frame = 0


Query: 1   MASTLSSSPSLLLSFKPRPLKKIPPPRVTVLPLRVRAEAGASSGNSKDTSLEVHVNPSSQ 60
           MASTLS SPS LLSFKPRPLKKIP PRVTVLPLRVRAEAGAS  NSKDTSLEVHVNPS Q
Sbjct: 1   MASTLSYSPSPLLSFKPRPLKKIPLPRVTVLPLRVRAEAGASGDNSKDTSLEVHVNPSGQ 60

Query: 61  GQGTSVERRPGSKRLALDISPYGILDPLSPMRTMRQLLETVDRLFDDAVMMTPGLRWNRG 120
           GQGTSVERRPG KRLALDISPYGILDPLSPMRTMRQ+LETVDRLFDDAVMM+PGLRWNRG
Sbjct: 61  GQGTSVERRPGPKRLALDISPYGILDPLSPMRTMRQMLETVDRLFDDAVMMSPGLRWNRG 120

Query: 121 GVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWST 180
           GVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWS 
Sbjct: 121 GVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWSA 180

Query: 181 RNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 229
           RNASAYHTRLQLPDGVDKD+IKAQLTNGVLYITLPKIKVQRKVMDIEIQ
Sbjct: 181 RNASAYHTRLQLPDGVDKDSIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 229

[Close]

BLAST of Cucsat.G21252 vs. ExPASy TrEMBL
Match: A0A5A7TLQ6 (Small heat shock protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00030 PE=3 SV=1)

HSP 1 Score: 414 bits (1065), Expect = 3.11e-145
Identity = 217/253 (85.77%), Postives = 220/253 (86.96%), Query Frame = 0


Query: 1   MASTLSSSPSLLLSFKPRPLKKIPPPRVTVLPLRVRAEAGASSGNSKDTSLEVHVNPSSQ 60
           MASTLS SPS LLSFKPRPLKKIP PRVTVLPLRVRAEAGAS  NSKDTSLEVHVNPS Q
Sbjct: 1   MASTLSYSPSPLLSFKPRPLKKIPLPRVTVLPLRVRAEAGASGDNSKDTSLEVHVNPSGQ 60

Query: 61  GQGTSVERRPGSKRLALDISPY------------------------GILDPLSPMRTMRQ 120
           GQGTSVERRPG KRLALDISPY                        GILDPLSPMRTMRQ
Sbjct: 61  GQGTSVERRPGPKRLALDISPYANFRYNTRSLTGVIGEVRFNYRFAGILDPLSPMRTMRQ 120

Query: 121 LLETVDRLFDDAVMMTPGLRWNRGGVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDN 180
           +LETVDRLFDDAVMM+PGLRWNRGGVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDN
Sbjct: 121 MLETVDRLFDDAVMMSPGLRWNRGGVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDN 180

Query: 181 FLIIKGGHEAETSNTSSNDDGWSTRNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPK 229
           FLIIKGGHEAETSNTSSNDDGWS RNASAYHTRLQLPDGVDKD+IKAQLTNGVLYITLPK
Sbjct: 181 FLIIKGGHEAETSNTSSNDDGWSARNASAYHTRLQLPDGVDKDSIKAQLTNGVLYITLPK 240

[Close]

BLAST of Cucsat.G21252 vs. ExPASy TrEMBL
Match: H6TB37 (HSP25.5 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 401 bits (1031), Expect = 1.86e-140
Identity = 203/229 (88.65%), Postives = 215/229 (93.89%), Query Frame = 0


Query: 1   MASTLSSSPSLLLSFKPRPLKKIPPPRVTVLPLRVRAEAGASSGNSKDTSLEVHVNPSSQ 60
           MASTLSSSPS LLSFKPRPLKK PP RVTVLPLRVRAEAGA   ++KDTSLEVHVNPS+Q
Sbjct: 1   MASTLSSSPSPLLSFKPRPLKKTPPARVTVLPLRVRAEAGAGGDHNKDTSLEVHVNPSAQ 60

Query: 61  GQGTSVERRPGSKRLALDISPYGILDPLSPMRTMRQLLETVDRLFDDAVMMTPGLRWNRG 120
           G  TSVERRPG KRLALD+SPYGILDPLSPMRTMRQ+L+TVDRLFDDAVMM PG RW+RG
Sbjct: 61  G--TSVERRPGPKRLALDVSPYGILDPLSPMRTMRQMLDTVDRLFDDAVMMRPGWRWSRG 120

Query: 121 GVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWST 180
            VRAPWDIEEHENEIRMRFDMPGLSKE+VKVSVED+FLIIKGGHE ET+NTSSNDDGWST
Sbjct: 121 EVRAPWDIEEHENEIRMRFDMPGLSKEHVKVSVEDHFLIIKGGHETETTNTSSNDDGWST 180

Query: 181 RNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 229
           RNASAYHTRLQLP+G+D DNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ
Sbjct: 181 RNASAYHTRLQLPEGIDTDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 227

[Close]

BLAST of Cucsat.G21252 vs. ExPASy TrEMBL
Match: A0A6J1IA25 (small heat shock protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111472985 PE=3 SV=1)

HSP 1 Score: 366 bits (939), Expect = 1.80e-126
Identity = 182/229 (79.48%), Postives = 202/229 (88.21%), Query Frame = 0


Query: 1   MASTLSSSPSLLLSFKPRPLKKIPPPRVTVLPLRVRAEAGASSGNSKDTSLEVHVNPSSQ 60
           MASTLSSS S LLSFKPRPLKK PPPR+T LP RVRAEAGA   +SKDTSLEVHVNPS Q
Sbjct: 1   MASTLSSSASPLLSFKPRPLKKAPPPRLTSLPFRVRAEAGAGGDHSKDTSLEVHVNPSGQ 60

Query: 61  GQGTSVERRPGSKRLALDISPYGILDPLSPMRTMRQLLETVDRLFDDAVMMTPGLRWNRG 120
            QGTSVERRPG KRLA+D+SPYGI DPLSPMRTMRQ+L+TVDRLFDDA ++ PG  W+RG
Sbjct: 61  SQGTSVERRPGPKRLAMDVSPYGIFDPLSPMRTMRQMLDTVDRLFDDAAILRPGGMWSRG 120

Query: 121 GVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWST 180
            VRAPWDIEEHENEI+MRFDMPGLSKE+VKVS+EDNFLIIKG HE    +TSS+++GWS 
Sbjct: 121 EVRAPWDIEEHENEIKMRFDMPGLSKEHVKVSIEDNFLIIKGSHE----DTSSHEEGWSA 180

Query: 181 RNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 229
           +NAS YHTRLQLPDG+DKDNIKA+L NGVLYITLPK K+QR VMDIEIQ
Sbjct: 181 KNASDYHTRLQLPDGIDKDNIKAKLNNGVLYITLPKTKIQRNVMDIEIQ 225

The following BLAST results are available for this feature:

BLAST of Cucsat.G21252 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P30222	3.4e-57	60.62	Small heat shock protein, chloroplastic OS=Petunia hybrida OX=4102 GN=HSP22 PE=2...	[more]
P09887	8.4e-56	58.60	Small heat shock protein, chloroplastic (Fragment) OS=Glycine max OX=3847 GN=HSP...	[more]
P31170	1.2e-54	52.48	Heat shock protein 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP21 PE...	[more]
P09886	2.7e-54	49.58	Small heat shock protein, chloroplastic OS=Pisum sativum OX=3888 GN=HSP21 PE=2 S...	[more]
Q95661	4.8e-51	56.25	Small heat shock protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=HSP21...	[more]

BLAST of Cucsat.G21252 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145960.1	4.43e-160	99.56	small heat shock protein, chloroplastic [Cucumis sativus] >KGN49816.1 hypothetic...	[more]
XP_008437664.1	2.17e-151	95.20	PREDICTED: small heat shock protein, chloroplastic [Cucumis melo]	[more]
KAA0042511.1	6.42e-145	85.77	small heat shock protein [Cucumis melo var. makuwa] >TYK05913.1 small heat shock...	[more]
XP_038875982.1	4.31e-142	88.65	small heat shock protein, chloroplastic [Benincasa hispida]	[more]
ADU55784.1	3.84e-140	88.65	HSP25.5 [Citrullus lanatus]	[more]

BLAST of Cucsat.G21252 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQ14	2.14e-160	99.56	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G138480 PE=3 S...	[more]
A0A1S3AV56	1.05e-151	95.20	small heat shock protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483006 ...	[more]
A0A5A7TLQ6	3.11e-145	85.77	Small heat shock protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
H6TB37	1.86e-140	88.65	HSP25.5 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A6J1IA25	1.80e-126	79.48	small heat shock protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111472...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 127..229 e-value: 5.8E-26 score: 90.6
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 117..229 score: 23.937309
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 83..229 e-value: 1.0E-27 score: 98.7
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 93..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..67
None	No IPR available	PANTHER	PTHR46733:SF4	HEAT SHOCK PROTEIN 21, CHLOROPLASTIC	coord: 10..229
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 127..216 e-value: 7.84208E-25 score: 91.8468
IPR044587	Heat shock protein 21-like	PANTHER	PTHR46733	26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL	coord: 10..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G21252.T1	Cucsat.G21252.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009408	response to heat