Cucsat.G21174 (gene) Cucumber (B10) v3

Overview
NameCucsat.G21174
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description60S ribosomal protein L36
Locationctg910: 3047896 .. 3049704 (-)
RNA-Seq ExpressionCucsat.G21174
SyntenyCucsat.G21174
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATTAAACAATTATTGGCATCATATAAATTCTCCTCTAAATCCCAAACCCTAAATTTTCATACTCGGTCGTCAGATTCATCGAAACAGGTGAGAATCCGTTGCTTTTAGAGTCGTTGTTCTTTGGTTAGTTATCAATTTTGCAATCGTTGTTCATTGGTAAGTTCACCTCTGTTAATGGTTTCAGTGATACAGAAAGGGATTTTTTAGGTTAGTTTGTTTGAAACAATTGAATGATTGTGGACCGTTGTGCATTCTGGGATTTTTTTTATTGTACTCGGGAATTTTATGTCTGCAGCTGTACTTTGAATGTGCTTGGTGAAATAAGTTCGGACTTGGCTGGAAATTTGCTTGGTTAATGCTTGATTTAGAGACCCAGTTTTAGTTAGACAGAGTAAACGTTAGGAGATTTATTTTCGTCTTTGCAGAATTAGGGTTTTGCAGTTGAACTTATTTTTGATGGAGTGACTAATTGGGTTTTATTGAAACAGGTAATGGCTCCGAAACAGCCGAATACTGGCCTTTTTGTTGGTCTGAACAAGGGCCACATTGTCACCAAGAAGGAGTTGGCCCCACGGCCCTCAGATCGTAAAGGAGTAAGTCAATCGACATGAAACTAGATGTTTTAAAATTTTCTTTGGTGGTGTTAGTTAGCTGTTTAGGAGATTAAGGAACGAGTTTAGGTTATTTTATTTTATTGGACAATTTCTGAACTGTGGTTACTTACTTTTCATATGTTGCTGAAAAAGTCTTGTTAGATTCTTCATATACGAGCATACAAAATTTAAGATTGTGTTCTCAAATTTCTGTTTTCATACAAATCAATGTAGAAATCAAGTAAAAGAGTCCTCTTTGTCCGGAGTTTGATCCGGGAAGTTGCTGGTTTTGCCCCATATGAGAAGAGAATCACTGAGCTTCTAAAAGTTGGAAAGGACAAGCGTGCTCTGAAGGTAGCCAAAAGAAAGCTTGGAACCCACAAGAGAGCGAAGAAGAAGAGAGAGGAAATGTCCAGTGTTCTAAGAAAGATGAGGTAATCCTTCTTCCTTCGTAGAAGGACTGTCTGCTGCTTTTATATTTAAACTTACGGCCTAAGTCATGGTTTGTTTATGTGGAAAGTTCTAATATTATATTTAGATCTGCTCCTTTCAAAAGAATCCTAGGCACATTAGTTTGGCTAATGTGTTGGTGTCCAACGCTCTGATGGACACTAGTTAGTACAATGGATGTATATCCAACGCTTGATGGACACTAATTACAATGATGTATTAGACGCCAGTTTCAAACTTTGGAGTTAACGTTGGCCGAACATTTGTTAAATTTAGCTTGACTTTGAATATAATTTGAGAACAAAAATCACCAGACACATTTTTTAAAGAATGTAAATTCTCAAACCTTCTGACTCTGAATTTTCTTGTATAAAAATAATGTACATCTTTAGCAAAATGTACATCACCAGTTGACGTATTCTTGTTGTGTCGATGTTCTTAGTACTCTTATAAAATGATGAATGTGTTCGTCGCATCTGTTTCTTGTATTTTTATCAATCATTTTTAAGATGTGGGTTGAAATTTGCCAGGAAAGGTACATTCTCATTTCATGACTGGATATATTGTATTTTCAGGGCCGGTGGAGGTGCTGAGAAGAAGAAGTGAGATCTACACTTGCTCATTCATTCAAAGTCTTGCACTGTGGCTACTCATTTTTGTTTGTTTTAGGTTTCAATTTGTCAGAGACTGAGACCGAGCTGGAGCTTATAATCAATTTCAGTTTTGTGATCTTTGAACTTGTTTTACTAACACCCAATTTTGTTATGGCTCCGTTTGTTTCAATGATGCATTGTGGTTTGATGAATTAATTAGCCAGTCGTGTCATTTTTTGAGTTTGTGGTTTATGTCTTCCCCTTGATTCATCAGTTTATTCTATATTGGGTTTTAAAATATTTGAGAATTTTAAGTATTTTTATGAACTTTATATACTTACATAACAAAATCTTTCTAGATATGTTCATTCATAGGGTTGGAACATTTTGTCAACATTCGTATTTAAAACTTTTG

Coding sequence (CDS)

ATTAAACAATTATTGGCATCATATAAATTCTCCTCTAAATCCCAAACCCTAAATTTTCATACTCGGTCGTCAGATTCATCGAAACAGGTAATGGCTCCGAAACAGCCGAATACTGGCCTTTTTGTTGGTCTGAACAAGGGCCACATTGTCACCAAGAAGGAGTTGGCCCCACGGCCCTCAGATCGTAAAGGAAAATCAAGTAAAAGAGTCCTCTTTGTCCGGAGTTTGATCCGGGAAGTTGCTGGTTTTGCCCCATATGAGAAGAGAATCACTGAGCTTCTAAAAGTTGGAAAGGACAAGCGTGCTCTGAAGGTAGCCAAAAGAAAGCTTGGAACCCACAAGAGAGCGAAGAAGAAGAGAGAGGAAATGTCCAGTGTTCTAAGAAAGATGAGGGCCGGTGGAGGTGCTGAGAAGAAGAAGTGA

Protein sequence

IKQLLASYKFSSKSQTLNFHTRSSDSSKQVMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK
Homology
[Close]
BLAST of Cucsat.G21174 vs. ExPASy Swiss-Prot
Match: O80929 (60S ribosomal protein L36-1 OS=Arabidopsis thaliana OX=3702 GN=RPL36A PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 9.2e-39
Identity = 82/94 (87.23%), Postives = 90/94 (95.74%), Query Frame = 0 

Query: 8   TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVG 67
           TGLFVGLNKGH+VT++ELAPRP+ RKGK+SKR +F+R LIREVAG APYEKRITELLKVG
Sbjct: 8   TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVG 67

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 102
           KDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR
Sbjct: 68  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101

[Close]
BLAST of Cucsat.G21174 vs. ExPASy Swiss-Prot
Match: Q9M352 (60S ribosomal protein L36-2 OS=Arabidopsis thaliana OX=3702 GN=RPL36B PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 9.2e-39
Identity = 83/101 (82.18%), Postives = 92/101 (91.09%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+R+LI+EVAG APYEKRI
Sbjct: 1   MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 102
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101

[Close]
BLAST of Cucsat.G21174 vs. ExPASy Swiss-Prot
Match: Q9LZ57 (60S ribosomal protein L36-3 OS=Arabidopsis thaliana OX=3702 GN=RPL36C PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.3e-37
Identity = 80/94 (85.11%), Postives = 90/94 (95.74%), Query Frame = 0 

Query: 8   TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVG 67
           TGLFVGLNKGH+VTK+E  PRP++RKGK+SKR +F+R+LI+EVAG APYEKRITELLKVG
Sbjct: 4   TGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVG 63

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 102
           KDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR
Sbjct: 64  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 97

[Close]
BLAST of Cucsat.G21174 vs. ExPASy Swiss-Prot
Match: P52866 (60S ribosomal protein L36 OS=Daucus carota OX=4039 GN=RPL36 PE=3 SV=2)

HSP 1 Score: 142.5 bits (358), Expect = 2.6e-33
Identity = 75/91 (82.42%), Postives = 81/91 (89.01%), Query Frame = 0 

Query: 1  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
          MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKR  FVR+LIREVAGF PYEKRI
Sbjct: 1  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRI 60

Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKKRE 92
          TELLKVGKDKRALKV + K+G H +  K+ E
Sbjct: 61 TELLKVGKDKRALKVRQEKVG-HSQESKEEE 90

[Close]
BLAST of Cucsat.G21174 vs. ExPASy Swiss-Prot
Match: Q9LRB8 (60S ribosomal protein L36 OS=Ulva compressa OX=63659 GN=RL36 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.8e-27
Identity = 66/90 (73.33%), Postives = 76/90 (84.44%), Query Frame = 0 

Query: 12  VGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKR 71
           VGLNKGH VTKK   PRPS RKG  S+RV  VR+++REVAG+APYE+R+ ELLKVGKDKR
Sbjct: 6   VGLNKGHQVTKKAGTPRPSRRKGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVGKDKR 65

Query: 72  ALKVAKRKLGTHKRAKKKREEMSSVLRKMR 102
           ALK+ KRKLGTH R KKKREEM+ VLRKM+
Sbjct: 66  ALKMCKRKLGTHMRGKKKREEMAGVLRKMQ 95

[Close]
BLAST of Cucsat.G21174 vs. NCBI nr
Match: XP_004140771.1 (60S ribosomal protein L36-2 [Cucumis sativus] >XP_004152381.1 60S ribosomal protein L36-2 [Cucumis sativus] >XP_008436991.1 PREDICTED: 60S ribosomal protein L36-2-like [Cucumis melo] >XP_008439254.1 PREDICTED: 60S ribosomal protein L36-2-like [Cucumis melo] >ADN34294.1 60S ribosomal protein l36e [Cucumis melo subsp. melo] >KAA0033670.1 60S ribosomal protein L36-2-like isoform X2 [Cucumis melo var. makuwa] >KAA0055075.1 60S ribosomal protein L36-2-like isoform X2 [Cucumis melo var. makuwa] >KGN50297.1 hypothetical protein Csa_000263 [Cucumis sativus] >KGN57388.1 hypothetical protein Csa_009903 [Cucumis sativus])

HSP 1 Score: 184 bits (468), Expect = 2.60e-58
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101

[Close]
BLAST of Cucsat.G21174 vs. NCBI nr
Match: XP_022945858.1 (60S ribosomal protein L36-2-like [Cucurbita moschata] >XP_022958049.1 60S ribosomal protein L36-2-like [Cucurbita moschata] >XP_022958050.1 60S ribosomal protein L36-2-like [Cucurbita moschata] >XP_022995694.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_023532485.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo] >XP_023532486.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo] >XP_023541175.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo] >KAG6605730.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035637.1 60S ribosomal protein L36-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 184 bits (468), Expect = 2.60e-58
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101

[Close]
BLAST of Cucsat.G21174 vs. NCBI nr
Match: KAG7013242.1 (60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 184 bits (468), Expect = 2.69e-58
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 2   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 61

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR
Sbjct: 62  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 102

[Close]
BLAST of Cucsat.G21174 vs. NCBI nr
Match: XP_022923053.1 (60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata] >XP_022923054.1 60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata] >XP_022923055.1 60S ribosomal protein L36-2-like isoform X2 [Cucurbita moschata] >XP_022923056.1 60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata] >XP_022985002.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_022985003.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_022985004.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_023552431.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183 bits (465), Expect = 7.46e-58
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101

[Close]
BLAST of Cucsat.G21174 vs. NCBI nr
Match: XP_022155584.1 (60S ribosomal protein L36-2-like [Momordica charantia])

HSP 1 Score: 183 bits (465), Expect = 7.46e-58
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101

[Close]
BLAST of Cucsat.G21174 vs. ExPASy TrEMBL
Match: A0A0A0L6L0 (60S ribosomal protein L36 OS=Cucumis sativus OX=3659 GN=Csa_3G182240 PE=3 SV=1)

HSP 1 Score: 184 bits (468), Expect = 1.26e-58
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101

[Close]
BLAST of Cucsat.G21174 vs. ExPASy TrEMBL
Match: A0A1S3AYD7 (60S ribosomal protein L36 OS=Cucumis melo OX=3656 GN=LOC103484093 PE=3 SV=1)

HSP 1 Score: 184 bits (468), Expect = 1.26e-58
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101

[Close]
BLAST of Cucsat.G21174 vs. ExPASy TrEMBL
Match: A0A6J1H2C5 (60S ribosomal protein L36 OS=Cucurbita moschata OX=3662 GN=LOC111459396 PE=3 SV=1)

HSP 1 Score: 184 bits (468), Expect = 1.26e-58
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101

[Close]
BLAST of Cucsat.G21174 vs. ExPASy TrEMBL
Match: A0A5A7UN62 (60S ribosomal protein L36 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00730 PE=3 SV=1)

HSP 1 Score: 184 bits (468), Expect = 1.26e-58
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101

[Close]
BLAST of Cucsat.G21174 vs. ExPASy TrEMBL
Match: A0A6J1K6N3 (60S ribosomal protein L36 OS=Cucurbita maxima OX=3661 GN=LOC111491152 PE=3 SV=1)

HSP 1 Score: 184 bits (468), Expect = 1.26e-58
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101

The following BLAST results are available for this feature:
BLAST of Cucsat.G21174 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O809299.2e-3987.2360S ribosomal protein L36-1 OS=Arabidopsis thaliana OX=3702 GN=RPL36A PE=3 SV=1[more]
Q9M3529.2e-3982.1860S ribosomal protein L36-2 OS=Arabidopsis thaliana OX=3702 GN=RPL36B PE=3 SV=1[more]
Q9LZ572.3e-3785.1160S ribosomal protein L36-3 OS=Arabidopsis thaliana OX=3702 GN=RPL36C PE=3 SV=1[more]
P528662.6e-3382.4260S ribosomal protein L36 OS=Daucus carota OX=4039 GN=RPL36 PE=3 SV=2[more]
Q9LRB82.8e-2773.3360S ribosomal protein L36 OS=Ulva compressa OX=63659 GN=RL36 PE=3 SV=1[more]
BLAST of Cucsat.G21174 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140771.12.60e-58100.0060S ribosomal protein L36-2 [Cucumis sativus] >XP_004152381.1 60S ribosomal prot... [more]
XP_022945858.12.60e-58100.0060S ribosomal protein L36-2-like [Cucurbita moschata] >XP_022958049.1 60S riboso... [more]
KAG7013242.12.69e-58100.0060S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma... [more]
XP_022923053.17.46e-5899.0160S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata] >XP_022923054.1... [more]
XP_022155584.17.46e-5899.0160S ribosomal protein L36-2-like [Momordica charantia][more]
BLAST of Cucsat.G21174 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6L01.26e-58100.0060S ribosomal protein L36 OS=Cucumis sativus OX=3659 GN=Csa_3G182240 PE=3 SV=1[more]
A0A1S3AYD71.26e-58100.0060S ribosomal protein L36 OS=Cucumis melo OX=3656 GN=LOC103484093 PE=3 SV=1[more]
A0A6J1H2C51.26e-58100.0060S ribosomal protein L36 OS=Cucurbita moschata OX=3662 GN=LOC111459396 PE=3 SV=... [more]
A0A5A7UN621.26e-58100.0060S ribosomal protein L36 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A6J1K6N31.26e-58100.0060S ribosomal protein L36 OS=Cucurbita maxima OX=3661 GN=LOC111491152 PE=3 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000509Ribosomal protein L36ePFAMPF01158Ribosomal_L36ecoord: 8..101
e-value: 8.5E-43
score: 144.5
IPR000509Ribosomal protein L36ePANTHERPTHR1011460S RIBOSOMAL PROTEIN L36coord: 1..110
IPR000509Ribosomal protein L36ePROSITEPS01190RIBOSOMAL_L36Ecoord: 55..65
IPR038097Ribosomal protein L36e domain superfamilyGENE3D1.10.10.176060S ribosomal protein L36coord: 1..108
e-value: 1.8E-44
score: 152.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..110
NoneNo IPR availablePANTHERPTHR10114:SF1460S RIBOSOMAL PROTEIN L36-1-RELATEDcoord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G21174.T1Cucsat.G21174.T1mRNA
Cucsat.G21174.T4Cucsat.G21174.T4mRNA
Cucsat.G21174.T2Cucsat.G21174.T2mRNA
Cucsat.G21174.T3Cucsat.G21174.T3mRNA
Cucsat.G21174.T6Cucsat.G21174.T6mRNA
Cucsat.G21174.T7Cucsat.G21174.T7mRNA
Cucsat.G21174.T8Cucsat.G21174.T8mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome