Cucsat.G21127 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G21127
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	BHLH transcription factor
Location	ctg910: 2179951 .. 2182831 (-)
RNA-Seq Expression	Cucsat.G21127
Synteny	Cucsat.G21127

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATAGGGTTTTTTTTTGGGTAGATTTCACAAACCCTCCAATACTCTCTTTCCTCTCTCATTACGGGTGAAATGGAAATGTTCAATGCTGAGTCCCCTTTTTCTTTTGACGTGGGAGAAGATCTGGTCCCTCTGCCCTCTCTTCCATCCTCCTCAGTCATCTCTCCGCCCTTGGACAACTACGGTAACCGTGTTTCTCAAAAGCCAAAAAATGGCCGCCGGAAAAAGCCACTGCCAAACACTTGCAATGATGATGGCGGCGATGAGAACCATGACGAACAAAAGAAGAAGAAGATAATACATAGAGATGTGGAGCGCCAAAGAAGACAAGAAATGTCTTCTCTTTACACCACACTTCGCTCGCTTCTCCCTCTTGAATACCTTAAGGTACCAGTAATTTCATTGATTCACCTTGTTCTCGACGTCCACCCCAGAAATATCCATACCTTAATATCCATGAAAATATTTATAATGAGGACGTTAACGGATCAATATTATAAAAACAAAATACTAAAATACTTTATGACTATTTTAACAAGTTAGCATGTGTATTGTAATCCATTTGTATTAATTGAAGGTAGGAGATTTTTAGTATTAGTTTATGATTATAAAATAATTAAATATAAAGTATAATATTTACTACAATAATTTAACCATCTTCATTCAATATTTAAATACAAAACGAATGGTTTACGATGGTAAATATCTATATATACAGAGAATATCATTGATATAAACATAACGAACTACTACCATAAAATTGAGTGCTCAAGTGATAAATTTTTTTATTAATGATTGATCGTTATAAATCTATCCTATCAAGTAACAAACCTCAAAATAAATTGAAACATTAACTTAAAAATAAATTACAGTTTTAAATTAAAAATAAATTGGAAAACAAAAAAAATGGAAGAAATTTGGTTAATATGAGAATTAAAAAAAAAACCACGTTTTAAATAAGTTACAGTAACAATAGAATTAAATCAATTTTTTATACAATAACGTGAATAATGGTACGTTTTTTAGAGGAGAAAAATAAATTAATACTTTTCTTATATAAAATGTGAAAGAAGATTCAATTTAGTTAAAATAAGAATTAGTTAAAAACAATTCTCATTTAAAAGAACCACCATGATATTTTTTAAATCAAATTCTTAATTTAGCACATTTTAACCTTCATTAATTATTTGATTAAAACTATTTCTTTTTCACAATTTAATTAAAATTAAAAAAAATTAATAGATCAGTTTTAAAAATAACAAAATAAATTAATATATTTACAAGTTATAGCAAAATTTTGAATTCTATCAATTATAGTCTTCTATCATTAGAGCATATCAATAACTATCCCTGATAAAATTTGTTTTACGTTGTAAATTTTGAAAATTTTGCTATTTTTGAAAATTTCTAAAATAAATAACATTTTAATTAAATTAAAAAATTAACCAAAATTAAGAATGATCCATTTTTAAAATTAGAAAAATAAATTAAAATATTAATAAGATGTAGTAAAATTTTGGATTTTGTGTATGATAGTTTTATATCACACTAGCATATGAAGGAATAAAATTTTGCTATAGATTGTATATATTTTAAATCACATTTTAATTTAATTAAAAAAGTTAAACTAGAAAGATTAAATTAAAAAAGTTTAGACTAGATAAAAAGAATTTAATTAAGAAAGTAAAAAGAAATGAGGCTCTACCAATGTGAATGTGAATGTGAATGCGAATGCGAGAGAAATCAACAATATTTTGGTAAAGAATTTAATTAAGAAAGTATTAAAAAAAAAGGAAATTGTGAGAGAAAAACTAAAAACATCCGATCAACTCTATTTTGCTAAATGATAATGATGCTACAAAGGTTTCCACGTTCCACCTAGTGAAGGTGTTCCGATGTACCTCCTGAGTCATGTCGTATATTTTTTTATATAAAAAACACTAACTAGTTTTGAAAAGTGTTAAATAGATTTGGAAATACCATCATTTCAACATAAGGTTTCTAATTGGTATTAAAATCTATATTTCTAAAAACGTTTCATCTAAATTTTACTATATAGTTGTAACTTGAGAAAACAAACGAAAAAGAAAATACTAACATGTCTTTTTTAATTTTTTATGACATACATCCATCTTCTTCCACAAACTTAACCCGATAGTTAACGATTTCATTCCCACAGGGAAAACGATCAATATCAGACCACATGCAAGAGACAGTTAGTTACATTCAACATATGCAAAGAAGGATCCAACAACTGAAAGATAAAAGAGGTACGCTAAGAGAACTCGCCAGCCAAACTACGGTCGCCATAGCCGGTACGACAGAAACGCTTAATTCCTCAGAAAGGGCCTCAGCAGTGGTGAGGGCAAAAGATGGAATAGGAATTCAAGTTGTTTTAGACACTGCCACAAAACAAAGGCTCCCTCTTTCCATCTTTGTTCAAGCTTTAGTTTCTGAAGGCCTTGAAATCCTCAACTGCATTTCAAACAGACTGAATGAGAGGTTCATTCACACCATTGAATGCCAACCTCTTCTAAATGATGATGGCTGTTATCCAACCATTGATGTCTCTGTGCTTCAGCATAAGTTAGCCAATTTGGAATATTATCCTTTAGATTAGATAAAATTATCGAGTTGATTGCCTTGATGTGCGAATTGCACTGATATATCATCACCATCAAGTTTAGAAATAGTATATTAATCAGGTGCATTTATATACTATCGTATTTATATACTAGAGTACTTTAGATGGTTGTATCATTATCAAGTTTATCAATAATAATATAATCAATCAGATGCGTACCAACTATTTAAATAGTGCAACAGTGTCAAATTTATCAGCAATGAATTAAACAGTCATGTGTATCAAGTTTGTTAGTTG

Coding sequence (CDS)

ATGGAAATGTTCAATGCTGAGTCCCCTTTTTCTTTTGACGTGGGAGAAGATCTGGTCCCTCTGCCCTCTCTTCCATCCTCCTCAGTCATCTCTCCGCCCTTGGACAACTACGGTAACCGTGTTTCTCAAAAGCCAAAAAATGGCCGCCGGAAAAAGCCACTGCCAAACACTTGCAATGATGATGGCGGCGATGAGAACCATGACGAACAAAAGAAGAAGAAGATAATACATAGAGATGTGGAGCGCCAAAGAAGACAAGAAATGTCTTCTCTTTACACCACACTTCGCTCGCTTCTCCCTCTTGAATACCTTAAGGGAAAACGATCAATATCAGACCACATGCAAGAGACAGTTAGTTACATTCAACATATGCAAAGAAGGATCCAACAACTGAAAGATAAAAGAGGTACGCTAAGAGAACTCGCCAGCCAAACTACGGTCGCCATAGCCGGTACGACAGAAACGCTTAATTCCTCAGAAAGGGCCTCAGCAGTGGTGAGGGCAAAAGATGGAATAGGAATTCAAGTTGTTTTAGACACTGCCACAAAACAAAGGCTCCCTCTTTCCATCTTTGTTCAAGCTTTAGTTTCTGAAGGCCTTGAAATCCTCAACTGCATTTCAAACAGACTGAATGAGAGGTTCATTCACACCATTGAATGCCAACCTCTTCTAAATGATGATGGCTGTTATCCAACCATTGATGTCTCTGTGCTTCAGCATAAGTTAGCCAATTTGGAATATTATCCTTTAGATTAG

Protein sequence

MEMFNAESPFSFDVGEDLVPLPSLPSSSVISPPLDNYGNRVSQKPKNGRRKKPLPNTCNDDGGDENHDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSYIQHMQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIGIQVVLDTATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTIDVSVLQHKLANLEYYPLD

Homology

[Close]

BLAST of Cucsat.G21127 vs. ExPASy Swiss-Prot
Match: Q9STJ6 (Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.8e-25
Identity = 78/220 (35.45%), Postives = 131/220 (59.55%), Query Frame = 0


Query: 34  LDNYGNRVSQKPKNGRRKKPLPNTCNDDGGD-------ENHDEQKKKKIIHRDVERQRRQ 93
           +D Y N     PK  +R++P  ++  + GG        E  D +KKKK++HRD+ERQRRQ
Sbjct: 1   MDPYKN---LNPKGYQRQRPF-SSAGESGGSGGSGTAHETDDNKKKKKLLHRDIERQRRQ 60

Query: 94  EMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSYIQHMQRRIQQLKDKRGTLRELASQ-- 153
           EM++L+ TLR+ LPL+Y+KGKR++SDH+   V++I+  + RI++L  +R  L     Q  
Sbjct: 61  EMATLFATLRTHLPLKYIKGKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGY 120

Query: 154 -TTVAIAGTTETLNSSERASAVVRAK-DGIGIQVVLDTATKQRLPLSIFVQALVSEGLEI 213
            +      T   +  SE A+ +V+    G+ + V  +++  + LPLS  ++ +  +GLE+
Sbjct: 121 KSNPDPGKTGSDVGKSEPATVMVQPHVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEV 180

Query: 214 LNCISNRLNERFIHTIECQPLLNDDGCYPTIDVSVLQHKL 243
           ++  + R+N+R +HTI+ +  +N  GC   ID+  LQ KL
Sbjct: 181 MSSFTTRVNDRLMHTIQVE--VNSFGC---IDLLWLQQKL 211

[Close]

BLAST of Cucsat.G21127 vs. ExPASy Swiss-Prot
Match: Q9FLI0 (Transcription factor bHLH120 OS=Arabidopsis thaliana OX=3702 GN=BHLH120 PE=2 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-23
Identity = 75/204 (36.76%), Postives = 125/204 (61.27%), Query Frame = 0


Query: 42  SQKPKNGRRKKPLPNTCNDDGGDENHDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPL 101
           S  PK  R +  +P         E  + +K+KK++HR++ERQRRQEM+ L+ +LRS LPL
Sbjct: 4   SNNPKKTRHQSHMP--------QERDETKKEKKLLHRNIERQRRQEMAILFASLRSQLPL 63

Query: 102 EYLKGKRSISDHMQETVSYIQHMQRRIQQLKDKRGTL-RELASQTTVAIAGTTETLNSSE 161
           +Y+KGKR++SDH+   VS+I+  Q RI+ L  +R  L RE+   T++  +G+    + SE
Sbjct: 64  KYIKGKRAMSDHVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSRSE 123

Query: 162 RASAVVRAKDGIGIQVVLDTATK--QRLPLSIFVQALVSEGLEILNCISNRLNERFIHTI 221
            AS +V+     G +VV+ +     +  PLS  ++ L  +GLE+++ ++ R+NER ++TI
Sbjct: 124 PASVMVQPCVS-GFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYTI 183

Query: 222 ECQPLLNDDGCYPTIDVSVLQHKL 243
           + +  +N   C+   D++ LQ KL
Sbjct: 184 QVE--VNSFDCF---DLAWLQQKL 193

[Close]

BLAST of Cucsat.G21127 vs. ExPASy Swiss-Prot
Match: Q9LQ08 (Transcription factor bHLH125 OS=Arabidopsis thaliana OX=3702 GN=BHLH125 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 9.7e-21
Identity = 73/220 (33.18%), Postives = 126/220 (57.27%), Query Frame = 0


Query: 26  SSSVISPPLDNYGNR-----VSQKPKNGRRKKPLPN-TCNDDGGDENHDEQKKKKIIHRD 85
           S S +  P  +Y N      ++ K     +K+ L + T   +  ++N D+++ KK+ HRD
Sbjct: 21  SDSFLLSPFISYQNNDVFHSITNKIGGSNKKRSLCDITYGANEANKNDDDRESKKMKHRD 80

Query: 86  VERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSYIQHMQRRIQQLKDKRGTLR 145
           +ERQRRQE+SSL+  LR+LLP +Y++GKRS SDH+ + V+YI+ +Q +I++L +KR  ++
Sbjct: 81  IERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQAVNYIKDLQIKIKELNEKRNRVK 140

Query: 146 ELASQTTV---AIAGTTETLNSS-------------ERASAVVRAKDGIGIQVVLDTAT- 205
           ++ S TT    AI   T +L+SS             ++   VV     +G+++++     
Sbjct: 141 KVISATTTTHSAIEECTSSLSSSAASTLSSSCSCVGDKHITVVVTPCLVGVEIIISCCLG 200

Query: 206 KQRLPLSIFVQALVSE-GLEILNCISNRLNERFIHTIECQ 222
           + +  LS  +Q L  E    +++C+S R  +RF+HTI  Q
Sbjct: 201 RNKSCLSSVLQMLAQEQRFSVVSCLSARRQQRFMHTIVSQ 240

[Close]

BLAST of Cucsat.G21127 vs. ExPASy Swiss-Prot
Match: Q9FLI1 (Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.1e-19
Identity = 63/177 (35.59%), Postives = 110/177 (62.15%), Query Frame = 0


Query: 73  KKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSYIQHMQRRIQQLK 132
           +K++HR+ ERQRRQEM+SLY +LRSLLPL ++KGKRS SD + E V+YI+++QR+I++L 
Sbjct: 2   EKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 61

Query: 133 DKRGTLRELASQTTVAIAG--TTETLNSSERASAVVRAKDGIGIQVVLDTATKQRLP-LS 192
            +R  L  L+  + +  +     E +      + VV  +  +G++++L +      P  S
Sbjct: 62  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQPRFS 121

Query: 193 IFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTIDVSVLQHKLANLE 247
             +Q L   GL +LN IS+ +++R ++TI+ +  +ND      ID++ L+ +L  ++
Sbjct: 122 SVLQVLSEYGLCLLNSISSIVDDRLVYTIQAE--VNDMAL--MIDLAELEKRLIRMK 174

[Close]

BLAST of Cucsat.G21127 vs. ExPASy Swiss-Prot
Match: Q9STJ7 (Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.0e-18
Identity = 55/149 (36.91%), Postives = 95/149 (63.76%), Query Frame = 0


Query: 73  KKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSYIQHMQRRIQQLK 132
           +K++H+++E++RRQEM+SLY +LRSLLPLE+++GKRS SD ++  V+YI ++QR I+ + 
Sbjct: 2   EKLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDIN 61

Query: 133 DKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIGIQVVLDTATKQRLPLSIFV 192
            KR  L  L+ ++      ++     +E ++ VV     +GI++VL      + P S  +
Sbjct: 62  SKRDDLVLLSGRS----FRSSNEQEWNEISNHVVIRPCLVGIEIVLSIL---QTPFSSVL 121

Query: 193 QALVSEGLEILNCISNRLNERFIHTIECQ 222
           Q L   GL +L  I + +N+R IHT++ +
Sbjct: 122 QVLREHGLYVLGYICSSVNDRLIHTLQAE 143

[Close]

BLAST of Cucsat.G21127 vs. NCBI nr
Match: NP_001295816.1 (transcription factor bHLH118-like [Cucumis sativus] >AIT72026.1 bHLH transcription factor [Cucumis sativus] >KGN50162.1 hypothetical protein Csa_000184 [Cucumis sativus])

HSP 1 Score: 483 bits (1244), Expect = 7.60e-172
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 1   MEMFNAESPFSFDVGEDLVPLPSLPSSSVISPPLDNYGNRVSQKPKNGRRKKPLPNTCND 60
           MEMFNAESPFSFDVGEDLVPLPSLPSSSVISPPLDNYGNRVSQKPKNGRRKKPLPNTCND
Sbjct: 1   MEMFNAESPFSFDVGEDLVPLPSLPSSSVISPPLDNYGNRVSQKPKNGRRKKPLPNTCND 60

Query: 61  DGGDENHDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSY 120
           DGGDENHDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSY
Sbjct: 61  DGGDENHDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSY 120

Query: 121 IQHMQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIGIQVVLDT 180
           IQHMQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIGIQVVLDT
Sbjct: 121 IQHMQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIGIQVVLDT 180

Query: 181 ATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTIDVSVLQH 240
           ATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTIDVSVLQH
Sbjct: 181 ATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTIDVSVLQH 240

Query: 241 KLANLEYYPLD 251
           KLANLEYYPLD
Sbjct: 241 KLANLEYYPLD 251

[Close]

BLAST of Cucsat.G21127 vs. NCBI nr
Match: KAA0042815.1 (transcription factor bHLH120-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 438 bits (1127), Expect = 4.98e-154
Identity = 231/251 (92.03%), Postives = 236/251 (94.02%), Query Frame = 0


Query: 1   MEMFNAESPFSFDVGEDLVPLPSLPSSSVISPPLDNYGNRVSQKPKNGRRKKPLPNTCND 60
           ME FN ESPFSFD+GEDLVPLPSLPSSSVISPPLDN GNRVSQKPKNGRRKKPLPNTCND
Sbjct: 1   MEFFNVESPFSFDLGEDLVPLPSLPSSSVISPPLDNDGNRVSQKPKNGRRKKPLPNTCND 60

Query: 61  DGGDENHDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSY 120
           DGGDEN DEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSY
Sbjct: 61  DGGDENLDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSY 120

Query: 121 IQHMQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIGIQVVLDT 180
           IQHMQRRIQQLKDKR  LRELA+QT V I GTTETLNSSER S VVRAKDGIGIQVVLDT
Sbjct: 121 IQHMQRRIQQLKDKRDKLRELANQTMVII-GTTETLNSSERDSVVVRAKDGIGIQVVLDT 180

Query: 181 ATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTIDVSVLQH 240
           ATK RLPLSIFVQALV+EGLEILNCISNRLNERFIHTIECQ +L DDGCYPTID S+LQH
Sbjct: 181 ATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTIDASMLQH 240

Query: 241 KLANLEYYPLD 251
           KLANLEYYPLD
Sbjct: 241 KLANLEYYPLD 250

[Close]

BLAST of Cucsat.G21127 vs. NCBI nr
Match: XP_038875626.1 (transcription factor bHLH118-like [Benincasa hispida])

HSP 1 Score: 356 bits (914), Expect = 1.28e-121
Identity = 189/248 (76.21%), Postives = 212/248 (85.48%), Query Frame = 0


Query: 4   FNAESPFSFDVGEDLVPLPSLPSSSVISPPLDNYGNRVSQKPKNGRRKKPLPNTCNDDGG 63
           FN ESP SFD+G+DL+PLPSLPSSS IS P+DN  N VSQ  KNGRRKKPLPNTCND+G 
Sbjct: 3   FNVESPVSFDLGDDLLPLPSLPSSSAISMPVDNRRNGVSQNQKNGRRKKPLPNTCNDNGN 62

Query: 64  DENHDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSYIQH 123
            E+ +E++KKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDH+ ETV+YIQH
Sbjct: 63  -ESPNEERKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHIHETVNYIQH 122

Query: 124 MQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIGIQVVLDTATK 183
           MQ RIQQL DKR  LR+L++ TT  +  T +TLNSSER S VVR KDGIGIQVV+DTATK
Sbjct: 123 MQERIQQLSDKRDELRKLSNGTTATV-DTAKTLNSSERDSVVVRPKDGIGIQVVIDTATK 182

Query: 184 QRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTIDVSVLQHKLA 243
            R PLS F+QAL +EGLEIL+CISNRLNERFIHTIECQP+LN+DG YP IDV  L HKL 
Sbjct: 183 HRFPLSNFLQALAAEGLEILSCISNRLNERFIHTIECQPILNNDGVYPNIDVFELHHKLT 242

Query: 244 NLEYYPLD 251
           NLEY+PLD
Sbjct: 243 NLEYFPLD 248

[Close]

BLAST of Cucsat.G21127 vs. NCBI nr
Match: KAG6579462.1 (Transcription factor basic helix-loop-helix 120, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 270 bits (690), Expect = 1.53e-87
Identity = 156/257 (60.70%), Postives = 191/257 (74.32%), Query Frame = 0


Query: 4   FNAESPFSFDVGEDLVPLPSLPSS----SVIS----PPLDNYGNRVSQKPKNGRRKKPLP 63
           FN ESPFSFD+G++L PLPS+ S     SV      PPLDN G   S++PK   R+ P P
Sbjct: 3   FNIESPFSFDMGDELFPLPSISSCIHNISVPQFPSIPPLDN-GKSASKRPKRSSRRNPPP 62

Query: 64  NTCNDDGGDENHDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQ 123
           N  ND    EN ++QK+KKI+HRDVERQRRQEMSSLY++LRSLLPLEYLKGKRSISDHM 
Sbjct: 63  NASND----ENPNDQKRKKILHRDVERQRRQEMSSLYSSLRSLLPLEYLKGKRSISDHMH 122

Query: 124 ETVSYIQHMQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIGIQ 183
           ETV YIQ+MQRRI+QL DKR  L+ L+ +      G  ETLNSS R S VVR+K+G+GIQ
Sbjct: 123 ETVKYIQYMQRRIRQLSDKRDELKNLSGENMAV--GMVETLNSSRRDSVVVRSKNGLGIQ 182

Query: 184 VVLDTATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTIDV 243
           VVLDT ++ RLP+S  ++ L  EGLEIL+CI+ ++NER++H IECQ  + +DG YP+IDV
Sbjct: 183 VVLDTTSQHRLPVSNILRVLAVEGLEILSCITTKVNERYLHKIECQ--VENDGFYPSIDV 242

Query: 244 SVLQHKLANL-EYYPLD 251
             LQHKL NL EY PLD
Sbjct: 243 CELQHKLTNLLEYLPLD 250

[Close]

BLAST of Cucsat.G21127 vs. NCBI nr
Match: KAG6579464.1 (Transcription factor basic helix-loop-helix 126, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 268 bits (684), Expect = 7.54e-87
Identity = 150/248 (60.48%), Postives = 192/248 (77.42%), Query Frame = 0


Query: 4   FNAESPFSFDVGEDLVPLPSLPSSSVISPPLDNYGNRVSQKPKNGRRKKPLPNTCNDDGG 63
           FN ESPFSFD G++L PLP L        PL+N  N  S+KPK  RR+KP PNT ND   
Sbjct: 3   FNIESPFSFDFGDELFPLPPLS-------PLENK-NIASKKPKACRRRKPPPNTSND--- 62

Query: 64  DENHDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSYIQH 123
            EN +EQK+KKI+HRDVERQRRQEMSSLY++LRSLLPLEYLKGK SISDHM ETV YIQ 
Sbjct: 63  -ENPNEQKRKKIMHRDVERQRRQEMSSLYSSLRSLLPLEYLKGKCSISDHMHETVKYIQS 122

Query: 124 MQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIGIQVVLDTATK 183
           +Q RI+QL D+R  L+ L+++      GTTETLNSS R S VV +K+ +GIQVVL TAT+
Sbjct: 123 IQTRIRQLSDQRDELKSLSNENMAV--GTTETLNSSRRDSVVVSSKNELGIQVVLHTATQ 182

Query: 184 QRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTIDVSVLQHKLA 243
            R+P+S  ++ LV+EGLEI++CI+ ++NER++HTIEC+ ++ ++GCYP+I+V  L+HKL 
Sbjct: 183 HRVPVSNILRVLVAEGLEIMSCITTKVNERYLHTIECK-VVENNGCYPSINVFELEHKLI 235

Query: 244 NLEYYPLD 251
           NLEY+PLD
Sbjct: 243 NLEYFPLD 235

[Close]

BLAST of Cucsat.G21127 vs. ExPASy TrEMBL
Match: A0A097IYN6 (BHLH transcription factor OS=Cucumis sativus OX=3659 GN=Csa5G156220 PE=2 SV=1)

HSP 1 Score: 483 bits (1244), Expect = 3.68e-172
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 1   MEMFNAESPFSFDVGEDLVPLPSLPSSSVISPPLDNYGNRVSQKPKNGRRKKPLPNTCND 60
           MEMFNAESPFSFDVGEDLVPLPSLPSSSVISPPLDNYGNRVSQKPKNGRRKKPLPNTCND
Sbjct: 1   MEMFNAESPFSFDVGEDLVPLPSLPSSSVISPPLDNYGNRVSQKPKNGRRKKPLPNTCND 60

Query: 61  DGGDENHDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSY 120
           DGGDENHDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSY
Sbjct: 61  DGGDENHDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSY 120

Query: 121 IQHMQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIGIQVVLDT 180
           IQHMQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIGIQVVLDT
Sbjct: 121 IQHMQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIGIQVVLDT 180

Query: 181 ATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTIDVSVLQH 240
           ATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTIDVSVLQH
Sbjct: 181 ATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTIDVSVLQH 240

Query: 241 KLANLEYYPLD 251
           KLANLEYYPLD
Sbjct: 241 KLANLEYYPLD 251

[Close]

BLAST of Cucsat.G21127 vs. ExPASy TrEMBL
Match: A0A5A7TN30 (Transcription factor bHLH120-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003200 PE=4 SV=1)

HSP 1 Score: 438 bits (1127), Expect = 2.41e-154
Identity = 231/251 (92.03%), Postives = 236/251 (94.02%), Query Frame = 0


Query: 1   MEMFNAESPFSFDVGEDLVPLPSLPSSSVISPPLDNYGNRVSQKPKNGRRKKPLPNTCND 60
           ME FN ESPFSFD+GEDLVPLPSLPSSSVISPPLDN GNRVSQKPKNGRRKKPLPNTCND
Sbjct: 1   MEFFNVESPFSFDLGEDLVPLPSLPSSSVISPPLDNDGNRVSQKPKNGRRKKPLPNTCND 60

Query: 61  DGGDENHDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSY 120
           DGGDEN DEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSY
Sbjct: 61  DGGDENLDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSY 120

Query: 121 IQHMQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIGIQVVLDT 180
           IQHMQRRIQQLKDKR  LRELA+QT V I GTTETLNSSER S VVRAKDGIGIQVVLDT
Sbjct: 121 IQHMQRRIQQLKDKRDKLRELANQTMVII-GTTETLNSSERDSVVVRAKDGIGIQVVLDT 180

Query: 181 ATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTIDVSVLQH 240
           ATK RLPLSIFVQALV+EGLEILNCISNRLNERFIHTIECQ +L DDGCYPTID S+LQH
Sbjct: 181 ATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTIDASMLQH 240

Query: 241 KLANLEYYPLD 251
           KLANLEYYPLD
Sbjct: 241 KLANLEYYPLD 250

[Close]

BLAST of Cucsat.G21127 vs. ExPASy TrEMBL
Match: A0A6J1E8G7 (transcription factor bHLH118-like OS=Cucurbita moschata OX=3662 GN=LOC111430345 PE=4 SV=1)

HSP 1 Score: 266 bits (679), Expect = 3.34e-86
Identity = 152/256 (59.38%), Postives = 188/256 (73.44%), Query Frame = 0


Query: 4   FNAESPFSFDVGEDLVPLPSLPS--SSVISP------PLDNYGNRVSQKPKNGRRKKPLP 63
           FN ESP SFD+G++L PLPS+ S   ++  P      PL+N     S++PK   R+ P P
Sbjct: 3   FNIESPISFDLGDELFPLPSISSCIDNISVPQFPSISPLEN-DKSASKRPKRSSRRNPPP 62

Query: 64  NTCNDDGGDENHDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQ 123
           N  ND    EN ++QK+KKI+HRDVERQRRQEMSSLY++LRSLLPLEYLKGK SISDHM 
Sbjct: 63  NASND----ENPNDQKRKKIMHRDVERQRRQEMSSLYSSLRSLLPLEYLKGKPSISDHMH 122

Query: 124 ETVSYIQHMQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIGIQ 183
           ETV YIQ+MQRRI+QL DKR  L+ L+ +      G  ETLNSS R S VVR+K+G+GIQ
Sbjct: 123 ETVKYIQYMQRRIRQLSDKRDELKNLSGENMAV--GMVETLNSSRRDSVVVRSKNGLGIQ 182

Query: 184 VVLDTATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTIDV 243
           VVLDT T+ RLP+S  ++ L  EGLEIL+CI+ ++NER++HTIECQ  +  DG YP+IDV
Sbjct: 183 VVLDTTTQHRLPVSNILRVLAVEGLEILSCITIKVNERYLHTIECQ--VESDGFYPSIDV 242

Query: 244 SVLQHKLANLEYYPLD 251
             LQHKL NLEY PLD
Sbjct: 243 CELQHKLTNLEYLPLD 249

[Close]

BLAST of Cucsat.G21127 vs. ExPASy TrEMBL
Match: A0A6J1I182 (transcription factor bHLH120-like OS=Cucurbita maxima OX=3661 GN=LOC111468949 PE=4 SV=1)

HSP 1 Score: 264 bits (674), Expect = 1.20e-85
Identity = 147/248 (59.27%), Postives = 188/248 (75.81%), Query Frame = 0


Query: 4   FNAESPFSFDVGEDLVPLPSLPSSSVISPPLDNYGNRVSQKPKNGRRKKPLPNTCNDDGG 63
           FN ESPFSF+ G++L PLP +        PL+N  N  S+KPK   R++P PNT ND   
Sbjct: 3   FNIESPFSFEFGDELFPLPPIS-------PLENT-NIASKKPKTCSRRQPPPNTSND--- 62

Query: 64  DENHDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSYIQH 123
            EN +EQK+KKI+HRDVERQRRQEMSSLY++LRSLLPLEYLKGKRSISDHM ETV YIQ 
Sbjct: 63  -ENPNEQKRKKIMHRDVERQRRQEMSSLYSSLRSLLPLEYLKGKRSISDHMHETVKYIQS 122

Query: 124 MQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIGIQVVLDTATK 183
           +Q RIQQL ++R  L+ L+ +      G  ETLNSS R S VV + +G+GIQVVLDTA +
Sbjct: 123 IQTRIQQLSNQRDELKSLSGENMPV--GAVETLNSSRRDSVVVSSTNGLGIQVVLDTAIQ 182

Query: 184 QRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTIDVSVLQHKLA 243
            RLP+S  +Q L++EGLEI++CI+ ++NER++HTIECQ ++ +DGCYP+IDV  L+H+L 
Sbjct: 183 HRLPVSDILQVLIAEGLEIMSCITTKVNERYLHTIECQ-VVENDGCYPSIDVFELRHQLI 235

Query: 244 NLEYYPLD 251
           NLEY PL+
Sbjct: 243 NLEYLPLE 235

[Close]

BLAST of Cucsat.G21127 vs. ExPASy TrEMBL
Match: A0A5A7TLF7 (Transcription factor bHLH36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003210 PE=4 SV=1)

HSP 1 Score: 261 bits (668), Expect = 2.17e-84
Identity = 153/260 (58.85%), Postives = 186/260 (71.54%), Query Frame = 0


Query: 1   MEMFNAESPFSFDVGEDLVPLPSLPSSSVISPP-----LDNYGNR---VSQKPKNGRRKK 60
           M++ N ESPFSFD+G++L+PLPSL        P     L+N  N    VS +PKNGRRKK
Sbjct: 1   MDLNNVESPFSFDLGDELLPLPSLSCIDNCFVPQFPSILENNNNNSITVSPRPKNGRRKK 60

Query: 61  PLPNTCNDDGGDENHDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISD 120
           P  NT +D   + N +E KKKKI+HRDVERQRRQEMSSLY+TLRSLLP+EYLKGKRSI D
Sbjct: 61  PPANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICD 120

Query: 121 HMQETVSYIQHMQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGI 180
           HM ETV YI++MQ +IQ+L DKR  L++L S         TETL S++R   VVRA+DG 
Sbjct: 121 HMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPDMVETETLKSTKRDKVVVRARDGS 180

Query: 181 G-IQVVLDTATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYP 240
           G IQV+LDTAT+ RLPLS  + AL  +GLEIL+C SN+LN+RF+HTIE QP+       P
Sbjct: 181 GGIQVILDTATRHRLPLSNILVALTDQGLEILSCSSNKLNDRFLHTIESQPVFTSTNS-P 240

Query: 241 TIDVSVLQHKLANLEYYPLD 251
            IDVS LQ+ L NLEY PLD
Sbjct: 241 IIDVSGLQYTLTNLEYCPLD 259

The following BLAST results are available for this feature:

BLAST of Cucsat.G21127 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STJ6	3.8e-25	35.45	Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=...	[more]
Q9FLI0	1.2e-23	36.76	Transcription factor bHLH120 OS=Arabidopsis thaliana OX=3702 GN=BHLH120 PE=2 SV=...	[more]
Q9LQ08	9.7e-21	33.18	Transcription factor bHLH125 OS=Arabidopsis thaliana OX=3702 GN=BHLH125 PE=2 SV=...	[more]
Q9FLI1	4.1e-19	35.59	Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1	[more]
Q9STJ7	2.0e-18	36.91	Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=...	[more]

BLAST of Cucsat.G21127 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001295816.1	7.60e-172	100.00	transcription factor bHLH118-like [Cucumis sativus] >AIT72026.1 bHLH transcripti...	[more]
KAA0042815.1	4.98e-154	92.03	transcription factor bHLH120-like protein [Cucumis melo var. makuwa]	[more]
XP_038875626.1	1.28e-121	76.21	transcription factor bHLH118-like [Benincasa hispida]	[more]
KAG6579462.1	1.53e-87	60.70	Transcription factor basic helix-loop-helix 120, partial [Cucurbita argyrosperma...	[more]
KAG6579464.1	7.54e-87	60.48	Transcription factor basic helix-loop-helix 126, partial [Cucurbita argyrosperma...	[more]

BLAST of Cucsat.G21127 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A097IYN6	3.68e-172	100.00	BHLH transcription factor OS=Cucumis sativus OX=3659 GN=Csa5G156220 PE=2 SV=1	[more]
A0A5A7TN30	2.41e-154	92.03	Transcription factor bHLH120-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A6J1E8G7	3.34e-86	59.38	transcription factor bHLH118-like OS=Cucurbita moschata OX=3662 GN=LOC111430345 ...	[more]
A0A6J1I182	1.20e-85	59.27	transcription factor bHLH120-like OS=Cucurbita maxima OX=3661 GN=LOC111468949 PE...	[more]
A0A5A7TLF7	2.17e-84	58.85	Transcription factor bHLH36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 114..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..74
None	No IPR available	PANTHER	PTHR13935:SF110	HELIX-LOOP-HELIX DNA-BINDING SUPERFAMILY PROTEIN, PUTATIVE-RELATED	coord: 43..245
None	No IPR available	CDD	cd18914	bHLH_AtORG2_like	coord: 73..146 e-value: 6.33192E-27 score: 97.3739
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 78..130 e-value: 7.6E-6 score: 35.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 74..125 e-value: 3.3E-10 score: 39.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 72..124 score: 13.471454
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 63..153 e-value: 9.8E-13 score: 49.8
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 71..143
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 43..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G21127.T1	Cucsat.G21127.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000112	regulation of cellular macromolecule biosynthetic process
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0090575	RNA polymerase II transcription regulator complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity