Cucsat.G21046 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G21046
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Alpha-L-fucosidase
Location	ctg910: 777703 .. 779311 (-)
RNA-Seq Expression	Cucsat.G21046
Synteny	Cucsat.G21046

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTTTAATCTCAAGGATTGTAATATCTCTGTTTGGATTATTTAATTTGTTCATATCTGCAAAAAGAATCTTTTCCCCACAACCCCACCCTCTGTCACTGTCCTCTCATGTGTTCATAGAACACACACAAACAAGCTTCACAATTTTATCGATGGCGAAAATAATGGGTCACCATTGTTCTTCCATCTTCTTCCTCACATTCCTTCATCTCCTCCATTTCTCTTCTCCAAAACTCGAGGTCTCAACGCCACCGCCATTGCCAATCCTCCCACTCCCTTCATTCTCCCAGTTGAAATGGCAACAAAGAGAAGTAATCATGTTCCTTCACTTCGGTCCCAACACTTTCACCGACTCCGAATGGGGCACCGGCGCCGAGTCTCCCGCCATCTTCAACCCCACTGCTCTAAACGCCACCCAGTGGGCTGCCACCGCCGCCGCTGCTGGAATTTCTCTTATGATTCTCACTGCTAAGCACCATGATGGCTTCTGCCTCTGGCCTTCTAAATACACTACACACTCTGTTTCCCGCAGCCCTTGGAAGAATGGCCAAGGCGACGTCGTTGAGGAATTTGTTACCGCCGCTACCGCCCACGGGATCGACGTGGGACTGTATTTGTCGCCGTGGGATCGACATGATCGGAGATATAGCCATGATTTGCCTTACAATGAGTACTACTTGGCTCAGTTACAAGAGCTTCTCAAAAGGTAAGACTAATCCATCAACTTAATTAATTTTCTTCCAAATAAAATGAAAATTTTCATATGCATTTCAACATTTTCATTAAACTCTATAAAAGTTCAGTCCTAATCTTAAATATACTTTTTAATAATCAATATTTTGTCGATTTTCATAAAACTAAGATCTTTCTATATTTTAAAAAAAATGTATTTGTGAAGGGAAACTATTCCTCAGATTTAAATTTTTTTTGCCACCCCATCTCTTCCTTCCAATCATTTTGTGCCACGTAGCCAAATTTGTTTGCTTGATTATGAAGTTATTTTGTTTCTTGCGAATACAACAAACTATTAATAGTTTTAAAATCTTGATTCTCATTTTTTTCCTTATACTATATTTTAGTTTTGATTCTCAAATTGTTTTTATTTTAATCTATTCAGCTTGTTCATCGTATTTTTATTTAATTCATGTAACCACAAAGTAAATGTAATTTTTTCAAATCTAGAATTTGTTGGGTACACATAAATTTAAAAACAAGTTATATATCGAATAGAAATTGAATAGTCATGTTTTCAAATGTGTTTTGTAGCAATTTAGACATTGAATTTTAGTTTTAACAGTGGTTTAAATTTCGTTTAACAAAGAATATTCATAAACCATAAAATTAGTTCTAATTATTAATATATGAGCATGTTTTAGGTTAGAATTTTTATATAATTATATTGGAGAATTATGGTAAATGTGGTAAATTCAAGCATTGTTTATTCATCCTTATTTTATTTAACAATTTGATTTTGTGGATCCCATTTTAGATATGGAAATGTGAAGGAGATTTGGTTTGATGGAGCCAAAGGCCAAAATGCTCCAAACATGTCATATTATTTCTCAGATTGGTTTGCAATGGTTAAGGAGTTACAAAGCTCCATCAACATATTTTCCGACGCTGGACCAGACGTTCGATGGGTTGGGAACGAGAAAGGTTTTGCAGGAACCTCGTGCTGGTCGACGATCAACCGAACTTCGCTCGCCATTGGAGCAGAAGGCATTACCCCGTATGTGTTTTTCTTTGATGGTATATTATAAAACTATAAAATAGGTATTTAATTAATTTGGTTTTATTGATGGATGTTGTTGATATAAATCTGTACGCACTAACTAAGTTTTGGCTATACTATATCTTCATACTATCTCTTTTATTTTTCATTTGAAGTTGTTTTTTTATAGGTTATATAATATTTGTAATCTTTATATCCATATTAAAACGTGTGACACACATTAGTCTTCTAGCAAATTTAGTTGAATCTTTGGCAAGATTTTTACATGAGTGTAGGGAATTAAATGCATTTTATATCACATACTATAGATCGCTTAGCTTGTGCTCATGTTGGCCACTCAATGATAATCCACTAAAGCAATTCTAAACATAAACTATTAACAAACTTGGTTTAGTATATCTGTTTGACGACATTTTTTTGTTTCAATGCTTAAAAATGCAGGTATTTAAACAAAGGAGATCCAAGAGGAAGAGATTGGGTACCACCAGAATGTGATGTATCCATAAGAGAAGGTTGGTTTTGGCACAAAACACAGTCACCAAAAACCTTAGAACACCTCCTTAAAAATCTACTACAAATCTGTTGGAAGAAACTGTGTTCTTCTCATAAATGTCCCTCCAAATTCCACAGGCTTAATCCCACAAAAAGATGCTCAAGTCCTCAAACAATTCAAAAACACCATTGACAGAATCTTCACCACAAATTTAGCTCAAAATTGCTCTATAAAAGCAAGTAGCCAAAGAGGACAAGAGTTTGGGCCTCAAAATGTAATCGACGATGATCACTTATGGACTTATTGGGCCCCCTAAGGAAGATGTTGATGACCATTGGATTGAGGTCAGAAGTCAAGGGAATGAACAGTTGAGATTCAATGTGGTGAGGATTCAAGAGGCTATAGGGCTTGGTCAGAGGATCGGACGGCATGAGATTTATTTGGATGGGAAGAGGATTGTGGATGAGAGGGAGAGTAGGAGTATTGGGTATAAGAGATTGTACAGGATTAAAAGTGGTGTGGTTTGTGGGTATGCTTTGAAGGTTAGGTTTATTGAGTTTAAGGGTGTTCCTTTGATTTCTTCTTTGGGTCTTCATTTGGACCCTTTTTGGAACCCAATTCGGCTTTCATCAGTACCTACAAATTAAAGGATATGGGGGAGGGGGTGGGGGTCCCTATTTATTAATTTAAACATAAATTATTACATACTTAAATAAAAACAAAGGAGAAATTGTTTTCCTTTTCTTTTGTATTTTTGTACAATTTATGTCAGAGGAAGAAGAGAACTTAGTTATTTATATATATATATATATAATTCCTATTGAAAC

Coding sequence (CDS)

CTTTTAATCTCAAGGATTGTAATATCTCTGTTTGGATTATTTAATTTGTTCATATCTGCAAAAAGAATCTTTTCCCCACAACCCCACCCTCTGTCACTGTCCTCTCATGTGTTCATAGAACACACACAAACAAGCTTCACAATTTTATCGATGGCGAAAATAATGGGTCACCATTGTTCTTCCATCTTCTTCCTCACATTCCTTCATCTCCTCCATTTCTCTTCTCCAAAACTCGAGGTCTCAACGCCACCGCCATTGCCAATCCTCCCACTCCCTTCATTCTCCCAGTTGAAATGGCAACAAAGAGAAGTAATCATGTTCCTTCACTTCGGTCCCAACACTTTCACCGACTCCGAATGGGGCACCGGCGCCGAGTCTCCCGCCATCTTCAACCCCACTGCTCTAAACGCCACCCAGTGGGCTGCCACCGCCGCCGCTGCTGGAATTTCTCTTATGATTCTCACTGCTAAGCACCATGATGGCTTCTGCCTCTGGCCTTCTAAATACACTACACACTCTGTTTCCCGCAGCCCTTGGAAGAATGGCCAAGGCGACGTCGTTGAGGAATTTGTTACCGCCGCTACCGCCCACGGGATCGACGTGGGACTGTATTTGTCGCCGTGGGATCGACATGATCGGAGATATAGCCATGATTTGCCTTACAATGAGTACTACTTGGCTCAGTTACAAGAGCTTCTCAAAAGATATGGAAATGTGAAGGAGATTTGGTTTGATGGAGCCAAAGGCCAAAATGCTCCAAACATGTCATATTATTTCTCAGATTGGTTTGCAATGGTTAAGGAGTTACAAAGCTCCATCAACATATTTTCCGACGCTGGACCAGACGTTCGATGGGTTGGGAACGAGAAAGGTTTTGCAGGAACCTCGTGCTGGTCGACGATCAACCGAACTTCGCTCGCCATTGGAGCAGAAGGCATTACCCCGTATTTAAACAAAGGAGATCCAAGAGGAAGAGATTGGGTACCACCAGAATGTGATGTATCCATAAGAGAAGGCTTAATCCCACAAAAAGATGCTCAAGTCCTCAAACAATTCAAAAACACCATTGACAGAATCTTCACCACAAATTTAGCTCAAAATTGCTCTATAAAAGCAAGTAGCCAAAGAGGACAAGAGTTTGGGCCTCAAAATGTAATCGACGATGATCACTTATGGACTTATTGGGCCCCCTAA

Protein sequence

LLISRIVISLFGLFNLFISAKRIFSPQPHPLSLSSHVFIEHTQTSFTILSMAKIMGHHCSSIFFLTFLHLLHFSSPKLEVSTPPPLPILPLPSFSQLKWQQREVIMFLHFGPNTFTDSEWGTGAESPAIFNPTALNATQWAATAAAAGISLMILTAKHHDGFCLWPSKYTTHSVSRSPWKNGQGDVVEEFVTAATAHGIDVGLYLSPWDRHDRRYSHDLPYNEYYLAQLQELLKRYGNVKEIWFDGAKGQNAPNMSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGITPYLNKGDPRGRDWVPPECDVSIREGLIPQKDAQVLKQFKNTIDRIFTTNLAQNCSIKASSQRGQEFGPQNVIDDDHLWTYWAP

Homology

[Close]

BLAST of Cucsat.G21046 vs. ExPASy Swiss-Prot
Match: Q7XUR3 (Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0560400 PE=3 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 7.7e-31
Identity = 73/186 (39.25%), Postives = 97/186 (52.15%), Query Frame = 0


Query: 1   MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT 60
           M Y F  WFA++ +LQ  + IFSDAGPD RWVG+E G AG +CWS  N++++ IG   I 
Sbjct: 202 MDYMFDAWFALIHQLQQRVVIFSDAGPDTRWVGDEAGVAGYTCWSPFNKSTVTIG-HIIP 261

Query: 61  PYLNKGDPRGRDWVPPECDVSIR------------------------------------- 120
            Y   GDP G+DWVP ECDVSIR                                     
Sbjct: 262 EYSRCGDPFGQDWVPAECDVSIRPGWFWHASEKPKNATTLLDIYYKSVGRNCLLILNVPP 321

Query: 121 --EGLIPQKDAQVLKQFKNTIDRIFTTNLAQNCSIKASSQRG----QEFGPQNVIDDDHL 144
              GLI  +D QVL++F      IF+ N A N ++ AS+ RG    Q+F P NV+ +  +
Sbjct: 322 NSSGLISTEDMQVLQEFTEIRQTIFSQNFAANATVTASTVRGGLGNQQFAPSNVLQES-I 381

[Close]

BLAST of Cucsat.G21046 vs. ExPASy Swiss-Prot
Match: Q8GW72 (Alpha-L-fucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=FUC1 PE=1 SV=2)

HSP 1 Score: 134.4 bits (337), Expect = 1.0e-30
Identity = 72/185 (38.92%), Postives = 100/185 (54.05%), Query Frame = 0


Query: 1   MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT 60
           M Y+F  WF+++ +LQ    IFSDAGPDVRW+G+E G AG++CWS  NRT+  IG +   
Sbjct: 201 MEYFFDTWFSLIHQLQPKAVIFSDAGPDVRWIGDEAGLAGSTCWSLFNRTNAKIG-DTEP 260

Query: 61  PYLNKGDPRGRDWVPPECDVSIR------------------------------------- 120
            Y  +GD  G+DWVP ECDVSIR                                     
Sbjct: 261 SYSQEGDGYGQDWVPAECDVSIRPGWFWHASESPKPAVQLLDIYYNSVGRNCLFLLNVPP 320

Query: 121 --EGLIPQKDAQVLKQFKNTIDRIFTTNLAQNCSIKASSQRG---QEFGPQNVIDDDHLW 144
              GLI ++D +VL++F    + IF+ NLA+   + +SS RG    +FGP+NV+++  L 
Sbjct: 321 NSSGLISEQDIKVLEEFSEMKNSIFSNNLARKAFVNSSSIRGDQSSQFGPKNVLEEG-LD 380

[Close]

BLAST of Cucsat.G21046 vs. NCBI nr
Match: XP_031742278.1 (alpha-L-fucosidase 1 isoform X2 [Cucumis sativus] >KAE8647823.1 hypothetical protein Csa_000518 [Cucumis sativus])

HSP 1 Score: 308 bits (790), Expect = 1.06e-101
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT 60
           MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT
Sbjct: 205 MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT 264

Query: 61  PYLNKGDPRGRDWVPPECDVSIREGLIPQKDAQVLKQFKNTIDRIFTTNLAQNCSIKASS 120
           PYLNKGDPRGRDWVPPECDVSIREGLIPQKDAQVLKQFKNTIDRIFTTNLAQNCSIKASS
Sbjct: 265 PYLNKGDPRGRDWVPPECDVSIREGLIPQKDAQVLKQFKNTIDRIFTTNLAQNCSIKASS 324

Query: 121 QRGQEFGPQNVIDDDHLWTYWAP 143
           QRGQEFGPQNVIDDDHLWTYWAP
Sbjct: 325 QRGQEFGPQNVIDDDHLWTYWAP 347

[Close]

BLAST of Cucsat.G21046 vs. NCBI nr
Match: KAA0042629.1 (alpha-L-fucosidase 1-like [Cucumis melo var. makuwa] >TYK06030.1 alpha-L-fucosidase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 304 bits (778), Expect = 7.30e-100
Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 1   MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT 60
           MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT
Sbjct: 207 MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT 266

Query: 61  PYLNKGDPRGRDWVPPECDVSIREGLIPQKDAQVLKQFKNTIDRIFTTNLAQNCSIKASS 120
            YLNKGDP+GRDWVPPECDVSIREGLIPQKDAQ+LKQFKNTIDRIFTTNLAQNCSIKASS
Sbjct: 267 QYLNKGDPKGRDWVPPECDVSIREGLIPQKDAQILKQFKNTIDRIFTTNLAQNCSIKASS 326

Query: 121 QRGQEFGPQNVIDDDHLWTYWAP 143
           QRGQEFGPQNVIDDDHLWTYWAP
Sbjct: 327 QRGQEFGPQNVIDDDHLWTYWAP 349

[Close]

BLAST of Cucsat.G21046 vs. NCBI nr
Match: XP_004145883.1 (alpha-L-fucosidase 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 289 bits (740), Expect = 1.15e-93
Identity = 143/182 (78.57%), Postives = 143/182 (78.57%), Query Frame = 0


Query: 1   MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT 60
           MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT
Sbjct: 205 MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT 264

Query: 61  PYLNKGDPRGRDWVPPECDVSIREG----------------------------------- 120
           PYLNKGDPRGRDWVPPECDVSIREG                                   
Sbjct: 265 PYLNKGDPRGRDWVPPECDVSIREGWFWHKTQSPKTLEHLLKIYYNSVGRNCVLLINVPP 324

Query: 121 ----LIPQKDAQVLKQFKNTIDRIFTTNLAQNCSIKASSQRGQEFGPQNVIDDDHLWTYW 143
               LIPQKDAQVLKQFKNTIDRIFTTNLAQNCSIKASSQRGQEFGPQNVIDDDHLWTYW
Sbjct: 325 NSTGLIPQKDAQVLKQFKNTIDRIFTTNLAQNCSIKASSQRGQEFGPQNVIDDDHLWTYW 384

[Close]

BLAST of Cucsat.G21046 vs. NCBI nr
Match: XP_008437472.1 (PREDICTED: alpha-L-fucosidase 1-like [Cucumis melo])

HSP 1 Score: 285 bits (728), Expect = 7.79e-92
Identity = 140/182 (76.92%), Postives = 142/182 (78.02%), Query Frame = 0


Query: 1   MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT 60
           MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT
Sbjct: 207 MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT 266

Query: 61  PYLNKGDPRGRDWVPPECDVSIREG----------------------------------- 120
            YLNKGDP+GRDWVPPECDVSIREG                                   
Sbjct: 267 QYLNKGDPKGRDWVPPECDVSIREGWFWHKTQSPKTLKHLLKIYYNSVGRNCVLLINVPP 326

Query: 121 ----LIPQKDAQVLKQFKNTIDRIFTTNLAQNCSIKASSQRGQEFGPQNVIDDDHLWTYW 143
               LIPQKDAQ+LKQFKNTIDRIFTTNLAQNCSIKASSQRGQEFGPQNVIDDDHLWTYW
Sbjct: 327 NSTGLIPQKDAQILKQFKNTIDRIFTTNLAQNCSIKASSQRGQEFGPQNVIDDDHLWTYW 386

[Close]

BLAST of Cucsat.G21046 vs. NCBI nr
Match: XP_038906748.1 (alpha-L-fucosidase 1-like [Benincasa hispida])

HSP 1 Score: 245 bits (626), Expect = 1.48e-76
Identity = 121/185 (65.41%), Postives = 133/185 (71.89%), Query Frame = 0


Query: 1   MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT 60
           MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNE GFAGTSCWSTINRTSLAIGAEGI+
Sbjct: 204 MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNENGFAGTSCWSTINRTSLAIGAEGIS 263

Query: 61  PYLNKGDPRGRDWVPPECDVSIREG----------------------------------- 120
            YLN+GDP+G  W+PPECDVSIR+G                                   
Sbjct: 264 QYLNRGDPKGTHWLPPECDVSIRKGWFWHKRESPKTLKHLLKIYYNSVGRNCVLLINVPP 323

Query: 121 ----LIPQKDAQVLKQFKNTIDRIFTTNLAQNCSIKASSQRGQE---FGPQNVIDDDHLW 143
               LI Q+DA  LKQFK  ID+IFTTNLAQNCS+KASSQRG +   FGP+NV+D+DHLW
Sbjct: 324 NSTGLISQQDANTLKQFKTAIDKIFTTNLAQNCSVKASSQRGGKEGGFGPENVLDNDHLW 383

[Close]

BLAST of Cucsat.G21046 vs. ExPASy TrEMBL
Match: A0A5A7TMP2 (Alpha-L-fucosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001300 PE=3 SV=1)

HSP 1 Score: 304 bits (778), Expect = 3.54e-100
Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 1   MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT 60
           MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT
Sbjct: 207 MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT 266

Query: 61  PYLNKGDPRGRDWVPPECDVSIREGLIPQKDAQVLKQFKNTIDRIFTTNLAQNCSIKASS 120
            YLNKGDP+GRDWVPPECDVSIREGLIPQKDAQ+LKQFKNTIDRIFTTNLAQNCSIKASS
Sbjct: 267 QYLNKGDPKGRDWVPPECDVSIREGLIPQKDAQILKQFKNTIDRIFTTNLAQNCSIKASS 326

Query: 121 QRGQEFGPQNVIDDDHLWTYWAP 143
           QRGQEFGPQNVIDDDHLWTYWAP
Sbjct: 327 QRGQEFGPQNVIDDDHLWTYWAP 349

[Close]

BLAST of Cucsat.G21046 vs. ExPASy TrEMBL
Match: A0A0A0KK59 (Alpha-L-fucosidase OS=Cucumis sativus OX=3659 GN=Csa_5G146320 PE=3 SV=1)

HSP 1 Score: 289 bits (740), Expect = 5.56e-94
Identity = 143/182 (78.57%), Postives = 143/182 (78.57%), Query Frame = 0


Query: 1   MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT 60
           MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT
Sbjct: 205 MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT 264

Query: 61  PYLNKGDPRGRDWVPPECDVSIREG----------------------------------- 120
           PYLNKGDPRGRDWVPPECDVSIREG                                   
Sbjct: 265 PYLNKGDPRGRDWVPPECDVSIREGWFWHKTQSPKTLEHLLKIYYNSVGRNCVLLINVPP 324

Query: 121 ----LIPQKDAQVLKQFKNTIDRIFTTNLAQNCSIKASSQRGQEFGPQNVIDDDHLWTYW 143
               LIPQKDAQVLKQFKNTIDRIFTTNLAQNCSIKASSQRGQEFGPQNVIDDDHLWTYW
Sbjct: 325 NSTGLIPQKDAQVLKQFKNTIDRIFTTNLAQNCSIKASSQRGQEFGPQNVIDDDHLWTYW 384

[Close]

BLAST of Cucsat.G21046 vs. ExPASy TrEMBL
Match: A0A1S3ATS4 (Alpha-L-fucosidase OS=Cucumis melo OX=3656 GN=LOC103482884 PE=3 SV=1)

HSP 1 Score: 285 bits (728), Expect = 3.77e-92
Identity = 140/182 (76.92%), Postives = 142/182 (78.02%), Query Frame = 0


Query: 1   MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT 60
           MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT
Sbjct: 207 MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT 266

Query: 61  PYLNKGDPRGRDWVPPECDVSIREG----------------------------------- 120
            YLNKGDP+GRDWVPPECDVSIREG                                   
Sbjct: 267 QYLNKGDPKGRDWVPPECDVSIREGWFWHKTQSPKTLKHLLKIYYNSVGRNCVLLINVPP 326

Query: 121 ----LIPQKDAQVLKQFKNTIDRIFTTNLAQNCSIKASSQRGQEFGPQNVIDDDHLWTYW 143
               LIPQKDAQ+LKQFKNTIDRIFTTNLAQNCSIKASSQRGQEFGPQNVIDDDHLWTYW
Sbjct: 327 NSTGLIPQKDAQILKQFKNTIDRIFTTNLAQNCSIKASSQRGQEFGPQNVIDDDHLWTYW 386

[Close]

BLAST of Cucsat.G21046 vs. ExPASy TrEMBL
Match: A0A6J1ELW0 (Alpha-L-fucosidase OS=Cucurbita moschata OX=3662 GN=LOC111435799 PE=3 SV=1)

HSP 1 Score: 241 bits (615), Expect = 3.10e-75
Identity = 121/185 (65.41%), Postives = 129/185 (69.73%), Query Frame = 0


Query: 1   MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT 60
           MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGT CWSTINRT LAIGAEGI+
Sbjct: 204 MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTPCWSTINRTLLAIGAEGIS 263

Query: 61  PYLNKGDPRGRDWVPPECDVSIREG----------------------------------- 120
            YLNKGDP+G  WVPPECDVSIR+G                                   
Sbjct: 264 EYLNKGDPKGTHWVPPECDVSIRKGWFWHKSESPKSLNELLKIYYNSVGRNCVLLVNVPP 323

Query: 121 ----LIPQKDAQVLKQFKNTIDRIFTTNLAQNCSIKASSQRGQE---FGPQNVIDDDHLW 143
               LI Q+DA  LKQFK  ID IFTTNLA NCS+KASSQRG +   FGP+NV+D DHLW
Sbjct: 324 NSTGLIAQEDADTLKQFKAAIDTIFTTNLAHNCSVKASSQRGGKEGGFGPENVLDSDHLW 383

[Close]

BLAST of Cucsat.G21046 vs. ExPASy TrEMBL
Match: A0A6J1DPV7 (Alpha-L-fucosidase OS=Momordica charantia OX=3673 GN=LOC111022715 PE=3 SV=1)

HSP 1 Score: 239 bits (609), Expect = 3.22e-74
Identity = 120/185 (64.86%), Postives = 130/185 (70.27%), Query Frame = 0


Query: 1   MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGFAGTSCWSTINRTSLAIGAEGIT 60
           MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKG AGT CWSTINRTSLAIG EGI+
Sbjct: 214 MSYYFSDWFAMVKELQSSINIFSDAGPDVRWVGNEKGSAGTPCWSTINRTSLAIGEEGIS 273

Query: 61  PYLNKGDPRGRDWVPPECDVSIREG----------------------------------- 120
            YL+KGDP+G  WV PECDVSIREG                                   
Sbjct: 274 EYLSKGDPKGTHWVAPECDVSIREGWFWHKSESPKSVKKLLKIYYNSVGRNCVLLINVPP 333

Query: 121 ----LIPQKDAQVLKQFKNTIDRIFTTNLAQNCSIKASSQRGQE---FGPQNVIDDDHLW 143
               LIPQ+DA  LK FK+ ID IF+TNLAQ+CS+KASSQRG +   FGPQNV+DDDHLW
Sbjct: 334 NSTGLIPQQDAHTLKHFKSAIDTIFSTNLAQDCSLKASSQRGGKDGAFGPQNVLDDDHLW 393

The following BLAST results are available for this feature:

BLAST of Cucsat.G21046 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XUR3	7.7e-31	39.25	Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0...	[more]
Q8GW72	1.0e-30	38.92	Alpha-L-fucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=FUC1 PE=1 SV=2	[more]

BLAST of Cucsat.G21046 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031742278.1	1.06e-101	100.00	alpha-L-fucosidase 1 isoform X2 [Cucumis sativus] >KAE8647823.1 hypothetical pro...	[more]
KAA0042629.1	7.30e-100	97.90	alpha-L-fucosidase 1-like [Cucumis melo var. makuwa] >TYK06030.1 alpha-L-fucosid...	[more]
XP_004145883.1	1.15e-93	78.57	alpha-L-fucosidase 1 isoform X1 [Cucumis sativus]	[more]
XP_008437472.1	7.79e-92	76.92	PREDICTED: alpha-L-fucosidase 1-like [Cucumis melo]	[more]
XP_038906748.1	1.48e-76	65.41	alpha-L-fucosidase 1-like [Benincasa hispida]	[more]

BLAST of Cucsat.G21046 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TMP2	3.54e-100	97.90	Alpha-L-fucosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G0...	[more]
A0A0A0KK59	5.56e-94	78.57	Alpha-L-fucosidase OS=Cucumis sativus OX=3659 GN=Csa_5G146320 PE=3 SV=1	[more]
A0A1S3ATS4	3.77e-92	76.92	Alpha-L-fucosidase OS=Cucumis melo OX=3656 GN=LOC103482884 PE=3 SV=1	[more]
A0A6J1ELW0	3.10e-75	65.41	Alpha-L-fucosidase OS=Cucurbita moschata OX=3662 GN=LOC111435799 PE=3 SV=1	[more]
A0A6J1DPV7	3.22e-74	64.86	Alpha-L-fucosidase OS=Momordica charantia OX=3673 GN=LOC111022715 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000933	Glycoside hydrolase, family 29	SMART	SM00812	alpha_l_fucos	coord: 96..378 e-value: 2.1E-10 score: -34.5
IPR000933	Glycoside hydrolase, family 29	PFAM	PF01120	Alpha_L_fucos	coord: 135..368 e-value: 2.7E-26 score: 92.8
IPR000933	Glycoside hydrolase, family 29	PANTHER	PTHR10030	ALPHA-L-FUCOSIDASE	coord: 79..363
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 94..374 e-value: 1.2E-106 score: 358.8
None	No IPR available	PANTHER	PTHR10030:SF37	OS09G0520800 PROTEIN	coord: 79..363
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 92..368

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G21046.T2	Cucsat.G21046.T2	mRNA
Cucsat.G21046.T1	Cucsat.G21046.T1	mRNA
Cucsat.G21046.T3	Cucsat.G21046.T3	mRNA
Cucsat.G21046.T5	Cucsat.G21046.T5	mRNA
Cucsat.G21046.T6	Cucsat.G21046.T6	mRNA
Cucsat.G21046.T4	Cucsat.G21046.T4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006004	fucose metabolic process
biological_process	GO:0016139	glycoside catabolic process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005764	lysosome
molecular_function	GO:0004560	alpha-L-fucosidase activity