Cucsat.G20905 (gene) Cucumber (B10) v3

Overview
NameCucsat.G20905
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionUnknown protein
Locationctg907: 85899 .. 87577 (-)
RNA-Seq ExpressionCucsat.G20905
SyntenyCucsat.G20905
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCTATCATAATCGGACAGAAACCAAACTCTCCCAAAGAGAGGTCTTGGCCTATCGAGCTCATAAAACTCTGTCAAACAGTGCTATTTTGTTCGAGAACTAGTCGCAATAATCAATCAAATTTTTATAGTTCCACACATCCCATAGAAGGAAGGTCGTGACATACGATCCAAACCCTCAATGATCCAACAATTGATAGGGGTCCAACAATCTCTTAAAACATTAGAAAGTACACAAGGCAGGAAAAAAGAATAGCCAAAACATATTTTAGTAAACTTGCACCCCCAAAGAAAAGGACAAACATGTATTTCAACTATAATCAGTTTAATATCTAATTTGCACTCTTTTCTTTATTACTGCACTTTGTTCAAAGTTCAAAATCCTTGTAATGGATTAAAGCTCAGAAAATTCATCTTCAAAGAACTAGTTGATCGGACTCGGATTAAAGTTGAAAACGTCGATGAAAGCGGCTGGCTGCTCTCCGATTAACTGGTGAGTTTCCTTTTCTTTCCCTATTTCTTTCTTTTTGGGATGACAGTAGGGATTTTGGATTCAATTATTTTGCCATTAATTCTGATATTGTATCGATTTCCGATGCCGCATTCACAACTCCGGTTTTGTTGACATGGCGGTTTAGTATCATTGATCGTGCTTGTTCTTGATTGGCTGTTTGCGTTGTTATTCAATGCTGTTGATAGAATCCGTTGAGTTCATAAATCGATATGAAATTTCGCAGGATGAGAAGATCGAATTAGACGCAAGGAAATATCGGGCTCGTAATTGAAGTTCAGCGCGACAGACTTCTTCCAAAAATCGATTCGATTCCATATCAGTTTGAGGACAGCAAGGTGCTTGTAAAAATGCCTCAACGAAATTAGCATAAGAATCAAGAAAGACATCGACTAGGTGTTTGTGAAAATGCCTCAACGAAATTAGCACAAGAATCAAGAAAGACATTGAGTAGGTGTTTGTGAAAATGCCTCAACGAAATAGGCATAAGAGTCAAGAAAGGGAGAGTGTGAACTCAGAAGGAGGAATCGCCGCTTGGAATGTGTTTGACAGTGTGAAGACCACAACGAAGACTCCTGAAGCTCTAATGGGGGAGATCGGTGCTGCAATTTCAAATTTAGAATATGCTCGAACCACTGCGTATTTAGAATCTCCAATATCTCCCGATGAGCCAGAGGATGAGGAACCTAGTGCGAATTCAAGAAGTCAGTATGATGTTCGAATGGCGGATGGAGCTTACAAGGCAGGTTGTAAAGCATTAACCGTTGGTAAGCTTGACGAGGCTCTTCATTCGTTGAATGTTTCTCTTTCGAAATGCCCACCTGAGAAATCATCTGCTGTTGCTAAGATTCAATCTTTGATCTCCCTCACGTCTCAGCAACTTCAGATCAGATCTTCTAATTGCCAAGAAATTTCAGAAGATTGATTGGTTTGATTCAATATATGTTTTCTTCCATCCATATTTGTTCCTCATTCTTTTTCCCTGGATCAGAATCTCTCTCATTGTTCTTTAATAATCATGTTTGACTGTGTGTATATACGTTTTTCATTTGTTCAATTTTCTTTTTTGTAAGCAAGCAAGGACTTGTTTTTCCTTGAGGACGCTTCCTAATATAGCCTATGTCTACCTTTTCTAAATCGATGAAAAAGTAGTAAATTTAAAAATCATGC

Coding sequence (CDS)

ATGCCTCAACGAAATAGGCATAAGAGTCAAGAAAGGGAGAGTGTGAACTCAGAAGGAGGAATCGCCGCTTGGAATGTGTTTGACAGTGTGAAGACCACAACGAAGACTCCTGAAGCTCTAATGGGGGAGATCGGTGCTGCAATTTCAAATTTAGAATATGCTCGAACCACTGCGTATTTAGAATCTCCAATATCTCCCGATGAGCCAGAGGATGAGGAACCTAGTGCGAATTCAAGAAGTCAGTATGATGTTCGAATGGCGGATGGAGCTTACAAGGCAGGTTGTAAAGCATTAACCGTTGGTAAGCTTGACGAGGCTCTTCATTCGTTGAATGTTTCTCTTTCGAAATGCCCACCTGAGAAATCATCTGCTGTTGCTAAGATTCAATCTTTGATCTCCCTCACGTCTCAGCAACTTCAGATCAGATCTTCTAATTGCCAAGAAATTTCAGAAGATTGA

Protein sequence

MPQRNRHKSQERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYLESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPEKSSAVAKIQSLISLTSQQLQIRSSNCQEISED
Homology
[Close]
BLAST of Cucsat.G20905 vs. NCBI nr
Match: XP_011654103.1 (uncharacterized protein LOC101212714 [Cucumis sativus] >KGN55178.1 hypothetical protein Csa_012701 [Cucumis sativus])

HSP 1 Score: 294 bits (753), Expect = 2.91e-100
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 1   MPQRNRHKSQERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYL 60
           MPQRNRHKSQERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYL
Sbjct: 1   MPQRNRHKSQERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYL 60

Query: 61  ESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPE 120
           ESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPE
Sbjct: 61  ESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPE 120

Query: 121 KSSAVAKIQSLISLTSQQLQIRSSNCQEISED 152
           KSSAVAKIQSLISLTSQQLQIRSSNCQEISED
Sbjct: 121 KSSAVAKIQSLISLTSQQLQIRSSNCQEISED 152

[Close]
BLAST of Cucsat.G20905 vs. NCBI nr
Match: XP_008452533.1 (PREDICTED: uncharacterized protein LOC103493531 [Cucumis melo] >KAA0064371.1 uncharacterized protein E6C27_scaffold255G00720 [Cucumis melo var. makuwa] >TYK20216.1 uncharacterized protein E5676_scaffold134G003530 [Cucumis melo var. makuwa])

HSP 1 Score: 258 bits (659), Expect = 5.66e-86
Identity = 136/152 (89.47%), Postives = 140/152 (92.11%), Query Frame = 0 

Query: 1   MPQRNRHKSQERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYL 60
           M QRN HKSQ RESVNSEGGI  WNVFD+VKTTTKTPEALM EI AAISNLEY RT AYL
Sbjct: 1   MHQRNWHKSQGRESVNSEGGITVWNVFDNVKTTTKTPEALMAEINAAISNLEYDRTAAYL 60

Query: 61  ESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPE 120
           ESPISP   EDEEPSANSRSQYDVR+ADGAYKAGCKALT+GKLDEALHSLNVSLSKCPPE
Sbjct: 61  ESPISP---EDEEPSANSRSQYDVRIADGAYKAGCKALTIGKLDEALHSLNVSLSKCPPE 120

Query: 121 KSSAVAKIQSLISLTSQQLQIRSSNCQEISED 152
           KSSAVAKIQSLISLTSQQ+QIRSSNCQEISED
Sbjct: 121 KSSAVAKIQSLISLTSQQIQIRSSNCQEISED 149

[Close]
BLAST of Cucsat.G20905 vs. NCBI nr
Match: XP_038899466.1 (uncharacterized protein LOC120086752 [Benincasa hispida] >XP_038899467.1 uncharacterized protein LOC120086752 [Benincasa hispida])

HSP 1 Score: 228 bits (580), Expect = 7.08e-74
Identity = 123/153 (80.39%), Postives = 135/153 (88.24%), Query Frame = 0 

Query: 1   MPQRNRHKS-QERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAY 60
           MPQR+ HK+ +E E++NS  GIAAWNVFD+VKTTTKTPEALM EI AAISN EYARTTA 
Sbjct: 1   MPQRDWHKNLKEGENMNSGEGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAC 60

Query: 61  LESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPP 120
           L+SPISPD+ ED E SA+ R+QY VRMADG+YKAGC A TVGKLDEALHSLNVSLSKCPP
Sbjct: 61  LQSPISPDDSEDGESSASLRTQYVVRMADGSYKAGCAAPTVGKLDEALHSLNVSLSKCPP 120

Query: 121 EKSSAVAKIQSLISLTSQQLQIRSSNCQEISED 152
           EKSSAVAK+QSLISLTS QLQIRSSN QEISED
Sbjct: 121 EKSSAVAKLQSLISLTSHQLQIRSSNSQEISED 153

[Close]
BLAST of Cucsat.G20905 vs. NCBI nr
Match: KAG6608487.1 (hypothetical protein SDJN03_01829, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 221 bits (564), Expect = 1.87e-71
Identity = 117/153 (76.47%), Postives = 134/153 (87.58%), Query Frame = 0 

Query: 1   MPQRNRHKSQE-RESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAY 60
           MPQR+ HK+ + +E+++S GGIAAWNVFD+VKTTTKTPEAL+ EI  AI+NLEYAR+TA+
Sbjct: 1   MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60

Query: 61  LESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPP 120
           LESPISP  P+D    A+S +QYD R+AD AYKAGC AL VGKLDEALHSLNVSLSKCPP
Sbjct: 61  LESPISPT-PQDRSSGASSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPP 120

Query: 121 EKSSAVAKIQSLISLTSQQLQIRSSNCQEISED 152
           EKSSAVAK+QSLISLTSQQLQIRSSNC EISED
Sbjct: 121 EKSSAVAKLQSLISLTSQQLQIRSSNCHEISED 152

[Close]
BLAST of Cucsat.G20905 vs. NCBI nr
Match: XP_022940904.1 (uncharacterized protein LOC111446352 [Cucurbita moschata])

HSP 1 Score: 218 bits (556), Expect = 3.10e-70
Identity = 115/153 (75.16%), Postives = 133/153 (86.93%), Query Frame = 0 

Query: 1   MPQRNRHKSQE-RESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAY 60
           MPQR+ HK+ + +E+++S GGIAAWNVFD+VKTTTKTPEAL+ EI  AI+NLEYAR+TA+
Sbjct: 1   MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60

Query: 61  LESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPP 120
           LESPISP  P+D     +S +QYD R+AD AYKAGC AL VGKLDEALHSLNVSLSKCPP
Sbjct: 61  LESPISPT-PQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPP 120

Query: 121 EKSSAVAKIQSLISLTSQQLQIRSSNCQEISED 152
           EKSSAVAK+QSLISLTS+QLQIRSSNC EISED
Sbjct: 121 EKSSAVAKLQSLISLTSKQLQIRSSNCHEISED 152

[Close]
BLAST of Cucsat.G20905 vs. ExPASy TrEMBL
Match: A0A0A0L090 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639170 PE=4 SV=1)

HSP 1 Score: 294 bits (753), Expect = 1.41e-100
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 1   MPQRNRHKSQERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYL 60
           MPQRNRHKSQERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYL
Sbjct: 1   MPQRNRHKSQERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYL 60

Query: 61  ESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPE 120
           ESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPE
Sbjct: 61  ESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPE 120

Query: 121 KSSAVAKIQSLISLTSQQLQIRSSNCQEISED 152
           KSSAVAKIQSLISLTSQQLQIRSSNCQEISED
Sbjct: 121 KSSAVAKIQSLISLTSQQLQIRSSNCQEISED 152

[Close]
BLAST of Cucsat.G20905 vs. ExPASy TrEMBL
Match: A0A5A7VF87 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003530 PE=4 SV=1)

HSP 1 Score: 258 bits (659), Expect = 2.74e-86
Identity = 136/152 (89.47%), Postives = 140/152 (92.11%), Query Frame = 0 

Query: 1   MPQRNRHKSQERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYL 60
           M QRN HKSQ RESVNSEGGI  WNVFD+VKTTTKTPEALM EI AAISNLEY RT AYL
Sbjct: 1   MHQRNWHKSQGRESVNSEGGITVWNVFDNVKTTTKTPEALMAEINAAISNLEYDRTAAYL 60

Query: 61  ESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPE 120
           ESPISP   EDEEPSANSRSQYDVR+ADGAYKAGCKALT+GKLDEALHSLNVSLSKCPPE
Sbjct: 61  ESPISP---EDEEPSANSRSQYDVRIADGAYKAGCKALTIGKLDEALHSLNVSLSKCPPE 120

Query: 121 KSSAVAKIQSLISLTSQQLQIRSSNCQEISED 152
           KSSAVAKIQSLISLTSQQ+QIRSSNCQEISED
Sbjct: 121 KSSAVAKIQSLISLTSQQIQIRSSNCQEISED 149

[Close]
BLAST of Cucsat.G20905 vs. ExPASy TrEMBL
Match: A0A1S3BU07 (uncharacterized protein LOC103493531 OS=Cucumis melo OX=3656 GN=LOC103493531 PE=4 SV=1)

HSP 1 Score: 258 bits (659), Expect = 2.74e-86
Identity = 136/152 (89.47%), Postives = 140/152 (92.11%), Query Frame = 0 

Query: 1   MPQRNRHKSQERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYL 60
           M QRN HKSQ RESVNSEGGI  WNVFD+VKTTTKTPEALM EI AAISNLEY RT AYL
Sbjct: 1   MHQRNWHKSQGRESVNSEGGITVWNVFDNVKTTTKTPEALMAEINAAISNLEYDRTAAYL 60

Query: 61  ESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPE 120
           ESPISP   EDEEPSANSRSQYDVR+ADGAYKAGCKALT+GKLDEALHSLNVSLSKCPPE
Sbjct: 61  ESPISP---EDEEPSANSRSQYDVRIADGAYKAGCKALTIGKLDEALHSLNVSLSKCPPE 120

Query: 121 KSSAVAKIQSLISLTSQQLQIRSSNCQEISED 152
           KSSAVAKIQSLISLTSQQ+QIRSSNCQEISED
Sbjct: 121 KSSAVAKIQSLISLTSQQIQIRSSNCQEISED 149

[Close]
BLAST of Cucsat.G20905 vs. ExPASy TrEMBL
Match: A0A6J1FLM9 (uncharacterized protein LOC111446352 OS=Cucurbita moschata OX=3662 GN=LOC111446352 PE=4 SV=1)

HSP 1 Score: 218 bits (556), Expect = 1.50e-70
Identity = 115/153 (75.16%), Postives = 133/153 (86.93%), Query Frame = 0 

Query: 1   MPQRNRHKSQE-RESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAY 60
           MPQR+ HK+ + +E+++S GGIAAWNVFD+VKTTTKTPEAL+ EI  AI+NLEYAR+TA+
Sbjct: 1   MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60

Query: 61  LESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPP 120
           LESPISP  P+D     +S +QYD R+AD AYKAGC AL VGKLDEALHSLNVSLSKCPP
Sbjct: 61  LESPISPT-PQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPP 120

Query: 121 EKSSAVAKIQSLISLTSQQLQIRSSNCQEISED 152
           EKSSAVAK+QSLISLTS+QLQIRSSNC EISED
Sbjct: 121 EKSSAVAKLQSLISLTSKQLQIRSSNCHEISED 152

[Close]
BLAST of Cucsat.G20905 vs. ExPASy TrEMBL
Match: A0A6J1BP49 (uncharacterized protein LOC111026168 OS=Momordica charantia OX=3673 GN=LOC111026168 PE=4 SV=1)

HSP 1 Score: 185 bits (470), Expect = 3.08e-57
Identity = 106/153 (69.28%), Postives = 119/153 (77.78%), Query Frame = 0 

Query: 1   MPQRNRHKS-QERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAY 60
           MP R+  K+ +ERE+V S GGI AWN FD+V  TTKTPEALM EI AAIS +EYARTTA 
Sbjct: 18  MPHRDLPKNPKERENVISVGGIMAWNAFDNVTATTKTPEALMAEINAAISKIEYARTTAC 77

Query: 61  LESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPP 120
           LES  +P   +D    A+   QYD RMAD AYKAGC AL VGKLD+ALHSLNVSLSKCPP
Sbjct: 78  LESA-TPPASQDGGSGASLMPQYDARMADEAYKAGCAALAVGKLDDALHSLNVSLSKCPP 137

Query: 121 EKSSAVAKIQSLISLTSQQLQIRSSNCQEISED 152
           EK+SAVAK+ SLI+LTSQQL  RSSNC EISED
Sbjct: 138 EKTSAVAKLLSLITLTSQQLH-RSSNCSEISED 168

The following BLAST results are available for this feature:
BLAST of Cucsat.G20905 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G20905 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011654103.12.91e-100100.00uncharacterized protein LOC101212714 [Cucumis sativus] >KGN55178.1 hypothetical ... [more]
XP_008452533.15.66e-8689.47PREDICTED: uncharacterized protein LOC103493531 [Cucumis melo] >KAA0064371.1 unc... [more]
XP_038899466.17.08e-7480.39uncharacterized protein LOC120086752 [Benincasa hispida] >XP_038899467.1 unchara... [more]
KAG6608487.11.87e-7176.47hypothetical protein SDJN03_01829, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022940904.13.10e-7075.16uncharacterized protein LOC111446352 [Cucurbita moschata][more]
BLAST of Cucsat.G20905 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0901.41e-100100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639170 PE=4 SV=1[more]
A0A5A7VF872.74e-8689.47Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BU072.74e-8689.47uncharacterized protein LOC103493531 OS=Cucumis melo OX=3656 GN=LOC103493531 PE=... [more]
A0A6J1FLM91.50e-7075.16uncharacterized protein LOC111446352 OS=Cucurbita moschata OX=3662 GN=LOC1114463... [more]
A0A6J1BP493.08e-5769.28uncharacterized protein LOC111026168 OS=Momordica charantia OX=3673 GN=LOC111026... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G20905.T1Cucsat.G20905.T1mRNA