Cucsat.G20229 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G20229
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Glutamate receptor
Location	ctg47: 279405 .. 280042 (+)
RNA-Seq Expression	Cucsat.G20229
Synteny	Cucsat.G20229

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCAAGGAGATAAAAAAGAATGGCAACTCGGTGGGTTTTTTGAACGGTTCCTTTGTGGAAGATTACCTAAAAAAACTTGGATTTAGTGAAACCCAGTTGAAATCCTACGGAAGCCCCGAAGAATATAAGGAAGCCCTAGAAAAAGGAACCAGTAATGGTGGAGTTGCTGCCATTTTTGACGAACTTCCTTACATTAAGGTCTTCCTTGGGAAATATCCTTCTGGCCGCTTTCAAACGATCGGCCCTGTTTACAAAAACGATGGATTTGGTTTTGTGAGTTCTCTCTTTGTTTCTCTTTCATTTTTAACCTAGCTTGTGTGTTTTGGGTTGTTTATGGAAATTAATCTACAGGCCTTCCCAAAAGGATCACCTCTGGTGGCTTACTTTTCGAGAGCAATATTGAATGTGAATGAAGATGTATACAAAATGTCCAAAATTGAGAAGGAATATTTCTCAAATCCAGATGCTCCACCAATCCCAAATTTCAGCGATTCATCTCTGGATGTTCGAAGATTTGGTGGTTTATTCATCATCATGGCACTCGTAAACATGTTGGCATTGTTAATATATATGGTTCAATTCTCTCTCACATATTGGCCCGAGTTGACTCAGTCTTCGTTTACTTTCAAAATGGTTGA

Coding sequence (CDS)

ATCAAGGAGATAAAAAAGAATGGCAACTCGGTGGGTTTTTTGAACGGTTCCTTTGTGGAAGATTACCTAAAAAAACTTGGATTTAGTGAAACCCAGTTGAAATCCTACGGAAGCCCCGAAGAATATAAGGAAGCCCTAGAAAAAGGAACCAGTAATGGTGGAGTTGCTGCCATTTTTGACGAACTTCCTTACATTAAGGTCTTCCTTGGGAAATATCCTTCTGGCCGCTTTCAAACGATCGGCCCTGTTTACAAAAACGATGGATTTGGTTTTGCCTTCCCAAAAGGATCACCTCTGGTGGCTTACTTTTCGAGAGCAATATTGAATGTGAATGAAGATGTATACAAAATGTCCAAAATTGAGAAGGAATATTTCTCAAATCCAGATGCTCCACCAATCCCAAATTTCAGCGATTCATCTCTGGATGTTCGAAGATTTGGTGGTTTATTCATCATCATGGCACTCGTAAACATGTTGGCATTGTTAATATATATGGTTCAATTCTCTCTCACATATTGGCCCGAGTTGACTCAGTCTTCGTTTACTTTCAAAATGGTT

Protein sequence

IKEIKKNGNSVGFLNGSFVEDYLKKLGFSETQLKSYGSPEEYKEALEKGTSNGGVAAIFDELPYIKVFLGKYPSGRFQTIGPVYKNDGFGFAFPKGSPLVAYFSRAILNVNEDVYKMSKIEKEYFSNPDAPPIPNFSDSSLDVRRFGGLFIIMALVNMLALLIYMVQFSLTYWPELTQSSFTFKMV

Homology

[Close]

BLAST of Cucsat.G20229 vs. ExPASy Swiss-Prot
Match: Q9LFN5 (Glutamate receptor 2.5 OS=Arabidopsis thaliana OX=3702 GN=GLR2.5 PE=2 SV=2)

HSP 1 Score: 125.6 bits (314), Expect = 6.0e-28
Identity = 71/165 (43.03%), Postives = 104/165 (63.03%), Query Frame = 0


Query: 3   EIKKNGNSVGFLNGSFVEDYLKKLGFSETQLKSYGSPEEYKEALEKGTSNGGVAAIFDEL 62
           +++K+G ++G+  GSF  + LK++ F E++LK+Y SPEE +E     +SNGG+ A FDE+
Sbjct: 686 DLRKSGVNIGYQTGSFTFERLKQMRFDESRLKTYNSPEEMRELFLHKSSNGGIDAAFDEV 745

Query: 63  PYIKVFLGKYPSGRFQTIGPVYKNDGFGFAFPKGSPLVAYFSRAILNVNEDVYKMSKIEK 122
            YIK+F+ KY S  +  I P +K DGFGFAFP GSPLV+  SR ILN+ E    M  IE 
Sbjct: 746 AYIKLFMAKYCS-EYSIIEPTFKADGFGFAFPLGSPLVSDISRQILNITEG-DAMKAIEN 805

Query: 123 EYFSNPDAPPIPNFSDS--SLDVRRFGGLFIIMALVNMLALLIYM 166
           ++F           SDS   LD   F  LF+I+ +V+++ LL+ +
Sbjct: 806 KWFLGEKHCLDSTTSDSPIQLDHHSFEALFLIVFVVSVILLLLML 848

[Close]

BLAST of Cucsat.G20229 vs. ExPASy Swiss-Prot
Match: Q9C5V5 (Glutamate receptor 2.8 OS=Arabidopsis thaliana OX=3702 GN=GLR2.8 PE=2 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-27
Identity = 70/170 (41.18%), Postives = 107/170 (62.94%), Query Frame = 0


Query: 1   IKEIKKNGNSVGFLNGSFVEDYLKKLGFSETQLKSYGSPEEYKEALEKGTSNGGVAAIFD 60
           +K++ KNG+ VG+ +G+FV+D+L K GF+ ++LK +GS EE    L    SNG ++A FD
Sbjct: 676 VKDLIKNGDYVGYQHGAFVKDFLIKEGFNVSKLKPFGSSEECHALL----SNGSISAAFD 735

Query: 61  ELPYIKVFLGKYPSGRFQTIGPVYKNDGFGFAFPKGSPLVAYFSRAILNVNEDVYKMSKI 120
           E+ Y++  L +Y S ++  + P +K  GFGFAFP+ SPL    S+AILNV +   +M  I
Sbjct: 736 EVAYLRAILSQYCS-KYAIVEPTFKTAGFGFAFPRNSPLTGDVSKAILNVTQG-DEMQHI 795

Query: 121 EKEYFSNPDAPPIPN--FSDSSLDVRRFGGLFIIMALVNMLALLIYMVQF 169
           E ++F   +  P P    S + L +R F GLF+I  + + LALLI++  F
Sbjct: 796 ENKWFMKQNDCPDPKTALSSNRLSLRSFWGLFLIAGIASFLALLIFVFLF 839

[Close]

BLAST of Cucsat.G20229 vs. ExPASy Swiss-Prot
Match: Q9LFN8 (Glutamate receptor 2.6 OS=Arabidopsis thaliana OX=3702 GN=GLR2.6 PE=2 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 6.7e-27
Identity = 70/166 (42.17%), Postives = 102/166 (61.45%), Query Frame = 0


Query: 3   EIKKNGNSVGFLNGSFVEDYLKKLGFSETQLKSYGSPEEYKEALEKGTSNGGVAAIFDEL 62
           +++ +G ++G+  GSF  + LK++G+ E++LK+Y +P+E  E   K +SNGG+ A FDE+
Sbjct: 690 DLRNSGVNIGYQTGSFTFERLKQMGYKESRLKTYDTPQEMHELFLKKSSNGGIDAAFDEV 749

Query: 63  PYIKVFLGKYPSGRFQTIGPVYKNDGFGFAFPKGSPLVAYFSRAILNVNEDVYKMSKIEK 122
            Y+K+F+ KY S ++  I P +K DGFGFAFP GSPLV   SR ILN+ E    M  IE 
Sbjct: 750 AYVKLFMAKYCS-KYTIIEPTFKADGFGFAFPLGSPLVPDLSRQILNITEG-ETMKAIEN 809

Query: 123 EYFSNPDAPPIPNFSDS--SLDVRRFGGLFIIMALVNMLALLIYMV 167
           ++            SDS   LD   F  LF I+ +V+ML LL  +V
Sbjct: 810 KWLLGEKHCLDSTTSDSPIRLDHHSFEALFTIVFVVSMLLLLAMLV 853

[Close]

BLAST of Cucsat.G20229 vs. ExPASy Swiss-Prot
Match: Q8LGN0 (Glutamate receptor 2.7 OS=Arabidopsis thaliana OX=3702 GN=GLR2.7 PE=2 SV=3)

HSP 1 Score: 117.5 bits (293), Expect = 1.6e-25
Identity = 72/169 (42.60%), Postives = 99/169 (58.58%), Query Frame = 0


Query: 2   KEIKKNGNSVGFLNGSFVEDYLKKLGFSETQLKSYGSPEEYKEALEKGTSNGGVAAIFDE 61
           K++ K   ++G+  G+FV + LK  GF E+QLK +GS  E  E      SNG + A FDE
Sbjct: 682 KDLIKFNKNIGYQRGTFVRELLKSQGFDESQLKPFGSAVECDELF----SNGTITASFDE 741

Query: 62  LPYIKVFLGKYPSGRFQTIGPVYKNDGFGFAFPKGSPLVAYFSRAILNVNEDVYKMSKIE 121
           + YIKV L +  S ++  + P +K  GFGF FPK SPL    SRAILNV +   +M  IE
Sbjct: 742 VAYIKVILSQ-NSSKYTMVEPSFKTAGFGFVFPKKSPLTDDVSRAILNVTQG-EEMQHIE 801

Query: 122 KEYFSNPDAPPIPNFSDSS--LDVRRFGGLFIIMALVNMLALLIYMVQF 169
            ++F  P+  P  N S SS  L +  F GLF+I  + + LALLI++  F
Sbjct: 802 NKWFKKPNNCPDLNTSLSSNHLSLSSFWGLFLIAGIASFLALLIFVANF 844

[Close]

BLAST of Cucsat.G20229 vs. ExPASy Swiss-Prot
Match: O04660 (Glutamate receptor 2.1 OS=Arabidopsis thaliana OX=3702 GN=GLR2.1 PE=2 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 2.8e-25
Identity = 73/179 (40.78%), Postives = 103/179 (57.54%), Query Frame = 0


Query: 1   IKEIKKNGNSVGFLNGSFVEDYLKKLGFSETQLKSYGSPEEYKEALEKGTSNGGVAAIFD 60
           I  +   G SVG+   SF+   L+  GFSE  L SYGSPE     L KG + GGV+A+  
Sbjct: 673 INSLLAKGESVGY-QSSFILGRLRDSGFSEASLVSYGSPEHCDALLSKGQAEGGVSAVLM 732

Query: 61  ELPYIKVFLGKYPSGRFQTIGPVYKNDGFGFAFPKGSPLVAYFSRAILNVNEDVYKMSKI 120
           E+PY+++FLG+Y   +++ +   +K DG GF FP GSPLVA  SRAIL V E+  K +++
Sbjct: 733 EVPYVRIFLGQY-CNKYKMVQTPFKVDGLGFVFPIGSPLVADISRAILKV-EESNKANQL 792

Query: 121 EKEYF-----------SNPDAPPIPNFSDSSLDVRRFGGLFIIMALVNMLALLIYMVQF 169
           E  +F           +NPD  P P+ S   L    F  LF++ A+V  +ALL ++ QF
Sbjct: 793 ENAWFKPIDESCPDPLTNPD--PNPSVSFRQLGFDSFWVLFLVAAIVCTMALLKFVYQF 846

[Close]

BLAST of Cucsat.G20229 vs. NCBI nr
Match: KAE8653069.1 (hypothetical protein Csa_020069 [Cucumis sativus])

HSP 1 Score: 372 bits (956), Expect = 1.73e-127
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   IKEIKKNGNSVGFLNGSFVEDYLKKLGFSETQLKSYGSPEEYKEALEKGTSNGGVAAIFD 60
           IKEIKKNGNSVGFLNGSFVEDYLKKLGFSETQLKSYGSPEEYKEALEKGTSNGGVAAIFD
Sbjct: 130 IKEIKKNGNSVGFLNGSFVEDYLKKLGFSETQLKSYGSPEEYKEALEKGTSNGGVAAIFD 189

Query: 61  ELPYIKVFLGKYPSGRFQTIGPVYKNDGFGFAFPKGSPLVAYFSRAILNVNEDVYKMSKI 120
           ELPYIKVFLGKYPSGRFQTIGPVYKNDGFGFAFPKGSPLVAYFSRAILNVNEDVYKMSKI
Sbjct: 190 ELPYIKVFLGKYPSGRFQTIGPVYKNDGFGFAFPKGSPLVAYFSRAILNVNEDVYKMSKI 249

Query: 121 EKEYFSNPDAPPIPNFSDSSLDVRRFGGLFIIMALVNMLALLIYMVQFSLTYWPELTQSS 180
           EKEYFSNPDAPPIPNFSDSSLDVRRFGGLFIIMALVNMLALLIYMVQFSLTYWPELTQSS
Sbjct: 250 EKEYFSNPDAPPIPNFSDSSLDVRRFGGLFIIMALVNMLALLIYMVQFSLTYWPELTQSS 309

Query: 181 FTFKMV 186
           FTFKMV
Sbjct: 310 FTFKMV 315

[Close]

BLAST of Cucsat.G20229 vs. NCBI nr
Match: XP_016901396.1 (PREDICTED: glutamate receptor 2.8-like isoform X2 [Cucumis melo])

HSP 1 Score: 208 bits (529), Expect = 1.82e-60
Identity = 110/190 (57.89%), Postives = 140/190 (73.68%), Query Frame = 0


Query: 1   IKEIKKNGNSVGFLNGSFVEDYL-KKLGFSETQLKSYGSPEEYKEALEKGTSNGGVAAIF 60
           + EI++ G  VG+ N SFV  +L  +L  +ET+LK YG+P+E+KEAL +G ++GGVAAIF
Sbjct: 315 VNEIREKGYYVGYQNDSFVRSFLITQLLLNETKLKPYGNPDEFKEALIRGNNDGGVAAIF 374

Query: 61  DELPYIKVFLGKYPSGRFQTIGPVYKNDGFGFAFPKGSPLVAYFSRAILNVNEDVYKMSK 120
           DE+PY+KVFL + PSG F+ +GP Y   G GFAFPKGSPL  YFSRAILNV ED  KM K
Sbjct: 375 DEIPYVKVFLRRNPSG-FRMVGPTYATGGLGFAFPKGSPLATYFSRAILNVTEDKDKMKK 434

Query: 121 IEKEYFSNPDAPPIPNFSDSSLDVRRFGGLFIIMALVNMLALLIYMVQFSLTYWPELT-- 180
           IE  YF N D PPIP+ +DS LDVR FGGLFII  + N L+LLIY++QF LT+  + T  
Sbjct: 435 IENRYFLNEDDPPIPDSNDSPLDVRGFGGLFIITIVANSLSLLIYLIQFFLTHELDSTGY 494

Query: 181 -QSSFTFKMV 186
            +S+FT K+V
Sbjct: 495 VESTFTSKLV 503

[Close]

BLAST of Cucsat.G20229 vs. NCBI nr
Match: XP_008453654.1 (PREDICTED: glutamate receptor 2.7-like [Cucumis melo])

HSP 1 Score: 207 bits (526), Expect = 1.28e-59
Identity = 109/188 (57.98%), Postives = 141/188 (75.00%), Query Frame = 0


Query: 3   EIKKNGNSVGFLNGSFVEDYL-KKLGFSETQLKSYGSPEEYKEALEKGTSNGGVAAIFDE 62
           E++KN   VG+   SFV  +L  +L F+ETQL++YG+P+++KEAL +G SNGGVAAIFDE
Sbjct: 372 EMRKNEVFVGYQKDSFVRSFLITQLHFAETQLRAYGNPDDFKEALNRGISNGGVAAIFDE 431

Query: 63  LPYIKVFLGKYPSGRFQTIGPVYKNDGFGFAFPKGSPLVAYFSRAILNVNEDVYKMSKIE 122
           +PYIKVFL + PSG F+ +GP Y   G GFAFPKGSPLV YFSRAILNV ED   M+ IE
Sbjct: 432 IPYIKVFLRRNPSG-FRMVGPTYPTGGLGFAFPKGSPLVTYFSRAILNVTEDKVHMNGIE 491

Query: 123 KEYFSNPDAPPIPNFSDSSLDVRRFGGLFIIMALVNMLALLIYMVQFSLTYWPELT---Q 182
            +Y  N +APPIP+ +DS LDVRRFGGLFII  + N L+LLIY++QF LT+  + T   +
Sbjct: 492 NKYLLNENAPPIPDSTDSPLDVRRFGGLFIITIVANSLSLLIYLIQFFLTHELDSTGYVE 551

Query: 183 SSFTFKMV 186
           S+F  ++V
Sbjct: 552 STFASRLV 558

[Close]

BLAST of Cucsat.G20229 vs. NCBI nr
Match: XP_016899785.1 (PREDICTED: glutamate receptor 2.7-like isoform X2 [Cucumis melo] >TYJ95951.1 glutamate receptor 2.7-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 209 bits (533), Expect = 1.92e-59
Identity = 113/186 (60.75%), Postives = 138/186 (74.19%), Query Frame = 0


Query: 3   EIKKNGNSVGFLNGSFVEDYL-KKLGFSETQLKSYGSPEEYKEALEKGTSNGGVAAIFDE 62
           EI++ G  VG+ NGSFV+ +L  +L F ET LK+YGSP+E+KEAL +G  +GGVAAIFDE
Sbjct: 628 EIREKGYFVGYQNGSFVKSFLITQLQFEETNLKAYGSPDEFKEALNRGIKDGGVAAIFDE 687

Query: 63  LPYIKVFLGKYPSGRFQTIGPVYKNDGFGFAFPKGSPLVAYFSRAILNVNEDVYKMSKIE 122
           +PYIKVFL KYPSG ++ +GP Y   G GFAFPKGSPLVAYFSRAILNV ED  KM  IE
Sbjct: 688 IPYIKVFLRKYPSG-YRMVGPTYPTGGLGFAFPKGSPLVAYFSRAILNVTEDKDKMRAIE 747

Query: 123 KEYFSNPDAPPIPNFSDSSLDVRRFGGLFIIMALVNMLALLIYMVQFSLTYWPELT--QS 182
            +YFS+ D+   P   DS+L+V RFGGLFII A+    ALLIY+ QF LT+WP+ +  QS
Sbjct: 748 SKYFSS-DSEDTPRTPDSALNVYRFGGLFIITAVATWSALLIYLTQFLLTHWPDSSNDQS 807

Query: 183 SFTFKM 185
            F  KM
Sbjct: 808 PFASKM 811

[Close]

BLAST of Cucsat.G20229 vs. NCBI nr
Match: KAA0035129.1 (glutamate receptor 2.7-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 209 bits (533), Expect = 2.03e-59
Identity = 113/186 (60.75%), Postives = 138/186 (74.19%), Query Frame = 0


Query: 3   EIKKNGNSVGFLNGSFVEDYL-KKLGFSETQLKSYGSPEEYKEALEKGTSNGGVAAIFDE 62
           EI++ G  VG+ NGSFV+ +L  +L F ET LK+YGSP+E+KEAL +G  +GGVAAIFDE
Sbjct: 635 EIREKGYFVGYQNGSFVKSFLITQLQFEETNLKAYGSPDEFKEALNRGIKDGGVAAIFDE 694

Query: 63  LPYIKVFLGKYPSGRFQTIGPVYKNDGFGFAFPKGSPLVAYFSRAILNVNEDVYKMSKIE 122
           +PYIKVFL KYPSG ++ +GP Y   G GFAFPKGSPLVAYFSRAILNV ED  KM  IE
Sbjct: 695 IPYIKVFLRKYPSG-YRMVGPTYPTGGLGFAFPKGSPLVAYFSRAILNVTEDKDKMRAIE 754

Query: 123 KEYFSNPDAPPIPNFSDSSLDVRRFGGLFIIMALVNMLALLIYMVQFSLTYWPELT--QS 182
            +YFS+ D+   P   DS+L+V RFGGLFII A+    ALLIY+ QF LT+WP+ +  QS
Sbjct: 755 SKYFSS-DSEDTPRTPDSALNVYRFGGLFIITAVATWSALLIYLTQFLLTHWPDSSNDQS 814

Query: 183 SFTFKM 185
            F  KM
Sbjct: 815 PFASKM 818

[Close]

BLAST of Cucsat.G20229 vs. ExPASy TrEMBL
Match: A0A1S4DZK1 (glutamate receptor 2.8-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494308 PE=4 SV=1)

HSP 1 Score: 208 bits (529), Expect = 8.80e-61
Identity = 110/190 (57.89%), Postives = 140/190 (73.68%), Query Frame = 0


Query: 1   IKEIKKNGNSVGFLNGSFVEDYL-KKLGFSETQLKSYGSPEEYKEALEKGTSNGGVAAIF 60
           + EI++ G  VG+ N SFV  +L  +L  +ET+LK YG+P+E+KEAL +G ++GGVAAIF
Sbjct: 315 VNEIREKGYYVGYQNDSFVRSFLITQLLLNETKLKPYGNPDEFKEALIRGNNDGGVAAIF 374

Query: 61  DELPYIKVFLGKYPSGRFQTIGPVYKNDGFGFAFPKGSPLVAYFSRAILNVNEDVYKMSK 120
           DE+PY+KVFL + PSG F+ +GP Y   G GFAFPKGSPL  YFSRAILNV ED  KM K
Sbjct: 375 DEIPYVKVFLRRNPSG-FRMVGPTYATGGLGFAFPKGSPLATYFSRAILNVTEDKDKMKK 434

Query: 121 IEKEYFSNPDAPPIPNFSDSSLDVRRFGGLFIIMALVNMLALLIYMVQFSLTYWPELT-- 180
           IE  YF N D PPIP+ +DS LDVR FGGLFII  + N L+LLIY++QF LT+  + T  
Sbjct: 435 IENRYFLNEDDPPIPDSNDSPLDVRGFGGLFIITIVANSLSLLIYLIQFFLTHELDSTGY 494

Query: 181 -QSSFTFKMV 186
            +S+FT K+V
Sbjct: 495 VESTFTSKLV 503

[Close]

BLAST of Cucsat.G20229 vs. ExPASy TrEMBL
Match: A0A1S3BXK3 (glutamate receptor 2.7-like OS=Cucumis melo OX=3656 GN=LOC103494306 PE=3 SV=1)

HSP 1 Score: 207 bits (526), Expect = 6.21e-60
Identity = 109/188 (57.98%), Postives = 141/188 (75.00%), Query Frame = 0


Query: 3   EIKKNGNSVGFLNGSFVEDYL-KKLGFSETQLKSYGSPEEYKEALEKGTSNGGVAAIFDE 62
           E++KN   VG+   SFV  +L  +L F+ETQL++YG+P+++KEAL +G SNGGVAAIFDE
Sbjct: 372 EMRKNEVFVGYQKDSFVRSFLITQLHFAETQLRAYGNPDDFKEALNRGISNGGVAAIFDE 431

Query: 63  LPYIKVFLGKYPSGRFQTIGPVYKNDGFGFAFPKGSPLVAYFSRAILNVNEDVYKMSKIE 122
           +PYIKVFL + PSG F+ +GP Y   G GFAFPKGSPLV YFSRAILNV ED   M+ IE
Sbjct: 432 IPYIKVFLRRNPSG-FRMVGPTYPTGGLGFAFPKGSPLVTYFSRAILNVTEDKVHMNGIE 491

Query: 123 KEYFSNPDAPPIPNFSDSSLDVRRFGGLFIIMALVNMLALLIYMVQFSLTYWPELT---Q 182
            +Y  N +APPIP+ +DS LDVRRFGGLFII  + N L+LLIY++QF LT+  + T   +
Sbjct: 492 NKYLLNENAPPIPDSTDSPLDVRRFGGLFIITIVANSLSLLIYLIQFFLTHELDSTGYVE 551

Query: 183 SSFTFKMV 186
           S+F  ++V
Sbjct: 552 STFASRLV 558

[Close]

BLAST of Cucsat.G20229 vs. ExPASy TrEMBL
Match: A0A5D3BBF8 (Glutamate receptor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00130 PE=3 SV=1)

HSP 1 Score: 209 bits (533), Expect = 9.28e-60
Identity = 113/186 (60.75%), Postives = 138/186 (74.19%), Query Frame = 0


Query: 3   EIKKNGNSVGFLNGSFVEDYL-KKLGFSETQLKSYGSPEEYKEALEKGTSNGGVAAIFDE 62
           EI++ G  VG+ NGSFV+ +L  +L F ET LK+YGSP+E+KEAL +G  +GGVAAIFDE
Sbjct: 628 EIREKGYFVGYQNGSFVKSFLITQLQFEETNLKAYGSPDEFKEALNRGIKDGGVAAIFDE 687

Query: 63  LPYIKVFLGKYPSGRFQTIGPVYKNDGFGFAFPKGSPLVAYFSRAILNVNEDVYKMSKIE 122
           +PYIKVFL KYPSG ++ +GP Y   G GFAFPKGSPLVAYFSRAILNV ED  KM  IE
Sbjct: 688 IPYIKVFLRKYPSG-YRMVGPTYPTGGLGFAFPKGSPLVAYFSRAILNVTEDKDKMRAIE 747

Query: 123 KEYFSNPDAPPIPNFSDSSLDVRRFGGLFIIMALVNMLALLIYMVQFSLTYWPELT--QS 182
            +YFS+ D+   P   DS+L+V RFGGLFII A+    ALLIY+ QF LT+WP+ +  QS
Sbjct: 748 SKYFSS-DSEDTPRTPDSALNVYRFGGLFIITAVATWSALLIYLTQFLLTHWPDSSNDQS 807

Query: 183 SFTFKM 185
            F  KM
Sbjct: 808 PFASKM 811

[Close]

BLAST of Cucsat.G20229 vs. ExPASy TrEMBL
Match: A0A1S4DVP1 (Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103487307 PE=3 SV=1)

HSP 1 Score: 209 bits (533), Expect = 9.28e-60
Identity = 113/186 (60.75%), Postives = 138/186 (74.19%), Query Frame = 0


Query: 3   EIKKNGNSVGFLNGSFVEDYL-KKLGFSETQLKSYGSPEEYKEALEKGTSNGGVAAIFDE 62
           EI++ G  VG+ NGSFV+ +L  +L F ET LK+YGSP+E+KEAL +G  +GGVAAIFDE
Sbjct: 628 EIREKGYFVGYQNGSFVKSFLITQLQFEETNLKAYGSPDEFKEALNRGIKDGGVAAIFDE 687

Query: 63  LPYIKVFLGKYPSGRFQTIGPVYKNDGFGFAFPKGSPLVAYFSRAILNVNEDVYKMSKIE 122
           +PYIKVFL KYPSG ++ +GP Y   G GFAFPKGSPLVAYFSRAILNV ED  KM  IE
Sbjct: 688 IPYIKVFLRKYPSG-YRMVGPTYPTGGLGFAFPKGSPLVAYFSRAILNVTEDKDKMRAIE 747

Query: 123 KEYFSNPDAPPIPNFSDSSLDVRRFGGLFIIMALVNMLALLIYMVQFSLTYWPELT--QS 182
            +YFS+ D+   P   DS+L+V RFGGLFII A+    ALLIY+ QF LT+WP+ +  QS
Sbjct: 748 SKYFSS-DSEDTPRTPDSALNVYRFGGLFIITAVATWSALLIYLTQFLLTHWPDSSNDQS 807

Query: 183 SFTFKM 185
            F  KM
Sbjct: 808 PFASKM 811

[Close]

BLAST of Cucsat.G20229 vs. ExPASy TrEMBL
Match: A0A5A7T198 (Glutamate receptor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002120 PE=3 SV=1)

HSP 1 Score: 209 bits (533), Expect = 9.81e-60
Identity = 113/186 (60.75%), Postives = 138/186 (74.19%), Query Frame = 0


Query: 3   EIKKNGNSVGFLNGSFVEDYL-KKLGFSETQLKSYGSPEEYKEALEKGTSNGGVAAIFDE 62
           EI++ G  VG+ NGSFV+ +L  +L F ET LK+YGSP+E+KEAL +G  +GGVAAIFDE
Sbjct: 635 EIREKGYFVGYQNGSFVKSFLITQLQFEETNLKAYGSPDEFKEALNRGIKDGGVAAIFDE 694

Query: 63  LPYIKVFLGKYPSGRFQTIGPVYKNDGFGFAFPKGSPLVAYFSRAILNVNEDVYKMSKIE 122
           +PYIKVFL KYPSG ++ +GP Y   G GFAFPKGSPLVAYFSRAILNV ED  KM  IE
Sbjct: 695 IPYIKVFLRKYPSG-YRMVGPTYPTGGLGFAFPKGSPLVAYFSRAILNVTEDKDKMRAIE 754

Query: 123 KEYFSNPDAPPIPNFSDSSLDVRRFGGLFIIMALVNMLALLIYMVQFSLTYWPELT--QS 182
            +YFS+ D+   P   DS+L+V RFGGLFII A+    ALLIY+ QF LT+WP+ +  QS
Sbjct: 755 SKYFSS-DSEDTPRTPDSALNVYRFGGLFIITAVATWSALLIYLTQFLLTHWPDSSNDQS 814

Query: 183 SFTFKM 185
            F  KM
Sbjct: 815 PFASKM 818

The following BLAST results are available for this feature:

BLAST of Cucsat.G20229 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFN5	6.0e-28	43.03	Glutamate receptor 2.5 OS=Arabidopsis thaliana OX=3702 GN=GLR2.5 PE=2 SV=2	[more]
Q9C5V5	1.3e-27	41.18	Glutamate receptor 2.8 OS=Arabidopsis thaliana OX=3702 GN=GLR2.8 PE=2 SV=2	[more]
Q9LFN8	6.7e-27	42.17	Glutamate receptor 2.6 OS=Arabidopsis thaliana OX=3702 GN=GLR2.6 PE=2 SV=2	[more]
Q8LGN0	1.6e-25	42.60	Glutamate receptor 2.7 OS=Arabidopsis thaliana OX=3702 GN=GLR2.7 PE=2 SV=3	[more]
O04660	2.8e-25	40.78	Glutamate receptor 2.1 OS=Arabidopsis thaliana OX=3702 GN=GLR2.1 PE=2 SV=2	[more]

BLAST of Cucsat.G20229 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8653069.1	1.73e-127	100.00	hypothetical protein Csa_020069 [Cucumis sativus]	[more]
XP_016901396.1	1.82e-60	57.89	PREDICTED: glutamate receptor 2.8-like isoform X2 [Cucumis melo]	[more]
XP_008453654.1	1.28e-59	57.98	PREDICTED: glutamate receptor 2.7-like [Cucumis melo]	[more]
XP_016899785.1	1.92e-59	60.75	PREDICTED: glutamate receptor 2.7-like isoform X2 [Cucumis melo] >TYJ95951.1 glu...	[more]
KAA0035129.1	2.03e-59	60.75	glutamate receptor 2.7-like isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G20229 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DZK1	8.80e-61	57.89	glutamate receptor 2.8-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494308 P...	[more]
A0A1S3BXK3	6.21e-60	57.98	glutamate receptor 2.7-like OS=Cucumis melo OX=3656 GN=LOC103494306 PE=3 SV=1	[more]
A0A5D3BBF8	9.28e-60	60.75	Glutamate receptor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G0...	[more]
A0A1S4DVP1	9.28e-60	60.75	Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103487307 PE=3 SV=1	[more]
A0A5A7T198	9.81e-60	60.75	Glutamate receptor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G00...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.190.10		coord: 7..87 e-value: 5.7E-11 score: 44.3
None	No IPR available	GENE3D	3.40.190.10		coord: 88..125 e-value: 5.7E-11 score: 44.3
None	No IPR available	PANTHER	PTHR18966	IONOTROPIC GLUTAMATE RECEPTOR	coord: 1..173
None	No IPR available	PANTHER	PTHR18966:SF374	GLUTAMATE RECEPTOR	coord: 1..173
None	No IPR available	SUPERFAMILY	53850	Periplasmic binding protein-like II	coord: 8..126
IPR001638	Solute-binding protein family 3/N-terminal domain of MltF	PFAM	PF00497	SBP_bac_3	coord: 7..126 e-value: 5.0E-9 score: 35.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G20229.T1	Cucsat.G20229.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0006811	ion transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0015276	ligand-gated ion channel activity