Cucsat.G19903 (gene) Cucumber (B10) v3

Overview
NameCucsat.G19903
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionHeavy metal-associated isoprenylated plant protein 36
Locationctg4: 3038916 .. 3040770 (+)
RNA-Seq ExpressionCucsat.G19903
SyntenyCucsat.G19903
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAATATTGCCTTCATTTCAGTATTTGATTCTCCTTCTTTATGTAGAAACTGCTTTTTTTCAAATTATTTTCACTTATTCCTCTTTCAAAGGCGTCTCCATTCATTCCAAAAAGAAAAAAAAAGAAATGCTTGAATTACCCTCAAAGGCATCTAATCCTCCACAATCTCTCCCGAGAACAGAGCAGCTGATCAAAGCTTCAGTGCCTTTAATGGCAGAACAAGAACCCAAGCCTGAGCCTAAAGAAGTTGAAGAAAATCTGGACCCTCCTCTCATTTACAAGGTACTCCAACATTTTTTCGTCTTCTTCCTTCGCTCACTATATGCCTTGATTTTCTTGACGCTTTGTGTAATTTGTCATGTTCTTGTTCTGTTTTCCAGACGTGGGTTTTGAAAGTCTCCATTCATTGCGAAGCCTGCAAGAGGAAAGTTAAACGAGTTCTCAAGGACATTGAAGGTTAATTTCGATGTTTTTTTTTTTTGTCCTTCCTCTGTATCTATCTCGATTCGTGTTCGTACTGCGATTTTCTGTTTTGCGAATTCGGTAATATTCTTTTGGTAATGAATTCAAATAAAGTTTTTTTTTACTATCTGCTCTGGCGTTCTTAACATTCTGGTTTTTGTTCAGTTTCTTGTATTGTTCTCTCTATGTAACTCGCTGTTTTCTATTTGCTAGGATTTAATCTACTATTTCTTTGTAGAATCGTTACCTTCTTCATGATTTTTCTTTGGAACGTGGACTGGAGAATATCTGTTTAATTATGAATGTGACTTTTCAGGAGTATATGAAACGGATATCGATTTAAAGCAACAGAAAGTTGTTGTGAAAGGTAACGTCGAATCAGAAACTTTGATAAAGAAATTGTTGAAGACAGGGAAGCACGCGGAGCTATGGCCGGAAAAAGGAAAAAGTAAAGGAAAGTCGAAGAAGAAAGAGAAACATAGCGATTCCGAAAGCTCCGATGAAAGCAGCGGCCATGAAGACGAAAAAGACAGAGTGAAATTCGATGTACAGGATCCGAAGAAAAATGGAGACCCGACTGGGAAGATCATCGACGGCGGCGGCGACAGTCAAGCCAAACAGCCTGGTCCTGCACCGGCCGGTGATGGCCAGACCGGCGGCAGTGCAGGTAAGAAAAAGAAGAAGAAAAAGAAGAAGAAGAGCGGCGGAGGTGGCGGCGGCAATGCCGGCGGTGAAGCTCCCGTCGATCCTCCAGCAAATGGAGCGCCACCGTCCGAACCAAATCCGGGTCATTCGGATACCGGTCCACATCCTGTAGCCGGTCCGGTTCCGGTTCCGATTGTAGTGAATGAGAGCCCTACACGTCACTATGTGACTCAATATCAACCGCATTACATTCCGCACCCAGTTTATTCAGTGCGGTACAGTACAGCATACGCCATGAGTTCTCAGCCACGGCGCGAATCATATTATGCCACGCCGCAACAACATTCGTATGCGTACGTGCATCCAGGTGTACGGCCTGAGACTGATTCTCCACCGTCTGATTTTGAGCCATATTCATCACAGCCGTCTGATTCTCTGGAGATATTCAGTGATGAAAATCCGAATGGGTGCTCAATCGTGTGAGGCAATTTAAAATTTTTGCTCCGAAATGACCATATTGGACAGCGTAAGTGCAAGGTCTTTTAAACTAATTTAGGAGTATTTAGAGGGGTAATTATGTAATGTACAGGTGGCTTTTGTTTTGATATCAAACACATTTTGTAATGCTATTGCTTATGCTACATTTTCAAAGGGTTTGAATTTGAGCGTATCCGAAGCTACATGCCTACACCTATATATATATATATAGAAAATAATTACACTTTGTTCTATATCCATACATAAAATAATTTCAATTTCGAAAAACGAAGATAGTTGTTTAATGAAGTTAATATGTGAGTGTCTCTTCC

Coding sequence (CDS)

CAAATATTGCCTTCATTTCAGTATTTGATTCTCCTTCTTTATGTAGAAACTGCTTTTTTTCAAATTATTTTCACTTATTCCTCTTTCAAAGGCGTCTCCATTCATTCCAAAAAGAAAAAAAAAGAAATGCTTGAATTACCCTCAAAGGCATCTAATCCTCCACAATCTCTCCCGAGAACAGAGCAGCTGATCAAAGCTTCAGTGCCTTTAATGGCAGAACAAGAACCCAAGCCTGAGCCTAAAGAAGTTGAAGAAAATCTGGACCCTCCTCTCATTTACAAGACGTGGGTTTTGAAAGTCTCCATTCATTGCGAAGCCTGCAAGAGGAAAGTTAAACGAGTTCTCAAGGACATTGAAGGAGTATATGAAACGGATATCGATTTAAAGCAACAGAAAGTTGTTGTGAAAGGTAACGTCGAATCAGAAACTTTGATAAAGAAATTGTTGAAGACAGGGAAGCACGCGGAGCTATGGCCGGAAAAAGGAAAAAGTAAAGGAAAGTCGAAGAAGAAAGAGAAACATAGCGATTCCGAAAGCTCCGATGAAAGCAGCGGCCATGAAGACGAAAAAGACAGAGTGAAATTCGATGTACAGGATCCGAAGAAAAATGGAGACCCGACTGGGAAGATCATCGACGGCGGCGGCGACAGTCAAGCCAAACAGCCTGGTCCTGCACCGGCCGGTGATGGCCAGACCGGCGGCAGTGCAGGTAAGAAAAAGAAGAAGAAAAAGAAGAAGAAGAGCGGCGGAGGTGGCGGCGGCAATGCCGGCGGTGAAGCTCCCGTCGATCCTCCAGCAAATGGAGCGCCACCGTCCGAACCAAATCCGGGTCATTCGGATACCGGTCCACATCCTGTAGCCGGTCCGGTTCCGGTTCCGATTGTAGTGAATGAGAGCCCTACACGTCACTATGTGACTCAATATCAACCGCATTACATTCCGCACCCAGTTTATTCAGTGCGGTACAGTACAGCATACGCCATGAGTTCTCAGCCACGGCGCGAATCATATTATGCCACGCCGCAACAACATTCGTATGCGTACGTGCATCCAGGTGTACGGCCTGAGACTGATTCTCCACCGTCTGATTTTGAGCCATATTCATCACAGCCGTCTGATTCTCTGGAGATATTCAGTGATGAAAATCCGAATGGGTGCTCAATCGTGTGA

Protein sequence

QILPSFQYLILLLYVETAFFQIIFTYSSFKGVSIHSKKKKKEMLELPSKASNPPQSLPRTEQLIKASVPLMAEQEPKPEPKEVEENLDPPLIYKTWVLKVSIHCEACKRKVKRVLKDIEGVYETDIDLKQQKVVVKGNVESETLIKKLLKTGKHAELWPEKGKSKGKSKKKEKHSDSESSDESSGHEDEKDRVKFDVQDPKKNGDPTGKIIDGGGDSQAKQPGPAPAGDGQTGGSAGKKKKKKKKKKSGGGGGGNAGGEAPVDPPANGAPPSEPNPGHSDTGPHPVAGPVPVPIVVNESPTRHYVTQYQPHYIPHPVYSVRYSTAYAMSSQPRRESYYATPQQHSYAYVHPGVRPETDSPPSDFEPYSSQPSDSLEIFSDENPNGCSIV
Homology
[Close]
BLAST of Cucsat.G19903 vs. NCBI nr
Match: XP_004144820.2 (heavy metal-associated isoprenylated plant protein 36 [Cucumis sativus] >KGN60953.1 hypothetical protein Csa_021268 [Cucumis sativus])

HSP 1 Score: 102 bits (254), Expect = 3.01e-23
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 27 MLELPSKASNPPQSLPRTEQLIKASVPLMAEQEPKPEPKEVEENLDPPLIYK 78
          MLELPSKASNPPQSLPRTEQLIKASVPLMAEQEPKPEPKEVEENLDPPLIYK
Sbjct: 1  MLELPSKASNPPQSLPRTEQLIKASVPLMAEQEPKPEPKEVEENLDPPLIYK 52

[Close]
BLAST of Cucsat.G19903 vs. NCBI nr
Match: KAA0048026.1 (heavy metal-associated isoprenylated plant protein 36 [Cucumis melo var. makuwa])

HSP 1 Score: 89.4 bits (220), Expect = 2.32e-18
Identity = 48/52 (92.31%), Postives = 49/52 (94.23%), Query Frame = 0 

Query: 27 MLELPSKASNPPQSLPRTEQLIKASVPLMAEQEPKPEPKEVEENLDPPLIYK 78
          MLELPSKASNPPQSL RTEQL K SVPLMAEQEPKPEPKEVEENL+PPLIYK
Sbjct: 1  MLELPSKASNPPQSLSRTEQL-KPSVPLMAEQEPKPEPKEVEENLEPPLIYK 51

[Close]
BLAST of Cucsat.G19903 vs. NCBI nr
Match: XP_008454249.1 (PREDICTED: uncharacterized protein LOC103494708 [Cucumis melo])

HSP 1 Score: 89.4 bits (220), Expect = 2.32e-18
Identity = 48/52 (92.31%), Postives = 49/52 (94.23%), Query Frame = 0 

Query: 27 MLELPSKASNPPQSLPRTEQLIKASVPLMAEQEPKPEPKEVEENLDPPLIYK 78
          MLELPSKASNPPQSL RTEQL K SVPLMAEQEPKPEPKEVEENL+PPLIYK
Sbjct: 1  MLELPSKASNPPQSLSRTEQL-KPSVPLMAEQEPKPEPKEVEENLEPPLIYK 51

[Close]
BLAST of Cucsat.G19903 vs. NCBI nr
Match: TYK13793.1 (heavy metal-associated isoprenylated plant protein 36 [Cucumis melo var. makuwa])

HSP 1 Score: 89.4 bits (220), Expect = 2.32e-18
Identity = 48/52 (92.31%), Postives = 49/52 (94.23%), Query Frame = 0 

Query: 27 MLELPSKASNPPQSLPRTEQLIKASVPLMAEQEPKPEPKEVEENLDPPLIYK 78
          MLELPSKASNPPQSL RTEQL K SVPLMAEQEPKPEPKEVEENL+PPLIYK
Sbjct: 1  MLELPSKASNPPQSLSRTEQL-KPSVPLMAEQEPKPEPKEVEENLEPPLIYK 51

[Close]
BLAST of Cucsat.G19903 vs. NCBI nr
Match: XP_038889488.1 (heavy metal-associated isoprenylated plant protein 36-like [Benincasa hispida])

HSP 1 Score: 67.8 bits (164), Expect = 1.74e-10
Identity = 39/57 (68.42%), Postives = 43/57 (75.44%), Query Frame = 0 

Query: 27 MLELPSKASNPPQSLPRTEQL-----IKASVPLMAEQEPKPEPKEVEENLDPPLIYK 78
          MLELPSKASNPP+SL  +        +KASV LMAE E KPEPKEVEEN +PPLIYK
Sbjct: 1  MLELPSKASNPPRSLSHSHSHSLSTDLKASVSLMAEPEGKPEPKEVEENPEPPLIYK 57

[Close]
BLAST of Cucsat.G19903 vs. ExPASy TrEMBL
Match: A0A0A0LGF3 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G030630 PE=4 SV=1)

HSP 1 Score: 102 bits (254), Expect = 1.46e-23
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 27 MLELPSKASNPPQSLPRTEQLIKASVPLMAEQEPKPEPKEVEENLDPPLIYK 78
          MLELPSKASNPPQSLPRTEQLIKASVPLMAEQEPKPEPKEVEENLDPPLIYK
Sbjct: 1  MLELPSKASNPPQSLPRTEQLIKASVPLMAEQEPKPEPKEVEENLDPPLIYK 52

[Close]
BLAST of Cucsat.G19903 vs. ExPASy TrEMBL
Match: A0A5D3CPH0 (Heavy metal-associated isoprenylated plant protein 36 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00550 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.13e-18
Identity = 48/52 (92.31%), Postives = 49/52 (94.23%), Query Frame = 0 

Query: 27 MLELPSKASNPPQSLPRTEQLIKASVPLMAEQEPKPEPKEVEENLDPPLIYK 78
          MLELPSKASNPPQSL RTEQL K SVPLMAEQEPKPEPKEVEENL+PPLIYK
Sbjct: 1  MLELPSKASNPPQSLSRTEQL-KPSVPLMAEQEPKPEPKEVEENLEPPLIYK 51

[Close]
BLAST of Cucsat.G19903 vs. ExPASy TrEMBL
Match: A0A5A7U1B6 (Heavy metal-associated isoprenylated plant protein 36 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00940 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.13e-18
Identity = 48/52 (92.31%), Postives = 49/52 (94.23%), Query Frame = 0 

Query: 27 MLELPSKASNPPQSLPRTEQLIKASVPLMAEQEPKPEPKEVEENLDPPLIYK 78
          MLELPSKASNPPQSL RTEQL K SVPLMAEQEPKPEPKEVEENL+PPLIYK
Sbjct: 1  MLELPSKASNPPQSLSRTEQL-KPSVPLMAEQEPKPEPKEVEENLEPPLIYK 51

[Close]
BLAST of Cucsat.G19903 vs. ExPASy TrEMBL
Match: A0A1S3BYY5 (uncharacterized protein LOC103494708 OS=Cucumis melo OX=3656 GN=LOC103494708 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.13e-18
Identity = 48/52 (92.31%), Postives = 49/52 (94.23%), Query Frame = 0 

Query: 27 MLELPSKASNPPQSLPRTEQLIKASVPLMAEQEPKPEPKEVEENLDPPLIYK 78
          MLELPSKASNPPQSL RTEQL K SVPLMAEQEPKPEPKEVEENL+PPLIYK
Sbjct: 1  MLELPSKASNPPQSLSRTEQL-KPSVPLMAEQEPKPEPKEVEENLEPPLIYK 51

The following BLAST results are available for this feature:
BLAST of Cucsat.G19903 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G19903 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004144820.23.01e-23100.00heavy metal-associated isoprenylated plant protein 36 [Cucumis sativus] >KGN6095... [more]
KAA0048026.12.32e-1892.31heavy metal-associated isoprenylated plant protein 36 [Cucumis melo var. makuwa][more]
XP_008454249.12.32e-1892.31PREDICTED: uncharacterized protein LOC103494708 [Cucumis melo][more]
TYK13793.12.32e-1892.31heavy metal-associated isoprenylated plant protein 36 [Cucumis melo var. makuwa][more]
XP_038889488.11.74e-1068.42heavy metal-associated isoprenylated plant protein 36-like [Benincasa hispida][more]
BLAST of Cucsat.G19903 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGF31.46e-23100.00HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G030630 PE=4 SV... [more]
A0A5D3CPH01.13e-1892.31Heavy metal-associated isoprenylated plant protein 36 OS=Cucumis melo var. makuw... [more]
A0A5A7U1B61.13e-1892.31Heavy metal-associated isoprenylated plant protein 36 OS=Cucumis melo var. makuw... [more]
A0A1S3BYY51.13e-1892.31uncharacterized protein LOC103494708 OS=Cucumis melo OX=3656 GN=LOC103494708 PE=... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.100coord: 93..157
e-value: 1.4E-18
score: 68.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 362..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 352..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..294
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..278
NoneNo IPR availablePANTHERPTHR45868HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATEDcoord: 71..389
NoneNo IPR availablePANTHERPTHR45868:SF46HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 35coord: 71..389
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 99..154
e-value: 1.5E-14
score: 54.1
IPR006121Heavy metal-associated domain, HMAPROSITEPS50846HMA_2coord: 101..157
score: 12.348649
IPR006121Heavy metal-associated domain, HMACDDcd00371HMAcoord: 97..156
e-value: 1.56685E-13
score: 63.0085
IPR036163Heavy metal-associated domain superfamilySUPERFAMILY55008HMA, heavy metal-associated domaincoord: 91..159

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G19903.T1Cucsat.G19903.T1mRNA
Cucsat.G19903.T3Cucsat.G19903.T3mRNA
Cucsat.G19903.T2Cucsat.G19903.T2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005840 ribosome
molecular_function GO:0046872 metal ion binding