Cucsat.G19849 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G19849
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Auxin-responsive protein
Location	ctg4: 2022500 .. 2024465 (+)
RNA-Seq Expression	Cucsat.G19849
Synteny	Cucsat.G19849

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATAAAAAAATAAGTTGATGTATAATCATTTTAATTCAAACTACAGACCTCTTCATTAATAATATTTTGGTTAAGCCTTTGTTAGGAATAATTCGATATCCTAACATAAGAGAATCCTCAACCACAAGATATAGAGCGCGTGGCGAAGACGCACTTGGTAGGGAAGTGGGGGAAATGATAGGCTCTTTAGCTTTAATCGGCTTCTATAAAATACGTTTGAGCGTTATTTGGGCCAACAAGCATTTCCATTTCTTCTCTTCATAACTTTCCTCTCCGCCTTCTGTTTGTTTTCCGAGAAAAAAATCATATTGTACACAAATCCATCGGAAAATTCAGTAAACCCATTTCAGAGAAGCAAAAATTCAACAATGGCCTTTGAGAAAGATCTCAACTTGGAAGCCACCGAGCTCCGATTGGGTCTCCCGGGAACTTCACCCGACGATCAATCTAATTCTCCCATCAACCGAACCAACTCCAACAAAAGAGCTTTGCCCTCCGACGACCAAAACTCCTCCGAATCTCGCCGAGAAATTAACTCTGATACCTCCAAATGCAGCCAAGAAAATACCCCTCCTACCAAGTAAGAACTTTTATCAAACAGTAAAGTTTTGGTTTATTATTTCTAAAAGTTTAGAAATTAGTTAGATTTTGGGGTTTTTTTTCTTCTTAAATTAGAATTTGACAGAAATATTTTATATTTAATAGGGCACAAGTTGTGGGGTGGCCACCGGTGAGATCATTTCGAAAGAATTCTTTACAAGCAAAGAAAAAAGAGGAGACGGCGGCCGGAATGTTCATAAAAGTGAGCATGGATGGAGCTCCATTTCTTAGGAAAGTTGATCTTAAGATCTATCAAGGATATCCTGACCTTCTTCAAGCTTTGGAGAACATGTTCAAATTTTCTCTTGGTAAGTACATATTATTTCTTTCAAATATAATCCGATCTCTTAATTAGATCTTGAGATCTCTCTCTTTAATGATGAAAATTTATTGATGTTTTCTTTCTTTGAATGTTTTTTCAGGCAAGTTTTGTGAGAGAGAAGGATATAATGGGTCGGAATTTGTTCCAACGTATGAAGATAAAGATGGTGACTGGATGCTCGTCGGCGATGTTCCATGGGAGTAAGTTTCTTATCTCTACATAAAATAAAATGCATGCATGGATATTTTTACTCTATTAGTTATATTTGAACATTTTTTTACGTAATAGTTTGGTGAAGATCTGATTCTTTAGAAGATACATTAGCTACAACTACTCCTATTATCCAATAGTTTATGTAATATAATATAGTATCAAAACCAATTTAGATCGATTATTGATTGGTTTATATGAAATTTTGCAGAATGTTCATGAGCTCATGCAAGAAGCTAAGGATCATGAAAGGATCAGAAGCAAAAGGTTTAGGCTGTGGATCAGTGTGAAATAAAGAAATAAAAAATGAAAGTGAAAAAAGGGATTAGAGAGCACCCCAAATTGCTCTCTTTTTTATAAGATCGTCGGAAAAAGTCGTGAAAGTTAATCACAACCGCCATGGATTTGCCGACGGAGTGCAACCGCAACCGCCGGCCGACTTGCCGATGATCTGACTGAATTCGATCTCGTGTAAATGTTTATGAAAAATCAGATCTTGATTTGCTTAGAGAGAGAGAAAGAGAAAGAGGGGTTGATGATGAAGAGTTAATTAAGACCCCAAAACAAATAAGTGAATTGAGTTTTTTTAATCTTTTTTTTGGTGATTATATTCATATTTATTTCTTGTGGGGGGATAATGTAATTGAATTCAAGATAGGTTGGAAATTATGTTAATTACCCCCAAAGAGTTTGTATATGTAATTGAATGTGATATATAATCATCAATTCCAATAGAAATGATCTTTCTTTCTTTTTTAATTCATGATATATATCTATTCTTATTGAGTTTAAATGTTGAAGCATATTATATTTAACATTTGTTTTATTTTCAA

Coding sequence (CDS)

ATGGCCTTTGAGAAAGATCTCAACTTGGAAGCCACCGAGCTCCGATTGGGTCTCCCGGGAACTTCACCCGACGATCAATCTAATTCTCCCATCAACCGAACCAACTCCAACAAAAGAGCTTTGCCCTCCGACGACCAAAACTCCTCCGAATCTCGCCGAGAAATTAACTCTGATACCTCCAAATGCAGCCAAGAAAATACCCCTCCTACCAAGGCACAAGTTGTGGGGTGGCCACCGGTGAGATCATTTCGAAAGAATTCTTTACAAGCAAAGAAAAAAGAGGAGACGGCGGCCGGAATGTTCATAAAAGTGAGCATGGATGGAGCTCCATTTCTTAGGAAAGTTGATCTTAAGATCTATCAAGGATATCCTGACCTTCTTCAAGCTTTGGAGAACATGTTCAAATTTTCTCTTGGCAAGTTTTGTGAGAGAGAAGGATATAATGGGTCGGAATTTGTTCCAACGTATGAAGATAAAGATGGTGACTGGATGCTCGTCGGCGATGTTCCATGGGAGTAA

Protein sequence

MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSKCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIYQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE

Homology

[Close]

BLAST of Cucsat.G19849 vs. ExPASy Swiss-Prot
Match: O24542 (Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 6.8e-50
Identity = 101/171 (59.06%), Postives = 128/171 (74.85%), Query Frame = 0


Query: 2   AFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSK 61
           ++EK+LNL+ATELRLGLPG+   ++  +      SNKR+ P      S S     SD +K
Sbjct: 7   SYEKELNLKATELRLGLPGSDEPEKRAT----ARSNKRSSPEASDEESISN---GSDVTK 66

Query: 62  CSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAA-GMFIKVSMDGAPFLRKVDLKIY 121
                 PP KAQVVGWPP+RS+RKN++Q KK+EE+   GM++KVSM GAP+LRK+DLK+Y
Sbjct: 67  -EDNVVPPAKAQVVGWPPIRSYRKNNVQQKKEEESEGNGMYVKVSMAGAPYLRKIDLKVY 126

Query: 122 QGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPW 172
           + YP+LL+ALENMFK   G++ EREGYNGSE+ PTYEDKDGDWMLVGDVPW
Sbjct: 127 KSYPELLKALENMFKCIFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPW 169

[Close]

BLAST of Cucsat.G19849 vs. ExPASy Swiss-Prot
Match: O24543 (Auxin-induced protein 22E OS=Vigna radiata var. radiata OX=3916 GN=AUX22E PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 8.9e-50
Identity = 103/180 (57.22%), Postives = 133/180 (73.89%), Query Frame = 0


Query: 2   AFEKDLNLEATELRLGLPGTSPDDQSNSPINRT---NSNKRALPSDDQNSSESRREINSD 61
           ++E +LNL ATELRLGLPG S + Q   P + +   +SNKR+ P  +   S  +  INSD
Sbjct: 3   SYETELNLRATELRLGLPG-SDEPQEKRPCSGSVVRSSNKRSSP--ELEESRCKSNINSD 62

Query: 62  ------TSKCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEE-TAAGMFIKVSMDGAPF 121
                 TS  ++++  P K QVVGWPP+RSFRKNSLQ KK E+    GM++KVSM GAP+
Sbjct: 63  SSDSTTTSDHNEDSVQPAKVQVVGWPPIRSFRKNSLQQKKVEQGDGTGMYLKVSMAGAPY 122

Query: 122 LRKVDLKIYQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPW 172
           LRK+DLK+Y+ YP+LL+AL+N+FK + G++ EREGYNGSE+ PTYEDKDGDWMLVGDVPW
Sbjct: 123 LRKIDLKVYKSYPELLKALQNLFKCTFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPW 179

[Close]

BLAST of Cucsat.G19849 vs. ExPASy Swiss-Prot
Match: P33077 (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2)

HSP 1 Score: 195.3 bits (495), Expect = 5.7e-49
Identity = 98/170 (57.65%), Postives = 124/170 (72.94%), Query Frame = 0


Query: 3   FEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSKC 62
           +++ +NL+ATELRLGLPGT         ++   SNKR LP   +   ES       T K 
Sbjct: 7   YDELVNLKATELRLGLPGT------EETVSCGKSNKRVLPEATEKEIES-------TGK- 66

Query: 63  SQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIYQG 122
             E   P KAQ+VGWPPVRS+RKN++Q KK E    G ++KVSMDGAP+LRK+DL +Y+ 
Sbjct: 67  -TETASPPKAQIVGWPPVRSYRKNNVQTKKSESEGQGNYVKVSMDGAPYLRKIDLTMYKQ 126

Query: 123 YPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 173
           YP+L+++LENMFKFS+G++ EREGY GS+FVPTYEDKDGDWMLVGDVPWE
Sbjct: 127 YPELMKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWE 161

[Close]

BLAST of Cucsat.G19849 vs. ExPASy Swiss-Prot
Match: Q38822 (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.8e-48
Identity = 97/169 (57.40%), Postives = 129/169 (76.33%), Query Frame = 0


Query: 7   LNLEATELRLGLPGTSPDDQSNSPIN-RTNSNKRALPSDDQNSSESRREINSDTSKCSQE 66
           +NL+ TELRLGLPGT    ++   ++   N+NKR L      S+++ +EI S + K   E
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVL------STDTEKEIESSSRK--TE 64

Query: 67  NTPPTKAQVVGWPPVRSFRKNSLQAKK--KEETAAGMFIKVSMDGAPFLRKVDLKIYQGY 126
            +PP KAQ+VGWPPVRS+RKN++Q+KK   E    G+++KVSMDGAP+LRK+DL  Y+GY
Sbjct: 65  TSPPRKAQIVGWPPVRSYRKNNIQSKKNESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGY 124

Query: 127 PDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 173
            +LL+ALE MFKFS+G++ ER+GY GS+FVPTYEDKDGDWML+GDVPWE
Sbjct: 125 SELLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWE 165

[Close]

BLAST of Cucsat.G19849 vs. ExPASy Swiss-Prot
Match: P32294 (Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.7e-48
Identity = 94/172 (54.65%), Postives = 121/172 (70.35%), Query Frame = 0


Query: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60
           + FE DLNL+ATELRLGLPGT   + +N   +    N +    +    S S  + +    
Sbjct: 5   VVFESDLNLKATELRLGLPGTEEKEDNNLRTHAVLRNNKRQVRETSQDSVSISKASHHQQ 64

Query: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIY 120
                + PP KA++VGWPP+RS+RKNS+Q    E    G+F+KVSMDGAP+LRKVDLK+Y
Sbjct: 65  HVETVSAPPPKAKIVGWPPIRSYRKNSVQ----EGEGDGIFVKVSMDGAPYLRKVDLKVY 124

Query: 121 QGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 173
            GYP+LL+ALE MFK ++G++ EREGY GSE+ PTYEDKDGDWMLVGDVPW+
Sbjct: 125 GGYPELLKALETMFKLAIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWD 172

[Close]

BLAST of Cucsat.G19849 vs. NCBI nr
Match: XP_004139234.1 (auxin-responsive protein IAA4 [Cucumis sativus] >KGN60809.1 hypothetical protein Csa_019290 [Cucumis sativus])

HSP 1 Score: 346 bits (887), Expect = 1.17e-119
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60
           MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS
Sbjct: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60

Query: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIY 120
           KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIY
Sbjct: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIY 120

Query: 121 QGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 172
           QGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE
Sbjct: 121 QGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 172

[Close]

BLAST of Cucsat.G19849 vs. NCBI nr
Match: XP_008455974.1 (PREDICTED: auxin-induced protein 22D-like [Cucumis melo] >KAA0063607.1 auxin-induced protein 22D-like [Cucumis melo var. makuwa] >TYK18420.1 auxin-induced protein 22D-like [Cucumis melo var. makuwa])

HSP 1 Score: 330 bits (845), Expect = 3.06e-113
Identity = 166/173 (95.95%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60
           MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQN  ESRREINSD S
Sbjct: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNPLESRREINSDPS 60

Query: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAA-GMFIKVSMDGAPFLRKVDLKI 120
           KC+QENTPPTKAQVVGWPPVRSFRKN LQAKKKEE AA GMFIKVSMDGAPFLRKVDLKI
Sbjct: 61  KCTQENTPPTKAQVVGWPPVRSFRKNCLQAKKKEEAAAAGMFIKVSMDGAPFLRKVDLKI 120

Query: 121 YQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 172
           YQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE
Sbjct: 121 YQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 173

[Close]

BLAST of Cucsat.G19849 vs. NCBI nr
Match: BAA85822.1 (Aux/IAA protein, partial [Cucumis sativus])

HSP 1 Score: 325 bits (833), Expect = 1.10e-111
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 12  TELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSKCSQENTPPTK 71
           TELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSKCSQENTPPTK
Sbjct: 1   TELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSKCSQENTPPTK 60

Query: 72  AQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIYQGYPDLLQALE 131
           AQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIYQGYPDLLQALE
Sbjct: 61  AQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIYQGYPDLLQALE 120

Query: 132 NMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 172
           NMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE
Sbjct: 121 NMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 161

[Close]

BLAST of Cucsat.G19849 vs. NCBI nr
Match: XP_038889147.1 (auxin-induced protein 22D-like [Benincasa hispida])

HSP 1 Score: 314 bits (805), Expect = 3.96e-107
Identity = 160/175 (91.43%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60
           MAFEKDLNLEATELRLGLPGTSPDDQS SPINR NSNKRALPSDDQN  ESRREINSD +
Sbjct: 1   MAFEKDLNLEATELRLGLPGTSPDDQS-SPINRANSNKRALPSDDQNLPESRREINSDPT 60

Query: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAA---GMFIKVSMDGAPFLRKVDL 120
           KC+QEN PPTKAQVVGWPPVRSFRKN  QAKKK+E AA   GMFIKVSMDGAPFLRKVDL
Sbjct: 61  KCNQENPPPTKAQVVGWPPVRSFRKNCFQAKKKDEAAAAATGMFIKVSMDGAPFLRKVDL 120

Query: 121 KIYQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 172
           KIYQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE
Sbjct: 121 KIYQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 174

[Close]

BLAST of Cucsat.G19849 vs. NCBI nr
Match: KAG6599309.1 (Auxin-induced protein 22D, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 296 bits (757), Expect = 9.04e-100
Identity = 153/178 (85.96%), Postives = 157/178 (88.20%), Query Frame = 0


Query: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60
           MAFEKDLNLEATELRLGLPGTSPDDQS SPINR  SNKRALPSDDQN  ES R+ NSD +
Sbjct: 1   MAFEKDLNLEATELRLGLPGTSPDDQS-SPINRIISNKRALPSDDQNPPESGRDSNSDLT 60

Query: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAA------GMFIKVSMDGAPFLRK 120
           K  QEN PPTKAQVVGWPPVRSFRKN  QAKKK+E AA      GMFIKVSMDGAPFLRK
Sbjct: 61  KSDQENPPPTKAQVVGWPPVRSFRKNCFQAKKKDEVAAATTAAGGMFIKVSMDGAPFLRK 120

Query: 121 VDLKIYQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 172
           VDLK YQGYP+LLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE
Sbjct: 121 VDLKTYQGYPELLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 177

[Close]

BLAST of Cucsat.G19849 vs. ExPASy TrEMBL
Match: A0A0A0LID4 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G011420 PE=3 SV=1)

HSP 1 Score: 346 bits (887), Expect = 5.66e-120
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60
           MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS
Sbjct: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60

Query: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIY 120
           KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIY
Sbjct: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIY 120

Query: 121 QGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 172
           QGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE
Sbjct: 121 QGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 172

[Close]

BLAST of Cucsat.G19849 vs. ExPASy TrEMBL
Match: A0A5A7V9G4 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001460 PE=3 SV=1)

HSP 1 Score: 330 bits (845), Expect = 1.48e-113
Identity = 166/173 (95.95%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60
           MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQN  ESRREINSD S
Sbjct: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNPLESRREINSDPS 60

Query: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAA-GMFIKVSMDGAPFLRKVDLKI 120
           KC+QENTPPTKAQVVGWPPVRSFRKN LQAKKKEE AA GMFIKVSMDGAPFLRKVDLKI
Sbjct: 61  KCTQENTPPTKAQVVGWPPVRSFRKNCLQAKKKEEAAAAGMFIKVSMDGAPFLRKVDLKI 120

Query: 121 YQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 172
           YQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE
Sbjct: 121 YQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 173

[Close]

BLAST of Cucsat.G19849 vs. ExPASy TrEMBL
Match: A0A1S3C3E2 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103496036 PE=3 SV=1)

HSP 1 Score: 330 bits (845), Expect = 1.48e-113
Identity = 166/173 (95.95%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60
           MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQN  ESRREINSD S
Sbjct: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNPLESRREINSDPS 60

Query: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAA-GMFIKVSMDGAPFLRKVDLKI 120
           KC+QENTPPTKAQVVGWPPVRSFRKN LQAKKKEE AA GMFIKVSMDGAPFLRKVDLKI
Sbjct: 61  KCTQENTPPTKAQVVGWPPVRSFRKNCLQAKKKEEAAAAGMFIKVSMDGAPFLRKVDLKI 120

Query: 121 YQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 172
           YQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE
Sbjct: 121 YQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 173

[Close]

BLAST of Cucsat.G19849 vs. ExPASy TrEMBL
Match: Q9SSY1 (Auxin-responsive protein (Fragment) OS=Cucumis sativus OX=3659 GN=CsIAA3 PE=2 SV=1)

HSP 1 Score: 325 bits (833), Expect = 5.33e-112
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 12  TELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSKCSQENTPPTK 71
           TELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSKCSQENTPPTK
Sbjct: 1   TELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSKCSQENTPPTK 60

Query: 72  AQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIYQGYPDLLQALE 131
           AQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIYQGYPDLLQALE
Sbjct: 61  AQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIYQGYPDLLQALE 120

Query: 132 NMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 172
           NMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE
Sbjct: 121 NMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 161

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BLAST of Cucsat.G19849 vs. ExPASy TrEMBL
Match: A0A6J1G4Q6 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111450780 PE=3 SV=1)

HSP 1 Score: 295 bits (754), Expect = 1.17e-99
Identity = 152/176 (86.36%), Postives = 157/176 (89.20%), Query Frame = 0


Query: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60
           MAF+KDLNLEATELRLGLPGTSPDDQS SPINR  SNKRALPSDDQN  ES R+ NSD +
Sbjct: 1   MAFQKDLNLEATELRLGLPGTSPDDQS-SPINRIISNKRALPSDDQNPPESGRDSNSDLT 60

Query: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAA----GMFIKVSMDGAPFLRKVD 120
           K  QEN PPTKAQVVGWPPVRSFRKN  QAKKK+E AA    GMFIKVSMDGAPFLRKVD
Sbjct: 61  KSDQENPPPTKAQVVGWPPVRSFRKNCFQAKKKDEGAATAAGGMFIKVSMDGAPFLRKVD 120

Query: 121 LKIYQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 172
           LK YQGYP+LLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE
Sbjct: 121 LKTYQGYPELLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWE 175

The following BLAST results are available for this feature:

BLAST of Cucsat.G19849 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24542	6.8e-50	59.06	Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 S...	[more]
O24543	8.9e-50	57.22	Auxin-induced protein 22E OS=Vigna radiata var. radiata OX=3916 GN=AUX22E PE=2 S...	[more]
P33077	5.7e-49	57.65	Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2	[more]
Q38822	2.8e-48	57.40	Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1	[more]
P32294	3.7e-48	54.65	Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 S...	[more]

BLAST of Cucsat.G19849 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139234.1	1.17e-119	100.00	auxin-responsive protein IAA4 [Cucumis sativus] >KGN60809.1 hypothetical protein...	[more]
XP_008455974.1	3.06e-113	95.95	PREDICTED: auxin-induced protein 22D-like [Cucumis melo] >KAA0063607.1 auxin-ind...	[more]
BAA85822.1	1.10e-111	100.00	Aux/IAA protein, partial [Cucumis sativus]	[more]
XP_038889147.1	3.96e-107	91.43	auxin-induced protein 22D-like [Benincasa hispida]	[more]
KAG6599309.1	9.04e-100	85.96	Auxin-induced protein 22D, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cucsat.G19849 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LID4	5.66e-120	100.00	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G011420 PE=3 SV=1	[more]
A0A5A7V9G4	1.48e-113	95.95	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3C3E2	1.48e-113	95.95	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103496036 PE=3 SV=1	[more]
Q9SSY1	5.33e-112	100.00	Auxin-responsive protein (Fragment) OS=Cucumis sativus OX=3659 GN=CsIAA3 PE=2 SV...	[more]
A0A6J1G4Q6	1.17e-99	86.36	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111450780 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 12..137 e-value: 4.4E-31 score: 108.6
None	No IPR available	GENE3D	3.10.20.90		coord: 93..148 e-value: 3.3E-14 score: 54.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..44
None	No IPR available	PANTHER	PTHR31734:SF167	AUXIN-RESPONSIVE PROTEIN	coord: 1..141
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 96..140
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 1..141
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 99..153 score: 12.194637

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G19849.T2	Cucsat.G19849.T2	mRNA
Cucsat.G19849.T1	Cucsat.G19849.T1	mRNA
Cucsat.G19849.T5	Cucsat.G19849.T5	mRNA
Cucsat.G19849.T4	Cucsat.G19849.T4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding