Cucsat.G19842 (gene) Cucumber (B10) v3

Overview
NameCucsat.G19842
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionproteoglycan 4-like isoform X2
Locationctg4: 1926208 .. 1929588 (+)
RNA-Seq ExpressionCucsat.G19842
SyntenyCucsat.G19842
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTCATCCAATCCAACAGCAAAACACCGATAAAAAGCCTTCATTTCTTTTGTTGTTGGGGTTTTGTTTTCTCTTCCGATCATTACGCTAACCAAAAGGAAAACCGCTAACGTTGATTTCTTTGTAATAAAAGAAAATAAACAATAACCCAATTTTCAAAAAAAAATAAGGGGGAGGGGAGGGGAGGGACAAAGGAGTGGGGAACCAGGGAGATCTTGTCAGATCGGCAAGGGGAGCTGGTAATTCAAGGTGGGTCTTTTTCTTCTTCCTCTCTGTTTTTCATCTTTTTTTTTTCTTTTTAGAGTTTCAGAGTTTTAGAGTTTTTTTAATGGTGGATATGAATTCCCTTGTCTTCTTTTTCATCTTTTTTGCTGTGTTCTGATGAAAATGGTTCTTTTTTGTTGTCTTTTTTCTTCTTCTTTGATGGCTTTGAGTTGTTTTTTAAGCTTGGGGGAAATGGGGTTCTCTAGTATTTCAATCTTTGTGTGTGTTCTTTTTCTTTCTTTTGGGTGTGGTGGAATTGGGATTTTGAATTAACCCTTTTGATTTTGTGGGTCAATTCAAACTTTTGAACTTTCCTTTTGCATTTTGAGCTTATAGTTGAAGCTTTCTTGAGGATTCAATTTGATGTTTCTCTTTTGTTCCTTACTTTTTGTGGAGTTTTTTTTGGGAAACTAATTGATTTTCTTAGTTCAGAAGTCAATTCCTCTTTTTATAATATAGATTAAATAATTTGGTTGGTTGTTGTCGAGAGGCTTTTTGTTTCTTTTGAACCAAAGTTATATCAAGTTGAGTGAGTGTAAGTTTGTAATTTTTGTATTTGAGCTTCTTTTGATTTTGGTTTGGAAAATGATACCTATTTCTTTTTGGAGGATTTTGATTGCGATGTTGTTGGTGTTTTTGGTGCAGGGTCATGGGTAGGGAAATTGTTGGTGATGTACTGGAGAAGCCAAATGATCTTGTAGTGGTTTTAAATGGCGTTTCTCATGAAAAAGCCCATGTTTCCCCCAAAATTTCAGAAGAAAGTATTGATTTGGAGGAATACGAAGAGAAGGAATCGAGCGAGGAGAATTTGTTTCCCGAAAACTATCAAGAAACCGACCACGATGTTGCAGCCATCAAAAGCTCTAACCTTGATGCCAGTGTGCCTGCACCTGTGACCATGCCCGTGCCTGCACCTCCACCTCCACCTGCACCTGCACCCACGCCTGCAGCTGTGCTTGTGCTTGAGGAGAAGAAGAAGGAGGAGAGAACTGTAGCACAAAAAATCAGTGACTTCAATAAGTCTATTTCACCTGGGACTGTAGCTGTTACTCCAAAAATAATGAGGGTGAACCACAAGATTCAACAGCCACCCGTGCAGGAACCGGAGAAAGCAGTCATGTGCTCACAAACCATTGAGACCGAGCCTACTTCGACTACAGTTCCTGTCGTTGAGGCATCACCAAATACTATTGAATTGCAGCCTCCCAGCCCTGAAAAGAACTCGCATGTAAGTACAACTTTTAGGAATGTCAATGAAGCCACATTTGTGTTTACTGGAAGTAGCTTTTATGCAACAGGAAAACTGGAAAAGTACCACAGGACTAGTTAAGTCTCCTTGAATAGAACATTATTGACTGGAAAACAGCTTCCTGACTTTGATTTTCGGGTTTATCTCCTATTCGACTTCTTTCATGGACTTTCAACACAAATATAACTATGCCCTTTTGTTCAGTTTCATTAGGGTCAGTTACGAGTTTCGAACTGCATCAACTTCAATTTAGTTGAGTGTAAAATGCCATTGAATATCTTTATCTTTTCTAATCTTAAAATGGTTGGTTTTGTTTATAGTTCTTTGGGAAATATATTTAGTTGCATTACAGTTTGGTTGAGAATGTCCTACCCTCCTGACCTTGTTTCTTATATCTTCAAAGTATAGATTAAGATTTTTGTTAGAAAATGAGATGGACAAAATTATGATTTCTATATGTTTTACTTTTCTACAGCCAAACTCGCCTCAATCATCGAGTAAATCTTCACAGAACGATCTTACGAAACATCATGAAGAAGATCACTGGTCCATTGCCTCCTCGTATCCTCTTTTCAACAACTACCATATAGAACTAAGCCTTTTTTTTTTTTTTTGTAAATTCTTAATTTGTTCATATTATCAGATTTTGTTATCCTTAGCCCATTCATAGTACTGTTCAATCTATTCGACAACTAAAATCTAAAGTAACTATCGGAATGGCTCCTACATTTAGATCGGCTGAACGTGCTGGTAAAAGGAAGGAGGTATTACTTGTGTTGAATGATTTAGACGTTACCTTGCCGTTCAACCTGTGGTTTTCTGTTTGCTTATGAAATTTGTTCTCTATTCAGTTCTATAACAAGTTGGAGGAGAAACACAAAGCTATGGAGGCAGAGAGAGTCCAATACGAAGCACGAATTAAGGTATTTTGGACTACCATCCTGTTTATGTTTTGTTTCTACGTTTTGATGCATATCGTATTCTTCAACACTTTGTATTGACGAGGGAAAGGATCAGCTTAGTTTCATCTTTGATTTACTGCTTTAAAATGCTTTTAGGAAGAGCAAGAAGCAGCAATCAAGCAGCTTAGGAAAGGATTAGTGATCAAAGCAAATCCAGTGCCCAGTTTCTATTATGAAGGACCACCACCAAAGACTGAACTAAAAAAGGTAGCCATTGAAACTCTATTCTGATACGATCATTCCCCTCTTAGGATTTACATTTTACGGATGCTTTGTTTTATGATGGCGAAGTTTTAACTAGTACTTTATGTCAGTTACCATTAACTAGGCCAAAGTCTCCAAATCTAACTCGAAGGAAAAGCTGTGGTGATTCGATGAACTTTAGCATAGAGGAAAAAGGAAAACTATGCACCCGAGGACAACGCCATAGCTTTAGTAGTCAGAAATCAGAGGAATCAACTAACGGCGTAGCCCGCAAAAGCAAAGCACAAGTGAATGGGCAAAGCCACAACAATGAATCTTTTAAACATAGAAACCATGTGAAGCGCGACAGAGAGACCAAAAAAACAACTTTTGCAACAACTGATCCACACACAAGTAATGTAGATATCCCCATTCAGTCATGAACATTTAATTTCTCCTTAATGTGAACTAAGAAAAAGGAAAAAAGAAGAAGAAAAAAAAGAGGGGGGAGCAAAGAAAGAAAAAGCTTTATCTTTCAGTTGCTAGTTGTTTCGTTACCTAAAAGAAAATAGCTTCTTTTCTTTTCTTTTTACATCTAATTACTTCACTGAGTGAGTTGTGCTAATATGAAATGTATATGTTTTTCTTTTCTTTTCTTTTCTTTTCGTTTCTTTTCTTTTCTTTTTTTTCCCATGAAAGTTATAATGATTTTTTATGTTATACA

Coding sequence (CDS)

ATGGGTAGGGAAATTGTTGGTGATGTACTGGAGAAGCCAAATGATCTTGTAGTGGTTTTAAATGGCGTTTCTCATGAAAAAGCCCATGTTTCCCCCAAAATTTCAGAAGAAAGTATTGATTTGGAGGAATACGAAGAGAAGGAATCGAGCGAGGAGAATTTGTTTCCCGAAAACTATCAAGAAACCGACCACGATGTTGCAGCCATCAAAAGCTCTAACCTTGATGCCAGTGTGCCTGCACCTGTGACCATGCCCGTGCCTGCACCTCCACCTCCACCTGCACCTGCACCCACGCCTGCAGCTGTGCTTGTGCTTGAGGAGAAGAAGAAGGAGGAGAGAACTGTAGCACAAAAAATCAGTGACTTCAATAAGTCTATTTCACCTGGGACTGTAGCTGTTACTCCAAAAATAATGAGGGTGAACCACAAGATTCAACAGCCACCCGTGCAGGAACCGGAGAAAGCAGTCATGTGCTCACAAACCATTGAGACCGAGCCTACTTCGACTACAGTTCCTGTCGTTGAGGCATCACCAAATACTATTGAATTGCAGCCTCCCAGCCCTGAAAAGAACTCGCATGTAAGTACAACTTTTAGGAATGTCAATGAAGCCACATTTGTGTTTACTGGAAGTAGCTTTTATGCAACAGGAAAACTGGAAAAGTACCACAGGACTAGTTAA

Protein sequence

MGREIVGDVLEKPNDLVVVLNGVSHEKAHVSPKISEESIDLEEYEEKESSEENLFPENYQETDHDVAAIKSSNLDASVPAPVTMPVPAPPPPPAPAPTPAAVLVLEEKKKEERTVAQKISDFNKSISPGTVAVTPKIMRVNHKIQQPPVQEPEKAVMCSQTIETEPTSTTVPVVEASPNTIELQPPSPEKNSHVSTTFRNVNEATFVFTGSSFYATGKLEKYHRTS
Homology
[Close]
BLAST of Cucsat.G19842 vs. NCBI nr
Match: XP_004139247.1 (protein WVD2-like 1 [Cucumis sativus] >KAE8651555.1 hypothetical protein Csa_019391 [Cucumis sativus])

HSP 1 Score: 363 bits (933), Expect = 1.91e-122
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0 

Query: 1   MGREIVGDVLEKPNDLVVVLNGVSHEKAHVSPKISEESIDLEEYEEKESSEENLFPENYQ 60
           MGREIVGDVLEKPNDLVVVLNGVSHEKAHVSPKISEESIDLEEYEEKESSEENLFPENYQ
Sbjct: 1   MGREIVGDVLEKPNDLVVVLNGVSHEKAHVSPKISEESIDLEEYEEKESSEENLFPENYQ 60

Query: 61  ETDHDVAAIKSSNLDASVPAPVTMPVPAPPPPPAPAPTPAAVLVLEEKKKEERTVAQKIS 120
           ETDHDVAAIKSSNLDASVPAPVTMPVPAPPPPPAPAPTPAAVLVLEEKKKEERTVAQKIS
Sbjct: 61  ETDHDVAAIKSSNLDASVPAPVTMPVPAPPPPPAPAPTPAAVLVLEEKKKEERTVAQKIS 120

Query: 121 DFNKSISPGTVAVTPKIMRVNHKIQQPPVQEPEKAVMCSQTIETEPTSTTVPVVEASPNT 180
           DFNKSISPGTVAVTPKIMRVNHKIQQPPVQEPEKAVMCSQTIETEPTSTTVPVVEASPNT
Sbjct: 121 DFNKSISPGTVAVTPKIMRVNHKIQQPPVQEPEKAVMCSQTIETEPTSTTVPVVEASPNT 180

Query: 181 IELQPPSPEKNSH 193
           IELQPPSPEKNSH
Sbjct: 181 IELQPPSPEKNSH 193

[Close]
BLAST of Cucsat.G19842 vs. NCBI nr
Match: KAA0063591.1 (protein WVD2-like 1 [Cucumis melo var. makuwa] >TYK18436.1 protein WVD2-like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 314 bits (804), Expect = 7.82e-103
Identity = 169/197 (85.79%), Postives = 177/197 (89.85%), Query Frame = 0 

Query: 1   MGREIVGDVLEKPNDLVVVLNGVSHEKAHVSPKISEESIDLEEYEEKESSEENLFPENYQ 60
           MGREI G V+EKPN LVVVLNGVSHEKAHVSPKISEESIDLEE+EEKES EEN F ENYQ
Sbjct: 1   MGREIAGGVVEKPNGLVVVLNGVSHEKAHVSPKISEESIDLEEFEEKESGEENSFAENYQ 60

Query: 61  ETDHDVAAIKSSNLDASVPAPVTMPVPA----PPPPPAPAPTPAAVLVLEEKKKEERTVA 120
           ET+HDVAAIKSSNLD SVPAPVT+PVP     P PPP PAP PA VLVLEEKKKEERTVA
Sbjct: 61  ETEHDVAAIKSSNLDTSVPAPVTVPVPVSEPVPAPPPPPAPAPAPVLVLEEKKKEERTVA 120

Query: 121 QKISDFNKSISPGTVAVTPKIMRVNHKIQQPPVQEPEKAVMCSQTIETEPTSTTVPVVEA 180
           QKISDFNKSISPGT+A+TPKIMRVNHKIQQPP+Q PEKAV CSQTIETE TSTT+PVVEA
Sbjct: 121 QKISDFNKSISPGTIAITPKIMRVNHKIQQPPMQAPEKAVTCSQTIETERTSTTIPVVEA 180

Query: 181 SPNTIELQPPSPEKNSH 193
           SPNTIEL PPSPEKNSH
Sbjct: 181 SPNTIELHPPSPEKNSH 197

[Close]
BLAST of Cucsat.G19842 vs. NCBI nr
Match: XP_008456211.1 (PREDICTED: protein WVD2-like 1 [Cucumis melo] >XP_008456216.1 PREDICTED: protein WVD2-like 1 [Cucumis melo])

HSP 1 Score: 313 bits (801), Expect = 2.09e-102
Identity = 169/195 (86.67%), Postives = 177/195 (90.77%), Query Frame = 0 

Query: 1   MGREIVGDVLEKPNDLVVVLNGVSHEKAHVSPKISEESIDLEEYEEKESSEENLFPENYQ 60
           MGREI G V+EKPN LVVVLNGVSHEKAHVSPKISEESIDLEE+EEKES EEN F ENYQ
Sbjct: 1   MGREIAGGVVEKPNGLVVVLNGVSHEKAHVSPKISEESIDLEEFEEKESGEENSFAENYQ 60

Query: 61  ETDHDVAAIKSSNLDASVPAPVTMPVPA--PPPPPAPAPTPAAVLVLEEKKKEERTVAQK 120
           ET+HDVAAIKSSNLDASVPAPVT+PVP   P P P PAP PA VLVLEEKKKEERTVAQK
Sbjct: 61  ETEHDVAAIKSSNLDASVPAPVTVPVPVSEPVPAPPPAPAPAPVLVLEEKKKEERTVAQK 120

Query: 121 ISDFNKSISPGTVAVTPKIMRVNHKIQQPPVQEPEKAVMCSQTIETEPTSTTVPVVEASP 180
           ISDFNKSISPGT+A+TPKIMRVNHKIQQPP+Q PEKAV CSQTIETE TSTT+PVVEASP
Sbjct: 121 ISDFNKSISPGTIAITPKIMRVNHKIQQPPMQAPEKAVTCSQTIETERTSTTIPVVEASP 180

Query: 181 NTIELQPPSPEKNSH 193
           NTIEL PPSPEKNSH
Sbjct: 181 NTIELHPPSPEKNSH 195

[Close]
BLAST of Cucsat.G19842 vs. NCBI nr
Match: XP_038890840.1 (protein WVD2-like 2 [Benincasa hispida] >XP_038890841.1 protein WVD2-like 2 [Benincasa hispida])

HSP 1 Score: 274 bits (700), Expect = 2.58e-87
Identity = 151/192 (78.65%), Postives = 163/192 (84.90%), Query Frame = 0 

Query: 1   MGREIVGDVLEKPNDLVVVLNGVSHEKAHVSPKISEESIDLEEYEEKESSEENLFPENYQ 60
           MGREI G V+EKPN LVVVLNGVSH+K HVSPKI+EESID EE+EEKESSEEN F  NYQ
Sbjct: 1   MGREIAG-VVEKPNALVVVLNGVSHDKVHVSPKIAEESIDSEEFEEKESSEENSFAGNYQ 60

Query: 61  ETDHDVAAIKSSNLDASVPAPVTMPVPAPPPPPAPAPTPAAVLVLEEKKKEERTVAQKIS 120
           ET+HDV AIKSSNLDASVPAPVT+PVPAP            V+V EEKKKEERTVAQKIS
Sbjct: 61  ETEHDVVAIKSSNLDASVPAPVTVPVPAP------------VVVPEEKKKEERTVAQKIS 120

Query: 121 DFNKSISPGTVAVTPKIMRVNHKIQQPPVQEPEKAVMCSQTIETEPTSTTVPVVEASPNT 180
           DFNKSISPGT+A TPKIM+VNHKIQQP VQ PEKA  CSQTIETEPT TT+ +VEASPNT
Sbjct: 121 DFNKSISPGTIAATPKIMKVNHKIQQPTVQAPEKAATCSQTIETEPTPTTITIVEASPNT 179

Query: 181 IELQPPSPEKNS 192
           IELQPPSP+KNS
Sbjct: 181 IELQPPSPKKNS 179

[Close]
BLAST of Cucsat.G19842 vs. NCBI nr
Match: XP_023538034.1 (protein WVD2-like 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199 bits (506), Expect = 9.37e-58
Identity = 125/204 (61.27%), Postives = 142/204 (69.61%), Query Frame = 0 

Query: 1   MGREIVGDVLEKPNDLVVVLNGVSHEKAHVSPKISEESIDLEEYEEKESSEENLFPENYQ 60
           MGREI   V+E PNDL +VLNGVSH+K H S K SEESIDLEE+E+ ESSEEN   EN Q
Sbjct: 1   MGREIAC-VVENPNDLEMVLNGVSHDKVHGSSKTSEESIDLEEFEDNESSEENSLDENRQ 60

Query: 61  ETDHDVAAIKSSNLDASVPAPVTM----------PVPAPPPPPAPAPTPAAVLVLEEKKK 120
           +T   V AIK++ +DASVP PV +          P P P P P P   P  VLV EEKKK
Sbjct: 61  DTQDGVLAIKTTIIDASVPIPVPLLAPAPELEPKPEPEPEPEPEPELVPVPVLVPEEKKK 120

Query: 121 EERTVAQKISDFNKSISPGTVAVTPKIMRVNHKIQQPPVQEPEKAVMCSQTIETE--PTS 180
           EERTVAQKISDFNKSISPGT+AVTPKI+RVNHKIQQP VQ P K  M +QTIETE  PT 
Sbjct: 121 EERTVAQKISDFNKSISPGTIAVTPKIVRVNHKIQQPTVQVPRKGAMYAQTIETERAPTP 180

Query: 181 TTVPVVEASPNTIELQPPSPEKNS 192
           TTV  V ++  T   + P P+ NS
Sbjct: 181 TTVVDVSSNVITSNSKSPGPKDNS 203

[Close]
BLAST of Cucsat.G19842 vs. ExPASy TrEMBL
Match: A0A0A0LIB5 (TPX2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010250 PE=3 SV=1)

HSP 1 Score: 363 bits (933), Expect = 2.68e-122
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0 

Query: 1   MGREIVGDVLEKPNDLVVVLNGVSHEKAHVSPKISEESIDLEEYEEKESSEENLFPENYQ 60
           MGREIVGDVLEKPNDLVVVLNGVSHEKAHVSPKISEESIDLEEYEEKESSEENLFPENYQ
Sbjct: 34  MGREIVGDVLEKPNDLVVVLNGVSHEKAHVSPKISEESIDLEEYEEKESSEENLFPENYQ 93

Query: 61  ETDHDVAAIKSSNLDASVPAPVTMPVPAPPPPPAPAPTPAAVLVLEEKKKEERTVAQKIS 120
           ETDHDVAAIKSSNLDASVPAPVTMPVPAPPPPPAPAPTPAAVLVLEEKKKEERTVAQKIS
Sbjct: 94  ETDHDVAAIKSSNLDASVPAPVTMPVPAPPPPPAPAPTPAAVLVLEEKKKEERTVAQKIS 153

Query: 121 DFNKSISPGTVAVTPKIMRVNHKIQQPPVQEPEKAVMCSQTIETEPTSTTVPVVEASPNT 180
           DFNKSISPGTVAVTPKIMRVNHKIQQPPVQEPEKAVMCSQTIETEPTSTTVPVVEASPNT
Sbjct: 154 DFNKSISPGTVAVTPKIMRVNHKIQQPPVQEPEKAVMCSQTIETEPTSTTVPVVEASPNT 213

Query: 181 IELQPPSPEKNSH 193
           IELQPPSPEKNSH
Sbjct: 214 IELQPPSPEKNSH 226

[Close]
BLAST of Cucsat.G19842 vs. ExPASy TrEMBL
Match: A0A5D3D4H0 (Protein WVD2-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001620 PE=3 SV=1)

HSP 1 Score: 314 bits (804), Expect = 3.79e-103
Identity = 169/197 (85.79%), Postives = 177/197 (89.85%), Query Frame = 0 

Query: 1   MGREIVGDVLEKPNDLVVVLNGVSHEKAHVSPKISEESIDLEEYEEKESSEENLFPENYQ 60
           MGREI G V+EKPN LVVVLNGVSHEKAHVSPKISEESIDLEE+EEKES EEN F ENYQ
Sbjct: 1   MGREIAGGVVEKPNGLVVVLNGVSHEKAHVSPKISEESIDLEEFEEKESGEENSFAENYQ 60

Query: 61  ETDHDVAAIKSSNLDASVPAPVTMPVPA----PPPPPAPAPTPAAVLVLEEKKKEERTVA 120
           ET+HDVAAIKSSNLD SVPAPVT+PVP     P PPP PAP PA VLVLEEKKKEERTVA
Sbjct: 61  ETEHDVAAIKSSNLDTSVPAPVTVPVPVSEPVPAPPPPPAPAPAPVLVLEEKKKEERTVA 120

Query: 121 QKISDFNKSISPGTVAVTPKIMRVNHKIQQPPVQEPEKAVMCSQTIETEPTSTTVPVVEA 180
           QKISDFNKSISPGT+A+TPKIMRVNHKIQQPP+Q PEKAV CSQTIETE TSTT+PVVEA
Sbjct: 121 QKISDFNKSISPGTIAITPKIMRVNHKIQQPPMQAPEKAVTCSQTIETERTSTTIPVVEA 180

Query: 181 SPNTIELQPPSPEKNSH 193
           SPNTIEL PPSPEKNSH
Sbjct: 181 SPNTIELHPPSPEKNSH 197

[Close]
BLAST of Cucsat.G19842 vs. ExPASy TrEMBL
Match: A0A1S3C3Z4 (protein WVD2-like 1 OS=Cucumis melo OX=3656 GN=LOC103496211 PE=3 SV=1)

HSP 1 Score: 313 bits (801), Expect = 1.01e-102
Identity = 169/195 (86.67%), Postives = 177/195 (90.77%), Query Frame = 0 

Query: 1   MGREIVGDVLEKPNDLVVVLNGVSHEKAHVSPKISEESIDLEEYEEKESSEENLFPENYQ 60
           MGREI G V+EKPN LVVVLNGVSHEKAHVSPKISEESIDLEE+EEKES EEN F ENYQ
Sbjct: 1   MGREIAGGVVEKPNGLVVVLNGVSHEKAHVSPKISEESIDLEEFEEKESGEENSFAENYQ 60

Query: 61  ETDHDVAAIKSSNLDASVPAPVTMPVPA--PPPPPAPAPTPAAVLVLEEKKKEERTVAQK 120
           ET+HDVAAIKSSNLDASVPAPVT+PVP   P P P PAP PA VLVLEEKKKEERTVAQK
Sbjct: 61  ETEHDVAAIKSSNLDASVPAPVTVPVPVSEPVPAPPPAPAPAPVLVLEEKKKEERTVAQK 120

Query: 121 ISDFNKSISPGTVAVTPKIMRVNHKIQQPPVQEPEKAVMCSQTIETEPTSTTVPVVEASP 180
           ISDFNKSISPGT+A+TPKIMRVNHKIQQPP+Q PEKAV CSQTIETE TSTT+PVVEASP
Sbjct: 121 ISDFNKSISPGTIAITPKIMRVNHKIQQPPMQAPEKAVTCSQTIETERTSTTIPVVEASP 180

Query: 181 NTIELQPPSPEKNSH 193
           NTIEL PPSPEKNSH
Sbjct: 181 NTIELHPPSPEKNSH 195

[Close]
BLAST of Cucsat.G19842 vs. ExPASy TrEMBL
Match: A0A6J1HMH4 (protein WVD2-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111465541 PE=3 SV=1)

HSP 1 Score: 196 bits (497), Expect = 1.01e-56
Identity = 124/200 (62.00%), Postives = 142/200 (71.00%), Query Frame = 0 

Query: 1   MGREIVGDVLEKPNDLVVVLNGVSHEKAHVSPKISEESIDLEEYEEKESSEENLFPENYQ 60
           MGREI   V+E PNDL +VLNGVSH+K H S K SEESIDLEE+E+ ESSEEN   EN Q
Sbjct: 1   MGREIAC-VVEDPNDLEMVLNGVSHDKVHDSSKTSEESIDLEEFEDNESSEENSLDENRQ 60

Query: 61  ETDHDVAAIKSSNLDASVPAPVTMPVPA------PPPPPAPAPTPAAVLVLEEKKKEERT 120
           ET   V AIK++ +DASVP PV +  PA      P P P P   P  +LV EEKKKEERT
Sbjct: 61  ETLDGVLAIKTTIIDASVPIPVPLLAPASELEPKPEPEPEPELVPVPLLVPEEKKKEERT 120

Query: 121 VAQKISDFNKSISPGTVAVTPKIMRVNHKIQQPPVQEPEKAVMCSQTIETE--PTSTTVP 180
           VAQKISDFNKSISPGT+AVTPKI+RVNHKIQQP VQ   K  M +QTIETE  PT TTV 
Sbjct: 121 VAQKISDFNKSISPGTIAVTPKIVRVNHKIQQPTVQVQRKGAMYAQTIETERAPTPTTVV 180

Query: 181 VVEASPNTIELQPPSPEKNS 192
            V ++  T   + P P++NS
Sbjct: 181 DVSSNAITSNSKSPGPKENS 199

[Close]
BLAST of Cucsat.G19842 vs. ExPASy TrEMBL
Match: A0A6J1FIF3 (protein WVD2-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111444228 PE=3 SV=1)

HSP 1 Score: 194 bits (493), Expect = 3.87e-56
Identity = 125/204 (61.27%), Postives = 141/204 (69.12%), Query Frame = 0 

Query: 1   MGREIVGDVLEKPNDLVVVLNGVSHEKAHVSPKISEESIDLEEYEEKESSEENLFPENYQ 60
           MGREI   V+E PNDL +VLNGVSH+K H S K SEESIDLEE+E+ ESSEEN   EN Q
Sbjct: 1   MGREIAC-VVENPNDLEMVLNGVSHDKVHGSSKTSEESIDLEEFEDNESSEENSLDENRQ 60

Query: 61  ETDHDVAAIKSSNLDASVPAPVTMPVPAPP----------PPPAPAPTPAAVLVLEEKKK 120
           ET   V AIK++ +DASVP PV +  PAP           P P P   P  VLV EEKKK
Sbjct: 61  ETLDGVLAIKTTIIDASVPIPVPLLAPAPEHEPEHEPEPEPEPEPELVPVPVLVPEEKKK 120

Query: 121 EERTVAQKISDFNKSISPGTVAVTPKIMRVNHKIQQPPVQEPEKAVMCSQTIETE--PTS 180
           EERTVAQKISDFNKSISPGT+AVTPKI+RVNHKIQQP VQ   K  M +QTIETE  PT 
Sbjct: 121 EERTVAQKISDFNKSISPGTIAVTPKIVRVNHKIQQPTVQVLRKGAMYAQTIETERAPTP 180

Query: 181 TTVPVVEASPNTIELQPPSPEKNS 192
           TTV  V ++  T   + P P+ NS
Sbjct: 181 TTVVDVSSNAITSNSKSPGPKDNS 203

The following BLAST results are available for this feature:
BLAST of Cucsat.G19842 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G19842 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139247.11.91e-122100.00protein WVD2-like 1 [Cucumis sativus] >KAE8651555.1 hypothetical protein Csa_019... [more]
KAA0063591.17.82e-10385.79protein WVD2-like 1 [Cucumis melo var. makuwa] >TYK18436.1 protein WVD2-like 1 [... [more]
XP_008456211.12.09e-10286.67PREDICTED: protein WVD2-like 1 [Cucumis melo] >XP_008456216.1 PREDICTED: protein... [more]
XP_038890840.12.58e-8778.65protein WVD2-like 2 [Benincasa hispida] >XP_038890841.1 protein WVD2-like 2 [Ben... [more]
XP_023538034.19.37e-5861.27protein WVD2-like 1 [Cucurbita pepo subsp. pepo][more]
BLAST of Cucsat.G19842 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIB52.68e-122100.00TPX2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010250 PE=3 S... [more]
A0A5D3D4H03.79e-10385.79Protein WVD2-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G... [more]
A0A1S3C3Z41.01e-10286.67protein WVD2-like 1 OS=Cucumis melo OX=3656 GN=LOC103496211 PE=3 SV=1[more]
A0A6J1HMH41.01e-5662.00protein WVD2-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111465541 PE=3 SV=1[more]
A0A6J1FIF33.87e-5661.27protein WVD2-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111444228 PE=3 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 255..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..98
NoneNo IPR availablePANTHERPTHR46372:SF5TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEINcoord: 1..316
IPR027329TPX2, C-terminalPFAMPF06886TPX2coord: 241..310
e-value: 9.3E-23
score: 80.2
IPR044806Protein WAVE-DAMPENED 2-likePANTHERPTHR46372PROTEIN WVD2-LIKE 3coord: 1..316

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G19842.T8Cucsat.G19842.T8mRNA
Cucsat.G19842.T2Cucsat.G19842.T2mRNA
Cucsat.G19842.T1Cucsat.G19842.T1mRNA
Cucsat.G19842.T6Cucsat.G19842.T6mRNA
Cucsat.G19842.T7Cucsat.G19842.T7mRNA
Cucsat.G19842.T4Cucsat.G19842.T4mRNA
Cucsat.G19842.T10Cucsat.G19842.T10mRNA
Cucsat.G19842.T11Cucsat.G19842.T11mRNA
Cucsat.G19842.T13Cucsat.G19842.T13mRNA
Cucsat.G19842.T3Cucsat.G19842.T3mRNA
Cucsat.G19842.T9Cucsat.G19842.T9mRNA
Cucsat.G19842.T12Cucsat.G19842.T12mRNA
Cucsat.G19842.T14Cucsat.G19842.T14mRNA
Cucsat.G19842.T15Cucsat.G19842.T15mRNA
Cucsat.G19842.T5Cucsat.G19842.T5mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000226 microtubule cytoskeleton organization
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005874 microtubule
molecular_function GO:0008017 microtubule binding