Cucsat.G19725 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G19725
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Elf4 domain-containing protein
Location	ctg4: 145202 .. 147472 (+)
RNA-Seq Expression	Cucsat.G19725
Synteny	Cucsat.G19725

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAAACATAGAACCAATCCCCTCCTAATTTCATGAATGCAGCAGAAATGGAAATAATAAATAGGAAATAACAGATGGGGATATTTCATTATTAAATTTTCAATATTATTTTAGGGGTCCGTCTACAAGCGTGACTGTCAAATCTATATATTCTCTCTCTCTCTCTCACTGTTTTTATTATTATTATTATTATTATTTTGTTAATTAGTTTATTTATTTGTCCATCTCTTTCTCCTACTCTCTATCTAGATTTCTCAGAAGAGGTGTCTGCTCCTGAGATTCGATTTAATCGGCGATCTTTTTCCACTGCTCCTCGTGAATCAGACTCCTCTTCCTCCTTCTCTCCCTACAATATAATGTTCCAGATTTTCAAGGTACATCTTTTCTTTTATTTTCAGACCTTTCGAATTTTGTAATTATTACATAATAATCAAACTCAACAACACCACTCTTTTCTTCCCCTTCCCTTATAAATTATATGTATATATATATATAAAAAAAAACTGTGAGTGTCTGTGTTTTTGTTTGTAGTTTTTCTTAGTTGTACATATACGTTAAGATCTTCTATTTTAGATAGTTTTGGAAAAGAAAATAATTAATTAACTTTGGTGTCCCCAGGTAGCGCCTGCAGTCATTAAATTATCTTCCCCTTTTAGTCCTTTATTGTTGTGAAAAGAATTTGAGATTGTTCTTTGATTATTTCTTCTGCTTTGTCTCAATTTGAAGTAATACAGTACCCATTCATATTTTGTTTAAATTAAATGGGGGATTCTCTCTGTTTTTGTTTCTTTTTTAAATAAACATACTAGTTTGTTTATATGTTTATGAATTTCATTCAAATATATTTAATTAGAAATATAGAATATTGGATGAATAATGGTGTGGGTGTCTGTAGCCTTAGCTTCTCTGCATCATTGACTGGGTTTTTTAGTACTGCTTGGAGAGATTCTGAGCTCTAGGTGGGTATTCTCTCAGTACATTAAAAAAAAAGGTTCCTTTTTATGGAAATGAGATTGGGATCTGCTTTTTCTTTCTACATCTCATTATCAAGTAATAATAAAATCTTTTTTTTTTATTTGTTTACATAAATAATAATTTATCTCCTCTCATCATCCATGGAAATGGAGGTGATGATTTCTGCTACAGTTCTTGTCTCATGTGCAGAAATCCGTTTTTTTTTTTTTTTCCCTCCTCAGTTTGGGGGTCATGTTAGTGAAAGGTTGTACAGATAAAGAAGATATGATTATGGTCGTTCATTATTATTATTTTTTAAAAAGGAAACATGCATATGTTGAATTAAGTTATGCAAATTGTAACTAAAAAACTCATCTTTTTATTTTTATTCATTTAAAAAAGGATTGTTATTGGGGAAGTGATTGAGAGAAGAAATAATATGGAGGGGGAGACATTGTCAAGAGGAGAAATTGATGGGAAAATGGTGCAGAGATTTCAAAAGAATTTCGTTCAAGTACAGAACATTTTGGAGCAAAACAGAATGTTGATCAATGAAATAAACCAAAATCAGGAGTCGAGAATGGCGGGTAATGTGAGCAGAAACGTGGGTCTGATTCGAGAGCTGAACAACAACATCAGAAGAGTTGTTGATTTATATGCTGATCTCTCCACTTCCTTCACCAAATCCAACGAACATGGAGACTCCGCGGCCAAGCCTGGCTACAAGCGCAACCGCCCATAGCATAGCAGCAGCTATTACCCCCTTATCCTTCCTCATCTCATTCTTTCCCTTACTACAACCAATAACTTAAATTATTCTAAAACCAAAATATTTCTTTTGTTGGGGGAAATATATTGTGAAGTAATTAGGCAGTGTGTGTGTGTGTGTGTGCACTGTGTGCAGTGTAGGTACTACTCAACTCTATCACTCTTCTCCTATAAACCTCCTTTTGTTCCTCTGCTTTTGTTCTTCACAAAACTCACTGTTTCATCATTTCATTTTCACTGCTAATTAATTTTGTCCATCTTTGTAGAAATTATTGTATTATTATCTCTTTTAAAGAGAAAAAAAAGGTAAATTGTTTGTTGCAAAGACATTTCTCATCTTGGTGTTTGCGAAGATGCTGTGGGTTGAATGAATGATGGCAGCTTTGGAGGGTCTTTTTGGCTCACAGCCACACACCCACCACAACATCAGAATCTCAGATAAGGGATAATGGTCTTTTTGACCCTACCATTCCTCTTACTATTATTTTTATTTCTCAATTTTTTTACCAATGTGCCATCCCTTCCCTACCATTAATTATTACTTGTCT

Coding sequence (CDS)

ATGGAGGGGGAGACATTGTCAAGAGGAGAAATTGATGGGAAAATGGTGCAGAGATTTCAAAAGAATTTCGTTCAAGTACAGAACATTTTGGAGCAAAACAGAATGTTGATCAATGAAATAAACCAAAATCAGGAGTCGAGAATGGCGGGTAATGTGAGCAGAAACGTGGGTCTGATTCGAGAGCTGAACAACAACATCAGAAGAGTTGTTGATTTATATGCTGATCTCTCCACTTCCTTCACCAAATCCAACGAACATGGAGACTCCGCGGCCAAGCCTGGCTACAAGCGCAACCGCCCATAG

Protein sequence

MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP

Homology

[Close]

BLAST of Cucsat.G19725 vs. ExPASy Swiss-Prot
Match: Q8S8F5 (Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.6e-25
Identity = 64/108 (59.26%), Postives = 82/108 (75.93%), Query Frame = 0


Query: 1   MEGETLSR-----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRN 60
           MEG+T+SR      ++DGK++Q F+K+FVQVQNIL+ NR+LINEINQN ES++  N+ RN
Sbjct: 1   MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60

Query: 61  VGLIRELNNNIRRVVDLYADLSTSFTKSNE---HGDSAAKPGYKRNRP 101
           VGLIRELNNN+RRV  LY DLS +F+KS E    GDS+   G +R RP
Sbjct: 61  VGLIRELNNNVRRVAHLYVDLSNNFSKSMEASSEGDSSEGRGNRRIRP 108

[Close]

BLAST of Cucsat.G19725 vs. ExPASy Swiss-Prot
Match: Q570U6 (Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.5e-22
Identity = 57/98 (58.16%), Postives = 70/98 (71.43%), Query Frame = 0


Query: 1  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNV 60
          MEG+ LS    R  +DGK++Q FQK+FV VQ+IL+QNR+LINEINQN ES+   N+ RNV
Sbjct: 1  MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 61 GLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG 95
          GLI+ELNNNIRRV  LY DLS SF +S +        G
Sbjct: 61 GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSG 98

[Close]

BLAST of Cucsat.G19725 vs. ExPASy Swiss-Prot
Match: Q94BS8 (Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.5e-22
Identity = 57/98 (58.16%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 1   MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNV 60
           MEG+  S    R ++DGK++Q FQK+FVQVQ+IL+QNR+LINEINQN ES+ A ++ RNV
Sbjct: 5   MEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNV 64

Query: 61  GLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG 95
           GLIRELNNNIR V  LY DLS SF +S +        G
Sbjct: 65  GLIRELNNNIRTVASLYGDLSHSFARSVDASSEGESTG 102

[Close]

BLAST of Cucsat.G19725 vs. ExPASy Swiss-Prot
Match: O04211 (Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.7e-14
Identity = 44/91 (48.35%), Postives = 63/91 (69.23%), Query Frame = 0


Query: 4   ETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELN 63
           E   +GE D  M +   +NF QVQ++L++NR LI ++N N +SRMA N+S+NV LI+ELN
Sbjct: 15  EEAEQGE-DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELN 74

Query: 64  NNIRRVVDLYADLSTSFTKSNEHGDSAAKPG 95
            NI +VV++Y+DL+TSF+ S  HG      G
Sbjct: 75  GNISKVVNMYSDLNTSFS-SGFHGGKNGHDG 103

[Close]

BLAST of Cucsat.G19725 vs. ExPASy Swiss-Prot
Match: O80877 (Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 8.9e-10
Identity = 35/83 (42.17%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 12  DGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVD 71
           D ++       F + Q  L+QNR LI  +N+N  SR+  NVSRNVGLI E+N NI +V++
Sbjct: 34  DVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLINEINGNISQVME 93

Query: 72  LYADLSTSFTKSNEHGDSAAKPG 95
           +Y+DLS +F K  +      K G
Sbjct: 94  IYSDLSLNFAKKFDQRRRTTKDG 116

[Close]

BLAST of Cucsat.G19725 vs. NCBI nr
Match: KGN60512.1 (hypothetical protein Csa_019281 [Cucumis sativus])

HSP 1 Score: 193 bits (490), Expect = 8.02e-62
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR 60
           MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR
Sbjct: 1   MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR 60

Query: 61  ELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP 100
           ELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP
Sbjct: 61  ELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP 100

[Close]

BLAST of Cucsat.G19725 vs. NCBI nr
Match: KAA0061471.1 (protein ELF4-LIKE 3-like [Cucumis melo var. makuwa] >TYK10803.1 protein ELF4-LIKE 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 182 bits (461), Expect = 2.13e-57
Identity = 95/100 (95.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR 60
           M+GETLSRGEIDGKMVQRFQ NFVQVQNILEQNRMLINEINQNQESRMAG VSRNVGLIR
Sbjct: 1   MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIR 60

Query: 61  ELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP 100
           ELNNNIRRVVDLYADLSTSFT S EHGDSAAKPGYKRNRP
Sbjct: 61  ELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKRNRP 100

[Close]

BLAST of Cucsat.G19725 vs. NCBI nr
Match: XP_038890489.1 (protein ELF4-LIKE 3-like [Benincasa hispida])

HSP 1 Score: 155 bits (391), Expect = 1.38e-46
Identity = 83/107 (77.57%), Postives = 92/107 (85.98%), Query Frame = 0


Query: 1   MEGETLSRG-------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVS 60
           MEGETLS G       E+DGKMVQ FQKNFVQV+NIL+QNR+LINEINQN ES+M  N++
Sbjct: 1   MEGETLSSGGIGKGIREMDGKMVQTFQKNFVQVENILDQNRLLINEINQNHESKMPHNLT 60

Query: 61  RNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP 100
           RNVGLIRELNNNIRRVVDLYADLSTSFTKS + GDSA KPG+KRNRP
Sbjct: 61  RNVGLIRELNNNIRRVVDLYADLSTSFTKSIDDGDSAVKPGHKRNRP 107

[Close]

BLAST of Cucsat.G19725 vs. NCBI nr
Match: XP_022946747.1 (protein ELF4-LIKE 3-like [Cucurbita moschata] >XP_022946748.1 protein ELF4-LIKE 3-like [Cucurbita moschata] >XP_022999232.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >XP_022999233.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >XP_022999234.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >XP_022999235.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >KAG7030507.1 Protein ELF4-LIKE 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 145 bits (367), Expect = 6.45e-43
Identity = 81/109 (74.31%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 1   MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSR 60
           MEGETLS G      ++DGKM Q FQKNFVQVQNIL+QNR+LINEINQN ES+M  N++R
Sbjct: 1   MEGETLSSGGMGNGRQMDGKMAQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLAR 60

Query: 61  NVGLIRELNNNIRRVVDLYADLSTSFTKSNE---HGDSAAKPGYKRNRP 100
           NVGLIRELNNNIRRVVDLYA LS SFTKS E    G+SAAKPG+KRNRP
Sbjct: 61  NVGLIRELNNNIRRVVDLYAHLSASFTKSMEASSEGNSAAKPGHKRNRP 109

[Close]

BLAST of Cucsat.G19725 vs. NCBI nr
Match: XP_023521403.1 (protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023521404.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023546933.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023546934.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 144 bits (362), Expect = 3.72e-42
Identity = 80/109 (73.39%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 1   MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSR 60
           MEGETLS G      ++DGKM   FQKNFVQVQNIL+QNR+LINEINQN ES+M  N++R
Sbjct: 1   MEGETLSSGGMGNGRQMDGKMAHTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLAR 60

Query: 61  NVGLIRELNNNIRRVVDLYADLSTSFTKSNE---HGDSAAKPGYKRNRP 100
           NVGLIRELNNNIRRVVDLYA LS SFTKS E    G+SAAKPG+KRNRP
Sbjct: 61  NVGLIRELNNNIRRVVDLYAHLSASFTKSMEASSEGNSAAKPGHKRNRP 109

[Close]

BLAST of Cucsat.G19725 vs. ExPASy TrEMBL
Match: A0A0A0LIL2 (Elf4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000210 PE=3 SV=1)

HSP 1 Score: 193 bits (490), Expect = 3.88e-62
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR 60
           MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR
Sbjct: 1   MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR 60

Query: 61  ELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP 100
           ELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP
Sbjct: 61  ELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP 100

[Close]

BLAST of Cucsat.G19725 vs. ExPASy TrEMBL
Match: A0A5D3CFW0 (Protein ELF4-LIKE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001190 PE=3 SV=1)

HSP 1 Score: 182 bits (461), Expect = 1.03e-57
Identity = 95/100 (95.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR 60
           M+GETLSRGEIDGKMVQRFQ NFVQVQNILEQNRMLINEINQNQESRMAG VSRNVGLIR
Sbjct: 1   MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIR 60

Query: 61  ELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP 100
           ELNNNIRRVVDLYADLSTSFT S EHGDSAAKPGYKRNRP
Sbjct: 61  ELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKRNRP 100

[Close]

BLAST of Cucsat.G19725 vs. ExPASy TrEMBL
Match: A0A6J1KJ14 (protein ELF4-LIKE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111493668 PE=3 SV=1)

HSP 1 Score: 145 bits (367), Expect = 3.12e-43
Identity = 81/109 (74.31%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 1   MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSR 60
           MEGETLS G      ++DGKM Q FQKNFVQVQNIL+QNR+LINEINQN ES+M  N++R
Sbjct: 1   MEGETLSSGGMGNGRQMDGKMAQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLAR 60

Query: 61  NVGLIRELNNNIRRVVDLYADLSTSFTKSNE---HGDSAAKPGYKRNRP 100
           NVGLIRELNNNIRRVVDLYA LS SFTKS E    G+SAAKPG+KRNRP
Sbjct: 61  NVGLIRELNNNIRRVVDLYAHLSASFTKSMEASSEGNSAAKPGHKRNRP 109

[Close]

BLAST of Cucsat.G19725 vs. ExPASy TrEMBL
Match: A0A6J1G4K6 (protein ELF4-LIKE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111450723 PE=3 SV=1)

HSP 1 Score: 145 bits (367), Expect = 3.12e-43
Identity = 81/109 (74.31%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 1   MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSR 60
           MEGETLS G      ++DGKM Q FQKNFVQVQNIL+QNR+LINEINQN ES+M  N++R
Sbjct: 1   MEGETLSSGGMGNGRQMDGKMAQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLAR 60

Query: 61  NVGLIRELNNNIRRVVDLYADLSTSFTKSNE---HGDSAAKPGYKRNRP 100
           NVGLIRELNNNIRRVVDLYA LS SFTKS E    G+SAAKPG+KRNRP
Sbjct: 61  NVGLIRELNNNIRRVVDLYAHLSASFTKSMEASSEGNSAAKPGHKRNRP 109

[Close]

BLAST of Cucsat.G19725 vs. ExPASy TrEMBL
Match: A0A1U7WX74 (protein ELF4-LIKE 3-like OS=Nicotiana sylvestris OX=4096 GN=LOC104232936 PE=3 SV=1)

HSP 1 Score: 138 bits (348), Expect = 2.04e-40
Identity = 75/104 (72.12%), Postives = 87/104 (83.65%), Query Frame = 0


Query: 1   MEGETLSR----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNV 60
           MEG+TLS      +IDGK+VQ FQKNFVQVQNIL+QNR+LINEINQNQES++  N+SRNV
Sbjct: 1   MEGDTLSGLGNVTQIDGKVVQTFQKNFVQVQNILDQNRLLINEINQNQESKIPDNLSRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP 100
           GLIRELNNNIRRVVDLYADLSTSFTKS ++       G+KR+RP
Sbjct: 61  GLIRELNNNIRRVVDLYADLSTSFTKSVDNSSEGDSSGHKRSRP 104

The following BLAST results are available for this feature:

BLAST of Cucsat.G19725 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8F5	2.6e-25	59.26	Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1	[more]
Q570U6	3.5e-22	58.16	Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1	[more]
Q94BS8	4.5e-22	58.16	Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1	[more]
O04211	2.7e-14	48.35	Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1	[more]
O80877	8.9e-10	42.17	Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1	[more]

BLAST of Cucsat.G19725 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60512.1	8.02e-62	100.00	hypothetical protein Csa_019281 [Cucumis sativus]	[more]
KAA0061471.1	2.13e-57	95.00	protein ELF4-LIKE 3-like [Cucumis melo var. makuwa] >TYK10803.1 protein ELF4-LIK...	[more]
XP_038890489.1	1.38e-46	77.57	protein ELF4-LIKE 3-like [Benincasa hispida]	[more]
XP_022946747.1	6.45e-43	74.31	protein ELF4-LIKE 3-like [Cucurbita moschata] >XP_022946748.1 protein ELF4-LIKE ...	[more]
XP_023521403.1	3.72e-42	73.39	protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023521404.1...	[more]

BLAST of Cucsat.G19725 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIL2	3.88e-62	100.00	Elf4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000210 PE=3 S...	[more]
A0A5D3CFW0	1.03e-57	95.00	Protein ELF4-LIKE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A6J1KJ14	3.12e-43	74.31	protein ELF4-LIKE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111493668 PE=3 SV=1	[more]
A0A6J1G4K6	3.12e-43	74.31	protein ELF4-LIKE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111450723 PE=3 SV=1	[more]
A0A1U7WX74	2.04e-40	72.12	protein ELF4-LIKE 3-like OS=Nicotiana sylvestris OX=4096 GN=LOC104232936 PE=3 SV...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009741	Protein EARLY FLOWERING 4 domain	PFAM	PF07011	Elf4	coord: 11..89 e-value: 3.7E-36 score: 122.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..100
None	No IPR available	PANTHER	PTHR33469:SF17	PROTEIN ELF4-LIKE 3-LIKE	coord: 1..100
IPR040462	Protein EARLY FLOWERING 4	PANTHER	PTHR33469	PROTEIN ELF4-LIKE 4	coord: 1..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G19725.T1	Cucsat.G19725.T1	mRNA
Cucsat.G19725.T3	Cucsat.G19725.T3	mRNA
Cucsat.G19725.T2	Cucsat.G19725.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009649	entrainment of circadian clock
biological_process	GO:0042753	positive regulation of circadian rhythm
cellular_component	GO:0005634	nucleus