Cucsat.G19648 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G19648
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Xyloglucan endotransglucosylase/hydrolase
Location	ctg4: 4078077 .. 4080085 (-)
RNA-Seq Expression	Cucsat.G19648
Synteny	Cucsat.G19648

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTCACGTCAAAACACTTCTCATTACTTTCTTTATAAATATTTTCTTCTCCATACCATTCTTTTCCCATCATAACCAAAACAAGAAAAAAAGAACAAATATCAAGAGCCTAATTAAACCCGCCGCCGCAGATGGCCCGAGCTCTGCCTTTGTATTCAGTAGTTTTGTTAGTTTGTTTATTGGGGTTTGGCAGTGCCGGTGATTTGAACAAGGACTTGGAGATAACATGGGGTGGCGATCGGGCAAAGCTTCTCGATGCCGGTAACACACTGACACTGTCGCTTGATAAAGGCTCCGGCTCCGGCTTCCAATCAAGGAACCAATATTTGTTTGGGAAAATCAACATGCAGATTAAACTCGTCCATGGAAACTCCGCTGGGACTGTCACCGCGTATTATGTAAGCTCTTTAGTTCAATGAAACAATCATAATATGACTGTCTTTTAGTAACCCATATATGGATGAATTTTCAAAGCTACAGGTTAAACCATGAAAGTTTTGAAATTATTTTAAGTTTCATGATTTAATGATTTTTTTCTTCGTTTTAATAATTTCTTCACAAGTTGAGCTATACTTGGCAAACCCTTGCTACAAATTTTTTTGGTAAAATCTTACAAAAACAAACTATTATCTTGGATCCTAACACGAACATAGTTCATCAACATATTGTGTACCCAAGAACCAAGAAGTTTCGAGTTCAAATCTTTCACTCTCAATTTTTCATTGGAAAACATCAAACACTGTTCAATTAAATATATATATTTATAGTTTGTATGATCGGGTGTTTTTAAGTTTAGAGAGATTCAAATTTGTCCCATCTCACACATAAAAACTATTATCTTTTAATATACAAATAAATAATAAGGGTGCTTGGGTGGTGGCAACCTTGTTGGCTCTGTTCTCCCCATGCTTTCCTATCCATCATCATATCTTTTTCAAAAAAAAAAAATGATACACAAACAAATAAGGAATATATTTGTAATCATATTCTATAAATCATACCGTAGGATTGAAGTTTCACACAACCAAATTCATTTGAAATCATTTGTACAGTGAAAACTCCTAAGGAAACAAAACAAAATGTTCTTAGAGAAACCACACATTTAATAAATTAAGTTTTCTGTTTCGTTTTGATAATAATATAAAAATCAGGTTTTGTTAGACCCATGTTTAAATTGCATCATTATTATTCAATTATATGCAAACACTCCATTTTGATTAAAAAGTTTACTACACATCTATGCCATTGGTAGAGAGTTATATATTTTATTTATGTGTAGAGATGTAGCAGATCGTTAGAAATTTATAATAAAATGTTATAAAAGTCTAATAGTTCACAATAATTTCCACCTAAAAAAACCCATTTTGCTTTGAAAATATACCTTTGAGTAAAGTCGAATAAAGTCAATATTTTGGCTGAAAAATTAAAGTGGATTTAAGGTACCAAAGTCCATTAGATTTTTTGTCAACTATTTTAAAGTTCATTCACAAAAAAAAAAGAAAAAAAGGACGACTTGTTACATTGAATTTACATACACCATCCATTATCATTAATAGTAGAGATGACTTGTATAGATACAAAAATATTAAAAGATAATGACAGCAACAAAATTCTACGCTTGATAAAGTCTAAAGATCATCAATTTATAGTTATAAGCTAAAAGGTACGTTTGTGTGTATACATGTGTTAGTTTTGAGACTAAATTATGACTTTTTCCATATCATAGATGTAATTTTACTGATTAGGTTAAACTAAAAGAGGTAAACTACATTTGAATTTTGAGCAATTTAAAAGTATTAATTTGTATGTCATTAATTGCAGTTACGTTCTGATGAGTCAAGATGGGATGAGATAGACTTTGAATTTTTGGGAAACCTTAGTGGTGACCCATACATTGTTCATACAAACATCTTCACTCAAGGCAAAGGTGATAGAGAGCAACAATTTTACCTTTGGTTTGATCCAACTGCTGATTTTCACACTTATTCCTTTCTATGGAATCCCCAAACTATCATGTAAAGTTAACCTTCTACTCCTTGTGATTGCGATTTTGTTTTCATTTTTCTACTTTTGAAATTTAATATTAGGTAATGTAGATTACCTGTTAATTAAAATTAATTGTTAGTAAAGTACTTACGACGAGTAATTTAAGGTAGACGTGGATCTCTTTCTTTCAATACCTCTCAAGATAGTACTTATTTGAGTTCATCTTCTTGAATCTTTTTTTTGTGGGAATTGAGTGTGCCTATATAGACTTCATAGACTAGGCATGTGTATGACTTTGAGCTCTTCTGCAAACTCATTTTGTACTCCTTTTCGAATGAGTGTGATGTTACTTTTGACTTTAGGATTTGACGAGGGTATTGATTAAGAGTGTGTCAACCTTGGTTAAGAAACCCTAGGAAACTAGAGTGTGTTTGCTAATGATCTCTTCTAGCTACCTTAAGTATTTTATTAAAAATATATTTAGGTTAACATTTGAATAAATGTAGTTTAATGTTTGTCAAATCAATATAAACCATGTTGAAGAAAATGTTCAAAATAATATATAATATTCAAAGTTCAAAGGTTATAATGGAATATTATAAGAATAAACTTTTTTAAATTACTAATTGAACAATTAAATTTAATTGTATCATCACTTTAACAAAATTAACTTTTCATCCTCATTTTTTAAAATTATATTTATTATAATCTAAATAAGAACTTAAATCATGTTTTACCAAATCGATCCATTACTTCAATCGAATTTTGATCCTAAACGATCTAAACCTAAAAGCCTAAACTAACATGGCTACAATAAATGTAATTATATCAATAACATTCTCCTTCGCCTTTTTCCTTTGTAGATTCTACGTAGATGGGACTCCCATACGTGAGTTCAAGAACAAAGAATCCAAAGGCATTCCATTCCCCAAAAGCCACCCAATGAGGCTTCAATCAAGTCTATGGAACGCCGACGATTGGGCGACAAGAGGAGGCCGAGTGAAGACCGATTGGACTCAGGCTCCTTTCACTGCCGCCTACCGAAACTTCAACGCCGATCAAGCCTGCATTTGGTCCACCTTGGGCTCCTCCTCTTGCGGCAATGGCTCGTCGAAAAACGATTCTTGGCTGTCCGAACAGTTGGACTCAGCCGGCAGGCAAAGACTTAAGTGGGTACAAAGAAACTACATGGTTTACAATTATTGCACTGATTCTAAGAGGTTCTCTCATGGCCTTCCCCCCGAGTGTAGTGTTTGATGTTTTAATTTGTTGAATATGAATAATTAGTAGGCTTTAAGCCTTGAGTTAATCAATAATGTTTGATTTA

Coding sequence (CDS)

ATGGCCCGAGCTCTGCCTTTGTATTCAGTAGTTTTGTTAGTTTGTTTATTGGGGTTTGGCAGTGCCGGTGATTTGAACAAGGACTTGGAGATAACATGGGGTGGCGATCGGGCAAAGCTTCTCGATGCCGGTAACACACTGACACTGTCGCTTGATAAAGGCTCCGGCTCCGGCTTCCAATCAAGGAACCAATATTTGTTTGGGAAAATCAACATGCAGATTAAACTCGTCCATGGAAACTCCGCTGGGACTGTCACCGCGTATTATTTACGTTCTGATGAGTCAAGATGGGATGAGATAGACTTTGAATTTTTGGGAAACCTTAGTGGTGACCCATACATTGTTCATACAAACATCTTCACTCAAGGCAAAGGTGATAGAGAGCAACAATTTTACCTTTGGTTTGATCCAACTGCTGATTTTCACACTTATTCCTTTCTATGGAATCCCCAAACTATCATATTCTACGTAGATGGGACTCCCATACGTGAGTTCAAGAACAAAGAATCCAAAGGCATTCCATTCCCCAAAAGCCACCCAATGAGGCTTCAATCAAGTCTATGGAACGCCGACGATTGGGCGACAAGAGGAGGCCGAGTGAAGACCGATTGGACTCAGGCTCCTTTCACTGCCGCCTACCGAAACTTCAACGCCGATCAAGCCTGCATTTGGTCCACCTTGGGCTCCTCCTCTTGCGGCAATGGCTCGTCGAAAAACGATTCTTGGCTGTCCGAACAGTTGGACTCAGCCGGCAGGCAAAGACTTAAGTGGGTACAAAGAAACTACATGGTTTACAATTATTGCACTGATTCTAAGAGGTTCTCTCATGGCCTTCCCCCCGAGTGTAGTGTTTGA

Protein sequence

MARALPLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQSRNQYLFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIFTQGKGDREQQFYLWFDPTADFHTYSFLWNPQTIIFYVDGTPIREFKNKESKGIPFPKSHPMRLQSSLWNADDWATRGGRVKTDWTQAPFTAAYRNFNADQACIWSTLGSSSCGNGSSKNDSWLSEQLDSAGRQRLKWVQRNYMVYNYCTDSKRFSHGLPPECSV

Homology

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BLAST of Cucsat.G19648 vs. ExPASy Swiss-Prot
Match: Q38910 (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana OX=3702 GN=XTH23 PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.0e-57
Identity = 104/154 (67.53%), Postives = 124/154 (80.52%), Query Frame = 0


Query: 4   ALPLYSVVLLVCLLGF---GSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQ 63
           A+  YS +++  L  F     + +  +D+EITWG  R ++ + G+ LTLSLDK SGSGFQ
Sbjct: 2   AMISYSTIVVALLASFMICSVSANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQ 61

Query: 64  SRNQYLFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIF 123
           S+N+YLFGKI+MQIKLV GNSAGTVTAYYL+S  S WDEIDFEFLGNLSGDPY +HTN+F
Sbjct: 62  SKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVF 121

Query: 124 TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTIM 155
           TQGKGDREQQF LWFDPT+DFHTYS LWNPQ I+
Sbjct: 122 TQGKGDREQQFKLWFDPTSDFHTYSILWNPQRII 155

[Close]

BLAST of Cucsat.G19648 vs. ExPASy Swiss-Prot
Match: P24806 (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana OX=3702 GN=XTH24 PE=1 SV=2)

HSP 1 Score: 219.2 bits (557), Expect = 3.3e-56
Identity = 96/134 (71.64%), Postives = 114/134 (85.07%), Query Frame = 0


Query: 21  SAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQSRNQYLFGKINMQIKLVHGN 80
           SA D N D+ + WG  R K+L+ G  LTLSLDK SGSGFQS+ +YLFGKI+MQIKLV GN
Sbjct: 20  SAADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGN 79

Query: 81  SAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIFTQGKGDREQQFYLWFDPTAD 140
           SAGTVT +YL+S+ S WDEIDFEFLGN+SGDPY +HTN++TQGKGD+EQQF+LWFDPTA+
Sbjct: 80  SAGTVTTFYLKSEGSTWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHLWFDPTAN 139

Query: 141 FHTYSFLWNPQTIM 155
           FHTYS LWNPQ I+
Sbjct: 140 FHTYSILWNPQRII 153

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BLAST of Cucsat.G19648 vs. ExPASy Swiss-Prot
Match: Q38907 (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana OX=3702 GN=XTH25 PE=2 SV=2)

HSP 1 Score: 213.0 bits (541), Expect = 2.4e-54
Identity = 94/133 (70.68%), Postives = 112/133 (84.21%), Query Frame = 0


Query: 22  AGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQSRNQYLFGKINMQIKLVHGNS 81
           AG  + + +ITWG  R K+L+ G  LTLSLD+ SGSGFQ++ +YLFGKI+MQ+KLV GNS
Sbjct: 27  AGTFDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNS 86

Query: 82  AGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIFTQGKGDREQQFYLWFDPTADF 141
           AGTVTAYYL+S    WDEIDFEFLGNL+GDPY +HTN++TQGKGDREQQF+LWFDPTADF
Sbjct: 87  AGTVTAYYLKSKGDTWDEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADF 146

Query: 142 HTYSFLWNPQTIM 155
           HTYS LWNP  I+
Sbjct: 147 HTYSVLWNPHHIV 159

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BLAST of Cucsat.G19648 vs. ExPASy Swiss-Prot
Match: P35694 (Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.0e-53
Identity = 98/148 (66.22%), Postives = 118/148 (79.73%), Query Frame = 0


Query: 7   LYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQSRNQYL 66
           L  V ++V  +    AG   +D ++TWGGDRAK+ + G  L+LSLDK SGSGF+S+ +YL
Sbjct: 14  LMLVGIVVSTMVATCAGSFYQDFDLTWGGDRAKIFNGGQLLSLSLDKVSGSGFKSKKEYL 73

Query: 67  FGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIFTQGKGD 126
           FG+I+MQ+KLV GNSAGTVTAYYL S     DEIDFEFLGNLSGDPYI+HTNIFTQGKG+
Sbjct: 74  FGRIDMQLKLVAGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNIFTQGKGN 133

Query: 127 REQQFYLWFDPTADFHTYSFLWNPQTIM 155
           REQQFYLWFDPT +FHTYS +W PQ I+
Sbjct: 134 REQQFYLWFDPTRNFHTYSIIWKPQHII 161

[Close]

BLAST of Cucsat.G19648 vs. ExPASy Swiss-Prot
Match: Q9ZV40 (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana OX=3702 GN=XTH21 PE=2 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 7.7e-53
Identity = 91/131 (69.47%), Postives = 108/131 (82.44%), Query Frame = 0


Query: 24  DLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQSRNQYLFGKINMQIKLVHGNSAG 83
           D N+D++ITWG  R  +L+ G  L L LD+ SGSGFQS+ +YL+GK++MQIKLV GNSAG
Sbjct: 27  DFNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAG 86

Query: 84  TVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIFTQGKGDREQQFYLWFDPTADFHT 143
           TVT +YL+S    WDEIDFEFLGN+SGDPYIVHTN++TQGKGDREQQFYLWFDPTA FH 
Sbjct: 87  TVTTFYLKSQGLTWDEIDFEFLGNVSGDPYIVHTNVYTQGKGDREQQFYLWFDPTAAFHN 146

Query: 144 YSFLWNPQTIM 155
           YS LWNP  I+
Sbjct: 147 YSILWNPSHIV 157

[Close]

BLAST of Cucsat.G19648 vs. NCBI nr
Match: CCH26407.1 (xyloglucan endotransglycosylase [Cucumis sativus])

HSP 1 Score: 319 bits (818), Expect = 3.70e-108
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MARALPLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQ 60
           MARALPLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQ
Sbjct: 1   MARALPLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQ 60

Query: 61  SRNQYLFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIF 120
           SRNQYLFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIF
Sbjct: 61  SRNQYLFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIF 120

Query: 121 TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTIM 154
           TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTI+
Sbjct: 121 TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTII 154

[Close]

BLAST of Cucsat.G19648 vs. NCBI nr
Match: XP_004149095.1 (probable xyloglucan endotransglucosylase/hydrolase protein 23 [Cucumis sativus] >KGN61095.1 hypothetical protein Csa_021184 [Cucumis sativus])

HSP 1 Score: 319 bits (818), Expect = 3.70e-108
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MARALPLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQ 60
           MARALPLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQ
Sbjct: 1   MARALPLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQ 60

Query: 61  SRNQYLFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIF 120
           SRNQYLFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIF
Sbjct: 61  SRNQYLFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIF 120

Query: 121 TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTIM 154
           TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTI+
Sbjct: 121 TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTII 154

[Close]

BLAST of Cucsat.G19648 vs. NCBI nr
Match: XP_008452257.1 (PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Cucumis melo] >KAA0067247.1 putative xyloglucan endotransglucosylase/hydrolase protein 23 [Cucumis melo var. makuwa] >TYK10856.1 putative xyloglucan endotransglucosylase/hydrolase protein 23 [Cucumis melo var. makuwa])

HSP 1 Score: 299 bits (766), Expect = 3.02e-100
Identity = 143/154 (92.86%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MARALPLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQ 60
           MA A PLYSVVLLVCL+GF SAGDLNKDLEITWGGDRAKLL+AGNTLTLSLDKGSGSGF+
Sbjct: 1   MAAAPPLYSVVLLVCLMGFASAGDLNKDLEITWGGDRAKLLNAGNTLTLSLDKGSGSGFR 60

Query: 61  SRNQYLFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIF 120
           SRNQYLFGKINMQIKLV GNSAGTV AYYLRSDES+WDEIDFEFLGNLSG+PYIVHTNIF
Sbjct: 61  SRNQYLFGKINMQIKLVPGNSAGTVAAYYLRSDESKWDEIDFEFLGNLSGEPYIVHTNIF 120

Query: 121 TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTIM 154
           TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTI+
Sbjct: 121 TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTII 154

[Close]

BLAST of Cucsat.G19648 vs. NCBI nr
Match: XP_038889745.1 (probable xyloglucan endotransglucosylase/hydrolase protein 23 [Benincasa hispida])

HSP 1 Score: 276 bits (707), Expect = 2.81e-91
Identity = 131/154 (85.06%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 1   MARALPLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQ 60
           M  A PLYSVVL+VCLL   SAGDLN++LEITWGGD+AKLL+ G  LTLSLDK SGSGFQ
Sbjct: 1   MTGAPPLYSVVLVVCLLVLASAGDLNQELEITWGGDQAKLLNGGKVLTLSLDKSSGSGFQ 60

Query: 61  SRNQYLFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIF 120
           SRNQYLFGKI+MQIKLV GNSAGTVTAYYLRS++S+WDE+DFEFLGNLSG+PYIVHTNIF
Sbjct: 61  SRNQYLFGKIDMQIKLVPGNSAGTVTAYYLRSEDSKWDELDFEFLGNLSGEPYIVHTNIF 120

Query: 121 TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTIM 154
           TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTI+
Sbjct: 121 TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTII 154

[Close]

BLAST of Cucsat.G19648 vs. NCBI nr
Match: XP_023536717.1 (xyloglucan endotransglucosylase/hydrolase protein 24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271 bits (693), Expect = 3.20e-89
Identity = 128/154 (83.12%), Postives = 142/154 (92.21%), Query Frame = 0


Query: 1   MARALPLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQ 60
           MA + PL  VVL+VCLLGF  AG+LNK+LEITWGG RAK+++ G  LTLSLDKGSGSGFQ
Sbjct: 1   MAGSPPLCWVVLVVCLLGFAGAGNLNKELEITWGGGRAKIVNGGRMLTLSLDKGSGSGFQ 60

Query: 61  SRNQYLFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIF 120
           SRNQYLFGKI+MQIKLV GNSAGTVT YYLRS++S+WDEIDFEFLGNLSG+PYIVHTNI+
Sbjct: 61  SRNQYLFGKIDMQIKLVAGNSAGTVTTYYLRSEKSKWDEIDFEFLGNLSGEPYIVHTNIY 120

Query: 121 TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTIM 154
           TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTI+
Sbjct: 121 TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTII 154

[Close]

BLAST of Cucsat.G19648 vs. ExPASy TrEMBL
Match: N0DX45 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=xth7 PE=3 SV=1)

HSP 1 Score: 319 bits (818), Expect = 1.79e-108
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MARALPLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQ 60
           MARALPLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQ
Sbjct: 1   MARALPLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQ 60

Query: 61  SRNQYLFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIF 120
           SRNQYLFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIF
Sbjct: 61  SRNQYLFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIF 120

Query: 121 TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTIM 154
           TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTI+
Sbjct: 121 TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTII 154

[Close]

BLAST of Cucsat.G19648 vs. ExPASy TrEMBL
Match: A0A0A0LGP8 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=Csa_2G049350 PE=3 SV=1)

HSP 1 Score: 319 bits (818), Expect = 1.79e-108
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MARALPLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQ 60
           MARALPLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQ
Sbjct: 1   MARALPLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQ 60

Query: 61  SRNQYLFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIF 120
           SRNQYLFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIF
Sbjct: 61  SRNQYLFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIF 120

Query: 121 TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTIM 154
           TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTI+
Sbjct: 121 TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTII 154

[Close]

BLAST of Cucsat.G19648 vs. ExPASy TrEMBL
Match: A0A5D3CK95 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00270 PE=3 SV=1)

HSP 1 Score: 299 bits (766), Expect = 1.46e-100
Identity = 143/154 (92.86%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MARALPLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQ 60
           MA A PLYSVVLLVCL+GF SAGDLNKDLEITWGGDRAKLL+AGNTLTLSLDKGSGSGF+
Sbjct: 1   MAAAPPLYSVVLLVCLMGFASAGDLNKDLEITWGGDRAKLLNAGNTLTLSLDKGSGSGFR 60

Query: 61  SRNQYLFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIF 120
           SRNQYLFGKINMQIKLV GNSAGTV AYYLRSDES+WDEIDFEFLGNLSG+PYIVHTNIF
Sbjct: 61  SRNQYLFGKINMQIKLVPGNSAGTVAAYYLRSDESKWDEIDFEFLGNLSGEPYIVHTNIF 120

Query: 121 TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTIM 154
           TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTI+
Sbjct: 121 TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTII 154

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BLAST of Cucsat.G19648 vs. ExPASy TrEMBL
Match: A0A1S3BTE1 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo OX=3656 GN=LOC103493325 PE=3 SV=1)

HSP 1 Score: 299 bits (766), Expect = 1.46e-100
Identity = 143/154 (92.86%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MARALPLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQ 60
           MA A PLYSVVLLVCL+GF SAGDLNKDLEITWGGDRAKLL+AGNTLTLSLDKGSGSGF+
Sbjct: 1   MAAAPPLYSVVLLVCLMGFASAGDLNKDLEITWGGDRAKLLNAGNTLTLSLDKGSGSGFR 60

Query: 61  SRNQYLFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIF 120
           SRNQYLFGKINMQIKLV GNSAGTV AYYLRSDES+WDEIDFEFLGNLSG+PYIVHTNIF
Sbjct: 61  SRNQYLFGKINMQIKLVPGNSAGTVAAYYLRSDESKWDEIDFEFLGNLSGEPYIVHTNIF 120

Query: 121 TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTIM 154
           TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTI+
Sbjct: 121 TQGKGDREQQFYLWFDPTADFHTYSFLWNPQTII 154

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BLAST of Cucsat.G19648 vs. ExPASy TrEMBL
Match: A0A6J1ENM6 (Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111436263 PE=3 SV=1)

HSP 1 Score: 263 bits (673), Expect = 2.13e-86
Identity = 125/149 (83.89%), Postives = 134/149 (89.93%), Query Frame = 0


Query: 6   PLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQSRNQY 65
           PL  VVL+VCLLGF  A D+N +LEITWGGDRAK LD GN LTLSLDKGSGSGF SRNQY
Sbjct: 7   PLCLVVLVVCLLGFSGAADMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSGFWSRNQY 66

Query: 66  LFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIFTQGKG 125
           LF KI+MQIKLV GNSAGTVTAYYLRS+ES+WDEIDFEFLGNLSG+PYIVHTNIF QGKG
Sbjct: 67  LFAKIDMQIKLVPGNSAGTVTAYYLRSEESKWDEIDFEFLGNLSGEPYIVHTNIFVQGKG 126

Query: 126 DREQQFYLWFDPTADFHTYSFLWNPQTIM 154
           DREQQFYLWFDPTADFHTYSFLWN + I+
Sbjct: 127 DREQQFYLWFDPTADFHTYSFLWNLKNII 155

The following BLAST results are available for this feature:

BLAST of Cucsat.G19648 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38910	3.0e-57	67.53	Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis tha...	[more]
P24806	3.3e-56	71.64	Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana OX=...	[more]
Q38907	2.4e-54	70.68	Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis tha...	[more]
P35694	2.0e-53	66.22	Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q9ZV40	7.7e-53	69.47	Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis tha...	[more]

BLAST of Cucsat.G19648 vs. NCBI nr


Match Name	E-value	Identity	Description
CCH26407.1	3.70e-108	99.35	xyloglucan endotransglycosylase [Cucumis sativus]	[more]
XP_004149095.1	3.70e-108	99.35	probable xyloglucan endotransglucosylase/hydrolase protein 23 [Cucumis sativus] ...	[more]
XP_008452257.1	3.02e-100	92.86	PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Cucumi...	[more]
XP_038889745.1	2.81e-91	85.06	probable xyloglucan endotransglucosylase/hydrolase protein 23 [Benincasa hispida...	[more]
XP_023536717.1	3.20e-89	83.12	xyloglucan endotransglucosylase/hydrolase protein 24-like [Cucurbita pepo subsp....	[more]

BLAST of Cucsat.G19648 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
N0DX45	1.79e-108	99.35	Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=xth7 PE=...	[more]
A0A0A0LGP8	1.79e-108	99.35	Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=Csa_2G04...	[more]
A0A5D3CK95	1.46e-100	92.86	Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3BTE1	1.46e-100	92.86	Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo OX=3656 GN=LOC10349332...	[more]
A0A6J1ENM6	2.13e-86	83.89	Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008264	Beta-glucanase	PRINTS	PR00737	GLHYDRLASE16	coord: 57..75 score: 19.74 coord: 133..150 score: 51.85 coord: 115..128 score: 41.67
IPR010713	Xyloglucan endo-transglycosylase, C-terminal	PFAM	PF06955	XET_C	coord: 238..282 e-value: 4.5E-21 score: 74.4
IPR000757	Glycoside hydrolase family 16	PFAM	PF00722	Glyco_hydro_16	coord: 27..205 e-value: 4.2E-61 score: 205.5
IPR000757	Glycoside hydrolase family 16	PROSITE	PS51762	GH16_2	coord: 1..213 score: 28.194124
IPR016455	Xyloglucan endotransglucosylase/hydrolase	PIRSF	PIRSF005604	EndGlu_transf	coord: 1..284 e-value: 1.2E-114 score: 380.4
IPR016455	Xyloglucan endotransglucosylase/hydrolase	CDD	cd02176	GH16_XET	coord: 21..282 e-value: 7.2251E-147 score: 410.437
None	No IPR available	GENE3D	2.60.120.200		coord: 16..284 e-value: 1.8E-106 score: 357.5
None	No IPR available	PANTHER	PTHR31062:SF147	XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE	coord: 9..284
IPR044791	Beta-glucanase/XTH	PANTHER	PTHR31062	XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED	coord: 9..284
IPR008263	Glycoside hydrolase, family 16, active site	PROSITE	PS01034	GH16_1	coord: 99..109
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	SUPERFAMILY	49899	Concanavalin A-like lectins/glucanases	coord: 28..283

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G19648.T1	Cucsat.G19648.T1	mRNA
Cucsat.G19648.T2	Cucsat.G19648.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042546	cell wall biogenesis
biological_process	GO:0071555	cell wall organization
biological_process	GO:0010411	xyloglucan metabolic process
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0006073	cellular glucan metabolic process
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005618	cell wall
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0016762	xyloglucan:xyloglucosyl transferase activity