Cucsat.G19458 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGATGCGACAGGGACCTGCATCGGCAGCTCGTTCGGCGTTGTTTGGCGGCGTTCTGTTAGCTTTGATTGAAGGAGCTGGAATTATGCTCAACAAAGTTCTGAGCCAGCAACAGAATATGCCTGTTGTGATTGAGGAGCCTGCTGGTATGGGTGGTGTGCCTGGGTATCCTACAGGCCAGTTACCTGGCCGTGCTCCTCCCATGTCTCTACCACAAGCTGAATTAGCAAGTATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGATTCTGGTAATGGCTCGTGGTTTGGAGGTTGGTTTGGCGGAGGTAAGAAGAAGGAATCAGAAGTATCGAGTGGAGGAAGCGAGACGACGATTTTGGAGAGCTTCGATGCACCGCCTGTGCCAAATTTTGAGTTTAAGTAAAATATTTATATCTGGGGTTTAAGGCTTGAGATAAGCTGAGATTTTTATATAAGTAGACAATGAATTCAATTGTAGAATGTATGGTGTGTGTTATAGCCGCCTTATAGGTTACTTCTAATTAACGATTATCGTGCAATCAGCTGACATTGTTCTGAAGTTATCAAATTATCATTCAGGTTATGCTGAATTGTACAATAAGCTTGTAGGCTTTAGTATTGGTATTATTTTCTGTTGTAAATAAACTACCACTTTATGGGTCTGATTCATATCTTTTTTAGTCATGATCTGATTATATTGTTGGTTGCTAGCATGCTTATAAACTCAAGTTCAATTGTAGCATCCATCGATAAGAAAGCTGTGTACTGCATATACCCAACAAAAGGAAAGGTTGTAATAGTTTGGATTTTTCAGGTATGCATTTGTTTTAGTTCAAAAACATTTGAGGTTGTAAATGGATGCATCTATTTTGTTTTTGTGGAGCATGGTTGGAATGACTCTCTTAGCAAATACACCTTTTGCTTTTGTGCAGATACTTTTGATGTTAATTGAATATCTCTTTTTTTCTCATTTGTTTTTGTTAGAGTAGAGAAAAATTTTCAAAGGCTTCTTTGCGAAATCATATTGTAGATTGCCCCCTATCAAGTTGTTGTGGTTGTATGAATGGTTTAGAAGTTGAAGACAGCCATTCTTTGTTTTTCTGATGGTTTATTTTATCTGTTGATGTTGATGTCTAGCATTATGTTGTTGATACTCTGCACATCAGAGTTTTCTGCTGCATTTTACAGTTGGCTTCAATATGGTGTTGGAATTTGATAATTGACCTGTTCATTGTGCATGAATGAGTTTGCATAGACGGTACGGAACAGATTGATTGACACCATGGATTCAATAGTAC ATGCGACAGGGACCTGCATCGGCAGCTCGTTCGGCGTTGTTTGGCGGCGTTCTGTTAGCTTTGATTGAAGGAGCTGGAATTATGCTCAACAAAGTTCTGAGCCAGCAACAGAATATGCCTGTTGTGATTGAGGAGCCTGCTGGTATGGGTGGTGTGCCTGGGTATCCTACAGGCCAGTTACCTGGCCGTGCTCCTCCCATGTCTCTACCACAAGCTGAATTAGCAAGTATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGATTCTGGTAATGGCTCGTGGTTTGGAGGTTGGTTTGGCGGAGGTAAGAAGAAGGAATCAGAAGTATCGAGTGGAGGAAGCGAGACGACGATTTTGGAGAGCTTCGATGCACCGCCTGTGCCAAATTTTGAGTTTAAGTAA MRQGPASAARSALFGGVLLALIEGAGIMLNKVLSQQQNMPVVIEEPAGMGGVPGYPTGQLPGRAPPMSLPQAELASISSSSSSSSSSDSGNGSWFGGWFGGGKKKESEVSSGGSETTILESFDAPPVPNFEFK Homology
BLAST of Cucsat.G19458 vs. ExPASy Swiss-Prot
Match: Q9SP35 (Mitochondrial import inner membrane translocase subunit TIM17-2 OS=Arabidopsis thaliana OX=3702 GN=TIM17-2 PE=1 SV=2) HSP 1 Score: 112.1 bits (279), Expect = 4.9e-24 Identity = 75/143 (52.45%), Postives = 95/143 (66.43%), Query Frame = 0
BLAST of Cucsat.G19458 vs. ExPASy Swiss-Prot
Match: Q9LN27 (Mitochondrial import inner membrane translocase subunit TIM17-1 OS=Arabidopsis thaliana OX=3702 GN=TIM17-1 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 4.5e-17 Identity = 64/133 (48.12%), Postives = 79/133 (59.40%), Query Frame = 0
BLAST of Cucsat.G19458 vs. ExPASy Swiss-Prot
Match: Q9Z0V7 (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Mus musculus OX=10090 GN=Timm17b PE=1 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 2.3e-05 Identity = 28/64 (43.75%), Postives = 39/64 (60.94%), Query Frame = 0
BLAST of Cucsat.G19458 vs. ExPASy Swiss-Prot
Match: O60830 (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Homo sapiens OX=9606 GN=TIMM17B PE=1 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 3.0e-05 Identity = 28/64 (43.75%), Postives = 40/64 (62.50%), Query Frame = 0
BLAST of Cucsat.G19458 vs. ExPASy Swiss-Prot
Match: Q2HJE9 (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Bos taurus OX=9913 GN=TIMM17B PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 4.4e-04 Identity = 29/65 (44.62%), Postives = 39/65 (60.00%), Query Frame = 0
BLAST of Cucsat.G19458 vs. NCBI nr
Match: TYK10745.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucumis melo var. makuwa]) HSP 1 Score: 246 bits (629), Expect = 2.04e-80 Identity = 133/136 (97.79%), Postives = 133/136 (97.79%), Query Frame = 0
BLAST of Cucsat.G19458 vs. NCBI nr
Match: XP_004141020.2 (mitochondrial import inner membrane translocase subunit TIM17-2 [Cucumis sativus] >KGN60582.1 hypothetical protein Csa_019226 [Cucumis sativus]) HSP 1 Score: 246 bits (628), Expect = 2.54e-80 Identity = 132/133 (99.25%), Postives = 132/133 (99.25%), Query Frame = 0
BLAST of Cucsat.G19458 vs. NCBI nr
Match: XP_008458824.1 (PREDICTED: mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucumis melo] >KAA0061526.1 mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucumis melo var. makuwa]) HSP 1 Score: 244 bits (624), Expect = 9.97e-80 Identity = 131/133 (98.50%), Postives = 131/133 (98.50%), Query Frame = 0
BLAST of Cucsat.G19458 vs. NCBI nr
Match: XP_038891186.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Benincasa hispida]) HSP 1 Score: 240 bits (612), Expect = 6.89e-78 Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 0
BLAST of Cucsat.G19458 vs. NCBI nr
Match: XP_022946753.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita moschata] >KAG6599481.1 Mitochondrial import inner membrane translocase subunit TIM17-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030456.1 Mitochondrial import inner membrane translocase subunit TIM17-2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 234 bits (596), Expect = 1.87e-75 Identity = 125/133 (93.98%), Postives = 128/133 (96.24%), Query Frame = 0
BLAST of Cucsat.G19458 vs. ExPASy TrEMBL
Match: A0A5D3CGV0 (Mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00580 PE=4 SV=1) HSP 1 Score: 246 bits (629), Expect = 9.88e-81 Identity = 133/136 (97.79%), Postives = 133/136 (97.79%), Query Frame = 0
BLAST of Cucsat.G19458 vs. ExPASy TrEMBL
Match: A0A0A0LIR2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000890 PE=4 SV=1) HSP 1 Score: 246 bits (628), Expect = 1.23e-80 Identity = 132/133 (99.25%), Postives = 132/133 (99.25%), Query Frame = 0
BLAST of Cucsat.G19458 vs. ExPASy TrEMBL
Match: A0A5A7V4X7 (Mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00870 PE=4 SV=1) HSP 1 Score: 244 bits (624), Expect = 4.83e-80 Identity = 131/133 (98.50%), Postives = 131/133 (98.50%), Query Frame = 0
BLAST of Cucsat.G19458 vs. ExPASy TrEMBL
Match: A0A1S3C8A4 (mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucumis melo OX=3656 GN=LOC103498112 PE=4 SV=1) HSP 1 Score: 244 bits (624), Expect = 4.83e-80 Identity = 131/133 (98.50%), Postives = 131/133 (98.50%), Query Frame = 0
BLAST of Cucsat.G19458 vs. ExPASy TrEMBL
Match: A0A6J1G4Q2 (mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbita moschata OX=3662 GN=LOC111450727 PE=4 SV=1) HSP 1 Score: 234 bits (596), Expect = 9.03e-76 Identity = 125/133 (93.98%), Postives = 128/133 (96.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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