Cucsat.G19034 (gene) Cucumber (B10) v3

Overview
NameCucsat.G19034
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionAnaphase-promoting complex subunit 13
Locationctg35: 302885 .. 305684 (-)
RNA-Seq ExpressionCucsat.G19034
SyntenyCucsat.G19034
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCACTCACTCAAACTCTCAGCATTTCAAACAAGAACTTGGGCTTTAAAAGCCCAAAGTTGGCCTACTTTAGAAATGGATGGTACTGCGTGTGCCTAAGGCAGAAGACACCGTCCCCCGTCCTCAACTTCCCGCCTCAATTGAACCTTCATCCGTCTTTGTCGTCCCTTCACGCAAGATTTCCACGCTGCCATTCCTCTTCATCAGTCACCCACTACTCGCTCACGACTCATCGACATTCCAGATCGCTCAGGCCACTGGTTGGTGATTTGTCTCAGATCCGGCTGCATTCGGTCTCCGCCCTTCGATCCTTGACTCCAACGTTGGTAAGCATCGCTTTCCCCTCATATTTAATTTGTTTCATGACCTTCGTAACCCAACATGAGACACTTCCTCTAGATTTCCCCCATTTCGTTCTTCAAAACTGAAGAAATATTTGAATACCCATAATCTTGAAATCACAAAACTTCACAAATAAATGGTAATAATAGAAGCTGGAAGGTTGTCTGCTCCTTCAATCTTCCTTGCTTGCCAATTCACTATCTTCTCCTCAACTTCATTATATCAAACGTTCCCTTTCAACAAAATTAAACTATTAGAAGATTAAGCATGCGGAGGATTCTCCAGCTGAACATAAATTTCCACCCTCCATTCTACTTCCAAATTTTCATAATACGCTCCGTCTTGTTCCAATTTGGACGTATTTGGAAAATTATTTTTGGAATTGATCGACATTTAGTAAATTTTTGGAGCTTTTGTTAATAACTTATGAACTTATCTATCTGGAATTTCAGATATTGGGTTTTAGAATCTACCTTAATAAGAAAACACCAATGGCAGAACTTAGTCTGGGTATATTGATAGACATTCTAGATGAGGAATGGATGAGAGACACACTCCCTCATGATGGTAATTCTCAATCTTCATTTCTCTACAATCAAGAAATTAATTGTAACAAGCTATATGGCTTATTTAATCTAGTTTTTCTATCATTATCGTAGATCTTTTACTCCCTCCCGTGCTGGTTGTTCGGGCTGATGACACCGAGGACTCAAGTATGTCTCTAACTTCTAACTCAATGTTCGGTTAATAACACATGGAAAGATTATTCCTTTAATTTTGGTAACACATTCTAACCTGAAGCATGTTTTTGCACTTGATATTAAATTTGGTACATGGGAGTTCCTAAGTCAAGAATCAATGAGTCTGCAATGCTTTCATAGTGTTTTCGTAACTTCTGAAAATGGAAAGCAGGATGCTACAAATCTTGTTTTCTATTTCTTTTTATATTCGCGAGTTTCTAGGCCAATTTACGCCTATCGGCTATCGCAACAAATCTCACTTGTAGGATATAAAATCCTATGTAGGCTACAATCCATTTCTCTTAACCCTTTATCAAACTCAATACCCTTTATTACCATCGGCTCAACCCATGAAGATGCTTCAAAGTTAAATGTAATACTTGAGAGCGAAATGGTTGCAAAAAGTTTGTATCCTAGATTTTTCGAAGGCTCATTAAGCTAGCACTAAGAGACAACAAAAGCTTTTAATTTAATGATTTTACAACCGAAAAATTTATGTCCTAGATTTTGAAGGTATCTCCCAACATCAAAAGTGCTTACTACCACCCCTACAATCCCAATGCCCTTCAAGGTCTTAAATTCTTGTTTTACACCTGAAGGCTCAAGCTCAAGACAGCCGTTCATTCCCCTCATTATCACCTTTTGAGTTTTGGCCTCTGAATATATTTTCTTCTACTTTTTGTCTTGTGGCTTAATGGTTATCGTGCAGTTGTGAAAATTGTGAATAGGAAGTAATAAACCGATCTTTAATCACTCTGTTAGAAGCACTAAAGAGCTTAGGATGGTTATTTTTGTCTCTACTTCTTACCGTCTCTAGTCTAAGTTTTTGTTGTAACTGTAATTATTGCTAAGTATTGCTTGTGTCAAGTGAGAAACCTTCACTGTAATTCTAAGCTTGTCTAGGTACGTCTCTTAAAAATGAAAATATCCTTTTGGACTTCCTAATTCACCACTTTCCTGATACCTCTTTGTTTTATTTCTTCTTCTTTCTGTCATCTATGATGTTGACACCATAAAGTGCATCTTTCACTTAAAAAACACCATTCAATACTGATAATATGAAAATCAATTAGTTTTTTCTCTCTATTTTTGGCTTGCCAATTGTAGCAATTTGCAGGAGAATTCATTTTTTGATCCCCTTTTTCTCTTAACTTCTTTGCAGATCAGGAGACTCAGCCAGTTGATACTGATACTTGGCATGATCTTGCCTTAGGTAACCAATGAACCGCCTTCTCCTAACTAAGGGTTGTCTGTTTTCAAGAAACTTGCTTCGAGTTATAAATTTTATTATCAAATTCTCTTGCGGTATTTGTATCGTAGATTGTCATATTTCACTAAAATCCATGTTGTAGAGTTAGGTAGAAAGTGTTTGTTTGTGGTAAAAGAAATTATGTACATGTTGGTGGCAGTCAGTTAAGACTATTGATGGATTTGCTGTTCTCTTTTGTAATTTGTTGTGTGAAGACAGATTGAAATGTTATTTCTTATTATGAGATCTTTGTTCAATTCCACTTGGAAAAAACTTTAGAGTTGCTTCTAAACTTAATGGTTTTAAAAGGAGTACTACCATCAGATTGTTTTGGTCCTTCGGTAAAGAAGATTTTAATTATTCCTCCATGTCTTAAGAGTTTGTTTCAGCATTCATTTTCTAAGAACATGTTTTATTTTATTTTACTTTTCAAATCAAGAGAACTTATGTTAAATGCTCAACTTACTTTTGAAATGTTTGTTTTAGTTCCTTGTGTTCATTTATTTCATTAATTTTCAAAATGTTAAGGAGTTCATGGATTAATAATGTGGCTTCTTAGTTAGCTTTGCGCCAAACTGATAGACAATTGGTAAAAAAATTATGAAAACACAAATAACTTTAATACATATGAAAATCAGTAAGTAGAACAATTTCCCATGATATTTTGTATAATTTAGCCTATGTAGAATCAATTTAAATTAATTAGTTTAGGGTTTTTAACATTACGAGCTTTTTGTATAGGTTACGAGTTACCCATCACAAACGCCCATCAGGGTTACGATATAAATATTATGTGCAACACATGAGTTGCAAAAATGTAAATTTTTATAAACCGAGGGAACCAATTAAGCATTGAAAAACTAGCGGAATCGATTTCATCATCAATTCAACTGAACGACAAGCAGTTTCCTACAAGTGAGAGCCCATTTTTTCCAACGTCATTTGGAATCTTTTTTAATAATATAATTTTAAAAATAATGTAAAAAATAGGGTAGACGATTCACAATGCTGAAGTCATGTATAGGGTACACGACTTTGGCCACACTATGGCAGTAAATGCTTCCGTTGATTGTTCATCTGTCCAGCATGCAAGGAGTCGTGTACGGTACACGACTTCGTCACTTTAAATTAGCCCTAGCCGCCGAGCATTCTGCCTTCCATCTTCAATTTCATTTAGCCTTCCATTTTCTATTTCCATATTTAATCTCCCTTCCATCTGAATCCGCCTTCCACCATCTTCCTTATGCCTTCCATCTTCATTCGTCCTCCCTTGCAGAAAATCCATCTGCTGTCCATAAGGTATATTTATTTTCACTTCCCGCCCCCTATCCCATTTACCATCCCTATGAATTTTCCCACAAGGAATGGGGCAGGGATTCCATGAGGATTGGTTCCCTGCTAGAAAATATTTTCCACTTTTGTTTTAAATTTTTTTGATTTGTTTTTTGTTTTTCATAAATAAATATAAATAACTAAGAAAAGTAAAATTTTGCGTAAGTGTTAAAGAGAATACATTTTGACTGAAACTAGGCGATAAGAGTTGGTATTTGAGTAGTTCGCGAGAAAGAGTTATGTGATAGGATGTTTGGCATCTTAGTACAACTAGGCGATTAAAGTCTTCACGAGTTGGAACTAGACGTTGAAGAAATGAAACTTCTGAAAATTTTCATAAGTTTACTTAATGGGTCACGTGTGAAGGTTTTAAGCTAAGCAGGATTAAGTGAAACCTTAAACTTACACAAGTACCATAGAGTAGGAGCTGGCAAAATGATAAGAGTTTAAAGGTGACTAATCCATTTTAGGATTAGTATAAATAGGGGGATGAAGTCAGATTGTCAAGTATTGTTACTTTGAAAAATTGAAGAGAAAAGCGAAGTGTTGAAGTGTTGCTGAAGTGACTACACGAGAAGGAGAAGAAGAGGGGCATTTAGAGTATGTGTTTCTAAGTTGTGTGAGTGTTTTTCCTCAAAGTATTTTATATGTTTGAAAGGTTTTCTTTAAAGTCTTTATTGATTTGAAACGACAATTTCAATATGAATGTTTCCAAAGAGATTCATATGAAAAGCTTATGCTATGTTTCAAAGTATATTTTATGTTATACTAATGATTTGTGAAATAATGTTTAAACCATTAGTCTTCATCCTATCATTGAGCTAACTGTTATGTGCACATAAAGAGTAAACACATTATGTATAAAAGACTTGCATGGTGGAATGAGGCTAGACAATGCTTAAAAATGTGTATTGCACTTCGACCTAAGTAACAGAGAATGAATCAGAATATTCTCGAATGTTATTGAAGAGAAGGTCATCATAGTAGTCTAAACGGTAGATGATGAGTCTTAGCGTGGAGAATGATTCAGCTTCTTGGCGAAAGAAATGCTAATAGACTAGTGTGTGTTTATGTGAAGTTATATGTTTATGCAATATAATTTATTTACGTGAAAAGATGTGTTTAAGCAATTTAATGTGAACAAAAGATGTTACCAAAGGTATTTCATGAAAAGGTTTTTCTAAAAGATCTCACCGAGTCTTTTGACTAACGTTTTTAAGTTTTATCTACCAGGTTTCAGGCGTTAAGGCCAAGTAAAGAAATGATGAGAAGCTTGATAAGCGAGAAGGGTTGTCGAGGCGTTTAGTTTAAGCTTAAGTGTTGCTTTTGTATTTTTGTTAAGAGTTATAA

Coding sequence (CDS)

TCACTCACTCAAACTCTCAGCATTTCAAACAAGAACTTGGGCTTTAAAAGCCCAAAGTTGGCCTACTTTAGAAATGGATGGTACTGCGTGTGCCTAAGGCAGAAGACACCGTCCCCCGTCCTCAACTTCCCGCCTCAATTGAACCTTCATCCGTCTTTGTCGTCCCTTCACGCAAGATTTCCACGCTGCCATTCCTCTTCATCAGTCACCCACTACTCGCTCACGACTCATCGACATTCCAGATCGCTCAGGCCACTGGTTGGTGATTTGTCTCAGATCCGGCTGCATTCGGTCTCCGCCCTTCGATCCTTGACTCCAACGTTGATATTGGGTTTTAGAATCTACCTTAATAAGAAAACACCAATGGCAGAACTTAGTCTGGGTATATTGATAGACATTCTAGATGAGGAATGGATGAGAGACACACTCCCTCATGATGATCTTTTACTCCCTCCCGTGCTGGTTGTTCGGGCTGATGACACCGAGGACTCAAATCAGGAGACTCAGCCAGTTGATACTGATACTTGGCATGATCTTGCCTTAGGTTTCAGGCGTTAA

Protein sequence

SLTQTLSISNKNLGFKSPKLAYFRNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGFRR
Homology
[Close]
BLAST of Cucsat.G19034 vs. ExPASy Swiss-Prot
Match: Q8L981 (Anaphase-promoting complex subunit 13 OS=Arabidopsis thaliana OX=3702 GN=APC13 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.4e-20
Identity = 46/63 (73.02%), Postives = 53/63 (84.13%), Query Frame = 0 

Query: 159 MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL 218
           MAE+SLG+LIDI+DEEWMRDTLP DDL LPPVL V+ DDTE++NQETQ  D +TW DLAL
Sbjct: 1   MAEVSLGMLIDIVDEEWMRDTLPDDDLPLPPVLAVKTDDTEETNQETQQADAETWRDLAL 60

Query: 219 GNQ 222
             Q
Sbjct: 61  DTQ 63

[Close]
BLAST of Cucsat.G19034 vs. NCBI nr
Match: KGN63398.1 (hypothetical protein Csa_022587 [Cucumis sativus])

HSP 1 Score: 448 bits (1153), Expect = 5.64e-159
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0 

Query: 1   MTRITINNDTCIVCRRNYITFSFSSFATPYFRSPLLYSLTQTLSISNKNLGFKSPKLAYF 60
           MTRITINNDTCIVCRRNYITFSFSSFATPYFRSPLLYSLTQTLSISNKNLGFKSPKLAYF
Sbjct: 1   MTRITINNDTCIVCRRNYITFSFSSFATPYFRSPLLYSLTQTLSISNKNLGFKSPKLAYF 60

Query: 61  RNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSL 120
           RNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSL
Sbjct: 61  RNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSL 120

Query: 121 RPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTL 180
           RPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTL
Sbjct: 121 RPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTL 180

Query: 181 PHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ 221
           PHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ
Sbjct: 181 PHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ 221

[Close]
BLAST of Cucsat.G19034 vs. NCBI nr
Match: XP_008459198.1 (PREDICTED: uncharacterized protein LOC103498390 [Cucumis melo])

HSP 1 Score: 259 bits (663), Expect = 2.82e-85
Identity = 132/152 (86.84%), Postives = 139/152 (91.45%), Query Frame = 0 

Query: 70  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQ 129
           +++  +PVLN  PQL LHPSLSSL+ARFPR HSSSSV HY LTTH HSRSLR LVGDLSQ
Sbjct: 7   KEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQ 66

Query: 130 IRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP 189
           IRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP
Sbjct: 67  IRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP 126

Query: 190 VLVVRADDTEDSNQETQPVDTDTWHDLALGNQ 221
           VLVVRADDTEDSNQE+QPVDTDTWHDLALGNQ
Sbjct: 127 VLVVRADDTEDSNQESQPVDTDTWHDLALGNQ 158

[Close]
BLAST of Cucsat.G19034 vs. NCBI nr
Match: KAA0042977.1 (anaphase-promoting complex subunit 13 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 257 bits (656), Expect = 3.17e-84
Identity = 130/149 (87.25%), Postives = 136/149 (91.28%), Query Frame = 0 

Query: 70  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQ 129
           +++  +PVLN  PQL  HPSLSSL ARFPR HSSSSV HYSLTTH HSRSLRPLVGDLSQ
Sbjct: 7   KEEDTAPVLNSQPQLKFHPSLSSLTARFPRRHSSSSVAHYSLTTHWHSRSLRPLVGDLSQ 66

Query: 130 IRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP 189
           IRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP
Sbjct: 67  IRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP 126

Query: 190 VLVVRADDTEDSNQETQPVDTDTWHDLAL 218
           VLVVRADDTEDSNQE+QPVDTDTWHDLAL
Sbjct: 127 VLVVRADDTEDSNQESQPVDTDTWHDLAL 155

[Close]
BLAST of Cucsat.G19034 vs. NCBI nr
Match: TYK11109.1 (anaphase-promoting complex subunit 13 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 253 bits (647), Expect = 7.41e-83
Identity = 129/149 (86.58%), Postives = 136/149 (91.28%), Query Frame = 0 

Query: 70  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQ 129
           +++  +PVLN  PQL LHPSLSSL+ARFPR HSSSSV HY LTTH HSRSLR LVGDLSQ
Sbjct: 7   KEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQ 66

Query: 130 IRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP 189
           IRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP
Sbjct: 67  IRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP 126

Query: 190 VLVVRADDTEDSNQETQPVDTDTWHDLAL 218
           VLVVRADDTEDSNQE+QPVDTDTWHDLAL
Sbjct: 127 VLVVRADDTEDSNQESQPVDTDTWHDLAL 155

[Close]
BLAST of Cucsat.G19034 vs. NCBI nr
Match: XP_004148091.1 (anaphase-promoting complex subunit 13 [Cucumis sativus])

HSP 1 Score: 132 bits (331), Expect = 3.60e-36
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 159 MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL 218
           MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL
Sbjct: 1   MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL 60

Query: 219 GNQ 221
           GNQ
Sbjct: 61  GNQ 63

[Close]
BLAST of Cucsat.G19034 vs. ExPASy TrEMBL
Match: A0A0A0LNL0 (Anaphase-promoting complex subunit 13 OS=Cucumis sativus OX=3659 GN=Csa_2G437080 PE=3 SV=1)

HSP 1 Score: 448 bits (1153), Expect = 2.73e-159
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0 

Query: 1   MTRITINNDTCIVCRRNYITFSFSSFATPYFRSPLLYSLTQTLSISNKNLGFKSPKLAYF 60
           MTRITINNDTCIVCRRNYITFSFSSFATPYFRSPLLYSLTQTLSISNKNLGFKSPKLAYF
Sbjct: 1   MTRITINNDTCIVCRRNYITFSFSSFATPYFRSPLLYSLTQTLSISNKNLGFKSPKLAYF 60

Query: 61  RNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSL 120
           RNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSL
Sbjct: 61  RNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSL 120

Query: 121 RPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTL 180
           RPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTL
Sbjct: 121 RPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTL 180

Query: 181 PHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ 221
           PHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ
Sbjct: 181 PHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ 221

[Close]
BLAST of Cucsat.G19034 vs. ExPASy TrEMBL
Match: A0A1S3CA59 (Anaphase-promoting complex subunit 13 OS=Cucumis melo OX=3656 GN=LOC103498390 PE=3 SV=1)

HSP 1 Score: 259 bits (663), Expect = 1.37e-85
Identity = 132/152 (86.84%), Postives = 139/152 (91.45%), Query Frame = 0 

Query: 70  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQ 129
           +++  +PVLN  PQL LHPSLSSL+ARFPR HSSSSV HY LTTH HSRSLR LVGDLSQ
Sbjct: 7   KEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQ 66

Query: 130 IRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP 189
           IRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP
Sbjct: 67  IRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP 126

Query: 190 VLVVRADDTEDSNQETQPVDTDTWHDLALGNQ 221
           VLVVRADDTEDSNQE+QPVDTDTWHDLALGNQ
Sbjct: 127 VLVVRADDTEDSNQESQPVDTDTWHDLALGNQ 158

[Close]
BLAST of Cucsat.G19034 vs. ExPASy TrEMBL
Match: A0A5A7TMF9 (Anaphase-promoting complex subunit 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00500 PE=3 SV=1)

HSP 1 Score: 257 bits (656), Expect = 1.53e-84
Identity = 130/149 (87.25%), Postives = 136/149 (91.28%), Query Frame = 0 

Query: 70  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQ 129
           +++  +PVLN  PQL  HPSLSSL ARFPR HSSSSV HYSLTTH HSRSLRPLVGDLSQ
Sbjct: 7   KEEDTAPVLNSQPQLKFHPSLSSLTARFPRRHSSSSVAHYSLTTHWHSRSLRPLVGDLSQ 66

Query: 130 IRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP 189
           IRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP
Sbjct: 67  IRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP 126

Query: 190 VLVVRADDTEDSNQETQPVDTDTWHDLAL 218
           VLVVRADDTEDSNQE+QPVDTDTWHDLAL
Sbjct: 127 VLVVRADDTEDSNQESQPVDTDTWHDLAL 155

[Close]
BLAST of Cucsat.G19034 vs. ExPASy TrEMBL
Match: A0A5D3CLL3 (Anaphase-promoting complex subunit 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00110 PE=3 SV=1)

HSP 1 Score: 253 bits (647), Expect = 3.59e-83
Identity = 129/149 (86.58%), Postives = 136/149 (91.28%), Query Frame = 0 

Query: 70  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQ 129
           +++  +PVLN  PQL LHPSLSSL+ARFPR HSSSSV HY LTTH HSRSLR LVGDLSQ
Sbjct: 7   KEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQ 66

Query: 130 IRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP 189
           IRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP
Sbjct: 67  IRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP 126

Query: 190 VLVVRADDTEDSNQETQPVDTDTWHDLAL 218
           VLVVRADDTEDSNQE+QPVDTDTWHDLAL
Sbjct: 127 VLVVRADDTEDSNQESQPVDTDTWHDLAL 155

[Close]
BLAST of Cucsat.G19034 vs. ExPASy TrEMBL
Match: A0A6J1JH61 (Anaphase-promoting complex subunit 13 OS=Cucurbita maxima OX=3661 GN=LOC111484329 PE=3 SV=1)

HSP 1 Score: 126 bits (317), Expect = 2.27e-34
Identity = 60/63 (95.24%), Postives = 60/63 (95.24%), Query Frame = 0 

Query: 159 MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL 218
           MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVR DDTEDSNQE QPVD DTWHDLAL
Sbjct: 1   MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRTDDTEDSNQEAQPVDADTWHDLAL 60

Query: 219 GNQ 221
           GNQ
Sbjct: 61  GNQ 63

The following BLAST results are available for this feature:
BLAST of Cucsat.G19034 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8L9819.4e-2073.02Anaphase-promoting complex subunit 13 OS=Arabidopsis thaliana OX=3702 GN=APC13 P... [more]
BLAST of Cucsat.G19034 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63398.15.64e-159100.00hypothetical protein Csa_022587 [Cucumis sativus][more]
XP_008459198.12.82e-8586.84PREDICTED: uncharacterized protein LOC103498390 [Cucumis melo][more]
KAA0042977.13.17e-8487.25anaphase-promoting complex subunit 13 isoform X2 [Cucumis melo var. makuwa][more]
TYK11109.17.41e-8386.58anaphase-promoting complex subunit 13 isoform X2 [Cucumis melo var. makuwa][more]
XP_004148091.13.60e-36100.00anaphase-promoting complex subunit 13 [Cucumis sativus][more]
BLAST of Cucsat.G19034 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNL02.73e-159100.00Anaphase-promoting complex subunit 13 OS=Cucumis sativus OX=3659 GN=Csa_2G437080... [more]
A0A1S3CA591.37e-8586.84Anaphase-promoting complex subunit 13 OS=Cucumis melo OX=3656 GN=LOC103498390 PE... [more]
A0A5A7TMF91.53e-8487.25Anaphase-promoting complex subunit 13 OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A5D3CLL33.59e-8386.58Anaphase-promoting complex subunit 13 OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A6J1JH612.27e-3495.24Anaphase-promoting complex subunit 13 OS=Cucurbita maxima OX=3661 GN=LOC11148432... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008401Apc13PANTHERPTHR28672ANAPHASE-PROMOTING COMPLEX SUBUNIT 13coord: 31..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G19034.T7Cucsat.G19034.T7mRNA
Cucsat.G19034.T1Cucsat.G19034.T1mRNA
Cucsat.G19034.T6Cucsat.G19034.T6mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007049 cell cycle
biological_process GO:0051301 cell division
biological_process GO:0070979 protein K11-linked ubiquitination
cellular_component GO:0005680 anaphase-promoting complex
molecular_function GO:0004386 helicase activity