Cucsat.G1880 (gene) Cucumber (B10) v3

Overview
NameCucsat.G1880
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptiontransmembrane protein 53
Locationctg1002: 3625688 .. 3628293 (-)
RNA-Seq ExpressionCucsat.G1880
SyntenyCucsat.G1880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATTTGGGACTCTATTGCTTATAAGTACAAAGTGTAGGATCAAAGGTGTAATTATCTTCCAAAAAGGACCAAAGGTGTAATTTAAATATAAATAAATAAACCCTTCAGCCTCCAACGCAGCTTTCCGGGAAAAAAAATCCTTCTCCGACTTCGGCCATAGTTCAGAAACTGGCTTTGGTTGTGGCCGGAAATTTTGGAGAAGCACTACCTAATCTTCTCAAAGTCGTCGCCGGAACTGCCACCATGGAGGCTCCAGTTAGAGCATTTCGCCCCTGCGTTCTTAATCGCGGTCTCTTCTCAAAAACAATTCCTCAATCTCGCCTCGTTTCATCTCCTGAATCCTATCGGAGCGCGATTTTCCGGCAATCTTCAACCTATTTCCACTTTTCTCCTTCTCGCAAAAACCTCGGTTCCAAAATTTCACTCTCACTTAATCTTTCTCACTGCTGCTCCTCTTCCTTTGGATCTTCCGCATCTTCTCTTGGCTCCATCCCTTCTAATTTTCTTTATTCTTTACCCTCATTACAGTCTTTCGGCTCTCAATTTGCGTCTGATTACTTCAGTTCATTTCTATTCGACTCAAACGGAAGTGACTGGACTTGGAATCGAGCTTCAGAGAGTGCAATTGGAAACAACGTAGGAGTTTTGCGGGGCGAAAAGGGGGCGGCGACCGTTGTTTTGTTAGGTTGGCTTGGGGCAAAGACTAAGCATCTGAGGAGGTATGTGGAGTGGTACAATGCGAGGGGTATCAACGCATTGACGTTTATTGTAGATCCGAGAGAGTTTCTTTGGTTCGCTTTGAGTCGGAAAGTTGAGCAGCGGATCTCGGATTTGGCGGTTGAACTCATTTCTTGGTTATCGGAAGGGGAAGAGAGTGATAAAGATCGATCCCTGATTTTTCATACTTTTAGCAACACGGGCTGGTTTGTGTATGTTGAATTTTGTTATCGGTATCTTATTTCAGTTGTTCTTTGTGATTTTAACACAGAATTAGCTTTGTTTCATTTTCTTGTTTCCTGCAGATATGGAGCCATTCTTGAAATCTTGCAAGGGCGGAAAGATTTGTTGGAGAAGATTAAAGGGTGCATCGTTGATTCTGGAGGAGGTGATCCGTTGAATCCGCAGGTTTGTGAAATTATAGTTGTAGAAGAATCTTGGAACCGTGCTTCAACAATGATATGAAAATCAGTTCTAAACTATTATCTGCTTTCTTTTAACTGTTGGAAAAACATCTGCAAGTTAACGAACTCCTATTCATCTTTGAAGTTTGCATCGTAATGTAGGATTTAGAGGTGGAAGTCTAGTAGGAACTGGCTATTGCCCTTCAAATATCATTTGATCTCAACCTCAATCTTCCTTTTGGTGTATCTCCTTATCTCTCTGTTCCTTCTTTCCTAGTTCTAAAGGCCTGTTGGTAATGATTGAATCTGGAAGTGTTCTTGATTATATGATCATTTACCCAAGATTTCATGAAAATTTCCAACTCCCATTTTTTACTTGGGCTTCTAAATAGTTTCAAAATCAGAAATTTTGGTTTTAACTTTTTTTTTTTTTTTTTTTGTCATGAACTATTGAACCATATGCAAACAGTTAGAACTAGTTAGGTTGTTTAAGCATTGAGACAATAATATAATAATAGCTAGCAGACACTTATCCATTCTGAATTAGATGGTGTGTTTCATCCAATATATTTTACTTTCCATTTTATTCTCATTCATAATAGAAGAGATATGATTCCATCTCTACTACAAACAATGGCAGGTTTGGGCAGCTGGATTTTCTGCAGCCATTCTCAAGAAAAATAGTTCTTCTGCATCTCCAATGGTAAATGGAGAGGAAATAGACAAGAAACCTCTTTTGTTGGAAACAATTTTCCTATCATCATTGGAGAAGTTCTTCTCTGTTGCTTTGAAGTTGCCAGATGTTGATAAGTAAGCTTTCTAATTCTGATTATATCCAGACATGGATACATATTCGCTTGAGGATCGAATGATTGAATGGGCATGCACATGTCATATGGTTGCATTTTTTTATATCTGTGAGTGCTTCGGTCAGCTTATACACACCTCGAATAATGTCACTTTCTTCTATCTTGTAATAGTTGCATATTGATTATTGAGAAATTAACATTTCCTTGCAGGAGATTGAACAACATTGTTTCAGTTCTTACAGAGAACCAACCTCCATATCCTGAGCTTTATCTGTACAGTTCAGGAGATAAAGTTGTACCTTACACGTCAATCGAGCTACTGATCAAGAAGAGGATGATGACAGGAAGGAAGGTTTTTTCGTACAACTTCGGCACGTCACCACATGTTGACCATTACAGGACGTACCCTGATATATACTCATTACAGCTTCACAAGTTCTTGATAGAATCTTTTTCTTCATAGGCTGTTGAAGATATGGATTTAGAAGGAAGTGAGATAATTTCATTAGAGCAATAACTGGATTGGCTAAAAAGTTTCATATGCAGAGATAGAGATATAGATTTCAGACACAGTTGAGAGACAATTGAAATAGGGTGAAGAGAAACCAAAACTCCAAATGTATCATTTTAATACCAATGACAAGAAAAACAAAGTCATTCTTACACCAATGGTACACTTTTCATACTCGTTCATGGTTTAGTATTTTATTTTTCCTCATTTCAAAACGGTATGCCTTGCATTAGATAAAGTGCTCTCACTTTTTTAAATCTTGGGAATAGTAATCAATTGTGTGGCAATATTTTTAAATTTTTGCAAATATAGCCAATGATAGGCTTTGTTGTAGTGTGTGAAAAC

Coding sequence (CDS)

ATGGAGGCTCCAGTTAGAGCATTTCGCCCCTGCGTTCTTAATCGCGGTCTCTTCTCAAAAACAATTCCTCAATCTCGCCTCGTTTCATCTCCTGAATCCTATCGGAGCGCGATTTTCCGGCAATCTTCAACCTATTTCCACTTTTCTCCTTCTCGCAAAAACCTCGGTTCCAAAATTTCACTCTCACTTAATCTTTCTCACTGCTGCTCCTCTTCCTTTGGATCTTCCGCATCTTCTCTTGGCTCCATCCCTTCTAATTTTCTTTATTCTTTACCCTCATTACAGTCTTTCGGCTCTCAATTTGCGTCTGATTACTTCAGTTCATTTCTATTCGACTCAAACGGAAGTGACTGGACTTGGAATCGAGCTTCAGAGAGTGCAATTGGAAACAACGTAGGAGTTTTGCGGGGCGAAAAGGGGGCGGCGACCGTTGTTTTGTTAGGTTGGCTTGGGGCAAAGACTAAGCATCTGAGGAGGTATGTGGAGTGGTACAATGCGAGGGGTATCAACGCATTGACGTTTATTGTAGATCCGAGAGAGTTTCTTTGGTTCGCTTTGAGTCGGAAAGTTGAGCAGCGGATCTCGGATTTGGCGGTTGAACTCATTTCTTGGTTATCGGAAGGGGAAGAGAGTGATAAAGATCGATCCCTGATTTTTCATACTTTTAGCAACACGGGCTGGTTTGTATATGGAGCCATTCTTGAAATCTTGCAAGGGCGGAAAGATTTGTTGGAGAAGATTAAAGGGTGCATCGTTGATTCTGGAGGAGGTGATCCGTTGAATCCGCAGGTTTGGGCAGCTGGATTTTCTGCAGCCATTCTCAAGAAAAATAGTTCTTCTGCATCTCCAATGGTAAATGGAGAGGAAATAGACAAGAAACCTCTTTTGTTGGAAACAATTTTCCTATCATCATTGGAGAAGTTCTTCTCTGTTGCTTTGAAGTTGCCAGATGTTGATAAGAGATTGAACAACATTGTTTCAGTTCTTACAGAGAACCAACCTCCATATCCTGAGCTTTATCTGTACAGTTCAGGAGATAAAGTTGTACCTTACACGTCAATCGAGCTACTGATCAAGAAGAGGATGATGACAGGAAGGAAGGTTTTTTCGTACAACTTCGGCACGTCACCACATGTTGACCATTACAGGACGTACCCTGATATATACTCATTACAGCTTCACAAGTTCTTGATAGAATCTTTTTCTTCATAG

Protein sequence

MEAPVRAFRPCVLNRGLFSKTIPQSRLVSSPESYRSAIFRQSSTYFHFSPSRKNLGSKISLSLNLSHCCSSSFGSSASSLGSIPSNFLYSLPSLQSFGSQFASDYFSSFLFDSNGSDWTWNRASESAIGNNVGVLRGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPREFLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFVYGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGFSAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDKRLNNIVSVLTENQPPYPELYLYSSGDKVVPYTSIELLIKKRMMTGRKVFSYNFGTSPHVDHYRTYPDIYSLQLHKFLIESFSS
Homology
BLAST of Cucsat.G1880 vs. ExPASy Swiss-Prot
Match: Q6DHN0 (Transmembrane protein 53 OS=Danio rerio OX=7955 GN=tmem53 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.8e-04
Identity = 39/146 (26.71%), Postives = 71/146 (48.63%), Query Frame = 0

Query: 136 RGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPREFLWFALSRKVEQRIS 195
           RG K    V+LLGW G++ KHL +Y   YN +G   L +   P + ++ + S   ++ + 
Sbjct: 23  RGSK-EPVVILLGWAGSRDKHLAKYSSIYNEQGCTTLRYTA-PLKTVFISESLGYKE-LR 82

Query: 196 DLAVELISWLSEGEESDKDRSLIFHTFSNTGWFVYVEFCYRYLISVVLCDFNTELALFH- 255
             A +L+  L + E   ++  + FH FSN G+ +     YRY++         EL   H 
Sbjct: 83  STAHKLLELLYDYEV--ENNPIFFHVFSNGGFML-----YRYMV---------ELLHSHK 142

Query: 256 -FLVSCRYGAILEILQGRKDLLEKIK 280
            F   C  G +++   G ++++  ++
Sbjct: 143 QFSTLCVVGTVVDSAPGSQNVVGALR 149

BLAST of Cucsat.G1880 vs. NCBI nr
Match: KGN49264.2 (hypothetical protein Csa_003529 [Cucumis sativus])

HSP 1 Score: 612 bits (1578), Expect = 6.68e-220
Identity = 320/351 (91.17%), Postives = 320/351 (91.17%), Query Frame = 0

Query: 1   MEAPVRAFRPCVLNRGLFSKTIPQSRLVSSPESYRSAIFRQSSTYFHFSPSRKNLGSKIS 60
           MEAPVRAFRPCVLNRGLFSKTIPQSRLVSSPESYRSAIFRQSSTYFHFSPSRKNLGSKIS
Sbjct: 1   MEAPVRAFRPCVLNRGLFSKTIPQSRLVSSPESYRSAIFRQSSTYFHFSPSRKNLGSKIS 60

Query: 61  LSLNLSHCCSSSFGSSASSLGSIPSNFLYSLPSLQSFGSQFASDYFSSFLFDSNGSDWTW 120
           LSLNLSHCCSSSFGSSASSLGSIPSNFLYSLPSLQSFGSQFASDYFSSFLFDSNGSDWTW
Sbjct: 61  LSLNLSHCCSSSFGSSASSLGSIPSNFLYSLPSLQSFGSQFASDYFSSFLFDSNGSDWTW 120

Query: 121 NRASESAIGNNVGVLRGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE 180
           NRASESAIGNNVGVLRGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE
Sbjct: 121 NRASESAIGNNVGVLRGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE 180

Query: 181 FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFVYVEFCYRYLIS 240
           FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFV           
Sbjct: 181 FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFV----------- 240

Query: 241 VVLCDFNTELALFHFLVSCRYGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF 300
                               YGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF
Sbjct: 241 --------------------YGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF 300

Query: 301 SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK 351
           SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK
Sbjct: 301 SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK 320

BLAST of Cucsat.G1880 vs. NCBI nr
Match: XP_011658015.1 (transmembrane protein 53 [Cucumis sativus])

HSP 1 Score: 612 bits (1578), Expect = 1.44e-218
Identity = 320/351 (91.17%), Postives = 320/351 (91.17%), Query Frame = 0

Query: 1   MEAPVRAFRPCVLNRGLFSKTIPQSRLVSSPESYRSAIFRQSSTYFHFSPSRKNLGSKIS 60
           MEAPVRAFRPCVLNRGLFSKTIPQSRLVSSPESYRSAIFRQSSTYFHFSPSRKNLGSKIS
Sbjct: 1   MEAPVRAFRPCVLNRGLFSKTIPQSRLVSSPESYRSAIFRQSSTYFHFSPSRKNLGSKIS 60

Query: 61  LSLNLSHCCSSSFGSSASSLGSIPSNFLYSLPSLQSFGSQFASDYFSSFLFDSNGSDWTW 120
           LSLNLSHCCSSSFGSSASSLGSIPSNFLYSLPSLQSFGSQFASDYFSSFLFDSNGSDWTW
Sbjct: 61  LSLNLSHCCSSSFGSSASSLGSIPSNFLYSLPSLQSFGSQFASDYFSSFLFDSNGSDWTW 120

Query: 121 NRASESAIGNNVGVLRGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE 180
           NRASESAIGNNVGVLRGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE
Sbjct: 121 NRASESAIGNNVGVLRGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE 180

Query: 181 FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFVYVEFCYRYLIS 240
           FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFV           
Sbjct: 181 FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFV----------- 240

Query: 241 VVLCDFNTELALFHFLVSCRYGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF 300
                               YGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF
Sbjct: 241 --------------------YGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF 300

Query: 301 SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK 351
           SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK
Sbjct: 301 SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK 320

BLAST of Cucsat.G1880 vs. NCBI nr
Match: TYK12615.1 (transmembrane protein 53 [Cucumis melo var. makuwa])

HSP 1 Score: 581 bits (1498), Expect = 2.17e-206
Identity = 306/351 (87.18%), Postives = 310/351 (88.32%), Query Frame = 0

Query: 1   MEAPVRAFRPCVLNRGLFSKTIPQSRLVSSPESYRSAIFRQSSTYFHFSPSRKNLGSKIS 60
           MEAPVRAFRPCVLNRG FSKTIPQSRLVS PES RSAIFRQSSTYFHFSPSRK  GSKIS
Sbjct: 1   MEAPVRAFRPCVLNRGFFSKTIPQSRLVSFPESNRSAIFRQSSTYFHFSPSRKYFGSKIS 60

Query: 61  LSLNLSHCCSSSFGSSASSLGSIPSNFLYSLPSLQSFGSQFASDYFSSFLFDSNGSDWTW 120
           LSLNLSHC SSSFGSSASSLGSIPSNFL SLPSLQSFGSQ ASDY SSFL +SNGSDWTW
Sbjct: 61  LSLNLSHCSSSSFGSSASSLGSIPSNFLSSLPSLQSFGSQLASDYLSSFLSESNGSDWTW 120

Query: 121 NRASESAIGNNVGVLRGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE 180
           NRASESAIGNNVG+L+GEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE
Sbjct: 121 NRASESAIGNNVGILQGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE 180

Query: 181 FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFVYVEFCYRYLIS 240
           FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWF+           
Sbjct: 181 FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFI----------- 240

Query: 241 VVLCDFNTELALFHFLVSCRYGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF 300
                               YGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF
Sbjct: 241 --------------------YGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF 300

Query: 301 SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK 351
           SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK
Sbjct: 301 SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK 320

BLAST of Cucsat.G1880 vs. NCBI nr
Match: XP_008440723.1 (PREDICTED: transmembrane protein 53 [Cucumis melo] >KAA0036219.1 transmembrane protein 53 [Cucumis melo var. makuwa])

HSP 1 Score: 581 bits (1498), Expect = 2.17e-206
Identity = 306/351 (87.18%), Postives = 310/351 (88.32%), Query Frame = 0

Query: 1   MEAPVRAFRPCVLNRGLFSKTIPQSRLVSSPESYRSAIFRQSSTYFHFSPSRKNLGSKIS 60
           MEAPVRAFRPCVLNRG FSKTIPQSRLVS PES RSAIFRQSSTYFHFSPSRK  GSKIS
Sbjct: 1   MEAPVRAFRPCVLNRGFFSKTIPQSRLVSFPESNRSAIFRQSSTYFHFSPSRKYFGSKIS 60

Query: 61  LSLNLSHCCSSSFGSSASSLGSIPSNFLYSLPSLQSFGSQFASDYFSSFLFDSNGSDWTW 120
           LSLNLSHC SSSFGSSASSLGSIPSNFL SLPSLQSFGSQ ASDY SSFL +SNGSDWTW
Sbjct: 61  LSLNLSHCSSSSFGSSASSLGSIPSNFLSSLPSLQSFGSQLASDYLSSFLSESNGSDWTW 120

Query: 121 NRASESAIGNNVGVLRGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE 180
           NRASESAIGNNVG+L+GEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE
Sbjct: 121 NRASESAIGNNVGILQGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE 180

Query: 181 FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFVYVEFCYRYLIS 240
           FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWF+           
Sbjct: 181 FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFI----------- 240

Query: 241 VVLCDFNTELALFHFLVSCRYGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF 300
                               YGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF
Sbjct: 241 --------------------YGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF 300

Query: 301 SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK 351
           SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK
Sbjct: 301 SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK 320

BLAST of Cucsat.G1880 vs. NCBI nr
Match: XP_038883889.1 (transmembrane protein 53 [Benincasa hispida])

HSP 1 Score: 548 bits (1411), Expect = 3.78e-193
Identity = 290/351 (82.62%), Postives = 299/351 (85.19%), Query Frame = 0

Query: 1   MEAPVRAFRPCVLNRGLFSKTIPQSRLVSSPESYRSAIFRQSSTYFHFSPSRKNLGSKIS 60
           MEAPVRAFRPCVLNR LFSKTIP SRLVSSPES RSAIFRQSSTYFH SPSRK LGSKIS
Sbjct: 1   MEAPVRAFRPCVLNRRLFSKTIPSSRLVSSPESDRSAIFRQSSTYFHLSPSRKYLGSKIS 60

Query: 61  LSLNLSHCCSSSFGSSASSLGSIPSNFLYSLPSLQSFGSQFASDYFSSFLFDSNGSDWTW 120
           LSLNLSHC SSSFGSSASSLGS PSNFL SLPSLQSFGSQFASDY +S L DSNGS WTW
Sbjct: 61  LSLNLSHCSSSSFGSSASSLGSSPSNFLSSLPSLQSFGSQFASDYSNSVLSDSNGSAWTW 120

Query: 121 NRASESAIGNNVGVLRGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE 180
           NRASESAIGN++GVL  EKG  TVVLLGWLG+KTKHLRRYVEWYNARGINALTF+VDPRE
Sbjct: 121 NRASESAIGNDLGVLGAEKGTVTVVLLGWLGSKTKHLRRYVEWYNARGINALTFVVDPRE 180

Query: 181 FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFVYVEFCYRYLIS 240
           FLWFALSRKVEQRISDLAVELISWLS+GEESD DR LIFH FSNTGWFV           
Sbjct: 181 FLWFALSRKVEQRISDLAVELISWLSDGEESDNDRCLIFHAFSNTGWFV----------- 240

Query: 241 VVLCDFNTELALFHFLVSCRYGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF 300
                               YGAILEILQGRKDLL+KIKGCI DSGGGDPLNPQVWAAGF
Sbjct: 241 --------------------YGAILEILQGRKDLLKKIKGCIFDSGGGDPLNPQVWAAGF 300

Query: 301 SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK 351
           SAAILKKNSSSASPMVNGEE+DK+PLLLETI LSSLEKFFSVALKLPDVDK
Sbjct: 301 SAAILKKNSSSASPMVNGEEVDKRPLLLETIVLSSLEKFFSVALKLPDVDK 320

BLAST of Cucsat.G1880 vs. ExPASy TrEMBL
Match: A0A0A0KGH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502770 PE=3 SV=1)

HSP 1 Score: 612 bits (1578), Expect = 6.95e-219
Identity = 320/351 (91.17%), Postives = 320/351 (91.17%), Query Frame = 0

Query: 1   MEAPVRAFRPCVLNRGLFSKTIPQSRLVSSPESYRSAIFRQSSTYFHFSPSRKNLGSKIS 60
           MEAPVRAFRPCVLNRGLFSKTIPQSRLVSSPESYRSAIFRQSSTYFHFSPSRKNLGSKIS
Sbjct: 1   MEAPVRAFRPCVLNRGLFSKTIPQSRLVSSPESYRSAIFRQSSTYFHFSPSRKNLGSKIS 60

Query: 61  LSLNLSHCCSSSFGSSASSLGSIPSNFLYSLPSLQSFGSQFASDYFSSFLFDSNGSDWTW 120
           LSLNLSHCCSSSFGSSASSLGSIPSNFLYSLPSLQSFGSQFASDYFSSFLFDSNGSDWTW
Sbjct: 61  LSLNLSHCCSSSFGSSASSLGSIPSNFLYSLPSLQSFGSQFASDYFSSFLFDSNGSDWTW 120

Query: 121 NRASESAIGNNVGVLRGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE 180
           NRASESAIGNNVGVLRGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE
Sbjct: 121 NRASESAIGNNVGVLRGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE 180

Query: 181 FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFVYVEFCYRYLIS 240
           FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFV           
Sbjct: 181 FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFV----------- 240

Query: 241 VVLCDFNTELALFHFLVSCRYGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF 300
                               YGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF
Sbjct: 241 --------------------YGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF 300

Query: 301 SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK 351
           SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK
Sbjct: 301 SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK 320

BLAST of Cucsat.G1880 vs. ExPASy TrEMBL
Match: A0A5A7T4A9 (Transmembrane protein 53 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18G00160 PE=3 SV=1)

HSP 1 Score: 581 bits (1498), Expect = 1.05e-206
Identity = 306/351 (87.18%), Postives = 310/351 (88.32%), Query Frame = 0

Query: 1   MEAPVRAFRPCVLNRGLFSKTIPQSRLVSSPESYRSAIFRQSSTYFHFSPSRKNLGSKIS 60
           MEAPVRAFRPCVLNRG FSKTIPQSRLVS PES RSAIFRQSSTYFHFSPSRK  GSKIS
Sbjct: 1   MEAPVRAFRPCVLNRGFFSKTIPQSRLVSFPESNRSAIFRQSSTYFHFSPSRKYFGSKIS 60

Query: 61  LSLNLSHCCSSSFGSSASSLGSIPSNFLYSLPSLQSFGSQFASDYFSSFLFDSNGSDWTW 120
           LSLNLSHC SSSFGSSASSLGSIPSNFL SLPSLQSFGSQ ASDY SSFL +SNGSDWTW
Sbjct: 61  LSLNLSHCSSSSFGSSASSLGSIPSNFLSSLPSLQSFGSQLASDYLSSFLSESNGSDWTW 120

Query: 121 NRASESAIGNNVGVLRGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE 180
           NRASESAIGNNVG+L+GEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE
Sbjct: 121 NRASESAIGNNVGILQGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE 180

Query: 181 FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFVYVEFCYRYLIS 240
           FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWF+           
Sbjct: 181 FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFI----------- 240

Query: 241 VVLCDFNTELALFHFLVSCRYGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF 300
                               YGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF
Sbjct: 241 --------------------YGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF 300

Query: 301 SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK 351
           SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK
Sbjct: 301 SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK 320

BLAST of Cucsat.G1880 vs. ExPASy TrEMBL
Match: A0A5D3CM53 (Transmembrane protein 53 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002010 PE=3 SV=1)

HSP 1 Score: 581 bits (1498), Expect = 1.05e-206
Identity = 306/351 (87.18%), Postives = 310/351 (88.32%), Query Frame = 0

Query: 1   MEAPVRAFRPCVLNRGLFSKTIPQSRLVSSPESYRSAIFRQSSTYFHFSPSRKNLGSKIS 60
           MEAPVRAFRPCVLNRG FSKTIPQSRLVS PES RSAIFRQSSTYFHFSPSRK  GSKIS
Sbjct: 1   MEAPVRAFRPCVLNRGFFSKTIPQSRLVSFPESNRSAIFRQSSTYFHFSPSRKYFGSKIS 60

Query: 61  LSLNLSHCCSSSFGSSASSLGSIPSNFLYSLPSLQSFGSQFASDYFSSFLFDSNGSDWTW 120
           LSLNLSHC SSSFGSSASSLGSIPSNFL SLPSLQSFGSQ ASDY SSFL +SNGSDWTW
Sbjct: 61  LSLNLSHCSSSSFGSSASSLGSIPSNFLSSLPSLQSFGSQLASDYLSSFLSESNGSDWTW 120

Query: 121 NRASESAIGNNVGVLRGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE 180
           NRASESAIGNNVG+L+GEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE
Sbjct: 121 NRASESAIGNNVGILQGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE 180

Query: 181 FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFVYVEFCYRYLIS 240
           FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWF+           
Sbjct: 181 FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFI----------- 240

Query: 241 VVLCDFNTELALFHFLVSCRYGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF 300
                               YGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF
Sbjct: 241 --------------------YGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF 300

Query: 301 SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK 351
           SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK
Sbjct: 301 SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK 320

BLAST of Cucsat.G1880 vs. ExPASy TrEMBL
Match: A0A1S3B1C0 (transmembrane protein 53 OS=Cucumis melo OX=3656 GN=LOC103485055 PE=3 SV=1)

HSP 1 Score: 581 bits (1498), Expect = 1.05e-206
Identity = 306/351 (87.18%), Postives = 310/351 (88.32%), Query Frame = 0

Query: 1   MEAPVRAFRPCVLNRGLFSKTIPQSRLVSSPESYRSAIFRQSSTYFHFSPSRKNLGSKIS 60
           MEAPVRAFRPCVLNRG FSKTIPQSRLVS PES RSAIFRQSSTYFHFSPSRK  GSKIS
Sbjct: 1   MEAPVRAFRPCVLNRGFFSKTIPQSRLVSFPESNRSAIFRQSSTYFHFSPSRKYFGSKIS 60

Query: 61  LSLNLSHCCSSSFGSSASSLGSIPSNFLYSLPSLQSFGSQFASDYFSSFLFDSNGSDWTW 120
           LSLNLSHC SSSFGSSASSLGSIPSNFL SLPSLQSFGSQ ASDY SSFL +SNGSDWTW
Sbjct: 61  LSLNLSHCSSSSFGSSASSLGSIPSNFLSSLPSLQSFGSQLASDYLSSFLSESNGSDWTW 120

Query: 121 NRASESAIGNNVGVLRGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE 180
           NRASESAIGNNVG+L+GEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE
Sbjct: 121 NRASESAIGNNVGILQGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE 180

Query: 181 FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFVYVEFCYRYLIS 240
           FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWF+           
Sbjct: 181 FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFI----------- 240

Query: 241 VVLCDFNTELALFHFLVSCRYGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF 300
                               YGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF
Sbjct: 241 --------------------YGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF 300

Query: 301 SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK 351
           SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK
Sbjct: 301 SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK 320

BLAST of Cucsat.G1880 vs. ExPASy TrEMBL
Match: A0A6J1GD00 (transmembrane protein 53 OS=Cucurbita moschata OX=3662 GN=LOC111453067 PE=3 SV=1)

HSP 1 Score: 519 bits (1336), Expect = 4.52e-182
Identity = 275/351 (78.35%), Postives = 290/351 (82.62%), Query Frame = 0

Query: 1   MEAPVRAFRPCVLNRGLFSKTIPQSRLVSSPESYRSAIFRQSSTYFHFSPSRKNLGSKIS 60
           MEAPVRAFRPCVLNR LF+KTIPQSRLVS PES R+AI RQSSTYFHF P RK LG K S
Sbjct: 1   MEAPVRAFRPCVLNRHLFTKTIPQSRLVSFPESNRTAILRQSSTYFHFPP-RKCLGLKFS 60

Query: 61  LSLNLSHCCSSSFGSSASSLGSIPSNFLYSLPSLQSFGSQFASDYFSSFLFDSNGSDWTW 120
           LSLNLSHC SSSFGS+ASS+GS   NFL SLPSLQS GSQFA DY +SFL DSNGS WTW
Sbjct: 61  LSLNLSHCSSSSFGSTASSIGSSAFNFLSSLPSLQSLGSQFAPDYSNSFLSDSNGSAWTW 120

Query: 121 NRASESAIGNNVGVLRGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPRE 180
           NRAS+SAIGNNVG L GEKG ATVVLLGWLGAKTKHLRRYVEWYNARGINALTF++DPRE
Sbjct: 121 NRASDSAIGNNVGALGGEKGEATVVLLGWLGAKTKHLRRYVEWYNARGINALTFVLDPRE 180

Query: 181 FLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFVYVEFCYRYLIS 240
           FLWFALSRKVEQRISDLA ELISWLS+GEE+ KDR LIFHTFSNTGWFV           
Sbjct: 181 FLWFALSRKVEQRISDLATELISWLSDGEENHKDRRLIFHTFSNTGWFV----------- 240

Query: 241 VVLCDFNTELALFHFLVSCRYGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGF 300
                               YGAILEILQGR+DLLEKIKGCIVDSGGGDPLNPQ+WAAGF
Sbjct: 241 --------------------YGAILEILQGREDLLEKIKGCIVDSGGGDPLNPQIWAAGF 300

Query: 301 SAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK 351
           SAAILKKNSSS SPMV+G+EIDKKPL+LET  LSSLE FFSVALK PDVDK
Sbjct: 301 SAAILKKNSSSTSPMVSGKEIDKKPLVLETFVLSSLENFFSVALKFPDVDK 319

BLAST of Cucsat.G1880 vs. TAIR 10
Match: AT2G18245.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 209.1 bits (531), Expect = 5.6e-54
Identity = 127/295 (43.05%), Postives = 173/295 (58.64%), Query Frame = 0

Query: 71  SSFGSSASSLGSIPSN-----FLYSLPSLQSFGSQFASDYFSSFLFDSNGSDWTWNRASE 130
           SS  ++     S+P+N      L+ L S  +F  +  + + + F  + N     WNRA  
Sbjct: 47  SSISAARIRCSSLPANANLFRSLFFLTS--TFRLENTAVHANPFRSEPNDGVAVWNRAPR 106

Query: 131 SAI-GNNVGVLRGEKG-AATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPREFLW 190
               G N  +  G +G   TVVLLGWLGAK KHLRRYVEWYN+RGINA+TF VD R+ L 
Sbjct: 107 IVNGGGNAAIFGGNEGKETTVVLLGWLGAKAKHLRRYVEWYNSRGINAVTFTVDVRDLLR 166

Query: 191 FALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFVYVEFCYRYLISVVL 250
             L R++E+RI++   EL++W+SE E+  +++ L+FH+FSNTGW V              
Sbjct: 167 LDLGRRLERRIAEFGNELVNWVSEKEDDGREKCLVFHSFSNTGWLV-------------- 226

Query: 251 CDFNTELALFHFLVSCRYGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGFSAA 310
                            YGA+LE   GR+DL+E+IKGCI+DSGG DPL+ ++WAAGF+AA
Sbjct: 227 -----------------YGALLESFIGRQDLVERIKGCIIDSGGADPLDTKIWAAGFTAA 286

Query: 311 ILKKNSSSASPMVNG--EEID------KKPLLLETIFLSSLEKFFSVALKLPDVD 351
           ILKK SS+ +   N   +E D      K+PL +E I LSSLEK F + L  PDV+
Sbjct: 287 ILKKRSSTITTEPNSPIKEEDASTPQKKEPLGIENIMLSSLEKLFPIFLNHPDVN 308

BLAST of Cucsat.G1880 vs. TAIR 10
Match: AT3G19970.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 141.0 bits (354), Expect = 1.9e-33
Identity = 100/291 (34.36%), Postives = 142/291 (48.80%), Query Frame = 0

Query: 70  SSSFGSSASSLGSIPSNFLYSLPSLQSFGSQFASDYFSSFLFDSNGSDWTWNRASESAIG 129
           S S  +S +SL ++ S  +Y    L       A    +S +       + W+    SA+ 
Sbjct: 94  SCSLATSVTSLSALRS--VYQSAELAKASKPVAFTIGASLVVPD--ISYRWHLPEPSAVD 153

Query: 130 -NNVGVLRGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPREFLWFALSR 189
            +       EK    VVLLGWLG+K KHL++Y +WY ++G + +TF +   E + + +  
Sbjct: 154 MSGSSSCVSEKNRTVVVLLGWLGSKQKHLKKYADWYTSKGYHVITFTLPMNEIMSYQVGG 213

Query: 190 KVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFVYVEFCYRYLISVVLCDFNT 249
           K E+ I  L   L  WL E    ++ ++L+FHTFSNTGW                     
Sbjct: 214 KAEKNIESLVNHLADWLDE----EQKKNLVFHTFSNTGWLT------------------- 273

Query: 250 ELALFHFLVSCRYGAILEILQGR-KDLLEKIKGCIVDSGGGDPLNPQVWAAGFSAAILKK 309
                       YGAILE  Q +   L+ ++KGCIVDS      +P VWA+GFSAA LKK
Sbjct: 274 ------------YGAILEKFQKQDSSLMGRVKGCIVDSAPVAAADPTVWASGFSAAFLKK 333

Query: 310 N------SSSASPMVNGEEIDK-KPLLLETIFLSSLEKFFSVALKLPDVDK 352
           +      S+S+S   NG  I + KP   ET  L  LEKFF+V L LP V++
Sbjct: 334 SSVATKGSASSSYESNGINISQPKPAATETALLLVLEKFFAVILNLPKVNR 345

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q6DHN01.8e-0426.71Transmembrane protein 53 OS=Danio rerio OX=7955 GN=tmem53 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
KGN49264.26.68e-22091.17hypothetical protein Csa_003529 [Cucumis sativus][more]
XP_011658015.11.44e-21891.17transmembrane protein 53 [Cucumis sativus][more]
TYK12615.12.17e-20687.18transmembrane protein 53 [Cucumis melo var. makuwa][more]
XP_008440723.12.17e-20687.18PREDICTED: transmembrane protein 53 [Cucumis melo] >KAA0036219.1 transmembrane p... [more]
XP_038883889.13.78e-19382.62transmembrane protein 53 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A0A0KGH86.95e-21991.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502770 PE=3 SV=1[more]
A0A5A7T4A91.05e-20687.18Transmembrane protein 53 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... [more]
A0A5D3CM531.05e-20687.18Transmembrane protein 53 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A1S3B1C01.05e-20687.18transmembrane protein 53 OS=Cucumis melo OX=3656 GN=LOC103485055 PE=3 SV=1[more]
A0A6J1GD004.52e-18278.35transmembrane protein 53 OS=Cucurbita moschata OX=3662 GN=LOC111453067 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT2G18245.15.6e-5443.05alpha/beta-Hydrolases superfamily protein [more]
AT3G19970.11.9e-3334.36alpha/beta-Hydrolases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008547Protein of unknown function DUF829, TMEM53PFAMPF05705DUF829coord: 143..226
e-value: 5.3E-19
score: 69.1
IPR008547Protein of unknown function DUF829, TMEM53PANTHERPTHR12265UNCHARACTERIZEDcoord: 39..226
NoneNo IPR availablePANTHERPTHR12265:SF11ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEINcoord: 39..226

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G1880.T2Cucsat.G1880.T2mRNA
Cucsat.G1880.T4Cucsat.G1880.T4mRNA
Cucsat.G1880.T6Cucsat.G1880.T6mRNA
Cucsat.G1880.T7Cucsat.G1880.T7mRNA
Cucsat.G1880.T1Cucsat.G1880.T1mRNA
Cucsat.G1880.T3Cucsat.G1880.T3mRNA
Cucsat.G1880.T9Cucsat.G1880.T9mRNA
Cucsat.G1880.T5Cucsat.G1880.T5mRNA
Cucsat.G1880.T8Cucsat.G1880.T8mRNA
Cucsat.G1880.T12Cucsat.G1880.T12mRNA
Cucsat.G1880.T11Cucsat.G1880.T11mRNA
Cucsat.G1880.T13Cucsat.G1880.T13mRNA
Cucsat.G1880.T10Cucsat.G1880.T10mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0097573 glutathione oxidoreductase activity