Cucsat.G1874 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G1874
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	GATA transcription factor 18
Location	ctg1002: 3584523 .. 3585825 (-)
RNA-Seq Expression	Cucsat.G1874
Synteny	Cucsat.G1874

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCTCCTTATAAATTACCTCCCACTTTCTCCCATTTCTTCATTATTTTCTACTCCCACTCCTCTGTTTTTTCTACCCAAATCCAAAACACAAACACACACACAAAAACAAACCCCTTTGTTCTGTATTTCACCACAAACAATGATGCAACGTTGTGGTAGCTACCAATGTTACTCTGCAGGAGAGTGTTCTTGTAATGGATTTTACGGGCAACAGGGCACTTACTTCTCTATGCCCTCCTACAATAATTACTACGAAACCGAACATTACTCTTTCGAATCTTCCTCTCCAGTTGATTGTACACTCTCTCTCGGAACGCCCTCTACTCGTATGACTGAGTACGACGAGAAACGCCGTGAAGAACAACACTCTGCTTCTAATTTTACTTGGGATTTACCTCGTACCAAACATCCTCATTCCTCCAAAACCACCCGCCGCAGCAGCGCTAATATTGGCAGTGATAAATCTAATGCCAATAATGGTGACCAAATGTTCGCTCGTCACTGTGCTAATTGTGACACTACCACTACCCCTCTCTGGCGTAACGGACCTAGCGGCCCTAAGGTAATTTAAATTTCTATCATTTTTTTCTTCAAATTTTGTTCTGTCCATGAATTAAAGCTGATGGGTTGTGATAAATTTAAATTGCAGTCGTTGTGCAATGCGTGTGGGATTAGATACAAGAAGGAAGAAAGAAAAGCAGCAAGTTCAGGGCAACAAGCGAGTTCATGGCTACAGCATCATTCTCATAGCCAAAAAGCACCGAGATTCTCACATGGTATTGCCAATGAACTCAATCCAAGCGTCGCTTTTCTAACATGGAGTCTCAATGATACAGAGCAACCTCAGCTTTATTATGATTTCACAAGTTGAAAATTATCATCCCACGAGAAAAAAGGAAAGAAAAAAAAAAGTTTTTTTTTTTTTTTTTGGCAATGGGAAGAGATGTGGGAGAGTTTTTTTTTTCTTTTTTTCTTTTAATTTGTTATTAATATTTACTTTTCTTTTTATACTGGGGAGAAAAGAAAAAAAGAAGAAGAAGAAGAGAAAAAGAGAAAGAAAGGAAGCATTATAATGTTGTTGAAGGATTTTTAAAAGATGGTGAGACGGTTTTATGGAAATACTGTCTCCTCTAAAGAATCCACCTTCATCAATTTTTCTTTCTTTCTTCTTTTTTTTTTTTTAAATTTTCTCTCTTTTTTTTTCTTTTACCCTTTCAGAATTTTTTGGCTGCTACTTATTTTTCCATTATACGTTAATGTTTGTGAAAATCGAAATATTAAAATTTTATATATATATTTGT

Coding sequence (CDS)

CCTCTCCTTATAAATTACCTCCCACTTTCTCCCATTTCTTCATTATTTTCTACTCCCACTCCTCTGTTTTTTCTACCCAAATCCAAAACACAAACACACACACAAAAACAAACCCCTTTGTTCTGTATTTCACCACAAACAATGATGCAACGTTGTGGTAGCTACCAATGTTACTCTGCAGGAGAGTGTTCTTGTAATGGATTTTACGGGCAACAGGGCACTTACTTCTCTATGCCCTCCTACAATAATTACTACGAAACCGAACATTACTCTTTCGAATCTTCCTCTCCAGTTGATTGTACACTCTCTCTCGGAACGCCCTCTACTCGTATGACTGAGTACGACGAGAAACGCCGTGAAGAACAACACTCTGCTTCTAATTTTACTTGGGATTTACCTCGTACCAAACATCCTCATTCCTCCAAAACCACCCGCCGCAGCAGCGCTAATATTGGCAGTGATAAATCTAATGCCAATAATGGTGACCAAATGTTCGCTCGTCACTGTGCTAATTGTGACACTACCACTACCCCTCTCTGGCGTAACGGACCTAGCGGCCCTAAGTCGTTGTGCAATGCGTGTGGGATTAGATACAAGAAGGAAGAAAGAAAAGCAGCAAGTTCAGGGCAACAAGCGAGTTCATGGCTACAGCATCATTCTCATAGCCAAAAAGCACCGAGATTCTCACATGGTATTGCCAATGAACTCAATCCAAGCGTCGCTTTTCTAACATGGAGTCTCAATGATACAGAGCAACCTCAGCTTTATTATGATTTCACAAGTTGA

Protein sequence

PLLINYLPLSPISSLFSTPTPLFFLPKSKTQTHTQKQTPLFCISPQTMMQRCGSYQCYSAGECSCNGFYGQQGTYFSMPSYNNYYETEHYSFESSSPVDCTLSLGTPSTRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANIGSDKSNANNGDQMFARHCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQASSWLQHHSHSQKAPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS

Homology

[Close]

BLAST of Cucsat.G1874 vs. ExPASy Swiss-Prot
Match: Q8LC79 (GATA transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=GATA18 PE=1 SV=2)

HSP 1 Score: 136.3 bits (342), Expect = 4.8e-31
Identity = 104/295 (35.25%), Postives = 133/295 (45.08%), Query Frame = 0


Query: 37  QTPLFCISPQTMMQRCGSYQCYSAGECSCNGFYGQQGTY---FSMPSYNNYYETEHYSFE 96
           QTP    +       CG +  +S   C  N      G+Y   FSM +   + +       
Sbjct: 3   QTPYTTSTQGQYCHSCGMFHHHSQSCCYNNNNNSNAGSYSMVFSMQNGGVFEQNGEDYHH 62

Query: 97  SSSPVDCTLSLGTPSTRMTEYDEKRREEQHSA-----SNFTWDLPRTKHPHSSKTT---- 156
           SSS VDCTLSLGTPSTR+ E DEKRR    S      SNF WDL  TK+ ++SKT     
Sbjct: 63  SSSLVDCTLSLGTPSTRLCEEDEKRRRSTSSGASSCISNF-WDLIHTKN-NNSKTAPYNN 122

Query: 157 ---------RRSSANIGSDKSNANNGDQMFARHCANCDTTTTPLWRNGPSGPKSLCNACG 216
                     R  +  G        GD + AR CANCDTT+TPLWRNGP GPKSLCNACG
Sbjct: 123 VPSFSANKPSRGCSGGGGGGGGGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACG 182

Query: 217 IRYKKEERKAA---------------------------------SSGQQASSWLQHHSHS 261
           IR+KKEER+                                   ++    + W  HHS +
Sbjct: 183 IRFKKEERRTTAATGNTVVGAAPVQTDQYGHHNSGYNNYHAATNNNNNNGTPWAHHHS-T 242

[Close]

BLAST of Cucsat.G1874 vs. ExPASy Swiss-Prot
Match: Q6QPM2 (GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2)

HSP 1 Score: 123.2 bits (308), Expect = 4.2e-27
Identity = 81/225 (36.00%), Postives = 108/225 (48.00%), Query Frame = 0


Query: 81  YNNYYETEHYSFESSSP---VDCTLSLGTPSTRMTEYDEKRREEQHSASNFTWDLPRTKH 140
           ++ ++  E+     SSP   VDCTLSLGTPSTR+   D++RR   H++    WD      
Sbjct: 3   FSMFFSPENDVSHHSSPYASVDCTLSLGTPSTRLCNEDDERRFSSHTSDTIGWDFLN--- 62

Query: 141 PHSSKTTRRSSANIGSDKSNANNGDQMFARHCANCDTTTTPLWRNGPSGPKSLCNACGIR 200
                         GS K     G  + AR CANCDTT+TPLWRNGP GPKSLCNACGIR
Sbjct: 63  --------------GSKKGGGGGGHNLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIR 122

Query: 201 YKKEERKAA------------------------------SSGQQASSWLQHHSH-SQKAP 260
           +KKEER+A+                              ++ Q ASS   HH H +Q+ P
Sbjct: 123 FKKEERRASTARNSTSGGGSTAAGVPTLDHQASANYYYNNNNQYASSSPWHHQHNTQRVP 182

[Close]

BLAST of Cucsat.G1874 vs. ExPASy Swiss-Prot
Match: Q9ZPX0 (GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2)

HSP 1 Score: 102.8 bits (255), Expect = 5.9e-21
Identity = 57/126 (45.24%), Postives = 77/126 (61.11%), Query Frame = 0


Query: 82  NNYYETEHYSFESSSPVDCTLSLGTPSTRMTEYDEKRREEQHSASNFTWDLPRTKHPHSS 141
           N++    + +F SS+ VDCTLSLGTPSTR+   D+  R    +++N + D     H  ++
Sbjct: 22  NHHNYDPYNNFSSSTSVDCTLSLGTPSTRL---DDHHRFSSANSNNISGDF--YIHGGNA 81

Query: 142 KTTRRSSANIGSDKSNANNGDQMFARHCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKE 201
           KT+      +               R CA+CDTT+TPLWRNGP GPKSLCNACGIR+KKE
Sbjct: 82  KTSSYKKGGVA----------HSLPRRCASCDTTSTPLWRNGPKGPKSLCNACGIRFKKE 132

Query: 202 ERKAAS 208
           ER+A +
Sbjct: 142 ERRATA 132

[Close]

BLAST of Cucsat.G1874 vs. ExPASy Swiss-Prot
Match: B8AX51 (GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 8.0e-18
Identity = 65/166 (39.16%), Postives = 81/166 (48.80%), Query Frame = 0


Query: 56  QCYSAGECSCNGFYGQQGTYFSMPSYNNYYETEHYSFESSSPVDCTLSLGTPSTRMTEYD 115
           QC+       +  Y    T  + PS          S  S+  VDCTLSLGTPS+R  E  
Sbjct: 40  QCWPPSTVEESAAYDDHSTVTTSPS--------SPSSSSTGSVDCTLSLGTPSSRRAEPV 99

Query: 116 EKRREEQH------------SASNFTWDLPRTKHPHSSKTTRRSSANIGSDKSNANNG-D 175
                  +            SA+  +WD        S    ++     G+ K  A  G D
Sbjct: 100 AAAAPAANHGAPVPAHYPSLSAATVSWDAT----AESYYCGQQGRPATGAAKCAAGAGHD 159

Query: 176 QMFARHCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASS 209
            +  R CANC T +TPLWRNGP GPKSLCNACGIRYKKEER+AA++
Sbjct: 160 ALLDRRCANCGTASTPLWRNGPRGPKSLCNACGIRYKKEERRAAAT 193

[Close]

BLAST of Cucsat.G1874 vs. ExPASy Swiss-Prot
Match: Q6L5E5 (GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 8.0e-18
Identity = 65/166 (39.16%), Postives = 81/166 (48.80%), Query Frame = 0


Query: 56  QCYSAGECSCNGFYGQQGTYFSMPSYNNYYETEHYSFESSSPVDCTLSLGTPSTRMTEYD 115
           QC+       +  Y    T  + PS          S  S+  VDCTLSLGTPS+R  E  
Sbjct: 40  QCWPPSTVEESAAYDDHSTVTTSPS--------SPSSSSTGSVDCTLSLGTPSSRRAEPV 99

Query: 116 EKRREEQH------------SASNFTWDLPRTKHPHSSKTTRRSSANIGSDKSNANNG-D 175
                  +            SA+  +WD        S    ++     G+ K  A  G D
Sbjct: 100 AAAAPAANHGAPVPAHYPSLSAATVSWDAT----AESYYCGQQGRPATGAAKCAAGAGHD 159

Query: 176 QMFARHCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASS 209
            +  R CANC T +TPLWRNGP GPKSLCNACGIRYKKEER+AA++
Sbjct: 160 ALLDRRCANCGTASTPLWRNGPRGPKSLCNACGIRYKKEERRAAAT 193

[Close]

BLAST of Cucsat.G1874 vs. NCBI nr
Match: XP_004143515.1 (GATA transcription factor 18 [Cucumis sativus] >KGN48832.1 hypothetical protein Csa_002842 [Cucumis sativus])

HSP 1 Score: 453 bits (1165), Expect = 3.26e-160
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 48  MMQRCGSYQCYSAGECSCNGFYGQQGTYFSMPSYNNYYETEHYSFESSSPVDCTLSLGTP 107
           MMQRCGSYQCYSAGECSCNGFYGQQGTYFSMPSYNNYYETEHYSFESSSPVDCTLSLGTP
Sbjct: 1   MMQRCGSYQCYSAGECSCNGFYGQQGTYFSMPSYNNYYETEHYSFESSSPVDCTLSLGTP 60

Query: 108 STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANIGSDKSNANNGDQMFAR 167
           STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANIGSDKSNANNGDQMFAR
Sbjct: 61  STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANIGSDKSNANNGDQMFAR 120

Query: 168 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQASSWLQHHSHSQKAPR 227
           HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQASSWLQHHSHSQKAPR
Sbjct: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQASSWLQHHSHSQKAPR 180

Query: 228 FSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 261
           FSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS
Sbjct: 181 FSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 214

[Close]

BLAST of Cucsat.G1874 vs. NCBI nr
Match: XP_008440715.1 (PREDICTED: GATA transcription factor 18 [Cucumis melo] >KAA0036226.1 GATA transcription factor 18 [Cucumis melo var. makuwa] >TYK12620.1 GATA transcription factor 18 [Cucumis melo var. makuwa])

HSP 1 Score: 437 bits (1124), Expect = 7.74e-154
Identity = 208/222 (93.69%), Postives = 212/222 (95.50%), Query Frame = 0


Query: 48  MMQRCGSYQCYSAGECSCNGFYGQQGTYFSMPSYNNYYETEHYSFESSSPVDCTLSLGTP 107
           MMQRCGSYQCYSAGECSCNG+YGQQGTYFS+P+YNNYYETEHYSFESSSPVDCTLSLGTP
Sbjct: 1   MMQRCGSYQCYSAGECSCNGYYGQQGTYFSLPTYNNYYETEHYSFESSSPVDCTLSLGTP 60

Query: 108 STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANIGSDKSNANNGDQMFAR 167
           STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSAN GSDKSNANNGDQMFAR
Sbjct: 61  STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANSGSDKSNANNGDQMFAR 120

Query: 168 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQA--------SSWLQHH 227
           HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQA        SSWLQHH
Sbjct: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYRNEASSWLQHH 180

Query: 228 SHSQKAPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 261
           SHSQ+ PRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS
Sbjct: 181 SHSQRTPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 222

[Close]

BLAST of Cucsat.G1874 vs. NCBI nr
Match: XP_038883344.1 (GATA transcription factor 18 [Benincasa hispida])

HSP 1 Score: 409 bits (1052), Expect = 7.00e-143
Identity = 197/223 (88.34%), Postives = 205/223 (91.93%), Query Frame = 0


Query: 48  MMQRCGSYQCYSAGECSCNGFYGQQGTYFSMPSYNNYYETEHYSFESSSPVDCTLSLGTP 107
           MMQRCGSYQCYSAGECSC GFYGQQG+YFSMP+YNNYYETEHYSFESSSPVDCTLSLGTP
Sbjct: 1   MMQRCGSYQCYSAGECSCGGFYGQQGSYFSMPTYNNYYETEHYSFESSSPVDCTLSLGTP 60

Query: 108 STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANIGSDKSNANNGDQMFAR 167
           STRMTEYDEKRREEQH ASNFTWDLPRTKHPHSSKTTRR  AN G+DKSNAN  DQMFAR
Sbjct: 61  STRMTEYDEKRREEQHPASNFTWDLPRTKHPHSSKTTRRG-ANSGADKSNAN-ADQMFAR 120

Query: 168 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQ---------QASSWLQH 227
           HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQ         +ASSWLQH
Sbjct: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQPANAIMYRNEASSWLQH 180

Query: 228 HSHSQKAPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 261
           H+HSQ+ PRF+HGI NELNPSVAFL+WSLNDTEQPQLYYDFTS
Sbjct: 181 HTHSQRTPRFAHGITNELNPSVAFLSWSLNDTEQPQLYYDFTS 221

[Close]

BLAST of Cucsat.G1874 vs. NCBI nr
Match: XP_022978554.1 (GATA transcription factor 18-like [Cucurbita maxima])

HSP 1 Score: 393 bits (1010), Expect = 1.69e-136
Identity = 190/222 (85.59%), Postives = 198/222 (89.19%), Query Frame = 0


Query: 48  MMQRCGSYQCYSAGECSCNGFYGQQGTYFSMPSYNNYYETEHYSFESSSPVDCTLSLGTP 107
           MMQRCGSYQCYSAGECSC  FYGQQG+YFS P+YNNYYE+EHYSF+SSSPVDCTLSLGTP
Sbjct: 1   MMQRCGSYQCYSAGECSCGAFYGQQGSYFSTPAYNNYYESEHYSFDSSSPVDCTLSLGTP 60

Query: 108 STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANIGSDKSNANNGDQMFAR 167
           STRMTEYDEKRREEQHSASNF WDL RTKH HSSKT+RRS  N G DKS AN GDQMF+R
Sbjct: 61  STRMTEYDEKRREEQHSASNFAWDLSRTKHGHSSKTSRRS-GNTGGDKSRAN-GDQMFSR 120

Query: 168 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQA--------SSWLQHH 227
           HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQA        SSWLQHH
Sbjct: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYKNEASSWLQHH 180

Query: 228 SHSQKAPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 261
           SHSQK PRF HGI N+LNP VAFL+WSLNDTEQPQLYYDFTS
Sbjct: 181 SHSQKTPRFPHGITNDLNPGVAFLSWSLNDTEQPQLYYDFTS 220

[Close]

BLAST of Cucsat.G1874 vs. NCBI nr
Match: XP_022949779.1 (GATA transcription factor 18-like [Cucurbita moschata] >XP_023544803.1 GATA transcription factor 18-like [Cucurbita pepo subsp. pepo] >KAG7034143.1 GATA transcription factor 18, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 391 bits (1004), Expect = 1.39e-135
Identity = 189/222 (85.14%), Postives = 197/222 (88.74%), Query Frame = 0


Query: 48  MMQRCGSYQCYSAGECSCNGFYGQQGTYFSMPSYNNYYETEHYSFESSSPVDCTLSLGTP 107
           MMQRCGSYQCYSAGECSC  FY QQG+YFS P+YNNYYE+EHYSF+SSSPVDCTLSLGTP
Sbjct: 1   MMQRCGSYQCYSAGECSCGAFYAQQGSYFSTPAYNNYYESEHYSFDSSSPVDCTLSLGTP 60

Query: 108 STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANIGSDKSNANNGDQMFAR 167
           STRMTEYDEKRREEQHSASNF WDL RTKH HSSKT+RRS  N G DKS AN GDQMF+R
Sbjct: 61  STRMTEYDEKRREEQHSASNFAWDLSRTKHGHSSKTSRRS-GNTGGDKSRAN-GDQMFSR 120

Query: 168 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQA--------SSWLQHH 227
           HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQA        SSWLQHH
Sbjct: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYKNEASSWLQHH 180

Query: 228 SHSQKAPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 261
           SHSQK PRF HGI N+LNP VAFL+WSLNDTEQPQLYYDFTS
Sbjct: 181 SHSQKTPRFPHGITNDLNPGVAFLSWSLNDTEQPQLYYDFTS 220

[Close]

BLAST of Cucsat.G1874 vs. ExPASy TrEMBL
Match: A0A0A0KKD2 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G502700 PE=3 SV=1)

HSP 1 Score: 453 bits (1165), Expect = 1.58e-160
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 48  MMQRCGSYQCYSAGECSCNGFYGQQGTYFSMPSYNNYYETEHYSFESSSPVDCTLSLGTP 107
           MMQRCGSYQCYSAGECSCNGFYGQQGTYFSMPSYNNYYETEHYSFESSSPVDCTLSLGTP
Sbjct: 1   MMQRCGSYQCYSAGECSCNGFYGQQGTYFSMPSYNNYYETEHYSFESSSPVDCTLSLGTP 60

Query: 108 STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANIGSDKSNANNGDQMFAR 167
           STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANIGSDKSNANNGDQMFAR
Sbjct: 61  STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANIGSDKSNANNGDQMFAR 120

Query: 168 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQASSWLQHHSHSQKAPR 227
           HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQASSWLQHHSHSQKAPR
Sbjct: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQASSWLQHHSHSQKAPR 180

Query: 228 FSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 261
           FSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS
Sbjct: 181 FSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 214

[Close]

BLAST of Cucsat.G1874 vs. ExPASy TrEMBL
Match: A0A5A7T229 (GATA transcription factor 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002070 PE=3 SV=1)

HSP 1 Score: 437 bits (1124), Expect = 3.75e-154
Identity = 208/222 (93.69%), Postives = 212/222 (95.50%), Query Frame = 0


Query: 48  MMQRCGSYQCYSAGECSCNGFYGQQGTYFSMPSYNNYYETEHYSFESSSPVDCTLSLGTP 107
           MMQRCGSYQCYSAGECSCNG+YGQQGTYFS+P+YNNYYETEHYSFESSSPVDCTLSLGTP
Sbjct: 1   MMQRCGSYQCYSAGECSCNGYYGQQGTYFSLPTYNNYYETEHYSFESSSPVDCTLSLGTP 60

Query: 108 STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANIGSDKSNANNGDQMFAR 167
           STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSAN GSDKSNANNGDQMFAR
Sbjct: 61  STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANSGSDKSNANNGDQMFAR 120

Query: 168 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQA--------SSWLQHH 227
           HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQA        SSWLQHH
Sbjct: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYRNEASSWLQHH 180

Query: 228 SHSQKAPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 261
           SHSQ+ PRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS
Sbjct: 181 SHSQRTPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 222

[Close]

BLAST of Cucsat.G1874 vs. ExPASy TrEMBL
Match: A0A1S3B2I6 (GATA transcription factor 18 OS=Cucumis melo OX=3656 GN=LOC103485050 PE=3 SV=1)

HSP 1 Score: 437 bits (1124), Expect = 3.75e-154
Identity = 208/222 (93.69%), Postives = 212/222 (95.50%), Query Frame = 0


Query: 48  MMQRCGSYQCYSAGECSCNGFYGQQGTYFSMPSYNNYYETEHYSFESSSPVDCTLSLGTP 107
           MMQRCGSYQCYSAGECSCNG+YGQQGTYFS+P+YNNYYETEHYSFESSSPVDCTLSLGTP
Sbjct: 1   MMQRCGSYQCYSAGECSCNGYYGQQGTYFSLPTYNNYYETEHYSFESSSPVDCTLSLGTP 60

Query: 108 STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANIGSDKSNANNGDQMFAR 167
           STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSAN GSDKSNANNGDQMFAR
Sbjct: 61  STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANSGSDKSNANNGDQMFAR 120

Query: 168 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQA--------SSWLQHH 227
           HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQA        SSWLQHH
Sbjct: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYRNEASSWLQHH 180

Query: 228 SHSQKAPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 261
           SHSQ+ PRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS
Sbjct: 181 SHSQRTPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 222

[Close]

BLAST of Cucsat.G1874 vs. ExPASy TrEMBL
Match: A0A6J1IUC2 (GATA transcription factor 18-like OS=Cucurbita maxima OX=3661 GN=LOC111478501 PE=3 SV=1)

HSP 1 Score: 393 bits (1010), Expect = 8.18e-137
Identity = 190/222 (85.59%), Postives = 198/222 (89.19%), Query Frame = 0


Query: 48  MMQRCGSYQCYSAGECSCNGFYGQQGTYFSMPSYNNYYETEHYSFESSSPVDCTLSLGTP 107
           MMQRCGSYQCYSAGECSC  FYGQQG+YFS P+YNNYYE+EHYSF+SSSPVDCTLSLGTP
Sbjct: 1   MMQRCGSYQCYSAGECSCGAFYGQQGSYFSTPAYNNYYESEHYSFDSSSPVDCTLSLGTP 60

Query: 108 STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANIGSDKSNANNGDQMFAR 167
           STRMTEYDEKRREEQHSASNF WDL RTKH HSSKT+RRS  N G DKS AN GDQMF+R
Sbjct: 61  STRMTEYDEKRREEQHSASNFAWDLSRTKHGHSSKTSRRS-GNTGGDKSRAN-GDQMFSR 120

Query: 168 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQA--------SSWLQHH 227
           HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQA        SSWLQHH
Sbjct: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYKNEASSWLQHH 180

Query: 228 SHSQKAPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 261
           SHSQK PRF HGI N+LNP VAFL+WSLNDTEQPQLYYDFTS
Sbjct: 181 SHSQKTPRFPHGITNDLNPGVAFLSWSLNDTEQPQLYYDFTS 220

[Close]

BLAST of Cucsat.G1874 vs. ExPASy TrEMBL
Match: A0A6J1GDX7 (GATA transcription factor 18-like OS=Cucurbita moschata OX=3662 GN=LOC111453070 PE=3 SV=1)

HSP 1 Score: 391 bits (1004), Expect = 6.71e-136
Identity = 189/222 (85.14%), Postives = 197/222 (88.74%), Query Frame = 0


Query: 48  MMQRCGSYQCYSAGECSCNGFYGQQGTYFSMPSYNNYYETEHYSFESSSPVDCTLSLGTP 107
           MMQRCGSYQCYSAGECSC  FY QQG+YFS P+YNNYYE+EHYSF+SSSPVDCTLSLGTP
Sbjct: 1   MMQRCGSYQCYSAGECSCGAFYAQQGSYFSTPAYNNYYESEHYSFDSSSPVDCTLSLGTP 60

Query: 108 STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANIGSDKSNANNGDQMFAR 167
           STRMTEYDEKRREEQHSASNF WDL RTKH HSSKT+RRS  N G DKS AN GDQMF+R
Sbjct: 61  STRMTEYDEKRREEQHSASNFAWDLSRTKHGHSSKTSRRS-GNTGGDKSRAN-GDQMFSR 120

Query: 168 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQA--------SSWLQHH 227
           HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQA        SSWLQHH
Sbjct: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYKNEASSWLQHH 180

Query: 228 SHSQKAPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 261
           SHSQK PRF HGI N+LNP VAFL+WSLNDTEQPQLYYDFTS
Sbjct: 181 SHSQKTPRFPHGITNDLNPGVAFLSWSLNDTEQPQLYYDFTS 220

[Close]

BLAST of Cucsat.G1874 vs. TAIR 10
Match: AT3G50870.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 136.3 bits (342), Expect = 3.4e-32
Identity = 104/295 (35.25%), Postives = 133/295 (45.08%), Query Frame = 0


Query: 37  QTPLFCISPQTMMQRCGSYQCYSAGECSCNGFYGQQGTY---FSMPSYNNYYETEHYSFE 96
           QTP    +       CG +  +S   C  N      G+Y   FSM +   + +       
Sbjct: 3   QTPYTTSTQGQYCHSCGMFHHHSQSCCYNNNNNSNAGSYSMVFSMQNGGVFEQNGEDYHH 62

Query: 97  SSSPVDCTLSLGTPSTRMTEYDEKRREEQHSA-----SNFTWDLPRTKHPHSSKTT---- 156
           SSS VDCTLSLGTPSTR+ E DEKRR    S      SNF WDL  TK+ ++SKT     
Sbjct: 63  SSSLVDCTLSLGTPSTRLCEEDEKRRRSTSSGASSCISNF-WDLIHTKN-NNSKTAPYNN 122

Query: 157 ---------RRSSANIGSDKSNANNGDQMFARHCANCDTTTTPLWRNGPSGPKSLCNACG 216
                     R  +  G        GD + AR CANCDTT+TPLWRNGP GPKSLCNACG
Sbjct: 123 VPSFSANKPSRGCSGGGGGGGGGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACG 182

Query: 217 IRYKKEERKAA---------------------------------SSGQQASSWLQHHSHS 261
           IR+KKEER+                                   ++    + W  HHS +
Sbjct: 183 IRFKKEERRTTAATGNTVVGAAPVQTDQYGHHNSGYNNYHAATNNNNNNGTPWAHHHS-T 242

[Close]

BLAST of Cucsat.G1874 vs. TAIR 10
Match: AT4G36620.1 (GATA transcription factor 19 )

HSP 1 Score: 123.2 bits (308), Expect = 3.0e-28
Identity = 81/225 (36.00%), Postives = 108/225 (48.00%), Query Frame = 0


Query: 81  YNNYYETEHYSFESSSP---VDCTLSLGTPSTRMTEYDEKRREEQHSASNFTWDLPRTKH 140
           ++ ++  E+     SSP   VDCTLSLGTPSTR+   D++RR   H++    WD      
Sbjct: 3   FSMFFSPENDVSHHSSPYASVDCTLSLGTPSTRLCNEDDERRFSSHTSDTIGWDFLN--- 62

Query: 141 PHSSKTTRRSSANIGSDKSNANNGDQMFARHCANCDTTTTPLWRNGPSGPKSLCNACGIR 200
                         GS K     G  + AR CANCDTT+TPLWRNGP GPKSLCNACGIR
Sbjct: 63  --------------GSKKGGGGGGHNLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIR 122

Query: 201 YKKEERKAA------------------------------SSGQQASSWLQHHSH-SQKAP 260
           +KKEER+A+                              ++ Q ASS   HH H +Q+ P
Sbjct: 123 FKKEERRASTARNSTSGGGSTAAGVPTLDHQASANYYYNNNNQYASSSPWHHQHNTQRVP 182

[Close]

BLAST of Cucsat.G1874 vs. TAIR 10
Match: AT2G18380.1 (GATA transcription factor 20 )

HSP 1 Score: 102.8 bits (255), Expect = 4.2e-22
Identity = 57/126 (45.24%), Postives = 77/126 (61.11%), Query Frame = 0


Query: 82  NNYYETEHYSFESSSPVDCTLSLGTPSTRMTEYDEKRREEQHSASNFTWDLPRTKHPHSS 141
           N++    + +F SS+ VDCTLSLGTPSTR+   D+  R    +++N + D     H  ++
Sbjct: 22  NHHNYDPYNNFSSSTSVDCTLSLGTPSTRL---DDHHRFSSANSNNISGDF--YIHGGNA 81

Query: 142 KTTRRSSANIGSDKSNANNGDQMFARHCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKE 201
           KT+      +               R CA+CDTT+TPLWRNGP GPKSLCNACGIR+KKE
Sbjct: 82  KTSSYKKGGVA----------HSLPRRCASCDTTSTPLWRNGPKGPKSLCNACGIRFKKE 132

Query: 202 ERKAAS 208
           ER+A +
Sbjct: 142 ERRATA 132

[Close]

BLAST of Cucsat.G1874 vs. TAIR 10
Match: AT5G56860.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 68.6 bits (166), Expect = 8.7e-12
Identity = 48/131 (36.64%), Postives = 64/131 (48.85%), Query Frame = 0


Query: 82  NNYYETEHYSFESSSPVDCTLSLGTPSTRMTEYDEKRREEQHSASNFTWDLPRTKHPHSS 141
           NN+ E++HY                P    T +D    E+ H   NF   L R     ++
Sbjct: 171 NNHKESDHY----------------PLNHKTNFD----EDHHEDLNFKNVLTRKT---TA 230

Query: 142 KTTRRSSANIGSDKSNANNGDQMFARHCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKE 201
            TT      I  +  + NNG     R C++C+TT TPLWR+GP GPKSLCNACGIR +K 
Sbjct: 231 ATTENRYNTINENGYSNNNG---VIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKA 275

Query: 202 ERKAASSGQQA 213
            R A ++   A
Sbjct: 291 RRAAMAAAAAA 275

[Close]

BLAST of Cucsat.G1874 vs. TAIR 10
Match: AT4G26150.1 (cytokinin-responsive gata factor 1 )

HSP 1 Score: 66.2 bits (160), Expect = 4.3e-11
Identity = 35/75 (46.67%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 135 TKHPHSSKTTRRSSANI-GSDKSNANNGDQMFARHCANCDTTTTPLWRNGPSGPKSLCNA 194
           T       T    S+N+  S++ N  N D +  R C++C+TT TPLWR+GP GPKSLCNA
Sbjct: 167 TSDSSKQHTNNDQSSNLSNSERQNGYNNDCVI-RICSDCNTTKTPLWRSGPRGPKSLCNA 226

Query: 195 CGIRYKKEERKAASS 209
           CGIR +K  R A ++
Sbjct: 227 CGIRQRKARRAAMAT 240

The following BLAST results are available for this feature:

BLAST of Cucsat.G1874 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LC79	4.8e-31	35.25	GATA transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=GATA18 PE=1 SV=2	[more]
Q6QPM2	4.2e-27	36.00	GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2	[more]
Q9ZPX0	5.9e-21	45.24	GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2	[more]
B8AX51	8.0e-18	39.16	GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE...	[more]
Q6L5E5	8.0e-18	39.16	GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 ...	[more]

BLAST of Cucsat.G1874 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143515.1	3.26e-160	100.00	GATA transcription factor 18 [Cucumis sativus] >KGN48832.1 hypothetical protein ...	[more]
XP_008440715.1	7.74e-154	93.69	PREDICTED: GATA transcription factor 18 [Cucumis melo] >KAA0036226.1 GATA transc...	[more]
XP_038883344.1	7.00e-143	88.34	GATA transcription factor 18 [Benincasa hispida]	[more]
XP_022978554.1	1.69e-136	85.59	GATA transcription factor 18-like [Cucurbita maxima]	[more]
XP_022949779.1	1.39e-135	85.14	GATA transcription factor 18-like [Cucurbita moschata] >XP_023544803.1 GATA tran...	[more]

BLAST of Cucsat.G1874 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKD2	1.58e-160	100.00	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G502700 P...	[more]
A0A5A7T229	3.75e-154	93.69	GATA transcription factor 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3B2I6	3.75e-154	93.69	GATA transcription factor 18 OS=Cucumis melo OX=3656 GN=LOC103485050 PE=3 SV=1	[more]
A0A6J1IUC2	8.18e-137	85.59	GATA transcription factor 18-like OS=Cucurbita maxima OX=3661 GN=LOC111478501 PE...	[more]
A0A6J1GDX7	6.71e-136	85.14	GATA transcription factor 18-like OS=Cucurbita moschata OX=3662 GN=LOC111453070 ...	[more]

BLAST of Cucsat.G1874 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50870.1	3.4e-32	35.25	GATA type zinc finger transcription factor family protein	[more]
AT4G36620.1	3.0e-28	36.00	GATA transcription factor 19	[more]
AT2G18380.1	4.2e-22	45.24	GATA transcription factor 20	[more]
AT5G56860.1	8.7e-12	36.64	GATA type zinc finger transcription factor family protein	[more]
AT4G26150.1	4.3e-11	46.67	cytokinin-responsive gata factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 163..214 e-value: 2.1E-18 score: 77.1
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 169..203 e-value: 3.9E-18 score: 64.8
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 169..194
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 163..199 score: 14.245893
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 169..200 e-value: 3.61994E-14 score: 63.5458
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 165..227 e-value: 3.4E-17 score: 64.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..160
None	No IPR available	PANTHER	PTHR46813:SF5	GATA TRANSCRIPTION FACTOR 18	coord: 48..258
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 166..204
IPR044272	GATA transcription factor 18/19/20	PANTHER	PTHR46813	GATA TRANSCRIPTION FACTOR 18	coord: 48..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G1874.T1	Cucsat.G1874.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009908	flower development
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding