Cucsat.G18536 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGAGGTGGTGGTGTTGGTGGTGGTGGTCCTCCGGTGAGTTCACGGTGGAATCCGACAAAAGAGCAAATAAGCATATTGGAGAATTTGTATAGACAAGGAGTGAGAACGCCAAGTGCTGATCAAATACAGCAGATAACGGTTAGGCTTAAGGATTATGGTCATATTGAAGGCAAAAATGTGTTCTATTGGTTTCAAAATCATAAAGCTAGACAAAGGCAGAAGCAAAAACAACAACATCATCATCATCATTTTAATTCCTCTTTCCCTTTTTTTAATCACTTCCTTCACTTCAATCACAACAACTCTCCTTTCCCTCCTCCTCCTCCTCCTCCCAATAATGGTTCGTCTAAACCTCATCTCCCTCATACATACTATACTATACTAATACTTCTGTTGAGTTATGTTCGTTTTCAGATCTTTTATTACCTTACGTTCATGGAGTATCTTTTTCTTTTATTCTCTTTTGATTTGACCCAAAAAAGAAAAAAAGTTCAAATCGTGCTACTTTTCTTTTCTTTCAATGTCAAGATATATCTTTTCATACTGATCAAAACATCTCAAAATCCATTTTTTCCGTTTGATCTCTTTCAAACTATCATATGTGATATTGATTGATTAGGTTGTTAAGAAATTAAATTCACATCTAATCCCATTAGGATAAATTTTGTTGGGTTTAATTCTAATTTCAACTTGTGTTTTTCGTTTGATAAATATTTTGTTTATGAAAATTTTAAGTTTGTTTATTCATTTAATTCTTAGTGAAATTTCAAACACAATACAAAATAGTTAATACTGTTTTAAAATTTGAAATATTAAATTTTTCAAAACATGTGTTGGATTAGAAAGTTATATCCTAAGCTTAATATTCAAAATCTAAAATTGAAAGACATTTCTATGTTTGAGTATTGTAATGTTATTTGTTGATAATCACTTAACGTTAAAAACTCTACTTATCGATAATCTTAGAGCTTCTTCTTTTGTTGTGTACAATTGTAATGAAATTATTTTTGACTAATATGAAAATTTCTTGTTTTGTTTATTGTTATTCTGATCAGTGGTTTGCAGCCCATACTACGTACATCAAAACGACGTCGGATTATATCCACAATACCAAAACAATTCAATGGTGATTCAAAGCGGTGGGATTGTGAAGAAAAGATCAAAAA GGAGGTGGTGGTGTTGGTGGTGGTGGTCCTCCGGTGAGTTCACGGTGGAATCCGACAAAAGAGCAAATAAGCATATTGGAGAATTTGTATAGACAAGGAGTGAGAACGCCAAGTGCTGATCAAATACAGCAGATAACGGTTAGGCTTAAGGATTATGGTCATATTGAAGGCAAAAATGTGTTCTATTGGTTTCAAAATCATAAAGCTAGACAAAGGCAGAAGCAAAAACAACAACATCATCATCATCATTTTAATTCCTCTTTCCCTTTTTTTAATCACTTCCTTCACTTCAATCACAACAACTCTCCTTTCCCTCCTCCTCCTCCTCCTCCCAATAATGTGGTTTGCAGCCCATACTACGTACATCAAAACGACGTCGGATTATATCCACAATACCAAAACAATTCAATGGTGATTCAAAGCGGTGGGATTGTGAAGAAAAGATCAAAA GGGGVGGGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQNHKARQRQKQKQQHHHHHFNSSFPFFNHFLHFNHNNSPFPPPPPPPNNVVCSPYYVHQNDVGLYPQYQNNSMVIQSGGIVKKRSK Homology
BLAST of Cucsat.G18536 vs. ExPASy Swiss-Prot
Match: Q6X7K1 (WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana OX=3702 GN=WOX2 PE=2 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.6e-31 Identity = 81/148 (54.73%), Postives = 96/148 (64.86%), Query Frame = 0
BLAST of Cucsat.G18536 vs. ExPASy Swiss-Prot
Match: A2WWU7 (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica OX=39946 GN=WOX5 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 7.8e-26 Identity = 84/182 (46.15%), Postives = 100/182 (54.95%), Query Frame = 0
BLAST of Cucsat.G18536 vs. ExPASy Swiss-Prot
Match: Q8LR86 (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX5 PE=2 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 7.8e-26 Identity = 84/182 (46.15%), Postives = 100/182 (54.95%), Query Frame = 0
BLAST of Cucsat.G18536 vs. ExPASy Swiss-Prot
Match: Q6X7K0 (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2) HSP 1 Score: 109.0 bits (271), Expect = 4.7e-23 Identity = 53/76 (69.74%), Postives = 62/76 (81.58%), Query Frame = 0
BLAST of Cucsat.G18536 vs. ExPASy Swiss-Prot
Match: Q6X7J9 (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.5e-21 Identity = 47/69 (68.12%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of Cucsat.G18536 vs. NCBI nr
Match: KGN65708.1 (hypothetical protein Csa_019930 [Cucumis sativus]) HSP 1 Score: 298 bits (762), Expect = 2.27e-100 Identity = 148/154 (96.10%), Postives = 148/154 (96.10%), Query Frame = 0
BLAST of Cucsat.G18536 vs. NCBI nr
Match: XP_022158904.1 (WUSCHEL-related homeobox 2 [Momordica charantia]) HSP 1 Score: 194 bits (492), Expect = 9.54e-60 Identity = 101/143 (70.63%), Postives = 108/143 (75.52%), Query Frame = 0
BLAST of Cucsat.G18536 vs. NCBI nr
Match: KAG7036919.1 (WUSCHEL-related homeobox 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 185 bits (469), Expect = 2.53e-56 Identity = 97/136 (71.32%), Postives = 107/136 (78.68%), Query Frame = 0
BLAST of Cucsat.G18536 vs. NCBI nr
Match: XP_022998665.1 (WUSCHEL-related homeobox 2-like [Cucurbita maxima]) HSP 1 Score: 182 bits (462), Expect = 3.98e-55 Identity = 96/136 (70.59%), Postives = 104/136 (76.47%), Query Frame = 0
BLAST of Cucsat.G18536 vs. NCBI nr
Match: KAG6607233.1 (Inner membrane protein ALBINO3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 185 bits (469), Expect = 2.80e-52 Identity = 97/136 (71.32%), Postives = 107/136 (78.68%), Query Frame = 0
BLAST of Cucsat.G18536 vs. ExPASy TrEMBL
Match: A0A0A0LVA9 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G505930 PE=3 SV=1) HSP 1 Score: 298 bits (762), Expect = 1.10e-100 Identity = 148/154 (96.10%), Postives = 148/154 (96.10%), Query Frame = 0
BLAST of Cucsat.G18536 vs. ExPASy TrEMBL
Match: A0A6J1E0T1 (WUSCHEL-related homeobox 2 OS=Momordica charantia OX=3673 GN=LOC111025366 PE=3 SV=1) HSP 1 Score: 194 bits (492), Expect = 4.62e-60 Identity = 101/143 (70.63%), Postives = 108/143 (75.52%), Query Frame = 0
BLAST of Cucsat.G18536 vs. ExPASy TrEMBL
Match: A0A6J1KD41 (WUSCHEL-related homeobox 2-like OS=Cucurbita maxima OX=3661 GN=LOC111493249 PE=3 SV=1) HSP 1 Score: 182 bits (462), Expect = 1.93e-55 Identity = 96/136 (70.59%), Postives = 104/136 (76.47%), Query Frame = 0
BLAST of Cucsat.G18536 vs. ExPASy TrEMBL
Match: A0A1J6IBB8 (Wuschel-related homeobox 2 OS=Nicotiana attenuata OX=49451 GN=WOX2 PE=3 SV=1) HSP 1 Score: 169 bits (429), Expect = 5.12e-50 Identity = 85/139 (61.15%), Postives = 102/139 (73.38%), Query Frame = 0
BLAST of Cucsat.G18536 vs. ExPASy TrEMBL
Match: A0A5J5C598 (Homeobox domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_000934 PE=3 SV=1) HSP 1 Score: 169 bits (427), Expect = 1.06e-49 Identity = 90/142 (63.38%), Postives = 105/142 (73.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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