Cucsat.G17942 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTAATTTGAAAACCGAAACGCTTTTGTAAAGATTGAAATTGAATGAAGTTAAAAGTAGTAGTGACGAAAATGGGTTTTTAACCTTATTTTAACAGATTGGGTGTGTGACATTAGGTGGAGCCCAAAGATATGGTTTTTTAAATTTTCTTTAAGAGAGAGTGGGGGAGGTTGAAACTTCAGCATATAATTGTAGGTCTCAAGGAAAGACCTGCGTTGGTTTCCATTTGTTAAGGGAAAAAGAGATATCAAGAAGAAAAGAGATGGGAAGAGCTCCTTGTTGTGACAAAGCAAATGTGAAAAAAGGGCCATGGTCACCTGAAGAGGATTCTAAGCTCAAACATCACATTGAAACTTATGGAACTGGTGGCAATTGGATTTCCCTTCCTCAAAAAGCTGGTAGGCTCCCCGTCTGATCTCATTTTCCTCTTTTCTTTTAAGTACTTGATCAAGATTCAAATATTTGACCTTCTAATCACTCTCTTAACCTGTTGATCAGCACTGATGCTTAAATCAATTTGTCAGGTCTTAGAAGATGTGGGAAGAGTTGTAGATTGAGATGGCTTAATTATCTTAGACCCAACATCAAGCATGGTGAATTTTCAGCTGAGGAAGATAGAATCATTTGTACTCTATTTGCCACTATTGGCAGCCGGTAATGAAATATTACAAGTACATATCAGTTAGACACATTTATTTTTCCATGAAAACCTAATTCTGACTATGTACATCATTTAGATGGTCAATTATTGCTGCTCAATTGCCGGGAAGGACCGACAACGATATAAAGAACTATTGGAATACGAAGTTGAAGAAGAAACTTATGATGGGGATGGTATCATCTTCTTCTACTGCTAATACAACTCATTGTGCTCCACAAGCAGAGGTCATTAGAAAGATTGAAACTTTATCACCAAAACCCCATCAAAATCACTCCTTCGAATATCAACCATTCTCCAATGTTAGTTATGAACCATTATTATCCACTAGTTATTCAATCCCATTATTCAACTATTGTAATAACCCAATTAGTAGCTGTTTGGTAACCAACCCTTTTGACCAAAACAATAACTTCTATGAAACCCTAAAACCAAACCAAATGGGGTTTGAGTTTGATGAATTAGAATATGGTGGGTTAAACTCAAATAGTTTCAACAATGGGTTATTGTTTGATGAGAAGATGAAGATGATGCAGCAAAACAACAATGGGAATGAAGGGTATAACGGTAATTATGTTGAGGGAAATACAATGATGATGAAGGAAGAGGAAGAGATGATGGAGCAAAAAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAGAGAAGTACAAAGTGATGGAGGGAGTTTTGAGATTCTGACAACTGACTGTTAAGTGTAAAATCAAGAAAGATTTGATGGGGTATGGGAGGAACTGCCACAAATATATCACACCAAATTACTTTCAATATTTATTGGGTTTTGTGTGTTTTTATGTTTCTTCCTTTTTTCTTTTTCTTTCTTTTTTTGTTTGGTTTAGGTAAATTGGTAAATTGGTAAATTGGATGTGAAATGAAATGGTCTGTTTAATTTATTTTCTTTTGCTCTATATTTCTATAT ATGGGAAGAGCTCCTTGTTGTGACAAAGCAAATGTGAAAAAAGGGCCATGGTCACCTGAAGAGGATTCTAAGCTCAAACATCACATTGAAACTTATGGAACTGGTGGCAATTGGATTTCCCTTCCTCAAAAAGCTGGTCTTAGAAGATGTGGGAAGAGTTGTAGATTGAGATGGCTTAATTATCTTAGACCCAACATCAAGCATGGTGAATTTTCAGCTGAGGAAGATAGAATCATTTGTACTCTATTTGCCACTATTGGCAGCCGATGGTCAATTATTGCTGCTCAATTGCCGGGAAGGACCGACAACGATATAAAGAACTATTGGAATACGAAGTTGAAGAAGAAACTTATGATGGGGATGGTATCATCTTCTTCTACTGCTAATACAACTCATTGTGCTCCACAAGCAGAGGTCATTAGAAAGATTGAAACTTTATCACCAAAACCCCATCAAAATCACTCCTTCGAATATCAACCATTCTCCAATGTTAGTTATGAACCATTATTATCCACTAGTTATTCAATCCCATTATTCAACTATTGTAATAACCCAATTAGTAGCTGTTTGGTAACCAACCCTTTTGACCAAAACAATAACTTCTATGAAACCCTAAAACCAAACCAAATGGGGTTTGAGTTTGATGAATTAGAATATGGTGGGTTAAACTCAAATAGTTTCAACAATGGGTTATTGTTTGATGAGAAGATGAAGATGATGCAGCAAAACAACAATGGGAATGAAGGGTATAACGGTAATTATGTTGAGGGAAATACAATGATGATGAAGGAAGAGGAAGAGATGATGGAGCAAAAAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAGAGAAGTACAAAGTGA MGRAPCCDKANVKKGPWSPEEDSKLKHHIETYGTGGNWISLPQKAGLRRCGKSCRLRWLNYLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMMGMVSSSSTANTTHCAPQAEVIRKIETLSPKPHQNHSFEYQPFSNVSYEPLLSTSYSIPLFNYCNNPISSCLVTNPFDQNNNFYETLKPNQMGFEFDELEYGGLNSNSFNNGLLFDEKMKMMQQNNNGNEGYNGNYVEGNTMMMKEEEEMMEQKREEEEEEEEEEQRSTK Homology
BLAST of Cucsat.G17942 vs. NCBI nr
Match: XP_011657019.1 (transcription factor RAX1-like [Cucumis sativus] >KAE8646891.1 hypothetical protein Csa_020919 [Cucumis sativus]) HSP 1 Score: 320 bits (821), Expect = 2.78e-108 Identity = 168/171 (98.25%), Postives = 168/171 (98.25%), Query Frame = 0
BLAST of Cucsat.G17942 vs. NCBI nr
Match: XP_008465353.1 (PREDICTED: transcription factor RAX1-like [Cucumis melo]) HSP 1 Score: 275 bits (703), Expect = 2.05e-90 Identity = 141/159 (88.68%), Postives = 148/159 (93.08%), Query Frame = 0
BLAST of Cucsat.G17942 vs. NCBI nr
Match: KAA0035227.1 (transcription factor RAX1-like [Cucumis melo var. makuwa]) HSP 1 Score: 238 bits (608), Expect = 2.69e-76 Identity = 116/132 (87.88%), Postives = 123/132 (93.18%), Query Frame = 0
BLAST of Cucsat.G17942 vs. NCBI nr
Match: XP_038902615.1 (transcription factor RAX1-like [Benincasa hispida]) HSP 1 Score: 160 bits (406), Expect = 2.17e-45 Identity = 104/167 (62.28%), Postives = 125/167 (74.85%), Query Frame = 0
BLAST of Cucsat.G17942 vs. ExPASy TrEMBL
Match: A0A1S3CNN7 (transcription factor RAX1-like OS=Cucumis melo OX=3656 GN=LOC103502992 PE=4 SV=1) HSP 1 Score: 275 bits (703), Expect = 9.94e-91 Identity = 141/159 (88.68%), Postives = 148/159 (93.08%), Query Frame = 0
BLAST of Cucsat.G17942 vs. ExPASy TrEMBL
Match: A0A5A7T0W8 (Transcription factor RAX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold228G00030 PE=4 SV=1) HSP 1 Score: 238 bits (608), Expect = 1.30e-76 Identity = 116/132 (87.88%), Postives = 123/132 (93.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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