Cucsat.G17895 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G17895
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Small ubiquitin-related modifier
Location	ctg3345: 788345 .. 790624 (+)
RNA-Seq Expression	Cucsat.G17895
Synteny	Cucsat.G17895

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAGTTTTTAAAAAACTTATTCCCTCTTTTTGACGAAGCGGAAATTGGGAAAATTGGAGCCCTAATTCTGGTAAATCGGCGAAGATTGAAGAATGTCGGGGGTCACGAACACGCAGCAGGAGGAAGACAAGAAGCCCAACGACCAGTCGGCGCATATCAACCTGAAGGTCAAAGGCCAGGTTGCTTTCTATTCTTTCGAATTTAACTTCATGCTTCAACACTTTCAATCCTGTTTTTCCTTTCATTTGCTTTTTGATCCGTTTTACGTCTTTTTGCCGTCTCATGTTTTCTTTCTCTTTTGGATACCTCGGATAGACACTGGAGACACCCAGTACAAGTTTAAATTATTGGTTGTGAGACACCTAAATAGAAGTATAAATTATAGGTTTTGATGTTCTATTCTTGAATTGGGTTTTGGTTGCTCGCGAATTTTGAAGCCCGAAAAAGGGGAGAATATGGTTAATCGTTCTAAAGTTGGAATTATATTTGATAGGTGCAATAGCTTTATTTTTCAATTATCACAATCGTTCTATAATTTTCCCTCTCAGGATCTAGTAAGTCCAATTAACTGACGGGTGGAATTCTAGTTTCCATTTCTTTGAGTAATATTTGAGATTTGGCATTCAGACTGTTCCATTTTTTCTTTCTGTTTGTTATACTCACCCTGGGAACAAAATCTTGCAGTAGTTCTGTTTTTGTCTTTTGAAAAAGATCTTGAAGCTGCCATGGTGTTGTAAACTACTATCTAAGATGGAGTGTTTGTCCTGCTGCCGTGTCCCAGATAAGCTAGTGATTCTTTGATGTCTTTCTTGTATACTTTTCATTGAGATAGGTTTATCGAGTACCTGCTGGGATATAGCCTTGTTGAGTACTGAGTCTATTAACTACAGATTTTCTTTTTTTTTTAAATATTTTAAATAGCGCCTTTGTTGTGTTTGTTTAGCATGAATACTAAATCATTTGTGGGGTTTCTCTGAATTTTGGGAGTATTCTTTTGTTCATTTTGTTGGAATACATTAGGAAATATCATCTTCTTCTTCCTACTTTTCTTTTTATTATCTTTTAATATTATTTCCAATGAAGTGATGTTGATGTATTTCGAAGATTCAATTATATTTGTTTTAAACCGAGCCTTAGAATGGATATTTCATCGAATCTTTTTCTTGTCTCCTTGCAAACTTTCAGTGACTGAATCAACTTTCCTTTGTGAATCTGTCTCTTTACTCTGTTTTTCTCTGACATGTTTTCACTTCATCTTTTAGTTTTAACGTATCCTTTAAACCTTTCCCTTCTTCATCACGTTCTGCAATTATCATACTTCTTTTTTCCCTTTCTGTTAATTACACCAATTAGTATATTAAAAATAGTGTTCACGGGTGTAAATTTTTTCTTGATCTAGCTTGAGTTTGTGGGAGTAGACTTATTTTTTCTGTATGCCTTAGTAAATTCTTTTTTCTTCTCAGTAAAAGTTCAGTTTCACCCAAAAAAAAGTGTAAGTTTGTCTTTATGGAAGACTAACCCTTTAGACCTCAATATTGATTTTTTTATAGGATGGGAATGAGGTGTTCTTCAGGATTAAAAGAAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGTGATAGACAATCTGTGGATTTGAACTCTATTGCTTTTCTATTTGATGGTCGTCGTCTTCGAGCAGAGCAAACTCCAGATGAGGTAACCCTTTTCTCTGATTTCACTCATAAATGTCCTATTCAAAAGGCCATGCATTTTTCTCTTACAAAACATGTATGTTTACCAGCTAGAAATGGAGGATGGGGATGAGATTGATGCAATGTTGCACCAGACCGGTGGATCGACTCGTTGAAATTCGTGGTGTTGGTTCTGCTCCTTTAACGCCAGTAATTTCATTGAATTGGGAAATGTGGGCATTTAGAGATTCTTGCAGGTTTATTATTAAGTGTAGATTCCTTAAAAAAGACTTCCCTATGTTTTAAGCTATATATTGTGAGGTCAATGGCTATTTTCTGGTCTCAGTTATTCGCTTGGCTCTTTGTATGGATGGAAGCTGTTAGTAGCATAGCCGGAAAGTTAAATACTTTGTAATCAGTCTCGTTTTTTCTTCACGTTGTGAGCTTTCTGATAACGAAATGCTAAGACCATATTGAAATTTGGTATACATTCCTCGGTCTTCCAGTTTTATAGTTATGATCAAATTCATTTGAATGGTGAAATGATCTTGAAATCATAAGGAAATGGAAATGAAATGTTCTGTCGTGGAGAGTTTGTATTATATAAAGACCGACTCGTACATTCGTTTTAACTTTTTTGAATTCAGGGAATATTATGTCAAATTAAATGGTT

Coding sequence (CDS)

ATGTCGGGGGTCACGAACACGCAGCAGGAGGAAGACAAGAAGCCCAACGACCAGTCGGCGCATATCAACCTGAAGGTCAAAGGCCAGGATGGGAATGAGGTGTTCTTCAGGATTAAAAGAAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGTGATAGACAATCTGTGGATTTGAACTCTATTGCTTTTCTATTTGATGGTCGTCGTCTTCGAGCAGAGCAAACTCCAGATGAGCTAGAAATGGAGGATGGGGATGAGATTGATGCAATGTTGCACCAGACCGGTGGATCGACTCGTTGA

Protein sequence

MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR

Homology

[Close]

BLAST of Cucsat.G17895 vs. ExPASy Swiss-Prot
Match: P55852 (Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 5.6e-35
Identity = 85/150 (56.67%), Postives = 88/150 (58.67%), Query Frame = 0


Query: 6   NTQQEEDKKPNDQSAHINLKVKGQVAFYSFEFNFMLQHFQSCFSFHLLFDPFYVFLPSHV 65
           +  QEEDKKP D  AHINLKVKGQ                                    
Sbjct: 2   SANQEEDKKPGDGGAHINLKVKGQ------------------------------------ 61

Query: 66  FFLFWIPRIDTGDTQYKFKLLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 125
                                DGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDG
Sbjct: 62  ---------------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFDG 94

Query: 126 RRLRAEQTPDELEMEDGDEIDAMLHQTGGS 156
           RRLRAEQTPDEL+MEDGDEIDAMLHQTGGS
Sbjct: 122 RRLRAEQTPDELDMEDGDEIDAMLHQTGGS 94

[Close]

BLAST of Cucsat.G17895 vs. ExPASy Swiss-Prot
Match: Q9FLP6 (Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 6.2e-34
Identity = 85/148 (57.43%), Postives = 86/148 (58.11%), Query Frame = 0


Query: 10  EEDKKPNDQSAHINLKVKGQVAFYSFEFNFMLQHFQSCFSFHLLFDPFYVFLPSHVFFLF 69
           EEDKKP DQ AHINLKVKGQ                                        
Sbjct: 6   EEDKKP-DQGAHINLKVKGQ---------------------------------------- 65

Query: 70  WIPRIDTGDTQYKFKLLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLR 129
                            DGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLR
Sbjct: 66  -----------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGRRLR 95

Query: 130 AEQTPDELEMEDGDEIDAMLHQTGGSTR 158
           AEQTPDELEMEDGDEIDAMLHQTGG  +
Sbjct: 126 AEQTPDELEMEDGDEIDAMLHQTGGGAK 95

[Close]

BLAST of Cucsat.G17895 vs. ExPASy Swiss-Prot
Match: P55857 (Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SUMO1 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 9.9e-32
Identity = 67/73 (91.78%), Postives = 69/73 (94.52%), Query Frame = 0


Query: 82  KFKLLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMED 141
           K K  DGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLFDGRRLR EQTPDELEMED
Sbjct: 24  KVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLFDGRRLRGEQTPDELEMED 83

Query: 142 GDEIDAMLHQTGG 155
           GDEIDAMLHQTGG
Sbjct: 84  GDEIDAMLHQTGG 96

[Close]

BLAST of Cucsat.G17895 vs. ExPASy Swiss-Prot
Match: O13351 (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pmt3 PE=1 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 4.8e-18
Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 0


Query: 87  DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEID 146
           D NEVFF+IK++T+  KLM  YC RQ   +NS+ FL DG R+R +QTP EL+MEDGD+I+
Sbjct: 44  DNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRFLVDGERIRPDQTPAELDMEDGDQIE 103

Query: 147 AMLHQTGGST 157
           A+L Q GG T
Sbjct: 104 AVLEQLGGCT 113

[Close]

BLAST of Cucsat.G17895 vs. ExPASy Swiss-Prot
Match: Q9FLP5 (Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.0e-15
Identity = 39/73 (53.42%), Postives = 52/73 (71.23%), Query Frame = 0


Query: 82  KFKLLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMED 141
           K K  DG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+   +TPDEL+MED
Sbjct: 21  KVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNGARIGGLETPDELDMED 80

Query: 142 GDEIDAMLHQTGG 155
           GD IDA    +GG
Sbjct: 81  GDVIDACRAMSGG 93

[Close]

BLAST of Cucsat.G17895 vs. NCBI nr
Match: KAF9669561.1 (hypothetical protein SADUNF_Sadunf14G0120400 [Salix dunnii])

HSP 1 Score: 183 bits (464), Expect = 6.72e-56
Identity = 107/169 (63.31%), Postives = 119/169 (70.41%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQVAFYS-----FEFNFMLQHFQSCFSFHLLF- 60
           MSGVT   QEEDKKPNDQSAHINLKVKGQV  +S     FE    +  F  C+ F  LF 
Sbjct: 1   MSGVTGQPQEEDKKPNDQSAHINLKVKGQVLGFSSALRLFEAECFVWGF--CYLFIYLFI 60

Query: 61  --DPFYVFLPSHVFFLFWIPRIDTGDTQ----YKFKLLDGNEVFFRIKRSTQLKKLMNAY 120
             D  +VF P     L W+ R+     +      +K  DGNEVFFRIKRSTQLKKLMNAY
Sbjct: 61  VLDCLFVFRPFATAKLIWVYRLGNFVAEPFKMLNYKFQDGNEVFFRIKRSTQLKKLMNAY 120

Query: 121 CDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 157
           CDRQSV+ NSIAFLFDGRRLR EQTPDEL+MEDGDEIDAMLHQTGG+ +
Sbjct: 121 CDRQSVEFNSIAFLFDGRRLRGEQTPDELDMEDGDEIDAMLHQTGGAMK 167

[Close]

BLAST of Cucsat.G17895 vs. NCBI nr
Match: XP_004150752.1 (small ubiquitin-related modifier 1 [Cucumis sativus] >XP_038902909.1 small ubiquitin-related modifier 1-like [Benincasa hispida] >KGN46994.1 hypothetical protein Csa_020805 [Cucumis sativus])

HSP 1 Score: 174 bits (441), Expect = 2.29e-53
Identity = 100/157 (63.69%), Postives = 100/157 (63.69%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQVAFYSFEFNFMLQHFQSCFSFHLLFDPFYVF 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQ                               
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQ------------------------------- 60

Query: 61  LPSHVFFLFWIPRIDTGDTQYKFKLLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA 120
                                     DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA
Sbjct: 61  --------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA 100

Query: 121 FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 157
           FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR
Sbjct: 121 FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 100

[Close]

BLAST of Cucsat.G17895 vs. NCBI nr
Match: XP_008456407.1 (PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KAA0054458.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa] >TYK14581.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa])

HSP 1 Score: 172 bits (437), Expect = 9.29e-53
Identity = 99/157 (63.06%), Postives = 100/157 (63.69%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQVAFYSFEFNFMLQHFQSCFSFHLLFDPFYVF 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQ                               
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQ------------------------------- 60

Query: 61  LPSHVFFLFWIPRIDTGDTQYKFKLLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA 120
                                     DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA
Sbjct: 61  --------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA 100

Query: 121 FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 157
           FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+R
Sbjct: 121 FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR 100

[Close]

BLAST of Cucsat.G17895 vs. NCBI nr
Match: XP_022943304.1 (small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022944672.1 small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022986048.1 small ubiquitin-related modifier 1 [Cucurbita maxima] >XP_023512038.1 small ubiquitin-related modifier 1 [Cucurbita pepo subsp. pepo] >XP_023513384.1 small ubiquitin-related modifier 1 [Cucurbita pepo subsp. pepo] >KAG6570547.1 Small ubiquitin-related modifier 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010405.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma] >KAG7010406.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 171 bits (432), Expect = 5.36e-52
Identity = 98/156 (62.82%), Postives = 99/156 (63.46%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQVAFYSFEFNFMLQHFQSCFSFHLLFDPFYVF 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQ                               
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQ------------------------------- 60

Query: 61  LPSHVFFLFWIPRIDTGDTQYKFKLLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA 120
                                     DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA
Sbjct: 61  --------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA 99

Query: 121 FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 156
           FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 121 FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]

BLAST of Cucsat.G17895 vs. NCBI nr
Match: XP_022970791.1 (small ubiquitin-related modifier 1-like [Cucurbita maxima] >XP_023533825.1 small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo] >KAG6604755.1 Small ubiquitin-related modifier 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034883.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 170 bits (431), Expect = 9.77e-52
Identity = 98/156 (62.82%), Postives = 98/156 (62.82%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQVAFYSFEFNFMLQHFQSCFSFHLLFDPFYVF 60
           MSGV NTQQEEDKKPNDQSAHINLKVKGQ                               
Sbjct: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQ------------------------------- 60

Query: 61  LPSHVFFLFWIPRIDTGDTQYKFKLLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA 120
                                     DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA
Sbjct: 61  --------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA 99

Query: 121 FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 156
           FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
Sbjct: 121 FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 99

[Close]

BLAST of Cucsat.G17895 vs. ExPASy TrEMBL
Match: A0A0A0KDV8 (Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_6G157680 PE=3 SV=1)

HSP 1 Score: 174 bits (441), Expect = 1.11e-53
Identity = 100/157 (63.69%), Postives = 100/157 (63.69%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQVAFYSFEFNFMLQHFQSCFSFHLLFDPFYVF 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQ                               
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQ------------------------------- 60

Query: 61  LPSHVFFLFWIPRIDTGDTQYKFKLLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA 120
                                     DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA
Sbjct: 61  --------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA 100

Query: 121 FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 157
           FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR
Sbjct: 121 FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 100

[Close]

BLAST of Cucsat.G17895 vs. ExPASy TrEMBL
Match: A0A5A7UHK7 (Small ubiquitin-related modifier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00760 PE=3 SV=1)

HSP 1 Score: 172 bits (437), Expect = 4.50e-53
Identity = 99/157 (63.06%), Postives = 100/157 (63.69%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQVAFYSFEFNFMLQHFQSCFSFHLLFDPFYVF 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQ                               
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQ------------------------------- 60

Query: 61  LPSHVFFLFWIPRIDTGDTQYKFKLLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA 120
                                     DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA
Sbjct: 61  --------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA 100

Query: 121 FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 157
           FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+R
Sbjct: 121 FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR 100

[Close]

BLAST of Cucsat.G17895 vs. ExPASy TrEMBL
Match: A0A1S3C3V0 (Small ubiquitin-related modifier OS=Cucumis melo OX=3656 GN=LOC103496358 PE=3 SV=1)

HSP 1 Score: 172 bits (437), Expect = 4.50e-53
Identity = 99/157 (63.06%), Postives = 100/157 (63.69%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQVAFYSFEFNFMLQHFQSCFSFHLLFDPFYVF 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQ                               
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQ------------------------------- 60

Query: 61  LPSHVFFLFWIPRIDTGDTQYKFKLLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA 120
                                     DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA
Sbjct: 61  --------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA 100

Query: 121 FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTR 157
           FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+R
Sbjct: 121 FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSR 100

[Close]

BLAST of Cucsat.G17895 vs. ExPASy TrEMBL
Match: A0A6J1FTW7 (Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 PE=3 SV=1)

HSP 1 Score: 171 bits (432), Expect = 2.60e-52
Identity = 98/156 (62.82%), Postives = 99/156 (63.46%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQVAFYSFEFNFMLQHFQSCFSFHLLFDPFYVF 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQ                               
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQ------------------------------- 60

Query: 61  LPSHVFFLFWIPRIDTGDTQYKFKLLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA 120
                                     DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA
Sbjct: 61  --------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA 99

Query: 121 FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 156
           FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 121 FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]

BLAST of Cucsat.G17895 vs. ExPASy TrEMBL
Match: A0A6J1JFC9 (Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483904 PE=3 SV=1)

HSP 1 Score: 171 bits (432), Expect = 2.60e-52
Identity = 98/156 (62.82%), Postives = 99/156 (63.46%), Query Frame = 0


Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQVAFYSFEFNFMLQHFQSCFSFHLLFDPFYVF 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQ                               
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQ------------------------------- 60

Query: 61  LPSHVFFLFWIPRIDTGDTQYKFKLLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA 120
                                     DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA
Sbjct: 61  --------------------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA 99

Query: 121 FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 156
           FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 121 FLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

The following BLAST results are available for this feature:

BLAST of Cucsat.G17895 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P55852	5.6e-35	56.67	Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1...	[more]
Q9FLP6	6.2e-34	57.43	Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1...	[more]
P55857	9.9e-32	91.78	Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
O13351	4.8e-18	58.57	Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
Q9FLP5	5.0e-15	53.42	Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1...	[more]

BLAST of Cucsat.G17895 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF9669561.1	6.72e-56	63.31	hypothetical protein SADUNF_Sadunf14G0120400 [Salix dunnii]	[more]
XP_004150752.1	2.29e-53	63.69	small ubiquitin-related modifier 1 [Cucumis sativus] >XP_038902909.1 small ubiqu...	[more]
XP_008456407.1	9.29e-53	63.06	PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KAA0054458.1 small...	[more]
XP_022943304.1	5.36e-52	62.82	small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022944672.1 small ub...	[more]
XP_022970791.1	9.77e-52	62.82	small ubiquitin-related modifier 1-like [Cucurbita maxima] >XP_023533825.1 small...	[more]

BLAST of Cucsat.G17895 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDV8	1.11e-53	63.69	Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_6G157680 PE=3...	[more]
A0A5A7UHK7	4.50e-53	63.06	Small ubiquitin-related modifier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C3V0	4.50e-53	63.06	Small ubiquitin-related modifier OS=Cucumis melo OX=3656 GN=LOC103496358 PE=3 SV...	[more]
A0A6J1FTW7	2.60e-52	62.82	Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 P...	[more]
A0A6J1JFC9	2.60e-52	62.82	Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483904 PE=...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 22..93 e-value: 2.5E-14 score: 63.6
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 20..97 score: 15.906139
IPR022617	Rad60/SUMO-like domain	PFAM	PF11976	Rad60-SLD	coord: 22..92 e-value: 5.3E-25 score: 87.0
None	No IPR available	GENE3D	3.10.20.90		coord: 1..97 e-value: 4.7E-41 score: 141.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR10562:SF87	SMALL UBIQUITIN-RELATED MODIFIER	coord: 5..98
None	No IPR available	PANTHER	PTHR10562	SMALL UBIQUITIN-RELATED MODIFIER	coord: 5..98
None	No IPR available	CDD	cd16116	Ubl_Smt3_like	coord: 20..93 e-value: 8.1392E-48 score: 145.064
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 10..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G17895.T1	Cucsat.G17895.T1	mRNA
Cucsat.G17895.T4	Cucsat.G17895.T4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016925	protein sumoylation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005622	intracellular anatomical structure
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0031386	protein tag
molecular_function	GO:0044389	ubiquitin-like protein ligase binding