Cucsat.G17425 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G17425
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	U4/U6 small nuclear ribonucleoprotein PRP4-like protein
Location	ctg27: 2015517 .. 2020809 (-)
RNA-Seq Expression	Cucsat.G17425
Synteny	Cucsat.G17425

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTAACACACGATGATACACTTATTAGTTAAAAGTTGTAATTTAATAATAATGTATGAATAGGTTTTGTAATTATTTTTTACGAAATGATAAACAGAAGGTTTTAAAAAAGAAAAATCTGAAAAGGATTTAGAAAATAAAATATAGGCCAGATATGAAATAGAAATTGTTTGGAAAGAAAAAAATAGTTTTTTTAAATTTAATTTTTTAAAAAATAAAAAGTATTTTTTGTGATATTATGTGAAAGCTATAATTAGAAAATAGGGTGTGACATAACTAAACATTCTTTGATCTCCATACTTATACTTATAGATGTAGCACTCAAAGAAAATTGTAAAAATCTAGTTCATTTTTTTAAAAAATACTTCTAAAAAGAGATTACAAATTAAAGAAATGAATTATTTGTAATTAACGTTTAAACACCCAATTTAAAAAATATATATAAAGGTAGACTTAGACATAGACTACTATTTGTTTGAGTCATATTGTAATTTATATATTTGAGAAAAGTCCGTAAAAAATTATACTTAAAATTAAAAAAAGAAAAACCTAGGTAAGGCCTTACCCGCTCTTTTACTTCCTCACTCTCGGAGAGACTATCCTTTCTTCACGCCGGTTCCCTCCCTTACGCACCTCCTTGCCACCGCCGCCGTTGGTATAGTCTCTCTTCCCGCTTTGTCCGTCTTCTACCAGTTTTTTACTGCTATACATTTGGCACTCCCGTCATCCCTTGTCCGGTTCAAAGTTCACCTGTGCACGAGGGCAATACTGTATCATCTCCGTCAACTGGAAATGTTTTGACGGTACGCATCCCTTGCTAGATCCGAATCTCCCTCCATTTCTCTTTCTCTTTCTCTTTCTCCGGTAACTTTAGTTATTTCACTCATCTATTTCTCTATTGATTGGCCTTTTCTGGTGCTGTAACAGTGATGGTTCTTTTTTTTCCTGGTTCGTGTTATTACTGCACTGTGAACATGATGGGAGAAATTATTGTTTATGTAACTACGAGAGTCTCCAAAGTGTGTATTGCAGTGTCGTGTTTAGAGAAGAAAAGGGATTTTGTTTCTATTTTCTTGAACTGTATCTTTCTTCAAATGTCTGTCCGATAATCTGTTATAGGATCGGCGCAGCCTCAGAATGTTACTTACTGTTTGAATTTCTTGAATTGTATCTTTCTTCAAATGGTTTGATTTTTTTTTCCCCCTTTACTTTTGAAGGTCTCCTGTTAACAGTGAAATTCTCGTTTTACTATTAGTGTTAGACTTTGTTTCTCATTTGTGTTATGTTAACTAATTTTTGGGAGCTTGATTGTAGAGAAGAAATGAAAAGAGGAGCTTAATATCTAGGATAAGCTTGTGTTGATTAGAAGCTTCATTTCCGAGCAAGCTATAATGGAAATTGATGATCAAAACCCATCAACTGCTGCGGAATCTCCTGAAACCCTTCCTGGTGGTGAAAATGAGGAACTTGATAATCCAGCCGAACCAACTCAACCTGCAGCTACATCAGTTATTCCACCTTCAATTGTCCCTGCCATTGCTCCTATCCCCCCTCCAATTATCCGTCCATTGGCTCCTCTTCCGAGCCGACCTCCCCTCTTTAGGCCCCCTGTAACACAAAATGGTGAGCTGAGAACAAGTGACTCAGACTCGGAACATGATGAATTGGCTCCTTCCCGAACAGCTCCAGGTTCAACTGCAGAGTATGAAATCTCAGAAGAGAGCAGGCAAGCTAGGGAGCGTCATGAAAAAGCCATGCAGGAATTTTTGATGAAGCGTCGTGCTTCTGCTCTAGCAGTGCCTACTAATGACATGGCTGTTCGAGCTCGTCTTCGACGTCTTGGTGAGCCCATAACTCTTTTTGGAGAAAGAGAAATGGAAAGACGGGACAGGTTGCGGTCGATAATGGCACGATTGGATGCTGAAGGGCAGTTAGAGAAGCTCATGAAAGTTCACGAGGAAGAGGAGGCTGCAGCTACTGGTGGAACTGAGGAGGCTGAGGAGGAAGTGCTTCAGTATCCCTTTTATACTGAGGGGTCCAAAGCTCTCTTGGATGCAAGAATTGATATTGCAAAGTATTCCATCCTAAGAGCATCTTCACGCCTGGAGCGTGCAAAGAGGAAACGGGATGACCCAGATGAAGATGTGGAAGCGGAAATGGATTGGGCTCTGAGACAGGCTGAAAGTTTGGTCCTGGACTGTAGTGAGATAGGAGATGATCGACCACTTTCTGGTTGTTCTTTCTCGTCTGATGGAAAATTTCTTGCCACTAGGTATCTTCTCACTTTGCAGTTAATGATTTTTAGCTACTGTACCAGTTTCCCCTTTTTAATATCCATCCCCATTTCGCCTCTTGGTAGAAGGGGGAAAAACGAAAAAAGAAAATATAATAGATCTTTCTGGCTATAGATTAGCTATTATCTTCCTACTTAGCTAAACTTCCTCAGTTGAACACGAAACCAAAGATAATATAGAAATTAATGTTTTTCCATTTTTCATTCCAGTACGTGATAAGCTTTACAGGCTTTGTATTTAGCTTTCATTTGCTACTGGCTTTGCATTTGATGGTTTCTGTATTTTTTTTTCTTGTTTCATTTCTATAGTTCACTGAGTGGAGTTGCAAAGTTGTGGAGCATGCCTCAAGTAAGGAAGGTTTCCAACTTTAAGGGACACACAGAGCGTGTTACTGATGTAATGTTTTCTCCAGTGAACGAGTGTTTAGCAACTGCCTCTGCTGACCGAACTGCAAGGTTGTGGTCTGCGGAAGGATCTCTACTTAAAACATTTGAGGGCCATCTAGACCGCCTTGCACGAATTGCCTTCCACCCGTCGGGCAAGTACTTGGGCACAACTAGCTTTGACAAGACCTGGAGATTATGGGATGTTGAAACTGGTGTAGAATTACTTCTTCAAGAAGGTCACAGTAGAAGTGTCTATGGGATAGCCTTCCACCATGATGGATCCTTGGTATCATCTTGTGGACTTGATGCGCTTGCTCGCGTTTGGGATCTTCGAACTGGTAGAAGTGTTCTTGCCTTGGAAGGCCACGTCAAGCCAGTAAAGCTCTCTCCTTTCTTTCGATGGGATTGTAGAACATTTGCTTTTTTAATAAATTGGCTTGTTTGCTTCTCACTGATTCCTTGTCATATGTCTATGATGTTATAACCAGGTCCTTGGAGTTAGTTTTTCACCCAACGGTTATCATTTAGCTACTGGTGGAGAAGATAACACTTGTCGAATATGGGATTTAAGGAAGAAAAAATCTCTTTACATAATACCTGCACATTCAAACTTAGTTTCACAGGTGAAATATGAACCTCAGGAGGGATATTTCTTGGTTACTGCATCATTTGATATGACAGCAAAGGTAATCTTGAATACTGCCAGGATGATATAATATTGTTCAATTCTTAATATTTTCATTTGATTGTTGCTTAATCTCACTTGTTGTCTAAGGTTTCACTATCATATGCTCAACTTTTTTTTTCTGCAGATTTGGTCTGCTCGAGATTTTAAGCCTGTGAAGACACTCTCTGGTCACGAAGCAAAAGTTACATCTTTGGATATAATTTCAGGTTAGTTATATAACAACTCCTAGGTCATTTACTATTATTGCGTTGTTTACACAGATTGCCACCTAAAGATTTGTAATTTTCACCGGTAATTAGCCTTATTTAGGCACAATCTCAGATTGAACTAATTAACAAAAATATCTTTCTGAGGTGGAACCATATTATGTCATTGATGAGCTGGAATTCGGGATCCTATTTTATTAGCTCTAGTGGTGAAAATGGACAGCTTTTTCTTGGTCTAAAATTAAGTGCTCTTTCAAACATTATAGGTTATCGATTTTAGTTACTGGTTCACGATCTCTTCTTTGATCACCTTTAGATTCTTGAGATATCCTCCTTATTTCATTTTGAAATATTCCTTTTACACAAAAAAAAAAAGAGGTTTCAGACCTTCGGTGGCGGGCGATGGCCATGTTAGCTCCAGTGAGAGAGAGCAAACGAGTGAGAGAGAAAGGGGACTAACCAATGAGTGGTACAACCAGTAGGGAAGGGGGAACTAAAACCAACTAGTGATGGAGAGAAGGGGAAGAAGTACCTTTTGGTTTTATTGGGAGAAGTGTTGAGCTCGAGTGAGAGGGAGATAAACAAAATGGTTGTTGATTGAAGTCTCATCTCTGCAATTTATGAAAGAGAGAAAAAAGGAAAGAAAGAATGACTTGAAGTCTTTAACCTTCAAAAAATTGTGTGTGTCTATATATATAGATAGATAGGTATATGAGATTGATTCAGTTCAGGTTGAATCAAAGTTCTTTTCAAGTATGCCCAATTCTTTTGTTTATTTTTGTGATCTTGTACAATTCACAGCGGAGTAACCAACCCAAGTTCTAATTACTCAACTTTTTTCATCAACATAGATTGGAAGGTTTATATTGAGAGAAGTGAATGAATATAGGAGGGAATTAGAAAAAACGTGCAACAGAAAGAGGGGATCAGACTAACTACGTGGACTCCAGTCCAAATGAACAAGACCTAGGTCATAAGTACAAAAAGAACTACTGATTGACGCCCACAAGGACATGTTAGGCCGTTCAAGAGATTTTACTGTAGCTTAGCTTTTTCCTTCGTTGTTTGGTGGCCTCTTCTTTGGCTACCTGTTGGGTGTTCTCACTTTAGAAGGTTAAAAATTCTAAAAAAGGTAAATCTTTTTGTGGTGAATTCTTAAAAGTAGTGCCAGTATGGTTGGACTATACCAGGGGAAGGGGATCTAGAACACCTTTAGGGTGGTGTTCCTATGGCTTAGAACAAATTCTTTTTCCCGGATGATGGATGTTAGTTCAATCCAAGGTTGTTAAATGATCTTTTGGGCACTGGAAAGTATTTCAGTAATCTTTGATATACGGTGTTGGTTTTTTCTCTAATCTTCACCCTTGCTGTAATATTTCAGCCCATTATTGTTTATGTGAAATTTCAAATAAGACCAACTCAACCAGAATATGGTTAAGGATTTAGGAAATTATTAAAGGATACTGGACTGTTTTTGTGACAAGTAAAACGTTGGAAGGTGTTTGAATGTAATTTGCTTGTCTTTAAGGACACAACCATAAAAGTTATCAACAGTTTTTCTTTGGTTTTAATATGAATGGTTACTGATACATCTTTAACACTAAGCTCTAAGTTTGTGCATTGTATGCTTAAAATACTTTTTGGAGCTTTATTCTGCATATATGTTTCTGATACCCTGATATTGTTCTTGTCAATAACAGACGGACAGTGTATTGCAACCGTCTCACATGATCGGACCATAAAGCTCTGGTCTGTTAATAGTAAAGACATTCAGACTATGGACGTTGATTGACTTTTCATAGTACCAACATGGGAGATGTTTCACGACCTTACTTGATCAGGGTTCTGTTCTATAAATTGTTCGTCTCGTCCTTGAGTACTAAAGAGGCATGAGAGATGTTTCGAAACTTTGTGGCCTCAGGTGATAAAGAGCTTGGATCAGATGATCTCTGTAACATCATGTATCTGATTGAAATTTTTTAGGGAAAACCCCTGTACTTTTTTTTTCCTTGAAGAGAAATGGAAGGATTATATCAATGGAGGACATAGAGAAAAAGGGAGATTGGGATATTTCCCGCATGTTGAGATTAAAAATGCACTAAAATTAGAGGTAAGAATTGATAAGTAAATTACATGTAGTTTTCTTTAGATTTCCTTTTGGTTAGAAATGGTTTGTGCACCGACTACCATAGTGATTATTCGGTTAAAATACAATTTCAGGTAAGCCTAATTGGACCAATTAGACTCTAACCAAAACTATAAATTTATCAATTGCTTTTCCGTCTTAATCTCTGT

Coding sequence (CDS)

ATGGAAATTGATGATCAAAACCCATCAACTGCTGCGGAATCTCCTGAAACCCTTCCTGGTGGTGAAAATGAGGAACTTGATAATCCAGCCGAACCAACTCAACCTGCAGCTACATCAGTTATTCCACCTTCAATTGTCCCTGCCATTGCTCCTATCCCCCCTCCAATTATCCGTCCATTGGCTCCTCTTCCGAGCCGACCTCCCCTCTTTAGGCCCCCTGTAACACAAAATGGTGAGCTGAGAACAAGTGACTCAGACTCGGAACATGATGAATTGGCTCCTTCCCGAACAGCTCCAGGTTCAACTGCAGAGTATGAAATCTCAGAAGAGAGCAGGCAAGCTAGGGAGCGTCATGAAAAAGCCATGCAGGAATTTTTGATGAAGCGTCGTGCTTCTGCTCTAGCAGTGCCTACTAATGACATGGCTGTTCGAGCTCGTCTTCGACGTCTTGGTGAGCCCATAACTCTTTTTGGAGAAAGAGAAATGGAAAGACGGGACAGGTTGCGGTCGATAATGGCACGATTGGATGCTGAAGGGCAGTTAGAGAAGCTCATGAAAGTTCACGAGGAAGAGGAGGCTGCAGCTACTGGTGGAACTGAGGAGGCTGAGGAGGAAGTGCTTCAGTATCCCTTTTATACTGAGGGGTCCAAAGCTCTCTTGGATGCAAGAATTGATATTGCAAAGTATTCCATCCTAAGAGCATCTTCACGCCTGGAGCGTGCAAAGAGGAAACGGGATGACCCAGATGAAGATGTGGAAGCGGAAATGGATTGGGCTCTGAGACAGGCTGAAAGTTTGGTCCTGGACTGTAGTGAGATAGGAGATGATCGACCACTTTCTGGTTGTTCTTTCTCGTCTGATGGAAAATTTCTTGCCACTAGTTCACTGAGTGGAGTTGCAAAGTTGTGGAGCATGCCTCAAGTAAGGAAGGTTTCCAACTTTAAGGGACACACAGAGCGTGTTACTGATGTAATGTTTTCTCCAGTGAACGAGTGTTTAGCAACTGCCTCTGCTGACCGAACTGCAAGGTTGTGGTCTGCGGAAGGATCTCTACTTAAAACATTTGAGGGCCATCTAGACCGCCTTGCACGAATTGCCTTCCACCCGTCGGGCAAGTACTTGGGCACAACTAGCTTTGACAAGACCTGGAGATTATGGGATGTTGAAACTGGTGTAGAATTACTTCTTCAAGAAGGTCACAGTAGAAGTGTCTATGGGATAGCCTTCCACCATGATGGATCCTTGGTATCATCTTGTGGACTTGATGCGCTTGCTCGCGTTTGGGATCTTCGAACTGGTAGAAGTGTTCTTGCCTTGGAAGGCCACGTCAAGCCAGTCCTTGGAGTTAGTTTTTCACCCAACGGTTATCATTTAGCTACTGGTGGAGAAGATAACACTTGTCGAATATGGGATTTAAGGAAGAAAAAATCTCTTTACATAATACCTGCACATTCAAACTTAGTTTCACAGGTGAAATATGAACCTCAGGAGGGATATTTCTTGGTTACTGCATCATTTGATATGACAGCAAAGATTTGGTCTGCTCGAGATTTTAAGCCTGTGAAGACACTCTCTGGTCACGAAGCAAAAGTTACATCTTTGGATATAATTTCAGACGGACAGTGTATTGCAACCGTCTCACATGATCGGACCATAAAGCTCTGGTCTGTTAATAGTAAAGACATTCAGACTATGGACGTTGATTGA

Protein sequence

MEIDDQNPSTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRPLAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWSVNSKDIQTMDVD

Homology

[Close]

BLAST of Cucsat.G17425 vs. ExPASy Swiss-Prot
Match: O22212 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana OX=3702 GN=LIS PE=2 SV=1)

HSP 1 Score: 708.8 bits (1828), Expect = 5.1e-203
Identity = 367/570 (64.39%), Postives = 440/570 (77.19%), Query Frame = 0


Query: 5   DQNPSTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRPLAPLP 64
           D N S AA +  + P       D  + P   A   V+PPS  P +APIP   + P  P+ 
Sbjct: 6   DDNVSLAATAQISAPPVLQ---DASSLPGFSAIPPVVPPSFPPPMAPIP---MMPHPPV- 65

Query: 65  SRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHEKAMQE 124
           +RPP FRPPV+QNG ++TSDSDSE D+              EISEES+Q RER EKA+Q+
Sbjct: 66  ARPPTFRPPVSQNGGVKTSDSDSESDD-----------EHIEISEESKQVRERQEKALQD 125

Query: 125 FLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEGQLEKL 184
            L+KRRA+A+AVPTND AVR RLRRLGEPITLFGE+EMERR RL  ++ R D  GQL+KL
Sbjct: 126 LLVKRRAAAMAVPTNDKAVRDRLRRLGEPITLFGEQEMERRARLTQLLTRYDINGQLDKL 185

Query: 185 MKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLERAKRK 244
           +K HEE+        EE ++EVL+YPF+TEG K L +ARI+IAK+S+ RA+ R++RAKR+
Sbjct: 186 VKDHEEDVTP----KEEVDDEVLEYPFFTEGPKELREARIEIAKFSVKRAAVRIQRAKRR 245

Query: 245 RDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGVAKLWS 304
           RDDPDED++AE  WAL+ A+ + LDCS  GDDRPL+GCSFS DGK LAT SLSGV KLW 
Sbjct: 246 RDDPDEDMDAETKWALKHAKHMALDCSNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWE 305

Query: 305 MPQV-RKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHLDRLA 364
           MPQV   ++  K H ER TDV+FSPV++CLATASADRTA+LW  +G+LL+TFEGHLDRLA
Sbjct: 306 MPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTFEGHLDRLA 365

Query: 365 RIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSCGLDA 424
           R+AFHPSGKYLGTTS+DKTWRLWD+ TG ELLLQEGHSRSVYGIAF  DG+L +SCGLD+
Sbjct: 366 RVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDS 425

Query: 425 LARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLYIIPA 484
           LARVWDLRTGRS+L  +GH+KPV  V+FSPNGYHLA+GGEDN CRIWDLR +KSLYIIPA
Sbjct: 426 LARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPA 485

Query: 485 HSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISDGQCI 544
           H+NLVSQVKYEPQEGYFL TAS+DM   IWS RDF  VK+L+GHE+KV SLDI +D  CI
Sbjct: 486 HANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCI 545

Query: 545 ATVSHDRTIKLWSVNSKD-----IQTMDVD 569
           ATVSHDRTIKLW+ +  D      +TMD+D
Sbjct: 546 ATVSHDRTIKLWTSSGNDDEDEEKETMDID 553

[Close]

BLAST of Cucsat.G17425 vs. ExPASy Swiss-Prot
Match: Q3MHE2 (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus OX=9913 GN=PRPF4 PE=2 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.5e-114
Identity = 215/459 (46.84%), Postives = 297/459 (64.71%), Query Frame = 0


Query: 106 EISEESRQARERHEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 165
           E+ E      ER  + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 166 DRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARID 225
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EG  +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPHSLKVARLW 189

Query: 226 IAKYSILRASSRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFS 285
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 286 SDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNEC--------LATAS 345
            + K LAT+  SG+ KLWS+P    +   +GH   V  ++F P +          LA+ +
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA 309

Query: 346 ADRTARLWSAEG-SLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLL 405
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 310 ADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 369

Query: 406 QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 465
           QEGHS  VY IAFH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G++FSPNGY
Sbjct: 370 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 429

Query: 466 HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 525
           H+ATG  DNTC++WDLR+++ +Y IPAH NLV+ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 430 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP 489

Query: 526 DFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLW 556
            + P+KTL+GHE KV  LDI SDGQ IAT S+DRT KLW
Sbjct: 490 GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518

[Close]

BLAST of Cucsat.G17425 vs. ExPASy Swiss-Prot
Match: O43172 (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens OX=9606 GN=PRPF4 PE=1 SV=2)

HSP 1 Score: 414.8 bits (1065), Expect = 1.5e-114
Identity = 215/459 (46.84%), Postives = 297/459 (64.71%), Query Frame = 0


Query: 106 EISEESRQARERHEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 165
           E+ E      ER  + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 71  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 130

Query: 166 DRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARID 225
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EG  +L  AR+ 
Sbjct: 131 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPNSLKVARLW 190

Query: 226 IAKYSILRASSRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFS 285
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 191 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 250

Query: 286 SDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNEC--------LATAS 345
            + K LAT+  SG+ KLWS+P    +   +GH   V  ++F P +          LA+ +
Sbjct: 251 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCA 310

Query: 346 ADRTARLWSAEG-SLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLL 405
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 311 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 370

Query: 406 QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 465
           QEGHS  VY IAFH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G++FSPNGY
Sbjct: 371 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 430

Query: 466 HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 525
           H+ATG  DNTC++WDLR+++ +Y IPAH NLV+ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 431 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP 490

Query: 526 DFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLW 556
            + P+KTL+GHE KV  LDI SDGQ IAT S+DRT KLW
Sbjct: 491 GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 519

[Close]

BLAST of Cucsat.G17425 vs. ExPASy Swiss-Prot
Match: Q5NVD0 (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii OX=9601 GN=PRPF4 PE=2 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.5e-114
Identity = 215/459 (46.84%), Postives = 297/459 (64.71%), Query Frame = 0


Query: 106 EISEESRQARERHEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 165
           E+ E      ER  + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 166 DRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARID 225
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EG  +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPNSLKVARLW 189

Query: 226 IAKYSILRASSRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFS 285
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRASQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 286 SDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNEC--------LATAS 345
            + K LAT+  SG+ KLWS+P    +   +GH   V  ++F P +          LA+ +
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA 309

Query: 346 ADRTARLWSAEG-SLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLL 405
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 310 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 369

Query: 406 QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 465
           QEGHS  VY IAFH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G++FSPNGY
Sbjct: 370 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 429

Query: 466 HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 525
           H+ATG  DNTC++WDLR+++ +Y IPAH NLV+ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 430 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP 489

Query: 526 DFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLW 556
            + P+KTL+GHE KV  LDI SDGQ IAT S+DRT KLW
Sbjct: 490 GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518

[Close]

BLAST of Cucsat.G17425 vs. ExPASy Swiss-Prot
Match: Q9DAW6 (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus OX=10090 GN=Prpf4 PE=1 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 2.6e-114
Identity = 215/459 (46.84%), Postives = 297/459 (64.71%), Query Frame = 0


Query: 106 EISEESRQARERHEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 165
           E+ E      ER  + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 166 DRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARID 225
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EG  +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPNSLKVARLW 189

Query: 226 IAKYSILRASSRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFS 285
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 286 SDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNEC--------LATAS 345
            + K LAT+  SG+ KLWS+P    +   +GH   V  ++F P +          LA+ +
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA 309

Query: 346 ADRTARLWSAEG-SLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLL 405
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 310 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 369

Query: 406 QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 465
           QEGHS  VY IAFH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G++FSPNGY
Sbjct: 370 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 429

Query: 466 HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 525
           H+ATG  DNTC++WDLR+++ +Y IPAH NLV+ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 430 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHP 489

Query: 526 DFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLW 556
            + P+KTL+GHE KV  LDI SDGQ IAT S+DRT KLW
Sbjct: 490 GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518

[Close]

BLAST of Cucsat.G17425 vs. NCBI nr
Match: XP_004146749.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis sativus] >XP_031742738.1 U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis sativus] >KGN47802.1 hypothetical protein Csa_003570 [Cucumis sativus])

HSP 1 Score: 1096 bits (2835), Expect = 0.0
Identity = 568/569 (99.82%), Postives = 568/569 (99.82%), Query Frame = 0


Query: 1   MEIDDQNP-STAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60
           MEIDDQNP STAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHE 120
           LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHE
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
           RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 GQCIATVSHDRTIKLWSVNSKDIQTMDVD 568
           GQCIATVSHDRTIKLWSVNSKDIQTMDVD
Sbjct: 541 GQCIATVSHDRTIKLWSVNSKDIQTMDVD 569

[Close]

BLAST of Cucsat.G17425 vs. NCBI nr
Match: XP_008464716.1 (PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo] >XP_016903247.1 PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo] >XP_016903248.1 PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo] >XP_016903249.1 PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo])

HSP 1 Score: 1087 bits (2811), Expect = 0.0
Identity = 563/569 (98.95%), Postives = 565/569 (99.30%), Query Frame = 0


Query: 1   MEIDDQNP-STAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60
           MEIDDQNP STAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHE 120
           LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAP+RTAPGSTAEYEISEESRQARERHE
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPARTAPGSTAEYEISEESRQARERHE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
           RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWS EGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSPEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFH DGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHQDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 GQCIATVSHDRTIKLWSVNSKDIQTMDVD 568
           GQCIATVSHDRTIKLWSVNSKD QTMD+D
Sbjct: 541 GQCIATVSHDRTIKLWSVNSKDKQTMDID 569

[Close]

BLAST of Cucsat.G17425 vs. NCBI nr
Match: XP_038885479.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Benincasa hispida] >XP_038885480.1 U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Benincasa hispida])

HSP 1 Score: 1070 bits (2768), Expect = 0.0
Identity = 552/569 (97.01%), Postives = 561/569 (98.59%), Query Frame = 0


Query: 1   MEIDDQNP-STAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60
           ME+DDQNP STAAESPETLPGGENE+LDNPAEP QPAATSVIPPS+VP+IAPIPPPIIRP
Sbjct: 1   MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSVVPSIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHE 120
           LAPLPSRPP FRPPVTQNGE+RTSDSDSEHDELAPSRTA GSTAEYE+SEESRQ RER E
Sbjct: 61  LAPLPSRPPHFRPPVTQNGEMRTSDSDSEHDELAPSRTAGGSTAEYEVSEESRQVRERQE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRA+SRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 240

Query: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
           RAKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDV+FSPVNECLATASADRTARLWSAEGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 GQCIATVSHDRTIKLWSVNSKDIQTMDVD 568
           GQCIATVSHDRTIKLWSVNSKD QTMD+D
Sbjct: 541 GQCIATVSHDRTIKLWSVNSKDEQTMDID 569

[Close]

BLAST of Cucsat.G17425 vs. NCBI nr
Match: KAA0040989.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo var. makuwa] >TYK20339.1 U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1063 bits (2748), Expect = 0.0
Identity = 554/569 (97.36%), Postives = 556/569 (97.72%), Query Frame = 0


Query: 1   MEIDDQNP-STAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60
           MEIDDQNP STAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHE 120
           LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAP+RTAPGSTAEYEISEESRQARERHE
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPARTAPGSTAEYEISEESRQARERHE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
           RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSF         SSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSF---------SSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWS EGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSPEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFH DGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHQDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 GQCIATVSHDRTIKLWSVNSKDIQTMDVD 568
           GQCIATVSHDRTIKLWSVNSKD QTMD+D
Sbjct: 541 GQCIATVSHDRTIKLWSVNSKDKQTMDID 560

[Close]

BLAST of Cucsat.G17425 vs. NCBI nr
Match: XP_022999661.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita maxima])

HSP 1 Score: 1044 bits (2699), Expect = 0.0
Identity = 537/570 (94.21%), Postives = 555/570 (97.37%), Query Frame = 0


Query: 1   MEIDDQNP-STAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPII-R 60
           M++DDQNP STAAESPE LPGGENE+LDNPAEP QPAAT+VIP SIVP+IAPIPPP+I R
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60

Query: 61  PLAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERH 120
           PLAPLPSRP LFRPPV QNGE+RTSDSDSEHDELAPSR   GSTAEYE+SEESRQ RER 
Sbjct: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 181 GQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRL 240
           GQLEKL+KVHEEEEAAATGGTEEAEEEVLQYPFYTEG KALLDARIDIAKYSI+RA+SRL
Sbjct: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240

Query: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300
           ERAKRKRDDPDEDVEAEMDWALRQAESL+LDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLILDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 301 VAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGH 360
           VAK+WSMPQVRKVSNFKGHTERVTDV+FSPVNECLATASADRTARLWSAEGSLL+TFEGH
Sbjct: 301 VAKMWSMPQVRKVSNFKGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360

Query: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSS 420
           LDRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGI FHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420

Query: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSL 480
           CGLDALARVWDLRTGRSVLALEGHVKPVLGV+FSPNGYHLATGGEDNTCRIWDLRKKKSL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKKSL 480

Query: 481 YIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540
           YIIPAHSNL+SQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

Query: 541 DGQCIATVSHDRTIKLWSVNSKDIQTMDVD 568
           DGQCIATVSHDRTIKLWSVNSKD QTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570

[Close]

BLAST of Cucsat.G17425 vs. ExPASy TrEMBL
Match: A0A0A0KHD8 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G404170 PE=4 SV=1)

HSP 1 Score: 1096 bits (2835), Expect = 0.0
Identity = 568/569 (99.82%), Postives = 568/569 (99.82%), Query Frame = 0


Query: 1   MEIDDQNP-STAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60
           MEIDDQNP STAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHE 120
           LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHE
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
           RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 GQCIATVSHDRTIKLWSVNSKDIQTMDVD 568
           GQCIATVSHDRTIKLWSVNSKDIQTMDVD
Sbjct: 541 GQCIATVSHDRTIKLWSVNSKDIQTMDVD 569

[Close]

BLAST of Cucsat.G17425 vs. ExPASy TrEMBL
Match: A0A1S4E4U8 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucumis melo OX=3656 GN=LOC103502534 PE=4 SV=1)

HSP 1 Score: 1087 bits (2811), Expect = 0.0
Identity = 563/569 (98.95%), Postives = 565/569 (99.30%), Query Frame = 0


Query: 1   MEIDDQNP-STAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60
           MEIDDQNP STAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHE 120
           LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAP+RTAPGSTAEYEISEESRQARERHE
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPARTAPGSTAEYEISEESRQARERHE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
           RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWS EGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSPEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFH DGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHQDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 GQCIATVSHDRTIKLWSVNSKDIQTMDVD 568
           GQCIATVSHDRTIKLWSVNSKD QTMD+D
Sbjct: 541 GQCIATVSHDRTIKLWSVNSKDKQTMDID 569

[Close]

BLAST of Cucsat.G17425 vs. ExPASy TrEMBL
Match: A0A5A7TI50 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold228G00300 PE=4 SV=1)

HSP 1 Score: 1063 bits (2748), Expect = 0.0
Identity = 554/569 (97.36%), Postives = 556/569 (97.72%), Query Frame = 0


Query: 1   MEIDDQNP-STAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60
           MEIDDQNP STAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHE 120
           LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAP+RTAPGSTAEYEISEESRQARERHE
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPARTAPGSTAEYEISEESRQARERHE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
           RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSF         SSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSF---------SSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWS EGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSPEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFH DGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHQDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 GQCIATVSHDRTIKLWSVNSKDIQTMDVD 568
           GQCIATVSHDRTIKLWSVNSKD QTMD+D
Sbjct: 541 GQCIATVSHDRTIKLWSVNSKDKQTMDID 560

[Close]

BLAST of Cucsat.G17425 vs. ExPASy TrEMBL
Match: A0A6J1KDQ7 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucurbita maxima OX=3661 GN=LOC111493950 PE=4 SV=1)

HSP 1 Score: 1044 bits (2699), Expect = 0.0
Identity = 537/570 (94.21%), Postives = 555/570 (97.37%), Query Frame = 0


Query: 1   MEIDDQNP-STAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPII-R 60
           M++DDQNP STAAESPE LPGGENE+LDNPAEP QPAAT+VIP SIVP+IAPIPPP+I R
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60

Query: 61  PLAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERH 120
           PLAPLPSRP LFRPPV QNGE+RTSDSDSEHDELAPSR   GSTAEYE+SEESRQ RER 
Sbjct: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 181 GQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRL 240
           GQLEKL+KVHEEEEAAATGGTEEAEEEVLQYPFYTEG KALLDARIDIAKYSI+RA+SRL
Sbjct: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240

Query: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300
           ERAKRKRDDPDEDVEAEMDWALRQAESL+LDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLILDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 301 VAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGH 360
           VAK+WSMPQVRKVSNFKGHTERVTDV+FSPVNECLATASADRTARLWSAEGSLL+TFEGH
Sbjct: 301 VAKMWSMPQVRKVSNFKGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360

Query: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSS 420
           LDRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGI FHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420

Query: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSL 480
           CGLDALARVWDLRTGRSVLALEGHVKPVLGV+FSPNGYHLATGGEDNTCRIWDLRKKKSL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKKSL 480

Query: 481 YIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540
           YIIPAHSNL+SQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

Query: 541 DGQCIATVSHDRTIKLWSVNSKDIQTMDVD 568
           DGQCIATVSHDRTIKLWSVNSKD QTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570

[Close]

BLAST of Cucsat.G17425 vs. ExPASy TrEMBL
Match: A0A6J1G322 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucurbita moschata OX=3662 GN=LOC111450343 PE=4 SV=1)

HSP 1 Score: 1041 bits (2691), Expect = 0.0
Identity = 535/570 (93.86%), Postives = 554/570 (97.19%), Query Frame = 0


Query: 1   MEIDDQNP-STAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPII-R 60
           M++DDQNP STAAESPE LPGGENE+LDNPAEP QPAAT+VIP SIVP+IAPIPPP+I R
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60

Query: 61  PLAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERH 120
           PLAPLPSRP LFRPPV QNGE+RTSDSDSEHDELAPSR   GSTAEYE+SEESRQ RER 
Sbjct: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 181 GQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRL 240
           GQLEKL+KVHEEEEAAATGGTEEAEEEVLQYPFYTEG KALLDARIDIAKYS++RA+SRL
Sbjct: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSVVRAASRL 240

Query: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300
           ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 301 VAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGH 360
           VAK+WSMPQVRKVSNF GHTERVTDV+FSPVNECLATASADRTARLWSAEGSLL+TFEGH
Sbjct: 301 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360

Query: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSS 420
           LDRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGI FHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420

Query: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSL 480
           CGLDALARVWDLRTGRSVLALEGHVKPVLGV+FSPNGYHLATGGEDNTCRIWDLRKK+SL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL 480

Query: 481 YIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540
           YIIPAHSNL+SQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

Query: 541 DGQCIATVSHDRTIKLWSVNSKDIQTMDVD 568
           DGQCIATVSHDRTIKLWSVNSKD QTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570

The following BLAST results are available for this feature:

BLAST of Cucsat.G17425 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22212	5.1e-203	64.39	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana ...	[more]
Q3MHE2	1.5e-114	46.84	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus OX=9913 GN=PRPF4 PE=2 S...	[more]
O43172	1.5e-114	46.84	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens OX=9606 GN=PRPF4 PE=1...	[more]
Q5NVD0	1.5e-114	46.84	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii OX=9601 GN=PRPF4 PE=2...	[more]
Q9DAW6	2.6e-114	46.84	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus OX=10090 GN=Prpf4 PE=...	[more]

BLAST of Cucsat.G17425 vs. NCBI nr


Match Name	Identity	Description
XP_004146749.1	99.82	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis sativus] >XP_03...	[more]
XP_008464716.1	98.95	PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo...	[more]
XP_038885479.1	97.01	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Benincasa hispida] >XP_...	[more]
KAA0040989.1	97.36	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo var. makuw...	[more]
XP_022999661.1	94.21	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita maxima]	[more]

BLAST of Cucsat.G17425 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0KHD8	99.82	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G...	[more]
A0A1S4E4U8	98.95	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucumis melo OX=3656 ...	[more]
A0A5A7TI50	97.36	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucumis melo var. mak...	[more]
A0A6J1KDQ7	94.21	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucurbita maxima OX=3...	[more]
A0A6J1G322	93.86	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucurbita moschata OX...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 174..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..118
None	No IPR available	PANTHER	PTHR19846	WD40 REPEAT PROTEIN	coord: 103..562
None	No IPR available	PANTHER	PTHR19846:SF3	BNAC04G01920D PROTEIN	coord: 103..562
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 481..514 score: 9.151057
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 524..559 score: 11.286501
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 355..391 score: 10.917412
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 397..434 score: 10.917412
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 314..346 score: 11.207411
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 439..473 score: 13.2374
None	No IPR available	CDD	cd00200	WD40	coord: 278..556 e-value: 6.69406E-91 score: 279.605
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 543..557 score: 31.77 coord: 458..472 score: 40.13 coord: 333..347 score: 36.13
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 263..304 e-value: 0.021 score: 24.0 coord: 348..387 e-value: 1.1E-7 score: 41.6 coord: 307..346 e-value: 1.3E-8 score: 44.6 coord: 474..514 e-value: 2.1E-4 score: 30.6 coord: 390..429 e-value: 2.5E-6 score: 37.0 coord: 517..556 e-value: 3.0E-10 score: 50.1 coord: 432..471 e-value: 4.4E-11 score: 52.8
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 398..429 e-value: 5.3E-4 score: 20.7 coord: 519..556 e-value: 1.6E-6 score: 28.7 coord: 311..346 e-value: 1.0E-4 score: 23.0 coord: 436..471 e-value: 5.4E-9 score: 36.5 coord: 349..387 e-value: 1.3E-4 score: 22.7
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 397..438 score: 14.251289
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 355..396 score: 13.482671
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 481..523 score: 11.878597
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 439..480 score: 16.958164
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 314..346 score: 13.516088
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 524..565 score: 14.017362
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	SMART	SM00500	pr04_2	coord: 138..191 e-value: 5.3E-18 score: 75.8
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	PFAM	PF08799	PRP4	coord: 143..170 e-value: 1.1E-12 score: 47.2
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 440..567 e-value: 2.3E-40 score: 140.5
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 256..439 e-value: 1.2E-49 score: 170.9
IPR036285	PRP4-like superfamily	GENE3D	4.10.280.110		coord: 109..185 e-value: 1.6E-14 score: 55.1
IPR036285	PRP4-like superfamily	SUPERFAMILY	158230	PRP4-like	coord: 120..176
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 416..430
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 458..472
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 374..388
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 272..555

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G17425.T1	Cucsat.G17425.T1	mRNA
Cucsat.G17425.T5	Cucsat.G17425.T5	mRNA
Cucsat.G17425.T2	Cucsat.G17425.T2	mRNA
Cucsat.G17425.T4	Cucsat.G17425.T4	mRNA
Cucsat.G17425.T3	Cucsat.G17425.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex
molecular_function	GO:0005515	protein binding
molecular_function	GO:0030621	U4 snRNA binding
molecular_function	GO:0017070	U6 snRNA binding