Cucsat.G17290 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G17290
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	centromere protein V-like
Location	ctg27: 2105497 .. 2109734 (+)
RNA-Seq Expression	Cucsat.G17290
Synteny	Cucsat.G17290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCACTTCTAAAAAGATTACATTATAAAACTATTTTTATCAAGTTTCCTTGAAAGCCCTTCATCGGTCGGCGCCGGTTCCCTGATTCACGGTTACGAACGCCCGTCGGCCACTGAGGTTGAGGTTCGTTTGCTCTTCTTTCCTTCATCTTCGACTTTTTCTCAATCCAAAATTTGTTTCTGCAGTCCTCCTCCTCCTCCTCTCCCATCTCATTTTTCGTTTTGTTCTCTATTTCTCATGGATCCAAACACCCCTTGGATTTCTAGTAATTTGATTACATTCCAGCTTGAGATATTCTCTTTTTCAAAATCTTTGATATATTGATATGTGATTCAGTTTATATTTGTTAAATTCTGTTTAAGCTGGCTTTTGAATTACAACTTGTTGTTTTAAGCTCCATCCAAGTTGATTTAAACCAATTGTATACCTATTACCTAGGTACTCATCAAACTTGTGTAACTTCTATTTCATCGAAACTTCTTTCTTGCTATGAAGTTAGACTATATTTCTAACTTTTACTTTGAAGAAACCGTTATGAGGAAGTGATGATGGAATGTTCTTCCCCATTCACCCACTATAACTTTTAGAATCTCCCTACCTTGTTTTGTAAACTTCATACATCAATAAAGTTTGTTTCTTATACAAGATAATACACACACACACCTTCTCAAGTTGTAGCCAAACCAAAAAATGGGAGGGTACCGCATTGGGCAGAAGGCGATCCAAAAGTCAAAGGCTCACACTTATTATTAATATTCACTCTAAAAGAAGGAAGGATCTTTGGCATAAAGTACCTTCTTATTAGAGAAAGGGCAACTTAATAATAAGAAAAGAGGGGGTGAGGTAGGCGACAGGTAGCTTGCTTCCAAGCTGGCCCATTAGGATTCTATTAGTATGAAGAGCCGAAAACATTACCACCATCAACGGTTGATGATATTAAAACCCAGACCTGTTACTAATGTACTGACCCCCCAACACCAGCCAACTATAAGAGCAGATTGGCGAACTGGGTGATCTTTTGCCTAAACCTCATAGGAAGAAGACAGCATTTTAGGACTCAGTCCGTTGTTCTAGTGATAGGGACTGTCTTAAGTTGGTTTGGGTTAAAAGCTTGTTAGAATACTGATTTCAATACATTCCTTCCTTCTATTTTCACTGATTTCCAGTGAAGGTTCCTTTTTTCATTATCTTCTTGGTTACTAAACTTACTAGCATTTTCCCTCCCTTTTTCTTTAAGTCATTTATATGTGAGGTTCTACAACATGTTAATAATTGTACTGGGTTAATCTTACAGACCCTAAGCTAAGTTCAAAAAACTTCTACTTCAAGGCTTAGTTCAAAAGAGATCTTGAAACTCCAGTTGAGGTATTCCTATCAAGGTCATGGGACTAAAATTTGAGATGTGAAAGAAAGTTACTTATATTGTTGGAGTAGCAATGAGGTTACTTGTAGAAATCGAAGGTTACCTTGAGAAAAGATCATGAGGAGCATATCATTCAATTGACGTTCTTTCCTTTTCTCATACGATATTGTAGTAACATGATTGCCACAACCCACTTTAAATTTGTTTTGAGTCTTTCTTTTACGAATACCAGTTAAGGTGGTTTGTAGGTCTCTGAAGAAGAGTTTTTAATAGAGGAATATAAGAGTGTGGATCTACTTTTTTCTAAGTTCAATCTCTAGTTAATTTTGGCCTCGATGAAGATAGATTAATAGAACTGTTTGTTGTAAATTGGTTCCTTTGAAACTCAATTCTAATCATTTCAAACTTGCATTCTACTTTTGCCAAGCTATTCTAGGGCAGTAAGTGCTCTTAAATGGTCAAGTTTCTGTTATGATCCATAGCCTACACGAAGTTATACTCAATTTTGACCTAGATTTTTTATTATGTGGAAAGGATGTGTAAAATATGAATATTCTATTCGTTTAATTTAATTTTGCCACTAATTTTTGGATTTTCAATCGTGATCTCCGTTTTCAAAGACATGGAAAACTGGCTTCTAATAGTGCTTTTGATCTCCACTCAAAAGTTAGATTTTGATGAAAAGGGTGATACTAGGATCTTTCTTTCATCTCTATGATTAGAAAGAAACAATAGGATCTTCAATCATGTCTGAACTGTTGGCTAATTGCACATATATTGACCTCAAATTAGAATGTCATCCAAACGGATTTCAGTAATTATGACAGATTTTTTATTTACTCAGACTGGAAGCGTTCTTATTTCCCTTTTAAATGATAAGGTCCTCTTCCCTTTGATGTTTTGGCTGTATTCTCAATTGTTATCTCTTGTCAAAAAGTAAATAATTGAAAAATAGAAAGATAATATGATATGATTCATAATTGGATCAATTTGAAACATGGACCAACTTTCTTTTCTGTTTTAGTTTACTAGGTCTATACCTTTTACTCAGGAAAACGAATAATCATTCACTAAAAGGATTGGAAGGTTTGATTCCTTTTCAATGGCTTCTGAGTTGGTTGTACATCATGGTGGATGTCACTGCAAGAAAGTAAGATGGCGAGTTGAAGCACCTGCCAGTGTTGTTGCTTGGGATTGCAACTGTTCCAACTGCTTCATGAGGGCCAATACACATTTTATTGTACCTTTGGAACGGTTCAAGCTTTTAGGAGATTCTAGCAACTTTGTTTCTACCTACACATTTGGTTCTCACACTGCAAAACATACCTTCTGCAAAAACTGCGGCATTACCTCATTTTACCATCCACGCTCAAATCCAGATGGAGTTGCTATTACTTTCAAATGTGTTGATCCTGGAACTTTGACCCATATTGAGGTTAGGCAGTTTGATGGGAGCAACTGGGAGGCCTCTTGTGATCAAACAGGCATTGCTTCATTGTCAAAGTTGAACATAAGTTAGTATGCATTTTGACAACTGCTGTAAACTAAATTTATGACCGTTGATGATTGATACAAACTTTTTTTATATGGCTTCCATCAACGATTGATATGGCTGCTTGAAAAGGTTTGTTGCTCGGACAACCCCTTCACGTGCAAACTTCCCCTTGCCGCTCGCTCTTTCCATTGTCGATCAGGATTTCCCATTACTGATAAAAATAGGTGCTACGTCTGGTCGGTAGTGTTTGGGTCGAGCAAGGTAGGAAAGGAGGTGATGTTTTCTCTATTGTTTTCCAATGCCGATGATGAGATCTCCATTTTCATAGTTTTTCTTATTCATGATCATACTTTATTCTACCAAATATGTTTTTTTAATTAGTTGTGAATCTGTATTTTGCTATTTATGTTCATGTTTGATGCTGCTGTCTATATCCAATTTGCCTACCCATAGCTTATGCCATTACTCCTACTGTGTGTATATCGTGAATACTTATGTACTTTCCATTGCAATATGCTTCTGTATATTTTTTTTACCTAAGCTTCTGATGCTTCTGTCCCCCCCCCCCCCCCCCCCCCTTTTTGTAAGTACACATCATGTGCATTATGTGGTAGGCATGTTGCATTTGAACTTTGACCCACTTTTCTTTACCCATTTGTTGTATGTCGTCTTTCCCATTGTCATCAGTCCATGCTCAGGTTTGCTTGTTTAGGGGTCTTCAATGTCATTACTTCTTCCATTTCCCATCTATATATACTTGCTATGCCATTGCATAGTAACTCTTGGTTCTCCCTTTGTTTGGTAATGTATATGCATCCATCTGTTTGTGTTCCATTGTGTGTTTGGTCTTCACAGTCTACCTATGCACTTGTCATTGATTGATGTTGCGATCCATGCTATGCCACTTGTTGTTTATTTCCATGCCTTTCATGTCACCACTTGCATACTACGACCCGGTTCCATTTTTGTTGTCCATTCACATGTCCTTCATATCTCCACATTTGAGGTTTGTGTTCCATTGTTGTTGTTCATTTCCATGATTTTCATATCACCACATATTGAGGCTCGTGTTCCATTGTTGCTGTTCATTTTCCATGCCTTTCATATCACCACATTTGATACTGTTACATTTTTGTAGCTTTTTTTCCATTTTCTTTGTTCATGTGCACGCCTTTCATATCTTCACATTTCCTAGCATTGCATATGTGAAGACATTTGTTTCACTCCATGAAGTTCAATTTCAAATTATTGAACAAATTTCCTTCCTCTAAGGCACTCAAAATTTTCACATTGTTCACGTTTTTTTTTTGACGTAATTGTTGATTGTTTGTTCATTTGTCCTTCGTATGTCTTTGGGAAAGATCGCACAACGGGCGCAC

Coding sequence (CDS)

ATGGCTTCTGAGTTGGTTGTACATCATGGTGGATGTCACTGCAAGAAAGTAAGATGGCGAGTTGAAGCACCTGCCAGTGTTGTTGCTTGGGATTGCAACTGTTCCAACTGCTTCATGAGGGCCAATACACATTTTATTGTACCTTTGGAACGGTTCAAGCTTTTAGGAGATTCTAGCAACTTTGTTTCTACCTACACATTTGGTTCTCACACTGCAAAACATACCTTCTGCAAAAACTGCGGCATTACCTCATTTTACCATCCACGCTCAAATCCAGATGGAGTTGCTATTACTTTCAAATGTGTTGATCCTGGAACTTTGACCCATATTGAGGTTAGGCAGTTTGATGGGAGCAACTGGGAGGCCTCTTGTGATCAAACAGGCATTGCTTCATTGTCAAAGTTGAACATAAGTTAG

Protein sequence

MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNWEASCDQTGIASLSKLNIS

Homology

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BLAST of Cucsat.G17290 vs. ExPASy Swiss-Prot
Match: Q9CXS4 (Centromere protein V OS=Mus musculus OX=10090 GN=Cenpv PE=1 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 6.0e-33
Identity = 66/131 (50.38%), Postives = 86/131 (65.65%), Query Frame = 0


Query: 5   LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVST 64
           LV H GGCHC  VR+ V A A +  +DCNCS C  + N HFIVP  RFKLL  + + ++T
Sbjct: 122 LVKHTGGCHCGAVRFEVWASADLHIFDCNCSICKKKQNRHFIVPASRFKLLKGAES-ITT 181

Query: 65  YTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNWE-AS 124
           YTF +H A+HTFCK CG+ SFY PRSNP G  I   C+D GT+  +   +F+GS+WE A 
Sbjct: 182 YTFNTHKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDEGTVRSVVTEEFNGSDWERAM 241

Query: 125 CDQTGIASLSK 135
            +   I ++SK
Sbjct: 242 KEHKTIKNMSK 251

[Close]

BLAST of Cucsat.G17290 vs. ExPASy Swiss-Prot
Match: Q7Z7K6 (Centromere protein V OS=Homo sapiens OX=9606 GN=CENPV PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-32
Identity = 66/131 (50.38%), Postives = 85/131 (64.89%), Query Frame = 0


Query: 5   LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVST 64
           LV H GGCHC  VR+ V A A +  +DCNCS C  + N HFIVP  RFKLL   +  ++T
Sbjct: 145 LVKHTGGCHCGAVRFEVWASADLHIFDCNCSICKKKQNRHFIVPASRFKLL-KGAEHITT 204

Query: 65  YTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNWE-AS 124
           YTF +H A+HTFCK CG+ SFY PRSNP G  I   C+D GT+  +   +F+GS+WE A 
Sbjct: 205 YTFNTHKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDEGTVRSMVTEEFNGSDWEKAM 264

Query: 125 CDQTGIASLSK 135
            +   I ++SK
Sbjct: 265 KEHKTIKNMSK 274

[Close]

BLAST of Cucsat.G17290 vs. ExPASy Swiss-Prot
Match: A0A0U1RR11 (Centromere protein V-like protein 1 OS=Homo sapiens OX=9606 GN=CENPVL1 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.7e-20
Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 5   LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVST 64
           LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP  RF LL  + + V T
Sbjct: 130 LVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLLQGAESIV-T 189

Query: 65  YTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSN 120
           Y   +H A H+FC  CG+ SF+   S+P    +   C+D GT+  + + +  G +
Sbjct: 190 YRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVGGGD 243

[Close]

BLAST of Cucsat.G17290 vs. ExPASy Swiss-Prot
Match: P0DPI3 (Centromere protein V-like protein 2 OS=Homo sapiens OX=9606 GN=CENPVL2 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.7e-20
Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 5   LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVST 64
           LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP  RF LL  + + V T
Sbjct: 130 LVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLLQGAESIV-T 189

Query: 65  YTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSN 120
           Y   +H A H+FC  CG+ SF+   S+P    +   C+D GT+  + + +  G +
Sbjct: 190 YRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVGGGD 243

[Close]

BLAST of Cucsat.G17290 vs. ExPASy Swiss-Prot
Match: A0A0U1RRI6 (Centromere protein V-like protein 3 OS=Homo sapiens OX=9606 GN=CENPVL3 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.7e-20
Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 5   LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVST 64
           LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP  RF LL  + + V T
Sbjct: 145 LVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLLQGAESIV-T 204

Query: 65  YTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSN 120
           Y   +H A H+FC  CG+ SF+   S+P    +   C+D GT+  + + +  G +
Sbjct: 205 YRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVGGGD 258

[Close]

BLAST of Cucsat.G17290 vs. NCBI nr
Match: XP_004146757.2 (centromere protein V [Cucumis sativus] >XP_004146758.2 centromere protein V [Cucumis sativus] >XP_031743695.1 centromere protein V [Cucumis sativus] >KAE8647287.1 hypothetical protein Csa_003537 [Cucumis sativus])

HSP 1 Score: 301 bits (772), Expect = 3.24e-103
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120

Query: 121 EASCDQTGIASLSKLNIS 138
           EASCDQTGIASLSKLNIS
Sbjct: 121 EASCDQTGIASLSKLNIS 138

[Close]

BLAST of Cucsat.G17290 vs. NCBI nr
Match: XP_016903271.1 (PREDICTED: centromere protein V isoform X6 [Cucumis melo])

HSP 1 Score: 286 bits (731), Expect = 2.30e-97
Identity = 131/138 (94.93%), Postives = 133/138 (96.38%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTH+EVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASCDQTGIASLSKLNIS 138
           EAS D TGIAS SKLN S
Sbjct: 121 EASYDHTGIASFSKLNTS 138

[Close]

BLAST of Cucsat.G17290 vs. NCBI nr
Match: XP_008464793.1 (PREDICTED: centromere protein V isoform X5 [Cucumis melo])

HSP 1 Score: 285 bits (728), Expect = 6.83e-97
Identity = 130/136 (95.59%), Postives = 132/136 (97.06%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTH+EVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASCDQTGIASLSKLN 136
           EAS D TGIAS SKLN
Sbjct: 121 EASYDHTGIASFSKLN 136

[Close]

BLAST of Cucsat.G17290 vs. NCBI nr
Match: XP_008464792.1 (PREDICTED: centromere protein V isoform X4 [Cucumis melo])

HSP 1 Score: 285 bits (728), Expect = 7.31e-97
Identity = 130/136 (95.59%), Postives = 132/136 (97.06%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTH+EVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASCDQTGIASLSKLN 136
           EAS D TGIAS SKLN
Sbjct: 121 EASYDHTGIASFSKLN 136

[Close]

BLAST of Cucsat.G17290 vs. NCBI nr
Match: XP_008464791.1 (PREDICTED: centromere protein V isoform X3 [Cucumis melo])

HSP 1 Score: 285 bits (728), Expect = 1.40e-96
Identity = 130/136 (95.59%), Postives = 132/136 (97.06%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTH+EVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASCDQTGIASLSKLN 136
           EAS D TGIAS SKLN
Sbjct: 121 EASYDHTGIASFSKLN 136

[Close]

BLAST of Cucsat.G17290 vs. ExPASy TrEMBL
Match: A0A0A0KE05 (CENP-V/GFA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G403060 PE=3 SV=1)

HSP 1 Score: 301 bits (772), Expect = 6.19e-104
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120

Query: 121 EASCDQTGIASLSKLNIS 138
           EASCDQTGIASLSKLNIS
Sbjct: 121 EASCDQTGIASLSKLNIS 138

[Close]

BLAST of Cucsat.G17290 vs. ExPASy TrEMBL
Match: A0A1S4E4W3 (centromere protein V isoform X6 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=1)

HSP 1 Score: 286 bits (731), Expect = 1.11e-97
Identity = 131/138 (94.93%), Postives = 133/138 (96.38%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTH+EVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASCDQTGIASLSKLNIS 138
           EAS D TGIAS SKLN S
Sbjct: 121 EASYDHTGIASFSKLNTS 138

[Close]

BLAST of Cucsat.G17290 vs. ExPASy TrEMBL
Match: A0A1S3CMF5 (centromere protein V isoform X5 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=1)

HSP 1 Score: 285 bits (728), Expect = 3.31e-97
Identity = 130/136 (95.59%), Postives = 132/136 (97.06%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTH+EVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASCDQTGIASLSKLN 136
           EAS D TGIAS SKLN
Sbjct: 121 EASYDHTGIASFSKLN 136

[Close]

BLAST of Cucsat.G17290 vs. ExPASy TrEMBL
Match: A0A1S3CNW6 (centromere protein V isoform X4 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=1)

HSP 1 Score: 285 bits (728), Expect = 3.54e-97
Identity = 130/136 (95.59%), Postives = 132/136 (97.06%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTH+EVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASCDQTGIASLSKLN 136
           EAS D TGIAS SKLN
Sbjct: 121 EASYDHTGIASFSKLN 136

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BLAST of Cucsat.G17290 vs. ExPASy TrEMBL
Match: A0A1S3CMT5 (centromere protein V isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=1)

HSP 1 Score: 285 bits (728), Expect = 6.78e-97
Identity = 130/136 (95.59%), Postives = 132/136 (97.06%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTH+EVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASCDQTGIASLSKLN 136
           EAS D TGIAS SKLN
Sbjct: 121 EASYDHTGIASFSKLN 136

The following BLAST results are available for this feature:

BLAST of Cucsat.G17290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CXS4	6.0e-33	50.38	Centromere protein V OS=Mus musculus OX=10090 GN=Cenpv PE=1 SV=2	[more]
Q7Z7K6	1.3e-32	50.38	Centromere protein V OS=Homo sapiens OX=9606 GN=CENPV PE=1 SV=1	[more]
A0A0U1RR11	7.7e-20	39.13	Centromere protein V-like protein 1 OS=Homo sapiens OX=9606 GN=CENPVL1 PE=2 SV=1	[more]
P0DPI3	7.7e-20	39.13	Centromere protein V-like protein 2 OS=Homo sapiens OX=9606 GN=CENPVL2 PE=3 SV=1	[more]
A0A0U1RRI6	7.7e-20	39.13	Centromere protein V-like protein 3 OS=Homo sapiens OX=9606 GN=CENPVL3 PE=3 SV=1	[more]

BLAST of Cucsat.G17290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146757.2	3.24e-103	100.00	centromere protein V [Cucumis sativus] >XP_004146758.2 centromere protein V [Cuc...	[more]
XP_016903271.1	2.30e-97	94.93	PREDICTED: centromere protein V isoform X6 [Cucumis melo]	[more]
XP_008464793.1	6.83e-97	95.59	PREDICTED: centromere protein V isoform X5 [Cucumis melo]	[more]
XP_008464792.1	7.31e-97	95.59	PREDICTED: centromere protein V isoform X4 [Cucumis melo]	[more]
XP_008464791.1	1.40e-96	95.59	PREDICTED: centromere protein V isoform X3 [Cucumis melo]	[more]

BLAST of Cucsat.G17290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE05	6.19e-104	100.00	CENP-V/GFA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G403060 ...	[more]
A0A1S4E4W3	1.11e-97	94.93	centromere protein V isoform X6 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=...	[more]
A0A1S3CMF5	3.31e-97	95.59	centromere protein V isoform X5 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=...	[more]
A0A1S3CNW6	3.54e-97	95.59	centromere protein V isoform X4 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=...	[more]
A0A1S3CMT5	6.78e-97	95.59	centromere protein V isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.170.150.70		coord: 8..124 e-value: 4.1E-24 score: 86.6
None	No IPR available	PANTHER	PTHR28620	CENTROMERE PROTEIN V	coord: 1..135
None	No IPR available	PANTHER	PTHR28620:SF9	CARBON-SULFUR LYASES	coord: 1..135
IPR006913	CENP-V/GFA domain	PFAM	PF04828	GFA	coord: 31..105 e-value: 2.3E-7 score: 31.0
IPR006913	CENP-V/GFA domain	PROSITE	PS51891	CENP_V_GFA	coord: 8..121 score: 24.590271
IPR011057	Mss4-like superfamily	SUPERFAMILY	51316	Mss4-like	coord: 6..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G17290.T1	Cucsat.G17290.T1	mRNA
Cucsat.G17290.T2	Cucsat.G17290.T2	mRNA
Cucsat.G17290.T3	Cucsat.G17290.T3	mRNA
Cucsat.G17290.T4	Cucsat.G17290.T4	mRNA
Cucsat.G17290.T9	Cucsat.G17290.T9	mRNA
Cucsat.G17290.T5	Cucsat.G17290.T5	mRNA
Cucsat.G17290.T6	Cucsat.G17290.T6	mRNA
Cucsat.G17290.T7	Cucsat.G17290.T7	mRNA
Cucsat.G17290.T8	Cucsat.G17290.T8	mRNA
Cucsat.G17290.T10	Cucsat.G17290.T10	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016846	carbon-sulfur lyase activity
molecular_function	GO:0046872	metal ion binding