Cucsat.G17285 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G17285
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	RNA-directed DNA polymerase
Location	ctg27: 2001413 .. 2004232 (+)
RNA-Seq Expression	Cucsat.G17285
Synteny	Cucsat.G17285

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGAAGTTGTATGTTTTATATTTTCTTGATATTTTAGTTGAGTATTGGGTTTAGTATAAAAACCCCTAGTTTGTCATTTTATTTGAATAATAGAAAAATTCCAGAAAAAAGCCTTTAGTCTTCTTTACATGTTCCTGTCCAAGAATTCAGACACACACCACCAATCAGAGCTTCACCAATGAAGGAAGTTGTGACCGGCAAGAACACCTCCGACAAGGAAAAGGAGGTAGTGCCGACAGAGGAAGAAATCCCATCTCCACGCACTTCGACTGCCCGATTGATGACCGTTGAAGAAAGCATAGCAGAAATATTCGACCGAATGGGAGTTCTTGAAACCACCATGGAGAGACTTGCTCGCAGGCTTGAAGAGGCATTGAGTGCCCTTCCCCAGCAGCAAGAGATCGGCAACGGTAACCACCAAGAACTCCGATGCATTGCCGGCCGAAATTCTGGCCAGTCAGACCATGAAAATCGCCAGAGTTCGTCAGAATCGTCCGACGAAGGTGGGGAACCACCTCAGCGGCCGCCGGTTACAAGAGCCCAATATGGGTCTTCAAGTTTCGGAGGGTTCTGAAGATGAAGAGACGTTTTTTCGGCCAGGCCAAAGAAAGGGAAGAAATATGAGAGACGGCCGGCGACAGAGAGAGATTGGATATCAAAACCCAGTTTTCAGAAGAGGCCGAAATGGTGGAGAAGACTATTTTGAAGGCAGATTAGAATCAGCCCAATACAAAGGAGATGGAAGAAGAGAAATATTTCAGCAAGACTTCAAGATGAAGGTCGATTTTACCAAATTTCAGCGGTAAATTGGATATAGAAGCATTTCTCGATTGGGTTAAAAATGTGGAGAGCTTCTTTGAGTATATAGAGACAGCCGAAGACAAGAAAGTCAAGATGGTCGCGTTGAAGCTCAAATCGGGTGCATCGACTTGGTGGGATCAAATCCAAGCCAATCGACGTTTAATTGGCAAAACACCCATAAGGAGCTGGCCAAGAATGCTCAAGATGATGAAAGAACGCTTCCTACCCACGGATTTCGAACAGATTCTTTATCAACAATACCAACAATGCCGCCAAGATAATAGGAAAGTGGCAGAATATGCTAAGGAGTTCCACCGTCTAAGTGCAAGAACCCAAACGAACGAGAGTGAAAATTATCAAATAGGCAGATTTGTTGATGGTCTTAAGGAGAACATACACGAACAGCTAGATTTACAGCCCATAGCCACGTTACCGGCCACAATTTCGATGGTTTTTAAAGCTGAATTGAAGCTGGAAAAAAGGCAGAAAAACAGCGACACCAAGAAGAACCAGTGGGAGAAGGCATTCATCCCGTACCAACGAAAGAATTATGACAATACTAAACAAGCTCAAGGCTCTGGTACATCAAAGGCGAAAGAAGAACAACCTTCCAAAACAAACCAAAGCCCAAGAACTCAAGAACTCTCTACCAAGAACGGTTCAACCAACTACCCAAGACCGAATTTGGGATTTTGCTACCGACGCAACCAAAACGGACACTTATCCAATCAGTGCCCACAACGGAAAACGGTAGCATATGTTGAGGAAGGAGGGAGCCAAGAAGACGAAGCGAAACCTAATTCCGAAGAGGAAATAAACGAGTTGGAACCGGATGAAGGGGAACAACTATCTTGTGTGATACAACGAATTCTCCTAACACCAAAAACGGAAACTCACCCTCGACGACATTCATTGTTCCGTACACGCTGCACAATTAACGGTAAACTTTGCAATGTCATAATTGATAGCGGAAGTAGCGAGAGCATTGTCTACTCAAAACTTGTTCAAGCGCTCAAACCTCAAACTTGACCCACATCCACAGCCATACAAAGTGAGTTGGATAAAAAAAAGCGGGGTATGATTCTGTCCTTGTTATAGTTGATCGATTTAGCAAAATGTCTCACTTCTTGCCTTGTAGGAAAACATCGGATGCCATTTATATTGCTAATCTGTTTTTTAAAGAATTGGTATGGTTGCATGGAATCCCCAAGTCCATAGTTTCCGACCGTGACGTCAAGTTCCTAAGTCACTTTTAGAAGACACTTTGGAAAAAATTCAACACAACTCTCAAGTTTAGCACCACTAGTCACCCCCAAACCAATGGGCAGACCGAGGTTACAAATAGGATGCTTGCCAATCTCATAAGGTGCATTGGAGGTGATAAACCTAAGCAGATCTTGTCCTAGCCCAAGCAGAATTTGGGTACAATCACATGAAAAACTGAACAACAGGGAAGTCACCATTTGAAAAAGTGTATACTAAGTTACCTAGACTAACTGTTGATCTTACTAACATACCTTCTAATGTTGATTTTAGCTCCGAAGTTGAAAATATGGCGGAAAGAATAACAAAGCTCCATAAAGTCATAACCGCCCAAATTGAAAAGATGAACCAAGCATACAAAAGTCAAGACGATAAACATCGAAGATTTAAAGAATTCAAGGGAAGAGATCTAGTACTGATACACCTTCGAAAGGCAAGACTATCGGCAGGAAAATACAACAAACTACAGCCAAAGAAGATAGGACTGTATCCAATAATCAAGAGATTTGGAGATAATGCATACAAGATTGATCTCCCCCATCACATACACATTAATCCTATCTTCAATGTGGTTGATATATTCAAGTATTTCCCTCCCGACCAGCTACGCCTTTCAACCTAAAACTCGAGGACGAGTTTGCTCTTCTTAAGGGGGAGGAATTTGATGTATTATGCTCACTGTGCTGTTAGCAATTAGTTGACTGTTGGTTTTATATTCCCCTGATATTTTAGAAGTTGTAACGTTTTATATTTTC

Coding sequence (CDS)

ATGGTCGCGTTGAAGCTCAAATCGGGTGCATCGACTTGGTGGGATCAAATCCAAGCCAATCGACGTTTAATTGGCAAAACACCCATAAGGAGCTGGCCAAGAATGCTCAAGATGATGAAAGAACGCTTCCTACCCACGGATTTCGAACAGATTCTTTATCAACAATACCAACAATGCCGCCAAGATAATAGGAAAGTGGCAGAATATGCTAAGGAGTTCCACCGTCTAAGTGCAAGAACCCAAACGAACGAGAGTGAAAATTATCAAATAGGCAGATTTGTTGATGGTCTTAAGGAGAACATACACGAACAGCTAGATTTACAGCCCATAGCCACGTTACCGGCCACAATTTCGATGGTTTTTAAAGCTGAATTGAAGCTGGAAAAAAGGCAGAAAAACAGCGACACCAAGAAGAACCAGTGGGAGAAGGCATTCATCCCGTACCAACGAAAGAATTATGACAATACTAAACAAGCTCAAGGCTCTGGTACATCAAAGGCGAAAGAAGAACAACCTTCCAAAACAAACCAAAGCCCAAGAACTCAAGAACTCTCTACCAAGAACGGTTCAACCAACTACCCAAGACCGAATTTGGGATTTTGCTACCGACGCAACCAAAACGGACACTTATCCAATCAGTGCCCACAACGGAAAACGGTAGCATATGTTGAGGAAGGAGGGAGCCAAGAAGACGAAGCGAAACCTAATTCCGAAGAGGAAATAAACGAGTTGGAACCGGATGAAGGGGAACAACTATCTTGTGTGATACAACGAATTCTCCTAACACCAAAAACGGAAACTCACCCTCGACGACATTCATTGTTCCGTACACGCTGCACAATTAACGGTAAACTTTGCAATGTCATAATTGATAGCGGAAGTAGCGAGAGCATTGTCTACTCAAAACTTGTTCAAGCGCTCAAACCTCAAACTTGA

Protein sequence

MVALKLKSGASTWWDQIQANRRLIGKTPIRSWPRMLKMMKERFLPTDFEQILYQQYQQCRQDNRKVAEYAKEFHRLSARTQTNESENYQIGRFVDGLKENIHEQLDLQPIATLPATISMVFKAELKLEKRQKNSDTKKNQWEKAFIPYQRKNYDNTKQAQGSGTSKAKEEQPSKTNQSPRTQELSTKNGSTNYPRPNLGFCYRRNQNGHLSNQCPQRKTVAYVEEGGSQEDEAKPNSEEEINELEPDEGEQLSCVIQRILLTPKTETHPRRHSLFRTRCTINGKLCNVIIDSGSSESIVYSKLVQALKPQT

Homology

[Close]

BLAST of Cucsat.G17285 vs. NCBI nr
Match: XP_031743026.1 (uncharacterized protein LOC116404533 [Cucumis sativus])

HSP 1 Score: 271 bits (692), Expect = 2.61e-83
Identity = 150/307 (48.86%), Postives = 202/307 (65.80%), Query Frame = 0


Query: 1   MVALKLKSGASTWWDQIQANRRLIGKTPIRSWPRMLKMMKERFLPTDFEQILYQQYQQCR 60
           +VALKL++GAS WWDQ++ NR+  GK P+RSW +M K++K RFLP ++EQ LY QYQ CR
Sbjct: 212 LVALKLRAGASAWWDQLEINRQRCGKQPVRSWEKMKKLLKARFLPPNYEQTLYNQYQNCR 271

Query: 61  QDNRKVAEYAKEFHRLSARTQTNESENYQIGRFVDGLKENIHEQLDLQPIATLPATISMV 120
           Q  R VAEY +EFHRLSART  +E+E +Q+ RFV GL+ +I E++ LQP   L   IS  
Sbjct: 272 QGVRTVAEYIEEFHRLSARTNLSENEQHQVARFVGGLRFDIKEKVRLQPFRFLSEAISFA 331

Query: 121 FKAELKLEKRQKNSDTKKNQWEKAFIPYQRKNYDNTKQAQGSGTSKAKEEQPSKTNQSPR 180
              E  +  R KN + +++ WE      +  +  +T     S  +K KE    +     +
Sbjct: 332 ETVEEMIAIRSKNLN-RRSAWETNSTKSKTNDQPST-----STKAKGKEIDNQEVAVERK 391

Query: 181 TQELSTKNGSTNYPRPNLGFCYRRNQNGHLSNQCPQRKTVAYVEEGGSQEDEAKPNSEEE 240
            ++    +G  NY RP+LG C+R  Q GHLSN CPQRKT+A  EEGG Q  E    +EEE
Sbjct: 392 KEQTFKPSGQNNYSRPSLGKCFRCGQTGHLSNNCPQRKTIAIAEEGG-QTSEDSIEAEEE 451

Query: 241 INELEPDEGEQLSCVIQRILLTPKTETHPRRHSLFRTRCTINGKLCNVIIDSGSSESIVY 300
              +E D+GE++SCVIQR+L+TPK E + +RH LF+TRCTING++C+VIIDSGSSE+ V 
Sbjct: 452 TELIEADDGERVSCVIQRLLITPKEEKNLQRHCLFKTRCTINGRVCDVIIDSGSSENFVA 511

Query: 301 SKLVQAL 307
            KLV  L
Sbjct: 512 KKLVTVL 511

[Close]

BLAST of Cucsat.G17285 vs. NCBI nr
Match: XP_031741035.1 (uncharacterized protein LOC116403692 [Cucumis sativus])

HSP 1 Score: 266 bits (681), Expect = 1.73e-78
Identity = 148/307 (48.21%), Postives = 202/307 (65.80%), Query Frame = 0


Query: 1   MVALKLKSGASTWWDQIQANRRLIGKTPIRSWPRMLKMMKERFLPTDFEQILYQQYQQCR 60
           +VALKL++GAS WWDQ++ NR+  GK P+RSW +M K++K RFLP ++EQ LY QYQ CR
Sbjct: 212 LVALKLRAGASAWWDQLEINRQRCGKQPVRSWEKMKKLLKARFLPPNYEQTLYNQYQNCR 271

Query: 61  QDNRKVAEYAKEFHRLSARTQTNESENYQIGRFVDGLKENIHEQLDLQPIATLPATISMV 120
           Q  R VAEY +EFHRLSART  +E+E +Q+ RFV GL+ +I E++ LQP   L   IS  
Sbjct: 272 QGVRSVAEYIEEFHRLSARTNLSENEQHQVARFVGGLRFDIKEKVRLQPFRFLSEAISFA 331

Query: 121 FKAELKLEKRQKNSDTKKNQWEKAFIPYQRKNYDNTKQAQGSGTSKAKEEQPSKTNQSPR 180
              E  +  R KN + +++ WE      +  +  +T     S  +K KE    +     +
Sbjct: 332 ETVEEMIAIRSKNLN-RRSAWETNSTKSKTNDQPST-----STKAKGKEIDNQEVAVERK 391

Query: 181 TQELSTKNGSTNYPRPNLGFCYRRNQNGHLSNQCPQRKTVAYVEEGGSQEDEAKPNSEEE 240
            ++    +G  +Y RP+LG C+R  Q GHLS+ CPQRKT+A  EEGG Q  E    +EEE
Sbjct: 392 KEQTFKPSGQNSYSRPSLGKCFRCGQTGHLSDNCPQRKTIAIAEEGG-QISEDSIEAEEE 451

Query: 241 INELEPDEGEQLSCVIQRILLTPKTETHPRRHSLFRTRCTINGKLCNVIIDSGSSESIVY 300
              +E D+GE++SCVIQR+L+TPK E + +RH LF+TRCTING++C+VIIDSGSSE+ V 
Sbjct: 452 TELIEADDGERVSCVIQRLLITPKEEKNLQRHCLFKTRCTINGRVCDVIIDSGSSENFVA 511

Query: 301 SKLVQAL 307
            KLV  L
Sbjct: 512 KKLVTVL 511

[Close]

BLAST of Cucsat.G17285 vs. NCBI nr
Match: KAA0054966.1 (transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK22755.1 transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 255 bits (652), Expect = 2.34e-73
Identity = 145/311 (46.62%), Postives = 192/311 (61.74%), Query Frame = 0


Query: 1   MVALKLKSGASTWWDQIQANRRLIGKTPIRSWPRMLKMMKERFLPTDFEQILYQQYQQCR 60
           +VALKLK GAS WWDQI  NR+  GK PIRSW +M K+MK+RF+P ++EQ LY QYQ CR
Sbjct: 197 LVALKLKGGASAWWDQITVNRQKQGKHPIRSWEKMKKLMKQRFVPPNYEQTLYTQYQNCR 256

Query: 61  QDNRKVAEYAKEFHRLSARTQTNESENYQIGRFVDGLKENIHEQLDLQPIATLPATISMV 120
           Q  RK AEY +EFHRL  RT   E E + I  FV GL+ ++ E++ LQP   L   I+  
Sbjct: 257 QGMRKTAEYIEEFHRLGGRTNLMEGEKHLISWFVGGLRFDLKEKVKLQPFQHLSEAITYA 316

Query: 121 FKAELKLEKRQKNSDTKKNQWEKAFIPYQRKNYDNTKQAQGSGTSKAKEEQPSKTNQSPR 180
              E  +E R K+  T+K  WE +    ++    N+K    +     ++E+ S   + P 
Sbjct: 317 ETVEEMIENRAKS--TRKRPWEPSAS--KKTTAGNSKLKNATSEKPVEQEESSGKKEVPE 376

Query: 181 TQELSTKNGSTNYPRPNLGFCYRRNQNGHLSNQCPQRKTVAYVEEGGSQEDEAKPNSEEE 240
            +    K G   Y RP  G CYR  Q GH SNQCPQRKT+A  ++     + +    +EE
Sbjct: 377 GE----KKGKNPYQRPFSGNCYRCGQMGHPSNQCPQRKTIAVAKDNDDGSNRSLGEFDEE 436

Query: 241 INELEPDEGEQLSCVIQRILLTPKTETHPRRHSLFRTRCTINGKLCNVIIDSGSSESIVY 300
              +E DEG+ LSC++QR+L++PK E   +RHSLF+TRCTI GK+CNVIIDSGSSE+ V 
Sbjct: 437 TEVIEADEGDSLSCILQRVLISPKEENQLQRHSLFKTRCTIQGKVCNVIIDSGSSENFVS 496

Query: 301 SKLVQALKPQT 311
            KLV AL  +T
Sbjct: 497 KKLVTALNLKT 499

[Close]

BLAST of Cucsat.G17285 vs. NCBI nr
Match: XP_022138328.1 (uncharacterized protein LOC111009540 isoform X2 [Momordica charantia])

HSP 1 Score: 239 bits (611), Expect = 2.15e-71
Identity = 133/286 (46.50%), Postives = 190/286 (66.43%), Query Frame = 0


Query: 1   MVALKLKSGASTWWDQIQANRRLIGKTPIRSWPRMLKMMKERFLPTDFEQILYQQYQQCR 60
           +VA K++SGAS WWDQ++ N R +GK PIRSWPRML++M+ERFLP +FEQ+LYQ YQ+CR
Sbjct: 187 LVAFKIQSGASAWWDQLEINCRRLGKQPIRSWPRMLRLMRERFLPPNFEQLLYQPYQRCR 246

Query: 61  QDNRKVAEYAKEFHRLSARTQTNESENYQIGRFVDGLKENIHEQLDLQPIATLPATISMV 120
           Q  + +A+Y + FHRL A+T   E+E+Y+I RFVDGL+E+I +Q+D+QPI  L   I M 
Sbjct: 247 QGFKTIADYTEAFHRLGAKTNIAETEDYKIARFVDGLREDIQDQMDIQPIHLLTDAIVMA 306

Query: 121 FKAELKLEKRQKNSDTKKNQWEKAFIPYQRKNYDNTKQAQGSGTSKAKEEQPSKTNQSP- 180
            K E   +K++  +  ++  W+K  I  +    D  K  Q   TS +  + P    +S  
Sbjct: 307 TKIE---DKKRLRTPARRTPWDKPSIS-KTATTDTGKPLQIGTTSASTTKPPDDPAKSSP 366

Query: 181 -RTQELSTKNGSTNYPRPNLGFCYRRNQNGHLSNQCPQRKTVAYVEEGGSQEDEAKPNSE 240
            +T + S+K G+  Y RP LG C+R  Q  HLSN+CPQR+ +A V++    E +    +E
Sbjct: 367 FKTPDTSSKRGTNPYIRPTLGKCFRCGQVDHLSNECPQRRALALVDQDDLLETDIDLPTE 426

Query: 241 EEINELEPDEGEQLSCVIQRILLTPKTETHPRRHSLFRTRCTINGK 284
           ++   +EPDEG+ LSCV+Q++L TPK E  P+R+SLFRT  TINGK
Sbjct: 427 DDPTYVEPDEGDLLSCVVQKVL-TPKVEVQPQRNSLFRTCFTINGK 467

[Close]

BLAST of Cucsat.G17285 vs. NCBI nr
Match: XP_022138327.1 (uncharacterized protein LOC111009540 isoform X1 [Momordica charantia])

HSP 1 Score: 242 bits (617), Expect = 3.11e-71
Identity = 140/307 (45.60%), Postives = 199/307 (64.82%), Query Frame = 0


Query: 1   MVALKLKSGASTWWDQIQANRRLIGKTPIRSWPRMLKMMKERFLPTDFEQILYQQYQQCR 60
           +VA K++SGAS WWDQ++ N R +GK PIRSWPRML++M+ERFLP +FEQ+LYQ YQ+CR
Sbjct: 187 LVAFKIQSGASAWWDQLEINCRRLGKQPIRSWPRMLRLMRERFLPPNFEQLLYQPYQRCR 246

Query: 61  QDNRKVAEYAKEFHRLSARTQTNESENYQIGRFVDGLKENIHEQLDLQPIATLPATISMV 120
           Q  + +A+Y + FHRL A+T   E+E+Y+I RFVDGL+E+I +Q+D+QPI  L   I M 
Sbjct: 247 QGFKTIADYTEAFHRLGAKTNIAETEDYKIARFVDGLREDIQDQMDIQPIHLLTDAIVMA 306

Query: 121 FKAELKLEKRQKNSDTKKNQWEKAFIPYQRKNYDNTKQAQGSGTSKAKEEQPSKTNQSP- 180
            K E   +K++  +  ++  W+K  I  +    D  K  Q   TS +  + P    +S  
Sbjct: 307 TKIE---DKKRLRTPARRTPWDKPSIS-KTATTDTGKPLQIGTTSASTTKPPDDPAKSSP 366

Query: 181 -RTQELSTKNGSTNYPRPNLGFCYRRNQNGHLSNQCPQRKTVAYVEEGGSQEDEAKPNSE 240
            +T + S+K G+  Y RP LG C+R  Q  HLSN+CPQR+ +A V++    E +    +E
Sbjct: 367 FKTPDTSSKRGTNPYIRPTLGKCFRCGQVDHLSNECPQRRALALVDQDDLLETDIDLPTE 426

Query: 241 EEINELEPDEGEQLSCVIQRILLTPKTETHPRRHSLFRTRCTINGKLC-----NVIIDSG 300
           ++   +EPDEG+ LSCV+Q++L TPK E  P+R+SLFRT  TINGKL      +V  D  
Sbjct: 427 DDPTYVEPDEGDLLSCVVQKVL-TPKVEVQPQRNSLFRTCFTINGKLLIGKGDDVEGDGA 486

[Close]

BLAST of Cucsat.G17285 vs. ExPASy TrEMBL
Match: A0A5D3DGR0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00870 PE=4 SV=1)

HSP 1 Score: 255 bits (652), Expect = 1.13e-73
Identity = 145/311 (46.62%), Postives = 192/311 (61.74%), Query Frame = 0


Query: 1   MVALKLKSGASTWWDQIQANRRLIGKTPIRSWPRMLKMMKERFLPTDFEQILYQQYQQCR 60
           +VALKLK GAS WWDQI  NR+  GK PIRSW +M K+MK+RF+P ++EQ LY QYQ CR
Sbjct: 197 LVALKLKGGASAWWDQITVNRQKQGKHPIRSWEKMKKLMKQRFVPPNYEQTLYTQYQNCR 256

Query: 61  QDNRKVAEYAKEFHRLSARTQTNESENYQIGRFVDGLKENIHEQLDLQPIATLPATISMV 120
           Q  RK AEY +EFHRL  RT   E E + I  FV GL+ ++ E++ LQP   L   I+  
Sbjct: 257 QGMRKTAEYIEEFHRLGGRTNLMEGEKHLISWFVGGLRFDLKEKVKLQPFQHLSEAITYA 316

Query: 121 FKAELKLEKRQKNSDTKKNQWEKAFIPYQRKNYDNTKQAQGSGTSKAKEEQPSKTNQSPR 180
              E  +E R K+  T+K  WE +    ++    N+K    +     ++E+ S   + P 
Sbjct: 317 ETVEEMIENRAKS--TRKRPWEPSAS--KKTTAGNSKLKNATSEKPVEQEESSGKKEVPE 376

Query: 181 TQELSTKNGSTNYPRPNLGFCYRRNQNGHLSNQCPQRKTVAYVEEGGSQEDEAKPNSEEE 240
            +    K G   Y RP  G CYR  Q GH SNQCPQRKT+A  ++     + +    +EE
Sbjct: 377 GE----KKGKNPYQRPFSGNCYRCGQMGHPSNQCPQRKTIAVAKDNDDGSNRSLGEFDEE 436

Query: 241 INELEPDEGEQLSCVIQRILLTPKTETHPRRHSLFRTRCTINGKLCNVIIDSGSSESIVY 300
              +E DEG+ LSC++QR+L++PK E   +RHSLF+TRCTI GK+CNVIIDSGSSE+ V 
Sbjct: 437 TEVIEADEGDSLSCILQRVLISPKEENQLQRHSLFKTRCTIQGKVCNVIIDSGSSENFVS 496

Query: 301 SKLVQALKPQT 311
            KLV AL  +T
Sbjct: 497 KKLVTALNLKT 499

[Close]

BLAST of Cucsat.G17285 vs. ExPASy TrEMBL
Match: A0A6J1CCQ8 (uncharacterized protein LOC111009540 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009540 PE=4 SV=1)

HSP 1 Score: 239 bits (611), Expect = 1.04e-71
Identity = 133/286 (46.50%), Postives = 190/286 (66.43%), Query Frame = 0


Query: 1   MVALKLKSGASTWWDQIQANRRLIGKTPIRSWPRMLKMMKERFLPTDFEQILYQQYQQCR 60
           +VA K++SGAS WWDQ++ N R +GK PIRSWPRML++M+ERFLP +FEQ+LYQ YQ+CR
Sbjct: 187 LVAFKIQSGASAWWDQLEINCRRLGKQPIRSWPRMLRLMRERFLPPNFEQLLYQPYQRCR 246

Query: 61  QDNRKVAEYAKEFHRLSARTQTNESENYQIGRFVDGLKENIHEQLDLQPIATLPATISMV 120
           Q  + +A+Y + FHRL A+T   E+E+Y+I RFVDGL+E+I +Q+D+QPI  L   I M 
Sbjct: 247 QGFKTIADYTEAFHRLGAKTNIAETEDYKIARFVDGLREDIQDQMDIQPIHLLTDAIVMA 306

Query: 121 FKAELKLEKRQKNSDTKKNQWEKAFIPYQRKNYDNTKQAQGSGTSKAKEEQPSKTNQSP- 180
            K E   +K++  +  ++  W+K  I  +    D  K  Q   TS +  + P    +S  
Sbjct: 307 TKIE---DKKRLRTPARRTPWDKPSIS-KTATTDTGKPLQIGTTSASTTKPPDDPAKSSP 366

Query: 181 -RTQELSTKNGSTNYPRPNLGFCYRRNQNGHLSNQCPQRKTVAYVEEGGSQEDEAKPNSE 240
            +T + S+K G+  Y RP LG C+R  Q  HLSN+CPQR+ +A V++    E +    +E
Sbjct: 367 FKTPDTSSKRGTNPYIRPTLGKCFRCGQVDHLSNECPQRRALALVDQDDLLETDIDLPTE 426

Query: 241 EEINELEPDEGEQLSCVIQRILLTPKTETHPRRHSLFRTRCTINGK 284
           ++   +EPDEG+ LSCV+Q++L TPK E  P+R+SLFRT  TINGK
Sbjct: 427 DDPTYVEPDEGDLLSCVVQKVL-TPKVEVQPQRNSLFRTCFTINGK 467

[Close]

BLAST of Cucsat.G17285 vs. ExPASy TrEMBL
Match: A0A6J1CAS9 (uncharacterized protein LOC111009540 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009540 PE=4 SV=1)

HSP 1 Score: 242 bits (617), Expect = 1.51e-71
Identity = 140/307 (45.60%), Postives = 199/307 (64.82%), Query Frame = 0


Query: 1   MVALKLKSGASTWWDQIQANRRLIGKTPIRSWPRMLKMMKERFLPTDFEQILYQQYQQCR 60
           +VA K++SGAS WWDQ++ N R +GK PIRSWPRML++M+ERFLP +FEQ+LYQ YQ+CR
Sbjct: 187 LVAFKIQSGASAWWDQLEINCRRLGKQPIRSWPRMLRLMRERFLPPNFEQLLYQPYQRCR 246

Query: 61  QDNRKVAEYAKEFHRLSARTQTNESENYQIGRFVDGLKENIHEQLDLQPIATLPATISMV 120
           Q  + +A+Y + FHRL A+T   E+E+Y+I RFVDGL+E+I +Q+D+QPI  L   I M 
Sbjct: 247 QGFKTIADYTEAFHRLGAKTNIAETEDYKIARFVDGLREDIQDQMDIQPIHLLTDAIVMA 306

Query: 121 FKAELKLEKRQKNSDTKKNQWEKAFIPYQRKNYDNTKQAQGSGTSKAKEEQPSKTNQSP- 180
            K E   +K++  +  ++  W+K  I  +    D  K  Q   TS +  + P    +S  
Sbjct: 307 TKIE---DKKRLRTPARRTPWDKPSIS-KTATTDTGKPLQIGTTSASTTKPPDDPAKSSP 366

Query: 181 -RTQELSTKNGSTNYPRPNLGFCYRRNQNGHLSNQCPQRKTVAYVEEGGSQEDEAKPNSE 240
            +T + S+K G+  Y RP LG C+R  Q  HLSN+CPQR+ +A V++    E +    +E
Sbjct: 367 FKTPDTSSKRGTNPYIRPTLGKCFRCGQVDHLSNECPQRRALALVDQDDLLETDIDLPTE 426

Query: 241 EEINELEPDEGEQLSCVIQRILLTPKTETHPRRHSLFRTRCTINGKLC-----NVIIDSG 300
           ++   +EPDEG+ LSCV+Q++L TPK E  P+R+SLFRT  TINGKL      +V  D  
Sbjct: 427 DDPTYVEPDEGDLLSCVVQKVL-TPKVEVQPQRNSLFRTCFTINGKLLIGKGDDVEGDGA 486

[Close]

BLAST of Cucsat.G17285 vs. ExPASy TrEMBL
Match: A0A6P9EIQ8 (uncharacterized protein LOC108991242 OS=Juglans regia OX=51240 GN=LOC108991242 PE=4 SV=1)

HSP 1 Score: 234 bits (596), Expect = 1.56e-69
Identity = 131/315 (41.59%), Postives = 191/315 (60.63%), Query Frame = 0


Query: 1   MVALKLKSGASTWWDQIQANRRLIGKTPIRSWPRMLKMMKERFLPTDFEQILYQQYQQCR 60
           +VA KL+ GAS WW+Q Q NRR  GK P+R W +M ++M+ RFLP D+EQ+LYQQYQ CR
Sbjct: 101 LVAYKLRGGASAWWEQTQNNRRRQGKQPVRVWHKMKRLMRARFLPPDYEQLLYQQYQNCR 160

Query: 61  QDNRKVAEYAKEFHRLSARTQTNESENYQIGRFVDGLKENIHEQLDLQPIATLPATISMV 120
           Q  R + EY +EF+RL++R   +E+E  Q+ R++ GL+  I +++ L  + TL   +++ 
Sbjct: 161 QGIRSINEYTEEFYRLNSRNNLSETEGQQVARYIGGLRITIQDKVTLHTVWTLSEAVNLA 220

Query: 121 FKAELKLEKRQKNSDTKKNQWEKAFIPYQRKNYDNTKQAQGSGTSKAKEEQPSKTNQSPR 180
            K EL+L +    + +        F P  +     T+ +     S + + +     Q+P+
Sbjct: 221 MKIELQLSRPPTRTPS--------FSPTSKGTEPPTRPSLPHAPSSSHDPKTQGNYQAPK 280

Query: 181 TQELSTKN----GSTNYPRPNLGFCYRRNQNGHLSNQCPQRKTVAYVEEGGSQEDEAKPN 240
               +T N    G+  Y RP  G C+R NQ GH S +CP R++V  V+ G     E +  
Sbjct: 281 LNTTTTGNRGSTGNNPYRRPITGKCFRCNQPGHRSKECPNRRSVNMVD-GKESTKEDEEE 340

Query: 241 SEEEINELEPDEGEQLSCVIQRILLTPKTETHPRRHSLFRTRCTINGKLCNVIIDSGSSE 300
           SEEE   +E DEG+ ++C+IQR+LLTPK E H +RH +F+TRCTIN K+CN+IIDSGS E
Sbjct: 341 SEEESELVEGDEGDLVNCIIQRLLLTPKHEDHSQRHVIFKTRCTINQKVCNLIIDSGSCE 400

Query: 301 SIVYSKLVQALKPQT 311
           +IV   LV  LK  T
Sbjct: 401 NIVSRALVATLKLPT 406

[Close]

BLAST of Cucsat.G17285 vs. ExPASy TrEMBL
Match: A0A5B7BER3 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_036800 PE=4 SV=1)

HSP 1 Score: 244 bits (623), Expect = 2.67e-69
Identity = 149/331 (45.02%), Postives = 199/331 (60.12%), Query Frame = 0


Query: 1   MVALKLKSGASTWWDQIQANRRLIGKTPIRSWPRMLKMMKERFLPTDFEQILYQQYQQCR 60
           +VA KLK GAS WWDQ+Q NRR  GK P+R+W +M ++++ERFLP D+EQ+LYQQYQ CR
Sbjct: 160 LVAYKLKGGASAWWDQVQQNRRRQGKQPVRTWQKMRRLLRERFLPVDYEQVLYQQYQNCR 219

Query: 61  QDNRKVAEYAKEFHRLSARTQTNESENYQIGRFVDGLKENIHEQLDLQPIATLPATISMV 120
           Q  R V+EY++EF+ LS+R    E+EN Q+ R+V GL+  I +QL+L+ I  L    S+ 
Sbjct: 220 QGGRSVSEYSQEFNTLSSRNNLTETENQQVARYVGGLRATIQDQLNLRTIWNLNEATSLA 279

Query: 121 FKAELKLEKRQKNSDTKKNQWEKAFIPYQRKNYDNTKQAQGSGTSKAKEEQPSKTNQSPR 180
               LK+E +Q     +     +++    R   +  KQ +G         QP K   +PR
Sbjct: 280 ----LKVEAQQSRQPLRSQNSARSYPDSSRNQQNRDKQIEGVVP------QPQKI--TPR 339

Query: 181 TQELSTKNG---------STN-YPRPNLGFCYRRNQNGHLSNQCPQRKTVAYVEEGGSQE 240
            Q  S+KN          STN Y RP  G C+R  Q GH SN+CP R+ V  V   G  E
Sbjct: 340 DQASSSKNQNTPIAPSQKSTNPYARPIPGKCFRCQQPGHRSNECPNRRQVNMV---GVTE 399

Query: 241 DEAKPNSEEEINEL----------EPDEGEQLSCVIQRILLTPKTETHPRRHSLFRTRCT 300
           D +     EE  E           E DEGE +SCV+QR+LL PK E  P+RH++FRTRCT
Sbjct: 400 DNSPDFENEEEAEYQDEYGGAEITEGDEGEHVSCVVQRLLLVPKQEVDPQRHNIFRTRCT 459

Query: 301 INGKLCNVIIDSGSSESIVYSKLVQALKPQT 311
           IN K+C+VIIDSGSSE+IV   LV+AL+ +T
Sbjct: 460 INQKVCDVIIDSGSSENIVSKALVKALQLKT 475

The following BLAST results are available for this feature:

BLAST of Cucsat.G17285 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G17285 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031743026.1	2.61e-83	48.86	uncharacterized protein LOC116404533 [Cucumis sativus]	[more]
XP_031741035.1	1.73e-78	48.21	uncharacterized protein LOC116403692 [Cucumis sativus]	[more]
KAA0054966.1	2.34e-73	46.62	transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK2...	[more]
XP_022138328.1	2.15e-71	46.50	uncharacterized protein LOC111009540 isoform X2 [Momordica charantia]	[more]
XP_022138327.1	3.11e-71	45.60	uncharacterized protein LOC111009540 isoform X1 [Momordica charantia]	[more]

BLAST of Cucsat.G17285 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DGR0	1.13e-73	46.62	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A6J1CCQ8	1.04e-71	46.50	uncharacterized protein LOC111009540 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CAS9	1.51e-71	45.60	uncharacterized protein LOC111009540 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6P9EIQ8	1.56e-69	41.59	uncharacterized protein LOC108991242 OS=Juglans regia OX=51240 GN=LOC108991242 P...	[more]
A0A5B7BER3	2.67e-69	45.02	Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_036800 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 1..99 e-value: 5.1E-16 score: 58.7
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 260..311 e-value: 3.1E-5 score: 25.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..248
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..201
None	No IPR available	PANTHER	PTHR35046	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 2..311
None	No IPR available	PANTHER	PTHR35046:SF6	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 2..311
IPR001969	Aspartic peptidase, active site	PROSITE	PS00141	ASP_PROTEASE	coord: 288..299

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G17285.T1	Cucsat.G17285.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity