Cucsat.G17214 (gene) Cucumber (B10) v3

Overview
NameCucsat.G17214
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionHVA22-like protein
Locationctg27: 574483 .. 575670 (+)
RNA-Seq ExpressionCucsat.G17214
SyntenyCucsat.G17214
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GACACAAAAACAAATTTTACAGATATTCTTTGCTTTGATTCCCATTTTTTCGTCCATAAATTACACCCTTTCTTCTATGGTTTCCTTATATCAATATATTCATCATTATTATAAGTTGAAATATAATAATTATCTTTTTAGCTCGTAAAGTTTCTTCGTTTTCAAAAATGGGGTTTTTTGAAAGAGCCACCGTTCACTTTTTTCATGCAGCAATCGGGTACGTACCCGTTTTTAAATTTTGTTTCTTTCATCATCCATCATTTTTTTAAAGATATATTAATTTAAAAAATTGTGTGTGTGTGTGTGTATAAAAGTTTTAACTGATCATTAACTAATATATACTTATTTTTGTTCTACTTCACCTGCAGATCTGCCATTGTGCTTCTCTATCCACTGTATAACTTTCTATCTCTTTTTCTCTCTCCAAAAGGGCTGGAGCTAAAAATAGCTTTCTTTCTTTCTTTCTTTTAATTAGAAAAGAGGATACTTTATTTTGATCGAAAATTTTTAATTTGGCTCCGTCCCTACTTTTTTGTTACTATAATTATTATTGTTAAATTGCTGATCACATGGGAATAAGAAACAGGTATGAATCGAAATTGGCAATGGAGAAACCTTCATCTCGAGAACATCAACAATGGTTGACATACTGGGTTTTGCTTTCATGTCTCACCCTTTTCGAGCTTTATTTGTCCACCATTATTTCATGGTATGTAATAACTTCAATTATATAATAATGTTGTTTTCTGTAAGCTTTATAAACCGATAAAGTTGTTTTTTTTTTTTTTTTTCTTTTCTTGAGTTTATATTATACTAAATACGTACCCAATATCCTCCACAATCTTAGAACCAGTCGACATTATGACATAATGAAAAGAGTACGAGTACAACCATTCATGCATCTTATAATAATGATGGGATCTTTTTGCCTTTTCGATGTTATATAAATATGGTTTGATATTATATCCGTTGAACATAATTTTCTATCTCAAAACCAAATTGATAAAGAAAGATGGTACAAGGTATCTCATCCTTTTACCTTTAGTTTTGTTTATTTTAAAATTTTCCATCAAACTGTATTCCAGGACTGATATAATATAATTGGAATAAAATTTTGTTGTAGGATTCCACTGTGGCCTTATATGAAGTTGGTGTTTTGCTTGTGGTTGGCGCTGCCAAGTTTCAAGGGTGCAGCTTATGTTTTTGAGAATATTGCAACGAAATACATCAAGATTGAAAATATTGAAGAGAACCCCGAAAGAGATTTCGTGGAGGAAAAGAAAGAAAAAGAGGACACGAAGAAGAAACAAAAAGAGGACATGAAGAAGAAAGACGACCAAGACGAAGATGATGAAGACGAAGACGAAGACAGCGAGGAGGACGATTACGAGGACATGATCAAAGGCGATCAAAAGAAAGTCTTTCGTGCTTGGAAATTAGTGGATGATTACATTGAAAAAAATGGAGCTGATTCTTTAGAAAAGATTGTCAAAGCTGGTTTACAAGGTAACATGAAACACAAAACATTATAGTTCATATATTTCATATATATATAATCTCTTTAGTTTCTTGATCTTTCTCTATTTTTGGACAAAAAAATGATTACTGAACAAATTTTGCAGGCAACTGAGGCAACTAATTCACAAGCAGAAGGCAGAATGAGAGGAGGAATAATAAAAATAATTAGAGCATTTGCAATAATGTATATATGCAATATGATACACGTATACAAATAAATAATGTATGAAATATTTCTTTTATACTCCCCTTATTATACTTTGTCAAATTAGCTTAAAATTCAATCCATTTCATTTATGTGATGTAACATGTATGTATTAAAACTTTGTTAATTGGTAGTAAAATATTTATAGTAATATATTACATATATCAATTCGTACATATGTATATATATCTATATACAGAGAGAGGTCAGGAAACATCTAACTATAGATGA

Coding sequence (CDS)

ATGGGGTTTTTTGAAAGAGCCACCGTTCACTTTTTTCATGCAGCAATCGGATCTGCCATTGTGCTTCTCTATCCACTGTATGAATCGAAATTGGCAATGGAGAAACCTTCATCTCGAGAACATCAACAATGGTTGACATACTGGGTTTTGCTTTCATGTCTCACCCTTTTCGAGCTTTATTTGTCCACCATTATTTCATGGATTCCACTGTGGCCTTATATGAAGTTGGTGTTTTGCTTGTGGTTGGCGCTGCCAAGTTTCAAGGGTGCAGCTTATGTTTTTGAGAATATTGCAACGAAATACATCAAGATTGAAAATATTGAAGAGAACCCCGAAAGAGATTTCGTGGAGGAAAAGAAAGAAAAAGAGGACACGAAGAAGAAACAAAAAGAGGACATGAAGAAGAAAGACGACCAAGACGAAGATGATGAAGACGAAGACGAAGACAGCGAGGAGGACGATTACGAGGACATGATCAAAGGCGATCAAAAGAAAGTCTTTCGTGCTTGGAAATTAGTGGATGATTACATTGAAAAAAATGGAGCTGATTCTTTAGAAAAGATTGTCAAAGCTGGTTTACAAGGCAACTGA

Protein sequence

MGFFERATVHFFHAAIGSAIVLLYPLYESKLAMEKPSSREHQQWLTYWVLLSCLTLFELYLSTIISWIPLWPYMKLVFCLWLALPSFKGAAYVFENIATKYIKIENIEENPERDFVEEKKEKEDTKKKQKEDMKKKDDQDEDDEDEDEDSEEDDYEDMIKGDQKKVFRAWKLVDDYIEKNGADSLEKIVKAGLQGN
Homology
[Close]
BLAST of Cucsat.G17214 vs. NCBI nr
Match: XP_004140140.1 (HVA22-like protein f [Cucumis sativus] >KGN47992.1 hypothetical protein Csa_003845 [Cucumis sativus])

HSP 1 Score: 198 bits (503), Expect = 4.20e-62
Identity = 119/139 (85.61%), Postives = 119/139 (85.61%), Query Frame = 0 

Query: 1   ELYLSTIIS-------------------CFKGAAYVFENIATKYIKIENIEENPERDFVE 60
           ELYLSTIIS                    FKGAAYVFENIATKYIKIENIEENPERDFVE
Sbjct: 58  ELYLSTIISWIPLWPYMKLVFCLWLALPSFKGAAYVFENIATKYIKIENIEENPERDFVE 117

Query: 61  EKKEKEDTKKKQKEDMKKKDDQDEDDEDEDEDSEEDDYEDMIKGDQKKVFRAWKLVDDYI 120
           EKKEKEDTKKKQKEDMKKKDDQDEDDEDEDEDSEEDDYEDMIKGDQKKVFRAWKLVDDYI
Sbjct: 118 EKKEKEDTKKKQKEDMKKKDDQDEDDEDEDEDSEEDDYEDMIKGDQKKVFRAWKLVDDYI 177

[Close]
BLAST of Cucsat.G17214 vs. NCBI nr
Match: KAA0061674.1 (HVA22-like protein f [Cucumis melo var. makuwa] >TYK21150.1 HVA22-like protein f [Cucumis melo var. makuwa])

HSP 1 Score: 151 bits (381), Expect = 8.02e-44
Identity = 98/140 (70.00%), Postives = 107/140 (76.43%), Query Frame = 0 

Query: 1   ELYLSTIIS-------------------CFKGAAYVFENIATKYIKIENIEENPERDFVE 60
           ELYLSTIIS                    FKGAAYVFENIA KYIK+E+IEENPERD  E
Sbjct: 38  ELYLSTIISWIPLWPYIKLVFCLWLALPSFKGAAYVFENIAMKYIKVEDIEENPERDLEE 97

Query: 61  EKKEKEDTKKKQKEDMKKKDDQDED-DEDEDEDSEEDDYEDMIKGDQKKVFRAWKLVDDY 120
           EKKEKED KKK KEDMKKKDD+DE  DEDED++ +ED+ E +   D+KKVFRAWKLVDDY
Sbjct: 98  EKKEKEDMKKKAKEDMKKKDDEDEAVDEDEDDEEDEDEDEAVSTRDEKKVFRAWKLVDDY 157

[Close]
BLAST of Cucsat.G17214 vs. NCBI nr
Match: XP_008449515.1 (PREDICTED: HVA22-like protein f [Cucumis melo])

HSP 1 Score: 151 bits (381), Expect = 1.45e-43
Identity = 98/140 (70.00%), Postives = 107/140 (76.43%), Query Frame = 0 

Query: 1   ELYLSTIIS-------------------CFKGAAYVFENIATKYIKIENIEENPERDFVE 60
           ELYLSTIIS                    FKGAAYVFENIA KYIK+E+IEENPERD  E
Sbjct: 58  ELYLSTIISWIPLWPYIKLVFCLWLALPSFKGAAYVFENIAMKYIKVEDIEENPERDLEE 117

Query: 61  EKKEKEDTKKKQKEDMKKKDDQDED-DEDEDEDSEEDDYEDMIKGDQKKVFRAWKLVDDY 120
           EKKEKED KKK KEDMKKKDD+DE  DEDED++ +ED+ E +   D+KKVFRAWKLVDDY
Sbjct: 118 EKKEKEDMKKKAKEDMKKKDDEDEAVDEDEDDEEDEDEDEAVSTRDEKKVFRAWKLVDDY 177

[Close]
BLAST of Cucsat.G17214 vs. NCBI nr
Match: XP_038888450.1 (HVA22-like protein f [Benincasa hispida])

HSP 1 Score: 125 bits (314), Expect = 1.69e-33
Identity = 87/140 (62.14%), Postives = 98/140 (70.00%), Query Frame = 0 

Query: 1   ELYLSTIIS-------------------CFKGAAYVFENIATKYIKIENIEENPERDFVE 60
           ELYL+TIIS                    FKGAAYVFENIA KYIKIENIEE PE D ++
Sbjct: 58  ELYLATIISWIPLWPYIKLVFCLWLVLPSFKGAAYVFENIAMKYIKIENIEEKPEFDIMK 117

Query: 61  EKKEKEDTKKKQKEDMKKKDDQDEDD-EDEDEDSEEDDYEDMIKGDQKKVFRAWKLVDDY 120
           E+K      K ++ED+KKKDD   DD +D+DED EED+ ED   G +KKVFRAWKLVDDY
Sbjct: 118 EEK------KGKEEDVKKKDDDKTDDGKDKDEDDEEDEDEDENAGKEKKVFRAWKLVDDY 177

[Close]
BLAST of Cucsat.G17214 vs. NCBI nr
Match: XP_022989199.1 (HVA22-like protein e [Cucurbita maxima])

HSP 1 Score: 92.8 bits (229), Expect = 7.83e-21
Identity = 71/136 (52.21%), Postives = 85/136 (62.50%), Query Frame = 0 

Query: 1   ELYLSTIIS-------------------CFKGAAYVFENIATKYIKIENIEENPERDFVE 60
           ELY STIIS                    FKGAAYV+ENIA K++ IE  EE PE D V+
Sbjct: 59  ELYFSTIISWIPIWAYIKMVVCLWLMLPSFKGAAYVYENIAMKFMTIER-EEKPESDLVK 118

Query: 61  EKKEKEDTKKKQKEDMKKKDDQDEDDEDEDEDSEEDDYEDMIKGDQKKVFRAWKLVDDYI 117
           EK+++ED K+++KE  KKK           E+ EE D ED    +QKK+FRAWKLVDDYI
Sbjct: 119 EKEDRED-KEEEKEKKKKK-----------EEEEEGDEED----EQKKIFRAWKLVDDYI 177

[Close]
BLAST of Cucsat.G17214 vs. ExPASy TrEMBL
Match: A0A0A0KI03 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G423340 PE=3 SV=1)

HSP 1 Score: 198 bits (503), Expect = 2.03e-62
Identity = 119/139 (85.61%), Postives = 119/139 (85.61%), Query Frame = 0 

Query: 1   ELYLSTIIS-------------------CFKGAAYVFENIATKYIKIENIEENPERDFVE 60
           ELYLSTIIS                    FKGAAYVFENIATKYIKIENIEENPERDFVE
Sbjct: 58  ELYLSTIISWIPLWPYMKLVFCLWLALPSFKGAAYVFENIATKYIKIENIEENPERDFVE 117

Query: 61  EKKEKEDTKKKQKEDMKKKDDQDEDDEDEDEDSEEDDYEDMIKGDQKKVFRAWKLVDDYI 120
           EKKEKEDTKKKQKEDMKKKDDQDEDDEDEDEDSEEDDYEDMIKGDQKKVFRAWKLVDDYI
Sbjct: 118 EKKEKEDTKKKQKEDMKKKDDQDEDDEDEDEDSEEDDYEDMIKGDQKKVFRAWKLVDDYI 177

[Close]
BLAST of Cucsat.G17214 vs. ExPASy TrEMBL
Match: A0A5A7V335 (HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00180 PE=3 SV=1)

HSP 1 Score: 151 bits (381), Expect = 3.88e-44
Identity = 98/140 (70.00%), Postives = 107/140 (76.43%), Query Frame = 0 

Query: 1   ELYLSTIIS-------------------CFKGAAYVFENIATKYIKIENIEENPERDFVE 60
           ELYLSTIIS                    FKGAAYVFENIA KYIK+E+IEENPERD  E
Sbjct: 38  ELYLSTIISWIPLWPYIKLVFCLWLALPSFKGAAYVFENIAMKYIKVEDIEENPERDLEE 97

Query: 61  EKKEKEDTKKKQKEDMKKKDDQDED-DEDEDEDSEEDDYEDMIKGDQKKVFRAWKLVDDY 120
           EKKEKED KKK KEDMKKKDD+DE  DEDED++ +ED+ E +   D+KKVFRAWKLVDDY
Sbjct: 98  EKKEKEDMKKKAKEDMKKKDDEDEAVDEDEDDEEDEDEDEAVSTRDEKKVFRAWKLVDDY 157

[Close]
BLAST of Cucsat.G17214 vs. ExPASy TrEMBL
Match: A0A1S3BM74 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103491378 PE=3 SV=1)

HSP 1 Score: 151 bits (381), Expect = 7.04e-44
Identity = 98/140 (70.00%), Postives = 107/140 (76.43%), Query Frame = 0 

Query: 1   ELYLSTIIS-------------------CFKGAAYVFENIATKYIKIENIEENPERDFVE 60
           ELYLSTIIS                    FKGAAYVFENIA KYIK+E+IEENPERD  E
Sbjct: 58  ELYLSTIISWIPLWPYIKLVFCLWLALPSFKGAAYVFENIAMKYIKVEDIEENPERDLEE 117

Query: 61  EKKEKEDTKKKQKEDMKKKDDQDED-DEDEDEDSEEDDYEDMIKGDQKKVFRAWKLVDDY 120
           EKKEKED KKK KEDMKKKDD+DE  DEDED++ +ED+ E +   D+KKVFRAWKLVDDY
Sbjct: 118 EKKEKEDMKKKAKEDMKKKDDEDEAVDEDEDDEEDEDEDEAVSTRDEKKVFRAWKLVDDY 177

[Close]
BLAST of Cucsat.G17214 vs. ExPASy TrEMBL
Match: A0A6J1JNP5 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486344 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.79e-21
Identity = 71/136 (52.21%), Postives = 85/136 (62.50%), Query Frame = 0 

Query: 1   ELYLSTIIS-------------------CFKGAAYVFENIATKYIKIENIEENPERDFVE 60
           ELY STIIS                    FKGAAYV+ENIA K++ IE  EE PE D V+
Sbjct: 59  ELYFSTIISWIPIWAYIKMVVCLWLMLPSFKGAAYVYENIAMKFMTIER-EEKPESDLVK 118

Query: 61  EKKEKEDTKKKQKEDMKKKDDQDEDDEDEDEDSEEDDYEDMIKGDQKKVFRAWKLVDDYI 117
           EK+++ED K+++KE  KKK           E+ EE D ED    +QKK+FRAWKLVDDYI
Sbjct: 119 EKEDRED-KEEEKEKKKKK-----------EEEEEGDEED----EQKKIFRAWKLVDDYI 177

[Close]
BLAST of Cucsat.G17214 vs. ExPASy TrEMBL
Match: A0A6J1ERA1 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111437083 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 7.56e-20
Identity = 72/145 (49.66%), Postives = 89/145 (61.38%), Query Frame = 0 

Query: 1   ELYLSTIIS-------------------CFKGAAYVFENIATKYIKIENIEENPERDFVE 60
           ELY STIIS                    FKGAAYV+E+IATK++ IE  EE PE D +E
Sbjct: 59  ELYFSTIISWIPIWAYIKMVVCLWLMLPSFKGAAYVYEHIATKFMTIER-EEKPESD-LE 118

Query: 61  EKKEKEDTKKKQKEDM---------KKKDDQDEDDEDEDEDSEEDDYEDMIKGDQKKVFR 117
           ++KEKE  K+K+KED          KKK++++E+DE+EDE              QKK+FR
Sbjct: 119 KEKEKEKEKEKEKEDKEEEKEKEKKKKKEEEEEEDEEEDE--------------QKKIFR 178

The following BLAST results are available for this feature:
BLAST of Cucsat.G17214 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G17214 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140140.14.20e-6285.61HVA22-like protein f [Cucumis sativus] >KGN47992.1 hypothetical protein Csa_0038... [more]
KAA0061674.18.02e-4470.00HVA22-like protein f [Cucumis melo var. makuwa] >TYK21150.1 HVA22-like protein f... [more]
XP_008449515.11.45e-4370.00PREDICTED: HVA22-like protein f [Cucumis melo][more]
XP_038888450.11.69e-3362.14HVA22-like protein f [Benincasa hispida][more]
XP_022989199.17.83e-2152.21HVA22-like protein e [Cucurbita maxima][more]
BLAST of Cucsat.G17214 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KI032.03e-6285.61HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G423340 PE=3 SV=1[more]
A0A5A7V3353.88e-4470.00HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860... [more]
A0A1S3BM747.04e-4470.00HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103491378 PE=3 SV=1[more]
A0A6J1JNP53.79e-2152.21HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486344 PE=3 SV=1[more]
A0A6J1ERA17.56e-2049.66HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111437083 PE=3 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 96..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..139
NoneNo IPR availablePANTHERPTHR12300:SF99HVA22-LIKE PROTEIN Fcoord: 8..171
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..33
score: 6.0
IPR004345TB2/DP1/HVA22-related proteinPFAMPF03134TB2_DP1_HVA22coord: 7..79
e-value: 1.7E-22
score: 79.1
IPR004345TB2/DP1/HVA22-related proteinPANTHERPTHR12300HVA22-LIKE PROTEINScoord: 8..171

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G17214.T1Cucsat.G17214.T1mRNA
Cucsat.G17214.T2Cucsat.G17214.T2mRNA
Cucsat.G17214.T3Cucsat.G17214.T3mRNA
Cucsat.G17214.T5Cucsat.G17214.T5mRNA
Cucsat.G17214.T4Cucsat.G17214.T4mRNA
Cucsat.G17214.T6Cucsat.G17214.T6mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane