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Cucsat.G17182 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAACTATTAAAAAGAAAGAAGTAGAAGAGAAAGCAAAAAAGAAAAAAAAAAGGGAAAAGATTTAGCATGCGGAAGCGCAATGTCCATTGTCCACCCTTCCAGTTCTAGCCTGCCTTCTAGACCTCTACCCCTTCTTTCTTCTTCTTCTTCTTCTTCTCTCTATTGTAATTTGGTTTTCCATTAATGGACAGTGATAAATCAAAATTCTATTTCGGCCCTCCGATCAATCCCTCCTGTTCTTCCCTTCTCCTTCTCTTCATCTTCCTCGCTATCCTCACCTTCCAAATCGCCACCAGAACTCCCCCTTTCCCCTTCTGGCTCCCACCCTCTGATTTCCAACTCCCCACCTGCTCCGCCTTCTTCCGCCCAGATGCTACGGCGGGGGTTGTCATGTCGATCACGGATTTCGGAGGAGTAGGGGACGGAAAGACTTCCAACACGGAAGCGTTTCGGAAGGCCATTCAGTACATGCGGCGGTTCGGCGACAAAGGCGGGTCTAAACTGACCGTCCCTAAGGGCAGTTGGGTCACGGGCAGCTTTAATCTCACCAGTAATTTTACCCTCTTTCTCCAACGTGGCGCTCTTATTTTAGCCTCCCAGGTCAGTTTTTTTCTTTTTTACCCTAAACCCCTAAAATTACTTACGGTTAAACTAAATAGTTATTAGAAAATTAAATGGTAATTTTAAGCTTGTCTTTTGTAATTTGTTTTTTTGTTTTAAATATTTATGTGTTTAAGACTTTGTGTGGTGTTTCTTTTAAACTGTTGGGGAATTTTATTTTTATTGTTTTAATGAGTTTGGAAAGGACAAATTCTTTGTGATTTTGGTGAAGAAGAAAATGACAAATGGGATTTCATAACTTAGCAGAAAAGGTAAAATCAGAGTGATGACTCTGGCGGTGTCACCTAAGTTCTTATTGCATTTTTAAACCTAAAAACATAGCAAGTGGGATCCACCATATTTATATATATATATATCCAATATTTCCATCCAAATTGATTAAATAATAATAAGATAATAAATATTTTTGCATGCAAGAAAAATGTAATATCTGAACTTATTTATAGTGAAAATGTGAATTGATAATAATATTATTTTTTAAAGAAAAAAAAAAGCAATAAAACAAGTAAAGTTGTATGTAACCAAAAAAGTAATGATAATAAATAATAATAAAGCAGTGAAATTATGAGAAAAAAAGGTTGTATATGCTAATGATTTATTGGCACTATGAATTATCATTTAATGCATTCATTAGTGCTTTTGAAGCTAATTTATATTAGTGTTTGGGATTTCCCATTAACAAAATTCCTTAGAAAAAATAAAATAAAATTAAAGTGTGATTCCTTCCCCCAAGGTGTGTAAATGAAACAGAGCTTTTATGATAACTGGTTGACTTTTTTTTTTTTGTTGGGTATTATTTGAAACTGAATAAGCTTTGGTTTGATCAGTAAAATAAATTATCAAATCAAATTTGTTAATTATGAATTGATAAATCTTTGCTTTTAGAAATCATGGTGGCATGTTATTGTCAAAAGTTTAGTGTGCACTTGATTAAATATTTGTTTGAAATTAAAAAAAAAAAAAAAAGGATCCAGATGAGTGGCCCATTATAGAGCCACTTCCTTCTTATGGAAGAGGAAGAGAGAGATTGGGAGGAAGACACATCAGCCTTATTCATGGCAATGCCCTTTCAAATGTTGTAATTACAGGTGCTTTCACTTTTCTTTATCTTTTTTTGTTTTTTTTTTGTTTTTGTTTTTGGCTTCATCTTCATTGCTAGGATTTTATATTCATGAGGATTCTTATCTTGGGTTTTGTAAAGTAATGGAATCAAACTTTGATCATGACTAAGCAATTAGCTAGGGAACCATGATAATGTTAAAAATTAAAAAAAGGGATTTAGGATCTAAGAATATTATTTCTCTCTCTCAAGATATCATGCTTTATTTTCTATGGTGTGTTTTTATGTTTGGGGTGGGAATGATAAAGAACTGAATCTTGGTATACCATTTCAACTGTTTTTAAAAGTGAAATTGGCAATAAGGAGTTTTTTTTGTAAGGGCACTTGACCTTTTAGTACATTTTGGTTGTGGAGAAGATCATTATAGTATTTTATGTTAAGGGGTCACTTGAGATGAGAAAAGTTAGGTATTTCAATTTTAAGCTTAAGATCTACCTTCTAAGACTAACTTGACTTACCCATTTTCTTTCTTTGATTTTCTTGTTTTTTACCCTAGCCAAATACCACTAGGTCACCAATGTGATCAGTATAGCTCATTTAGTTAAAACATATATAAATTTGACCAAAATGTCATATGTTTGAAACTCACCGTTACATATTGTTGAACTAAAAAGAATATGAGTAGAGTCCAGTGATAAAAACTAGGAATAAGAAGTTCTACCTACCTTAAAAAAAGTATCAAATGGGATCATATCTTTTGATCTACATTAGCTTTGTGCATCGAAACTGGAACTAGTGTGAACTCTTCTTCTCATTTAGCTTTGACGGCACTCGGGTTCGAGAATGTTCTTAATCATGAAAATCTATTGAGTTTTTATGTTGTTTTTTCAGGAGAGAATGGAACCATTGATGGGCAAGGCAAGATGTGGTGGGAGCTTTGGTGGAATAGAACATTAAATCACACAAGGGGCCATCTTGTAGAGCTCATCAACTCTCACAATATTCTCATTTCCAATCTCACCTTCAAAAATTCCCCCTTTTGGACAATTCATCCTGTCTATTGCAGGTTTCATTTTCAATAATTATCTACTCTTTGCAATTATATACTGGTTCTTGAACTTTTGTTTGATTTCAGCAATGTTGTTATCAAAGACATGACGATCTTGGCTCCGCTCAATGCCCCGAACACAGATGGTATCGATCCAGGTATTTTGCTTCTTTCTTGGAGCTAGGAGGTATGAGAAATAAATGTAAAACAATGCTGGAGTTATCTAAATTCCAAATGCATCTTTATTATGGTGTAGATTCTAGTACCAATGTTTGTATCGAGGACTGTTATATCGAAAGCGGAGATGATCTAGTAGCAGTGAAGAGTGGTTGGGATCAATATGGAATCAACCTTGCACGCCCAAGCTCAAATATCGTCATAAGGCGAGTTTCTGGCACCACCCCTACCTGTTCTGGTGTTGGAATAGGAAGTGAGATGTCAGGTGGAATATCAAACATTACAATTGAGGATTTAAACGTCTGGGATTCGGCAGCAGGCATTCGAATCAAATCCGACCAAGGTAGAGGAGGATACATTGCAAATGTTAGTATAACTAACTTTGTAATGAACAGAGTGAAAATGGCTATAAGGTTTAGCAGGGGCTCAAATGACCATCCTGATGAACAATTTGATCCAAAGGCAGTTCCTAAAGTGAAGGGCATTTTCATTACCAATCTCATGAGCTTAAATTCGACAAAGGCTCCGGTTCTTTACGGGATTGCAGGCACATCATATGACGGTGTATGTATGAAAAATGTGACCATTCTCGGTCTCACTCCCTCCGCAAAATGGCATTGTGCTTTTGTCTCGGGTTTTAGCACTTCAGTCTTTCCTACACCATGTCCTCAGTTGCAGAACACCACATTTTCGTCGTTGTGCTCGTCATTTTAAATGATATGAAGCCGTGCTTGGAGTAGTTGTGTGATTCCTAGATAGAGCGTTGCTAGCCTAGACAGACATGAGTTATACTGATGATCGGTGTAAGTTTTTTTATAGAGAGAAAAGGGTCTGGTCTTATTTAAGAAACCACACACATATTTTTTTTGTTGTTGCCTTTCTTGGTTTCTTATGTTCAAATGAAACCAATTATCAACATTTTGGCAACTGACCCAACAATAGGATCTATTGTACAAAGTGAGGGACGATATTTGTATTATTTTAACATTTGATCATTATTTTTATTTATTTACTTGGAAATAAGAAGAAAGTGAGGTCCCATTTGCTATGGTATCAATTCTGTATTGTATGGTAAGTTTAAAAACAATTAAATCAAGTAAATATATAAA ATGGACAGTGATAAATCAAAATTCTATTTCGGCCCTCCGATCAATCCCTCCTGTTCTTCCCTTCTCCTTCTCTTCATCTTCCTCGCTATCCTCACCTTCCAAATCGCCACCAGAACTCCCCCTTTCCCCTTCTGGCTCCCACCCTCTGATTTCCAACTCCCCACCTGCTCCGCCTTCTTCCGCCCAGATGCTACGGCGGGGGTTGTCATGTCGATCACGGATTTCGGAGGAGTAGGGGACGGAAAGACTTCCAACACGGAAGCGTTTCGGAAGGCCATTCAGTACATGCGGCGGTTCGGCGACAAAGGCGGGTCTAAACTGACCGTCCCTAAGGGCAGTTGGGTCACGGGCAGCTTTAATCTCACCAGTAATTTTACCCTCTTTCTCCAACGTGGCGCTCTTATTTTAGCCTCCCAGGATCCAGATGAGTGGCCCATTATAGAGCCACTTCCTTCTTATGGAAGAGGAAGAGAGAGATTGGGAGGAAGACACATCAGCCTTATTCATGGCAATGCCCTTTCAAATGTTGTAATTACAGGAGAGAATGGAACCATTGATGGGCAAGGCAAGATGTGGTGGGAGCTTTGGTGGAATAGAACATTAAATCACACAAGGGGCCATCTTGTAGAGCTCATCAACTCTCACAATATTCTCATTTCCAATCTCACCTTCAAAAATTCCCCCTTTTGGACAATTCATCCTGTCTATTGCAGGTTTCATTTTCAATAA MDSDKSKFYFGPPINPSCSSLLLLFIFLAILTFQIATRTPPFPFWLPPSDFQLPTCSAFFRPDATAGVVMSITDFGGVGDGKTSNTEAFRKAIQYMRRFGDKGGSKLTVPKGSWVTGSFNLTSNFTLFLQRGALILASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNALSNVVITGENGTIDGQGKMWWELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPVYCRFHFQ Homology
BLAST of Cucsat.G17182 vs. ExPASy Swiss-Prot
Match: A7PZL3 (Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 6.0e-52 Identity = 107/237 (45.15%), Postives = 149/237 (62.87%), Query Frame = 0
BLAST of Cucsat.G17182 vs. ExPASy Swiss-Prot
Match: P27644 (Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.4e-13 Identity = 47/131 (35.88%), Postives = 78/131 (59.54%), Query Frame = 0
BLAST of Cucsat.G17182 vs. ExPASy Swiss-Prot
Match: P18192 (Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 9.3e-13 Identity = 69/210 (32.86%), Postives = 97/210 (46.19%), Query Frame = 0
BLAST of Cucsat.G17182 vs. ExPASy Swiss-Prot
Match: P20041 (Polygalacturonase OS=Ralstonia solanacearum OX=305 GN=pglA PE=1 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 9.3e-13 Identity = 57/169 (33.73%), Postives = 77/169 (45.56%), Query Frame = 0
BLAST of Cucsat.G17182 vs. ExPASy Swiss-Prot
Match: P58598 (Polygalacturonase OS=Ralstonia solanacearum (strain GMI1000) OX=267608 GN=pglA PE=3 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.2e-12 Identity = 58/178 (32.58%), Postives = 76/178 (42.70%), Query Frame = 0
BLAST of Cucsat.G17182 vs. NCBI nr
Match: XP_004147365.1 (probable polygalacturonase [Cucumis sativus] >KGN62200.1 hypothetical protein Csa_016932 [Cucumis sativus]) HSP 1 Score: 474 bits (1221), Expect = 4.10e-165 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
BLAST of Cucsat.G17182 vs. NCBI nr
Match: TYK02072.1 (putative polygalacturonase [Cucumis melo var. makuwa]) HSP 1 Score: 464 bits (1195), Expect = 1.13e-163 Identity = 230/234 (98.29%), Postives = 230/234 (98.29%), Query Frame = 0
BLAST of Cucsat.G17182 vs. NCBI nr
Match: KAA0040757.1 (putative polygalacturonase [Cucumis melo var. makuwa]) HSP 1 Score: 464 bits (1195), Expect = 3.66e-161 Identity = 230/234 (98.29%), Postives = 230/234 (98.29%), Query Frame = 0
BLAST of Cucsat.G17182 vs. NCBI nr
Match: XP_008460889.1 (PREDICTED: probable polygalacturonase [Cucumis melo]) HSP 1 Score: 464 bits (1195), Expect = 1.45e-160 Identity = 230/234 (98.29%), Postives = 230/234 (98.29%), Query Frame = 0
BLAST of Cucsat.G17182 vs. NCBI nr
Match: XP_038900759.1 (probable polygalacturonase [Benincasa hispida]) HSP 1 Score: 447 bits (1151), Expect = 1.76e-154 Identity = 219/232 (94.40%), Postives = 226/232 (97.41%), Query Frame = 0
BLAST of Cucsat.G17182 vs. ExPASy TrEMBL
Match: A0A0A0LJW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G334510 PE=3 SV=1) HSP 1 Score: 474 bits (1221), Expect = 1.99e-165 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
BLAST of Cucsat.G17182 vs. ExPASy TrEMBL
Match: A0A5D3BTE0 (Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00570 PE=3 SV=1) HSP 1 Score: 464 bits (1195), Expect = 5.49e-164 Identity = 230/234 (98.29%), Postives = 230/234 (98.29%), Query Frame = 0
BLAST of Cucsat.G17182 vs. ExPASy TrEMBL
Match: A0A5A7TGP3 (Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold703G00210 PE=3 SV=1) HSP 1 Score: 464 bits (1195), Expect = 1.77e-161 Identity = 230/234 (98.29%), Postives = 230/234 (98.29%), Query Frame = 0
BLAST of Cucsat.G17182 vs. ExPASy TrEMBL
Match: A0A1S3CDX7 (probable polygalacturonase OS=Cucumis melo OX=3656 GN=LOC103499630 PE=3 SV=1) HSP 1 Score: 464 bits (1195), Expect = 7.01e-161 Identity = 230/234 (98.29%), Postives = 230/234 (98.29%), Query Frame = 0
BLAST of Cucsat.G17182 vs. ExPASy TrEMBL
Match: A0A6J1G526 (probable polygalacturonase OS=Cucurbita moschata OX=3662 GN=LOC111450990 PE=3 SV=1) HSP 1 Score: 434 bits (1117), Expect = 1.28e-149 Identity = 208/232 (89.66%), Postives = 224/232 (96.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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