Cucsat.G16623 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G16623
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	PPPDE domain-containing protein
Location	ctg24: 1811950 .. 1814898 (+)
RNA-Seq Expression	Cucsat.G16623
Synteny	Cucsat.G16623

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAGGTATGTAATTAAATGTAAATATAGGGAAGTTTAGGGACGATAATGTAAAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGTTGAAAGAATAGAAAGAAAAGAAAAAAGACAAAGTCCTAAATTTATTGAAGAAATGGAGTTTGTGGTGTTACAAGAACTGGTGGCACCCACTTGAATGAATCAGAAGATTCCCATTTCCCAATCCCCACTTTAAAAAACTATAAACTTTGTTAATAATCAAGAAAGTTATGATTACCCATTAATTATTTTTTTTCCTTTTTATGTTTCCGATGATCATTTTCTATTGGTTCGAAGATTATTTAGCAATGGAGTTATTAGTTTCAGTAAGTTAGTGGAAGTGAGATCGAAATGTTGTGCAGAAGAATCTCCAGCAATGCTGATTCTGGATCAGCTCCAGTGTACCTCAATGTGTACGATCTCACCCCCATTAATGGCTATGCATATTGGTTCGGCCTCGGTGTTTATCATTCTGGTCTTCAAGGTTTGTTCTTCTACTAATTCATCGCTTTCTCTGCTGTTTAGATCTGCATTTCTGTTGCTTAATCTGGATTTGGTAATTGTTGAATGACGAGTCCAGTTTTTATGAGTTATGTTTTCTGTTTGGTTAGTGAGGGAAACAGGGGGGAAATTTGAATGTAATTCTAGGTTTTTGCTTTATGCATCATTGTTTGTTGTTCTCTTACTCTTGTAGAATTTTAATTGGTTCTGTTTGGGTGGGGAGAAAATGATGGAAAAATAGATGAACTTACTAGGTTTTTGGTTTTACTTCACTTTTTTTTCATTGTTCTTTAAGTATAATTTGCTCCTGCTGATTTCTGGACCTGCATTTCGACATTCTGTTTGGATGGTGAGAAAATGATGGGAAATTAGACGAACTTCTAGGTTTTTACCCTTAGTTCACTTAATTTGTTTGTTCTTTAAGTATAATTTGCTCTAAGACAAACTTTCCAATTGTTATCTGGATCTCCACTGCGAGGGATTCTCTGTCTGGCTGGTGAGAAAATGGAGGAAAATTGGATAAACTTGAAGGGATTTTCATTTTACCTTTTACCTTTGTTCTTGAACTATAACTTTCCTTTTGGAAAATCTTCCCTAGTGTTTGGGTGTTGTTGAGAAAATTAAGGGAAATTGAAACATTTTCTATCTGAAACACTAAATGTTATGGGATTATTGTAATGCAGTTCATGGAATTGAATTTGCATTTGGAGCTCATGAATATCCAAGTACAGGGATATTTGAAGGAGAACCAAAGCAATGTGAAGGATTCAAGTTCAGAAAATCAATTTTGATTGGGCAAACAGACTTGAGTGAAGCAGAAGTGAAGTCATTAATGGAAGAACTTGGTAAAGACTACAGAGGAAATGCTTATAATTTAATCACAAAAAATTGCAACCATTTTTGCAACCATGTTTGCATCAAGCTCACTGGAAATCCCATCCCAAGTTGGGTCAATCGCCTTGCTAGAATTGGTAACATCAAATCCCACCCTTCATTTCCACTTTTCATCTAAATTGACATCTCCTTTTTCACTTCTTGCTGTTTTCTTTTTCTTTTTTCTTTTTCCTGTTTATGTCTCTGAATGCTGATGTTGAACTTTAGTGCTTTTGTATTTCTCTACTTTTAAATATTTTATTATCAGTCCCCACAACTTTTACATTAACCTCTTTATTAATTTAATAAAGGTCAAAATAATCATTCTTATACTTCAACTTAACTAAATTTTTCATGCAAATACATAAAAAATGATATTTGAGACCTTTAGTAAATTATTTAGAAAACATTGAATGTGTTAACCAAATTATAAAACTAAAAAGCTACTATAATCTTTTTCCCTCTGCTTGAAATTTGGAAACATGAATAACAACAAGACTACTGATATTATGTAGATTGTTAACCAATAGAATACTTGTTTTTAATCATTTTAAATTAATTTAGTATTTGGTATTACGCTTTTCAAATTCAATTTTCATATAATCAAAATTGATTTTGGACTATAAAAGCATGTTTCATATTGATTTGAAATGCAGGGTGGATTTGCAACTGTGTGTTACCAGCAACATTGAACTCCACAAAATTTGGTCAAAACAGAGTTCAAAAGAAAACAAATGAAGAAAAGCAAGAAAAAGGAGTAGAAGAAGAAGAAGAGAAGAAGAAGAAGGAATTGATGCCAAAAGTTCAAACGGTTGAAATTTCAGGTTCTAATTCTAATTCCTCTTCTTCTTCTTCGTCTTCTCCAATTACTCTCCGCAGAGGCAGAAGCAGAACAAGACGCCCTCGCCTTCCAACTTCACCATTAATTCCCACCTCAAATTGTTGAAGATCATCAGTAGTTTGGTTAAATTGCATATTTAGTCACCATAGGTCGAAAAAAGTTAGAATTTAGTCCGTTAGAGTTTAAAACTTATGGACTAACTTTTAACTTTCTTCGAATGAAGGGATTAAGTTTGTCATTTAATCTTTGAGTCGTTAGTTGCTCCTCGTTTTCTCTCACAACAAAGGAAAGAAAGAAGAACATTTTTGGGGTATATGAGTGATTATGTAAATTGTGTACTATTAGGGAAAGTGGGTTGTTTGTCCCTCAAATGTTTTCTTTTTCCACCATTTATGTATCCATTTTCTTGGATGTTGTTGAGCTACCATTGAAGTGGTAATTATAGGCTGAGATGTGGATTGTAATCCAAATTAAATTTGCAAATATGGCCCAATGGGAATGCTTTCTAGAGGGGTCAATTGCTTTTTCTTCAAGGCTAAGTACAATTTTGATTAATGCCCTAAAGATTTGTTCTATTTCATTTCTAAAAGTTTCACAAATGTTATATTCATAATTTAGCTTATGCACTTAAGCATTAGTTGGGTGCATCGGACATGGACTTATTTCTAAACATTCCACTTTCATCACACGCAAAAATAAATAAACAAAAAA

Coding sequence (CDS)

ATGTTGTGCAGAAGAATCTCCAGCAATGCTGATTCTGGATCAGCTCCAGTGTACCTCAATGTGTACGATCTCACCCCCATTAATGGCTATGCATATTGGTTCGGCCTCGGTGTTTATCATTCTGGTCTTCAAGTTCATGGAATTGAATTTGCATTTGGAGCTCATGAATATCCAAGTACAGGGATATTTGAAGGAGAACCAAAGCAATGTGAAGGATTCAAGTTCAGAAAATCAATTTTGATTGGGCAAACAGACTTGAGTGAAGCAGAAGTGAAGTCATTAATGGAAGAACTTGGTAAAGACTACAGAGGAAATGCTTATAATTTAATCACAAAAAATTGCAACCATTTTTGCAACCATGTTTGCATCAAGCTCACTGGAAATCCCATCCCAAGTTGGGTCAATCGCCTTGCTAGAATTGGGTGGATTTGCAACTGTGTGTTACCAGCAACATTGAACTCCACAAAATTTGGTCAAAACAGAGTTCAAAAGAAAACAAATGAAGAAAAGCAAGAAAAAGGAGTAGAAGAAGAAGAAGAGAAGAAGAAGAAGGAATTGATGCCAAAAGTTCAAACGGTTGAAATTTCAGGTTCTAATTCTAATTCCTCTTCTTCTTCTTCGTCTTCTCCAATTACTCTCCGCAGAGGCAGAAGCAGAACAAGACGCCCTCGCCTTCCAACTTCACCATTAATTCCCACCTCAAATTGTTGA

Protein sequence

MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPSTGIFEGEPKQCEGFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNHVCIKLTGNPIPSWVNRLARIGWICNCVLPATLNSTKFGQNRVQKKTNEEKQEKGVEEEEEKKKKELMPKVQTVEISGSNSNSSSSSSSSPITLRRGRSRTRRPRLPTSPLIPTSNC

Homology

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BLAST of Cucsat.G16623 vs. ExPASy Swiss-Prot
Match: Q93VG8 (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 4.2e-50
Identity = 87/193 (45.08%), Postives = 131/193 (67.88%), Query Frame = 0


Query: 5   RISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPSTGIFE 64
           R  S+ ++   PVYLNVYDLTP+N Y YWFG+G++HSG++ H +E+ +GAHEYP++G++E
Sbjct: 16  RDESSGEAALTPVYLNVYDLTPVNNYLYWFGIGIFHSGIEAHNLEYCYGAHEYPTSGVYE 75

Query: 65  GEPKQCEGFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNHVCIK 124
            EP+ C GF FR+S+L+G T +S ++ +S ME+L + Y G+ Y+LI KNCNHF   VC++
Sbjct: 76  VEPRNCPGFIFRRSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFTEEVCLQ 135

Query: 125 LTGNPIPSWVNRLARIGWICNCVLPATLNSTKFG--QNRVQKKTNEEKQEKGVEEEEEKK 184
           LTG PIP W+NRLAR+G  CNC+LP ++  T       R++    +E   +     +E+ 
Sbjct: 136 LTGKPIPGWINRLARVGSFCNCLLPESIQLTAVSALPERLEFSDEDESNSEASSVSDEEG 195

Query: 185 KKELMPKVQTVEI 196
            ++ +  V   EI
Sbjct: 196 SEQHLINVADREI 208

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BLAST of Cucsat.G16623 vs. ExPASy Swiss-Prot
Match: Q5PQ09 (Deubiquitinase DESI2 OS=Xenopus laevis OX=8355 GN=desi2 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.7e-31
Identity = 72/168 (42.86%), Postives = 105/168 (62.50%), Query Frame = 0


Query: 16  PVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPSTGIFEGEPKQC----E 75
           P+ LNVYD+  IN Y    G+GV+HSG+QV+G EFA+G H YP +G+FE  P       +
Sbjct: 5   PIILNVYDMYWINEYTSSLGIGVFHSGIQVYGREFAYGGHPYPFSGVFEISPGDSTELGD 64

Query: 76  GFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNHVCIKLTGNPIP 135
            FKF+++I +G TD +E +++ ++EELGK+Y+GNAY+L+ KNCNHF + +   L G  IP
Sbjct: 65  TFKFKEAIALGSTDFTENDIEKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIP 124

Query: 136 SWVNRLARIGWICNCVLPATLNSTKFGQNRVQKKTNEEKQEKGVEEEE 180
            WVNRLA     C   L + L         +Q   ++E Q++  E E+
Sbjct: 125 RWVNRLAYFS-TCVPFLQSCLPKEWLTPAALQSSISQELQDELEEAED 171

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BLAST of Cucsat.G16623 vs. ExPASy Swiss-Prot
Match: Q6DC39 (Deubiquitinase DESI2 OS=Danio rerio OX=7955 GN=desi2 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.7e-30
Identity = 73/170 (42.94%), Postives = 108/170 (63.53%), Query Frame = 0


Query: 16  PVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPSTGIFEGEPKQC----E 75
           PV LNVYD+  IN +    G+GV+HSG++++G EFA+G H YP +GIFE  P       E
Sbjct: 5   PVILNVYDMYWINEFTSSLGIGVFHSGIEIYGREFAYGGHPYPFSGIFEITPGDATELGE 64

Query: 76  GFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNHVCIKLTGNPIP 135
            FKF+++I++G TD +E +V+ ++EE+GK+Y+GNAY+L+ KNCNHF + +   L G  IP
Sbjct: 65  TFKFKEAIVLGSTDFTEEDVERIVEEMGKEYKGNAYHLMHKNCNHFSSALSEILCGREIP 124

Query: 136 SWVNRLARIGWICNCV--LPATLNSTKFGQNRVQKKTNEEKQEKGVEEEE 180
            WVNRLA   +  +CV  L + L         +Q   ++E Q +  E E+
Sbjct: 125 RWVNRLA---YFSSCVPFLQSCLPKEWLTPAALQSSVSQELQGELEEAED 171

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BLAST of Cucsat.G16623 vs. ExPASy Swiss-Prot
Match: Q9BSY9 (Deubiquitinase DESI2 OS=Homo sapiens OX=9606 GN=DESI2 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 8.2e-30
Identity = 70/169 (41.42%), Postives = 107/169 (63.31%), Query Frame = 0


Query: 17  VYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPSTGIFEGEPKQC----EG 76
           V LNVYD+  +N Y    G+GV+HSG++V+G EFA+G H YP +GIFE  P       E 
Sbjct: 7   VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66

Query: 77  FKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNHVCIKLTGNPIPS 136
           FKF++++++G TD  E +++ ++EELGK+Y+GNAY+L+ KNCNHF + +   L G  IP 
Sbjct: 67  FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126

Query: 137 WVNRLARIGWICNCV--LPATLNSTKFGQNRVQKKTNEEKQEKGVEEEE 180
           W+NRLA   +  +C+  L + L         +Q   ++E Q++  E E+
Sbjct: 127 WINRLA---YFSSCIPFLQSCLPKEWLTPAALQSSVSQELQDELEEAED 172

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BLAST of Cucsat.G16623 vs. ExPASy Swiss-Prot
Match: A3QRX8 (Deubiquitinase DESI2 OS=Sus scrofa OX=9823 GN=DESI2 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 8.2e-30
Identity = 70/169 (41.42%), Postives = 107/169 (63.31%), Query Frame = 0


Query: 17  VYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPSTGIFEGEPKQC----EG 76
           V LNVYD+  +N Y    G+GV+HSG++V+G EFA+G H YP +GIFE  P       E 
Sbjct: 7   VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66

Query: 77  FKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNHVCIKLTGNPIPS 136
           FKF++++++G TD  E +++ ++EELGK+Y+GNAY+L+ KNCNHF + +   L G  IP 
Sbjct: 67  FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126

Query: 137 WVNRLARIGWICNCV--LPATLNSTKFGQNRVQKKTNEEKQEKGVEEEE 180
           W+NRLA   +  +C+  L + L         +Q   ++E Q++  E E+
Sbjct: 127 WINRLA---YFSSCIPFLQSCLPKEWLTPAALQSSVSQELQDELEEAED 172

[Close]

BLAST of Cucsat.G16623 vs. NCBI nr
Match: XP_004152173.1 (deSI-like protein At4g17486 [Cucumis sativus] >KGN52942.1 hypothetical protein Csa_015067 [Cucumis sativus])

HSP 1 Score: 465 bits (1196), Expect = 4.97e-165
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST
Sbjct: 1   MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60

Query: 61  GIFEGEPKQCEGFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQCEGFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH
Sbjct: 61  GIFEGEPKQCEGFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH 120

Query: 121 VCIKLTGNPIPSWVNRLARIGWICNCVLPATLNSTKFGQNRVQKKTNEEKQEKGVEEEEE 180
           VCIKLTGNPIPSWVNRLARIGWICNCVLPATLNSTKFGQNRVQKKTNEEKQEKGVEEEEE
Sbjct: 121 VCIKLTGNPIPSWVNRLARIGWICNCVLPATLNSTKFGQNRVQKKTNEEKQEKGVEEEEE 180

Query: 181 KKKKELMPKVQTVEISGSNSNSSSSSSSSPITLRRGRSRTRRPRLPTSPLIPTSNC 236
           KKKKELMPKVQTVEISGSNSNSSSSSSSSPITLRRGRSRTRRPRLPTSPLIPTSNC
Sbjct: 181 KKKKELMPKVQTVEISGSNSNSSSSSSSSPITLRRGRSRTRRPRLPTSPLIPTSNC 236

[Close]

BLAST of Cucsat.G16623 vs. NCBI nr
Match: XP_008454170.1 (PREDICTED: deSI-like protein At4g17486 [Cucumis melo])

HSP 1 Score: 437 bits (1123), Expect = 6.22e-154
Identity = 225/235 (95.74%), Postives = 231/235 (98.30%), Query Frame = 0


Query: 1   MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST
Sbjct: 1   MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60

Query: 61  GIFEGEPKQCEGFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQCEGF+FRKSILIG+TDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH
Sbjct: 61  GIFEGEPKQCEGFRFRKSILIGKTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH 120

Query: 121 VCIKLTGNPIPSWVNRLARIGWICNCVLPATLNSTKFGQNRVQKKTNEEKQEKGVEEEEE 180
           VCIKLTGNPIPSWVNRLARIGWICNCVLPATL+ST+FGQNRVQKKTNEEKQEKG EEEEE
Sbjct: 121 VCIKLTGNPIPSWVNRLARIGWICNCVLPATLSSTRFGQNRVQKKTNEEKQEKGGEEEEE 180

Query: 181 KKKKELMPKVQTVEISGSNSNSSSSSSSSPITLRRGRSRTRRPRLPTSPLIPTSN 235
           KKK E MPK+QTVEISGS+SNSSSSSSS PITLRRGRSRTRRPRLPTSPLIPTSN
Sbjct: 181 KKK-ESMPKIQTVEISGSHSNSSSSSSS-PITLRRGRSRTRRPRLPTSPLIPTSN 233

[Close]

BLAST of Cucsat.G16623 vs. NCBI nr
Match: XP_038881748.1 (deSI-like protein At4g17486 [Benincasa hispida] >XP_038881756.1 deSI-like protein At4g17486 [Benincasa hispida])

HSP 1 Score: 416 bits (1069), Expect = 8.84e-146
Identity = 213/232 (91.81%), Postives = 221/232 (95.26%), Query Frame = 0


Query: 1   MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           MLCRRISSN DSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST
Sbjct: 1   MLCRRISSNGDSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60

Query: 61  GIFEGEPKQCEGFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQC+GFKFRKSILIG+TDLSEAEV+SLMEELGKDYRGNAYNLITKNCNHFCNH
Sbjct: 61  GIFEGEPKQCDGFKFRKSILIGKTDLSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNH 120

Query: 121 VCIKLTGNPIPSWVNRLARIGWICNCVLPATLNSTKFGQNRVQKKTNEEKQEKGVEEEEE 180
           VCIKLTGNPIPSWVNRLARIGWICNCVLPATLNSTKFGQNRVQKKT+EEKQEK     EE
Sbjct: 121 VCIKLTGNPIPSWVNRLARIGWICNCVLPATLNSTKFGQNRVQKKTSEEKQEK-----EE 180

Query: 181 KKKKELMPKVQTVEISGSNSNSSSSSSSSPITLRRGRSRTRRPRLPTSPLIP 232
           +KK E+MP++QT EIS SNS  SSSSSSSPITLRRGRSRTRRPRLPTSPLIP
Sbjct: 181 EKKNEVMPRIQTPEISASNS--SSSSSSSPITLRRGRSRTRRPRLPTSPLIP 225

[Close]

BLAST of Cucsat.G16623 vs. NCBI nr
Match: KAG6581964.1 (DeSI-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 400 bits (1027), Expect = 2.47e-139
Identity = 204/235 (86.81%), Postives = 215/235 (91.49%), Query Frame = 0


Query: 1   MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           M CRRIS N DSGS PVYLNVYDLT INGYAYW GLGVYHSG+QVHGIEFAFGAHEYPST
Sbjct: 1   MWCRRISCNGDSGSVPVYLNVYDLTHINGYAYWLGLGVYHSGVQVHGIEFAFGAHEYPST 60

Query: 61  GIFEGEPKQCEGFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQC+GFKFR+SILIG+TD+SEAEV+SLMEELGKDYRGNAYNLITKNCNHFCNH
Sbjct: 61  GIFEGEPKQCDGFKFRESILIGKTDMSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNH 120

Query: 121 VCIKLTGNPIPSWVNRLARIGWICNCVLPATLNSTKFGQNRVQKKTNEEKQEKGVEEEEE 180
           VCIKLTGNPIP+WVNRLARIGWICNCVLPATLNSTKFGQNR QKK  EEKQE    EEEE
Sbjct: 121 VCIKLTGNPIPNWVNRLARIGWICNCVLPATLNSTKFGQNRAQKKRGEEKQE----EEEE 180

Query: 181 KKKKELMPKVQTVEISGSNSNSSSSSSSSPITLRRGRSRTRRPRLPTSPLIPTSN 235
           KKKKEL  ++QT EIS SNS+SSSSSSSS  TLRRGRSRTRRPRLP SPLIPTS+
Sbjct: 181 KKKKELARRIQTAEISASNSSSSSSSSSSTTTLRRGRSRTRRPRLPASPLIPTSS 231

[Close]

BLAST of Cucsat.G16623 vs. NCBI nr
Match: XP_023528854.1 (deSI-like protein At4g17486 [Cucurbita pepo subsp. pepo] >XP_023528855.1 deSI-like protein At4g17486 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 395 bits (1014), Expect = 2.20e-137
Identity = 202/233 (86.70%), Postives = 213/233 (91.42%), Query Frame = 0


Query: 1   MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           M CRRIS N DSGS PVYLNVYDLT INGYAYW GLGVYHSG+QVHGIEFAFGAHEYPST
Sbjct: 1   MWCRRISCNGDSGSVPVYLNVYDLTHINGYAYWLGLGVYHSGVQVHGIEFAFGAHEYPST 60

Query: 61  GIFEGEPKQCEGFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQC+GFKFR+SILIG+TD+SEAEV+SLMEELGKDYRGNAYNLITKNCNHFCN 
Sbjct: 61  GIFEGEPKQCDGFKFRESILIGKTDMSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNR 120

Query: 121 VCIKLTGNPIPSWVNRLARIGWICNCVLPATLNSTKFGQNRVQKKTNEEKQEKGVEEEEE 180
           VCIKLTGNPIP+WVNRLARIGWICNCVLPATLNSTKFGQNR QKK  EEKQE   EEEEE
Sbjct: 121 VCIKLTGNPIPNWVNRLARIGWICNCVLPATLNSTKFGQNRAQKKRGEEKQE---EEEEE 180

Query: 181 KKKKELMPKVQTVEISGSNSNSSSSSSSSPITLRRGRSRTRRPRLPTSPLIPT 233
           +KKKEL  ++QT EIS SNS+SSSSSSSS  TLRRGRSRTRRPRLP SPLIPT
Sbjct: 181 EKKKELARRIQTAEISASNSSSSSSSSSSTTTLRRGRSRTRRPRLPASPLIPT 230

[Close]

BLAST of Cucsat.G16623 vs. ExPASy TrEMBL
Match: A0A0A0KX01 (PPPDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006490 PE=3 SV=1)

HSP 1 Score: 465 bits (1196), Expect = 2.41e-165
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST
Sbjct: 1   MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60

Query: 61  GIFEGEPKQCEGFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQCEGFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH
Sbjct: 61  GIFEGEPKQCEGFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH 120

Query: 121 VCIKLTGNPIPSWVNRLARIGWICNCVLPATLNSTKFGQNRVQKKTNEEKQEKGVEEEEE 180
           VCIKLTGNPIPSWVNRLARIGWICNCVLPATLNSTKFGQNRVQKKTNEEKQEKGVEEEEE
Sbjct: 121 VCIKLTGNPIPSWVNRLARIGWICNCVLPATLNSTKFGQNRVQKKTNEEKQEKGVEEEEE 180

Query: 181 KKKKELMPKVQTVEISGSNSNSSSSSSSSPITLRRGRSRTRRPRLPTSPLIPTSNC 236
           KKKKELMPKVQTVEISGSNSNSSSSSSSSPITLRRGRSRTRRPRLPTSPLIPTSNC
Sbjct: 181 KKKKELMPKVQTVEISGSNSNSSSSSSSSPITLRRGRSRTRRPRLPTSPLIPTSNC 236

[Close]

BLAST of Cucsat.G16623 vs. ExPASy TrEMBL
Match: A0A1S3BXH1 (deSI-like protein At4g17486 OS=Cucumis melo OX=3656 GN=LOC103494655 PE=3 SV=1)

HSP 1 Score: 437 bits (1123), Expect = 3.01e-154
Identity = 225/235 (95.74%), Postives = 231/235 (98.30%), Query Frame = 0


Query: 1   MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST
Sbjct: 1   MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60

Query: 61  GIFEGEPKQCEGFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQCEGF+FRKSILIG+TDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH
Sbjct: 61  GIFEGEPKQCEGFRFRKSILIGKTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH 120

Query: 121 VCIKLTGNPIPSWVNRLARIGWICNCVLPATLNSTKFGQNRVQKKTNEEKQEKGVEEEEE 180
           VCIKLTGNPIPSWVNRLARIGWICNCVLPATL+ST+FGQNRVQKKTNEEKQEKG EEEEE
Sbjct: 121 VCIKLTGNPIPSWVNRLARIGWICNCVLPATLSSTRFGQNRVQKKTNEEKQEKGGEEEEE 180

Query: 181 KKKKELMPKVQTVEISGSNSNSSSSSSSSPITLRRGRSRTRRPRLPTSPLIPTSN 235
           KKK E MPK+QTVEISGS+SNSSSSSSS PITLRRGRSRTRRPRLPTSPLIPTSN
Sbjct: 181 KKK-ESMPKIQTVEISGSHSNSSSSSSS-PITLRRGRSRTRRPRLPTSPLIPTSN 233

[Close]

BLAST of Cucsat.G16623 vs. ExPASy TrEMBL
Match: A0A6J1DIV3 (deSI-like protein At4g17486 OS=Momordica charantia OX=3673 GN=LOC111020936 PE=3 SV=1)

HSP 1 Score: 392 bits (1008), Expect = 8.15e-137
Identity = 203/235 (86.38%), Postives = 215/235 (91.49%), Query Frame = 0


Query: 1   MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           MLCRRISSN DSGSAPVYLNVYDLTPINGYAYWFGLGVYHSG+QVHGIEFAFGAHEYPST
Sbjct: 1   MLCRRISSNGDSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGVQVHGIEFAFGAHEYPST 60

Query: 61  GIFEGEPKQCEGFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQC+GFKFR+SILIG+TDLS+AEV+SLMEELGKDYRGNAYNLITKNCNHFCN 
Sbjct: 61  GIFEGEPKQCDGFKFRRSILIGKTDLSQAEVRSLMEELGKDYRGNAYNLITKNCNHFCNQ 120

Query: 121 VCIKLTGNPIPSWVNRLARIGWICNCVLPATLNSTKFGQNRVQKKTNEEKQEKGVEEEEE 180
           VC+KLTGN IPSWVNRLARIGWICNCVLPATLNSTKFGQNRV+KKT+EE      EEEEE
Sbjct: 121 VCMKLTGNSIPSWVNRLARIGWICNCVLPATLNSTKFGQNRVKKKTSEE------EEEEE 180

Query: 181 KKKKELMPKVQTVEISGSNSNSSSSSSSSPITLRRGRSRTRRPRLPTSPLIPTSN 235
           +KKK+  P VQT EI+ SNS  SSSSSSSP  LRRGRSRTRRPR P SPLIPTSN
Sbjct: 181 EKKKKESPIVQTAEIAASNS--SSSSSSSPTILRRGRSRTRRPRPPPSPLIPTSN 227

[Close]

BLAST of Cucsat.G16623 vs. ExPASy TrEMBL
Match: A0A6J1GTY9 (deSI-like protein At4g17486 OS=Cucurbita moschata OX=3662 GN=LOC111457516 PE=3 SV=1)

HSP 1 Score: 390 bits (1003), Expect = 4.71e-136
Identity = 201/235 (85.53%), Postives = 211/235 (89.79%), Query Frame = 0


Query: 1   MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           M CRRIS N DSGS PVYLNVYDLT INGYAYW GLGVYHSG+QVHGIEFAFGAHEYPST
Sbjct: 1   MWCRRISCNGDSGSVPVYLNVYDLTHINGYAYWLGLGVYHSGVQVHGIEFAFGAHEYPST 60

Query: 61  GIFEGEPKQCEGFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQC+GFKFR+SILIG+TD+SEAEV+SLMEELGKDYRGNAYNLITKNCNHFCNH
Sbjct: 61  GIFEGEPKQCDGFKFRESILIGKTDMSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNH 120

Query: 121 VCIKLTGNPIPSWVNRLARIGWICNCVLPATLNSTKFGQNRVQKKTNEEKQEKGVEEEEE 180
           VCIKLTGNPIP+WVNRLARIGWICNCVLPATLNSTKFGQNR QKK  EEKQE   EEEEE
Sbjct: 121 VCIKLTGNPIPNWVNRLARIGWICNCVLPATLNSTKFGQNRAQKKRGEEKQE---EEEEE 180

Query: 181 KKKKELMPKVQTVEISGSNSNSSSSSSSSPITLRRGRSRTRRPRLPTSPLIPTSN 235
           KKKKEL  ++QT EIS SNS     SSSS  TLRRGRSRTRRPRLP SPLIPTS+
Sbjct: 181 KKKKELARRIQTAEISASNS-----SSSSTTTLRRGRSRTRRPRLPASPLIPTSS 227

[Close]

BLAST of Cucsat.G16623 vs. ExPASy TrEMBL
Match: A0A6J1J0C0 (deSI-like protein At4g17486 OS=Cucurbita maxima OX=3661 GN=LOC111480086 PE=3 SV=1)

HSP 1 Score: 389 bits (1000), Expect = 1.50e-135
Identity = 202/235 (85.96%), Postives = 212/235 (90.21%), Query Frame = 0


Query: 1   MLCRRISSNADSGSAPVYLNVYDLTPINGYAYWFGLGVYHSGLQVHGIEFAFGAHEYPST 60
           M CRRIS N DSGS PVYLNVYDLT INGYAYW GLGVYHSG+QVHGIEFAFGAHE PST
Sbjct: 1   MWCRRISCNGDSGSVPVYLNVYDLTHINGYAYWLGLGVYHSGVQVHGIEFAFGAHECPST 60

Query: 61  GIFEGEPKQCEGFKFRKSILIGQTDLSEAEVKSLMEELGKDYRGNAYNLITKNCNHFCNH 120
           GIFEGEPKQC+GFKFR+SILIG+TD+SEAEV+SLMEELGKDYRGNAYNLITKNCNHFCNH
Sbjct: 61  GIFEGEPKQCDGFKFRESILIGKTDMSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNH 120

Query: 121 VCIKLTGNPIPSWVNRLARIGWICNCVLPATLNSTKFGQNRVQKKTNEEKQEKGVEEEEE 180
            CIKLTGNPIPSWVNRLARIGWICNCVLPATLNSTKFGQNR QKK  EEKQE    EEEE
Sbjct: 121 FCIKLTGNPIPSWVNRLARIGWICNCVLPATLNSTKFGQNRAQKKRGEEKQE----EEEE 180

Query: 181 KKKKELMPKVQTVEISGSNSNSSSSSSSSPITLRRGRSRTRRPRLPTSPLIPTSN 235
           +KKKEL  ++QT EIS SNS SSSSSSSS  TLRRGRSRTRRPRLP SPLIPTS+
Sbjct: 181 EKKKELARRIQTAEISASNS-SSSSSSSSTTTLRRGRSRTRRPRLPASPLIPTSS 230

The following BLAST results are available for this feature:

BLAST of Cucsat.G16623 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93VG8	4.2e-50	45.08	DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV...	[more]
Q5PQ09	5.7e-31	42.86	Deubiquitinase DESI2 OS=Xenopus laevis OX=8355 GN=desi2 PE=2 SV=1	[more]
Q6DC39	1.7e-30	42.94	Deubiquitinase DESI2 OS=Danio rerio OX=7955 GN=desi2 PE=2 SV=1	[more]
Q9BSY9	8.2e-30	41.42	Deubiquitinase DESI2 OS=Homo sapiens OX=9606 GN=DESI2 PE=1 SV=1	[more]
A3QRX8	8.2e-30	41.42	Deubiquitinase DESI2 OS=Sus scrofa OX=9823 GN=DESI2 PE=2 SV=1	[more]

BLAST of Cucsat.G16623 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152173.1	4.97e-165	100.00	deSI-like protein At4g17486 [Cucumis sativus] >KGN52942.1 hypothetical protein C...	[more]
XP_008454170.1	6.22e-154	95.74	PREDICTED: deSI-like protein At4g17486 [Cucumis melo]	[more]
XP_038881748.1	8.84e-146	91.81	deSI-like protein At4g17486 [Benincasa hispida] >XP_038881756.1 deSI-like protei...	[more]
KAG6581964.1	2.47e-139	86.81	DeSI-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023528854.1	2.20e-137	86.70	deSI-like protein At4g17486 [Cucurbita pepo subsp. pepo] >XP_023528855.1 deSI-li...	[more]

BLAST of Cucsat.G16623 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KX01	2.41e-165	100.00	PPPDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006490 PE=3 ...	[more]
A0A1S3BXH1	3.01e-154	95.74	deSI-like protein At4g17486 OS=Cucumis melo OX=3656 GN=LOC103494655 PE=3 SV=1	[more]
A0A6J1DIV3	8.15e-137	86.38	deSI-like protein At4g17486 OS=Momordica charantia OX=3673 GN=LOC111020936 PE=3 ...	[more]
A0A6J1GTY9	4.71e-136	85.53	deSI-like protein At4g17486 OS=Cucurbita moschata OX=3662 GN=LOC111457516 PE=3 S...	[more]
A0A6J1J0C0	1.50e-135	85.96	deSI-like protein At4g17486 OS=Cucurbita maxima OX=3661 GN=LOC111480086 PE=3 SV=...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 149..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..173
None	No IPR available	PANTHER	PTHR12378:SF52	F23A5.4 PROTEIN	coord: 3..218
IPR008580	PPPDE peptidase domain	SMART	SM01179	DUF862_2a	coord: 15..137 e-value: 8.5E-41 score: 151.5
IPR008580	PPPDE peptidase domain	PFAM	PF05903	Peptidase_C97	coord: 16..133 e-value: 2.1E-33 score: 115.3
IPR008580	PPPDE peptidase domain	PANTHER	PTHR12378	DESUMOYLATING ISOPEPTIDASE	coord: 3..218
IPR008580	PPPDE peptidase domain	PROSITE	PS51858	PPPDE	coord: 15..136 score: 41.298409
IPR042266	PPPDE peptidase domain superfamily	GENE3D	3.90.1720.30	PPPDE domains	coord: 11..157 e-value: 1.3E-33 score: 117.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G16623.T2	Cucsat.G16623.T2	mRNA
Cucsat.G16623.T1	Cucsat.G16623.T1	mRNA
Cucsat.G16623.T5	Cucsat.G16623.T5	mRNA
Cucsat.G16623.T3	Cucsat.G16623.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016579	protein deubiquitination
molecular_function	GO:0101005	deubiquitinase activity
molecular_function	GO:0008233	peptidase activity