Cucsat.G16296 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G16296
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Phytoene synthase
Location	ctg2246: 692660 .. 696516 (+)
RNA-Seq Expression	Cucsat.G16296
Synteny	Cucsat.G16296

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTAAAACAAAGAATGTAATTTGTGGATGAAAACGAAAAGAAGTGAAACGAAAAAAGAAGTAATATTTAATTGGGCAACAAACAACTCTGACACTCTTTTTGTCACACTGCTCCCATTCAAAAACTGAGCCGCAACTTGCACAAACTAGCCGTCGAGATCAGTCAACCACACAGTTTGCGGACCAAATTCTTCCAGCAACTACCAACCTTCCCCCAAAAAGCCCACACCACCCTCAAACTCAACCCAATCAACCCCTCTTTTATACAATTCAAACACAAACACAGACCCCCATCTTCTCTCTGCTTCATTGCGGTTCTTCTGTCGTAAGTGACTCTCTTCTATGGCTTCCTCTTTTTGCTTTACATTCTACTATGTTTAGTCACCGTTCTGGGGGGATTCGTTTCCTCCTCCTTTTTTTTTCTTTTTCTTTTTTTAAATTTTCAGTCAAAATTTCATGACGAAAGAAACCGACCCTTTTCCACTTACCCTCCAAAAAGAGAAACAGTGAACTGAGCTTTCACATTCTCTGCCCTTTCTTGAGGATTATGATCATGTGGGTGTTTGGTATTTTTTGGTTATGGTGTTTATTTTATACCCACACAATCGGGTTCTTATATTTATTTATTCTTACTTCATTTTGGTTTTTTTTTTTTTATCTATTTATTTATTTTTGGACGAATTACAGGTGCGATACAAAAGAGAAGCTAAGTGGGAGTTTCTTCCGTGTCGAAGCATTGCTTAGAATTTCTTGGGCGGTTTAGTTGGATTTAAGTTATCTTTGCTTTTCCATTTCATTTTGCTACTGGGTTTCTCGATTCCTCTGCGATTCGTTCATTAAAAGCCTTGGAATTCTTCTAGTGGGATTAAAATCGATTGATATGTCTTTTACTTCATCGTTAGTTGTTTCTCCCAACGTTGAACTTTCCCCATCCAACTTTGGGTTTCTTGATTCTCTTCGAGATGGACCCCAAATTCCCGATTCTTTTAGATTCTTTTCGCGAAATCGAGTGCCAAATCTGATTAACAAGAGACAGAAGTGGGGGAATCCCTCTCATTCTACAGAACTGAAATACCCAATTCTCTGTGAAAGTGGATATGGGTCTGTTATTGCAGCAAGTATGGTGGCGAATCCCGCCGGAGAAATGGCCGTCTCAGCTGAGCAGAAGGTGTATAACGTAGTTATGAAACAGGCGGCTCTGGTGAAACGACAACTTAGAACCGCCGGAGAATTGGATGTGAAGCCGGATATTGTTCTTCCGGGGACTTTGAGCTTGTTGAATGAGGCTTATGATCGTTGTGGTGAAGTTTGTGCAGAGTATGCCAAGACATTTTATCTGGGTTAGCTTTTCTGTTTATATTTTTTTAGCCAAAAGTTTAGAGATGGAAAATTTGAGAAGTATCTCTGGTTCTTTGATTCTTATCTGATTCTGATTCTGATTCTTTTATCTTTTTAGGAACTATGTTGATGACACCGGAGAGGCAAAAGGCTATTTGGGCAATTTATGGTAAGCGTTACGAACTTTTTGTTTGGATAACCTTTATTTCATCTTCTTTGTTTTGATCATTGGCCATTGCTGCAAAGAAAGTTAGTCTAGGTGATTTTGGATATATGTTTAATGAAAGTTTTAGTTTTCTTTTTATTGCTCATGATACCCTTTGCCTGTGAAATCAACCACCATAGATCAGTCTAATGAACTGATCAATAGATTAAACTAAAAAGTAAAAAAATTGTGGCATATGACGGACGTTTGTAGATGAGAGAAATGTGGACTTAATTTCTCCTTCTTGTCTTTGTTCTTGGCATGAAGTATGGTGTAGGCGGACAGATGAACTTGTTGATGGGCCAAATGCTTCACACATAACACCTACTGCATTGGACAGATGGGAGGCAAGGTTGGAAGAGCTTTTCCAAGGGAGGCCATTCGATATGCTCGATGCAGCTTTGGCGGATACCGTTACTAAGTTCCCTGTCGATATTCAGGTTGGATATGGTTCGATCAACTTGATGCCTTCTGATATGTGCTTACTTGACTACTTCTTAACCCTAAAACTTGTTTTGTTTTCTTACAAACTTGATATCTCTCTTGTAGAGATTCTGTTTTGGCTAATAAGATGATTGAAGTTTAATATGCTTTGATATCCGCAGCCATTCAAAGATATGATCGAAGGGATGCGGATGGATCTAAGGAAGTCGAGATACAAGAATTTCGACGAACTTTATCTCTACTGTTATTATGTTGCTGGTACAGTTGGGTTGATGAGTGTTCCTGTCATGGGCATTGCACCTGAGTCCGAAGCAAGCACAGAGAGTGTGTACAATGCTGCCTTAGCATTAGGCATTGCTAATCAGCTCACAAACATTCTCAGAGATGTTGGAGAAGAGTAAGTTCCTGCCCTTTACTAATGTTTTGCTAAGCTCAAAACCACAATGAAATAATGGGTTCATGTCTCAATTGTTGTCTTTCTACTTTGTCTGGTGATGAAGATGGTAGTATAAAGAGAACATCTCCCAAATCTAAGTTTAACTTAAAAACTTTGATTCCATCACTTAAAACCTCAACAAATTGACAAGGCGTGAATTTAAGCAGATGGGTCAACTTGGTAGTGATCAAGGATTAATGAAAATGTAAAAGCCTAGTAGAGAATTCTTTCAAACGTATTTTGTTAGATTAGTTGAGGTGCACGTTAATTACAGGTCGAAAGAAAAAGGTTGGATTACAACCTTTTGTTGTCTTATAATGGGATTTATCTATTATTAGTTAGGTGACAAATGTTGTCGTTTTTGTTTTTGTTTTTGTTTTGTTAATCATGAATGGAAAGATGTAATATGATTAAAGAAATGTTTGGTGGGTGTGTAAAGTGCTAGAAGAGGAAGAATATATCTACCACAAGATGAGCTAGCACAGGCAGGACTTTCAGATGAGGACATATTTGCTGGAAGAGTAACTGATAAATGGAGAAACTTCATGAAGAGTCAGATTAAGAGAGCTAGAATGTTCTTCGATGAGGCCGAGAAAGGAGTTTTGGAGCTTAATAAAGCTAGCAGATGGCCGGTAAAGTTTCCTTTTCCTTCTCTCTCTATACTTTTTGTTTTTTCTTCCACACTTGGAAAAGTGAAGTGAATATTAAAGTGTATATTTTTTTCAATAAATTAACACATTAACTAATAAATCGTTTTACAAACCCATCTCTAAAACTTTGCTATATGATTTGGAAAATACAATTTCTATATTAAATAAGTAGTGTAAGTAATCTATATAGTTTTTGTTGTTCCAAACCTATTTGCAGGATGACGAAGAATACATCATAAATTTAGCTATCTATTTTTATCGAAACTCCCACTAATTCAAAAGGAATATGTTTTCGCTATTATATGTAATTTGAATATTGGTTTGTTGTGTAGGTGTGGGCTTCTTTGCTATTATATAGGCAAATATTGGATGAGATTGAAGCAAATGACTACAACAACTTCACAAAGAGGGCTTATGTGAGGAAAGGCAAGAAAATATTGGCTTTGCCAATGGCTTATGCAAGGGCCCTCCTTGGCCCTTCATGAATTTACACCTCTATACACTCAACGAACACAATCAAAATTCAACCAAAAAAAAAAAAAAGAGAGAAAAAAAAAATGTATATTAGCATATTCTTATCGATACAATGTGTCCACAATCAGTTATAGTCAAATTCCAATTTTTGTTCTCAAGGTGCTTCACTTCACTTGGGGCTTTGTTCCTAATTAGTTTGTATATTTCTTGTTTAGTGTAAAACAGGGTGTTGAAATTATGGGATGGAAGACATGTAAAATAAAACACATAACTTTGCCTACTGGAACTTTTCCACAAAGTAAAAAGAGAGA

Coding sequence (CDS)

ATGTCTTTTACTTCATCGTTAGTTGTTTCTCCCAACGTTGAACTTTCCCCATCCAACTTTGGGTTTCTTGATTCTCTTCGAGATGGACCCCAAATTCCCGATTCTTTTAGATTCTTTTCGCGAAATCGAGTGCCAAATCTGATTAACAAGAGACAGAAGTGGGGGAATCCCTCTCATTCTACAGAACTGAAATACCCAATTCTCTGTGAAAGTGGATATGGGTCTGTTATTGCAGCAAGTATGGTGGCGAATCCCGCCGGAGAAATGGCCGTCTCAGCTGAGCAGAAGGTGTATAACGTAGTTATGAAACAGGCGGCTCTGGTGAAACGACAACTTAGAACCGCCGGAGAATTGGATGTGAAGCCGGATATTGTTCTTCCGGGGACTTTGAGCTTGTTGAATGAGGCTTATGATCGTTGTGGTGAAGTTTGTGCAGAGTATGCCAAGACATTTTATCTGGGAACTATGTTGATGACACCGGAGAGGCAAAAGGCTATTTGGGCAATTTATGTATGGTGTAGGCGGACAGATGAACTTGTTGATGGGCCAAATGCTTCACACATAACACCTACTGCATTGGACAGATGGGAGGCAAGGTTGGAAGAGCTTTTCCAAGGGAGGCCATTCGATATGCTCGATGCAGCTTTGGCGGATACCGTTACTAAGTTCCCTGTCGATATTCAGCCATTCAAAGATATGATCGAAGGGATGCGGATGGATCTAAGGAAGTCGAGATACAAGAATTTCGACGAACTTTATCTCTACTGTTATTATGTTGCTGGTACAGTTGGGTTGATGAGTGTTCCTGTCATGGGCATTGCACCTGAGTCCGAAGCAAGCACAGAGAGTGTGTACAATGCTGCCTTAGCATTAGGCATTGCTAATCAGCTCACAAACATTCTCAGAGATGTTGGAGAAGAAAATGTTTGGTGGGTGTGTAAAGTGCTAGAAGAGGAAGAATATATCTACCACAAGATGAGCTAG

Protein sequence

MSFTSSLVVSPNVELSPSNFGFLDSLRDGPQIPDSFRFFSRNRVPNLINKRQKWGNPSHSTELKYPILCESGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDVKPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELVDGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQLTNILRDVGEENVWWVCKVLEEEEYIYHKMS

Homology

[Close]

BLAST of Cucsat.G16296 vs. ExPASy Swiss-Prot
Match: P49293 (Phytoene synthase, chloroplastic OS=Cucumis melo OX=3656 GN=PSY PE=2 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 1.4e-165
Identity = 292/308 (94.81%), Postives = 298/308 (96.75%), Query Frame = 0


Query: 1   MSFTSSLVVSPNVELSPSNFGFLDSLRDGPQIPDSFRFFSRNRVPNLINKRQKWGNPSHS 60
           MS  SSLVVS NVELSPS+FGFLDS+RDGPQIPDSFRF SRNRVPNLINK+QKWGN SHS
Sbjct: 1   MSLASSLVVSSNVELSPSSFGFLDSVRDGPQIPDSFRFSSRNRVPNLINKKQKWGNHSHS 60

Query: 61  TELKYPILCESGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120
           TELKYPIL ESGYGSVI ASMVANPAGE+AVSAEQKVYNVVMKQAALVKRQLRTAGELDV
Sbjct: 61  TELKYPILHESGYGSVIVASMVANPAGEIAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD
Sbjct: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQL-TN 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPES+ASTESVYNAALALGIANQ   N
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQAPPN 300

Query: 301 ILRDVGEE 308
           ILRDVGE+
Sbjct: 301 ILRDVGED 308

[Close]

BLAST of Cucsat.G16296 vs. ExPASy Swiss-Prot
Match: P37272 (Bifunctional 15-cis-phytoene synthase, chromoplastic OS=Capsicum annuum OX=4072 GN=PSY1 PE=1 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 6.7e-115
Identity = 220/311 (70.74%), Postives = 253/311 (81.35%), Query Frame = 0


Query: 1   MSFTSSLVVSPNVELSPSNFGFLDSLRDGPQIPDSFRFFSRNRVPNLINKR----QKWGN 60
           MS     VVSP  ++S +  GFL S+R+G +I DS     RN   N   KR    Q+W  
Sbjct: 1   MSVALLWVVSP-CDVS-NGTGFLVSVREGNRIFDSSG--RRNLACNERIKRGGGKQRWSF 60

Query: 61  PSHSTELKYPILCESGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAG 120
            S+    +      SG    + +++VA PAGEM +S+E+ VY+VV++QAALVKRQLR+  
Sbjct: 61  GSYLGGAQ----TGSGRKFSVRSAIVATPAGEMTMSSERMVYDVVLRQAALVKRQLRSTD 120

Query: 121 ELDVKPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRT 180
           ELDVK DI +PGTL LL+EAYDRC EVCAEYAKTFYLGTMLMTPER+KAIWAIYVWCRRT
Sbjct: 121 ELDVKKDIPIPGTLGLLSEAYDRCSEVCAEYAKTFYLGTMLMTPERRKAIWAIYVWCRRT 180

Query: 181 DELVDGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEG 240
           DELVDGPNASHITP ALDRWE RLE++F GRPFDMLDAAL+DTV+KFPVDIQPF+DMIEG
Sbjct: 181 DELVDGPNASHITPAALDRWEDRLEDVFSGRPFDMLDAALSDTVSKFPVDIQPFRDMIEG 240

Query: 241 MRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQ 300
           MRMDLRKSRY+NFDELYLYCYYVAGTVGLMSVP+MGIAPES+A+TESVYNAALALGIANQ
Sbjct: 241 MRMDLRKSRYRNFDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQ 300

Query: 301 LTNILRDVGEE 308
           LTNILRDVGE+
Sbjct: 301 LTNILRDVGED 303

[Close]

BLAST of Cucsat.G16296 vs. ExPASy Swiss-Prot
Match: P37271 (Phytoene synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSY1 PE=1 SV=2)

HSP 1 Score: 404.4 bits (1038), Expect = 1.2e-111
Identity = 205/280 (73.21%), Postives = 244/280 (87.14%), Query Frame = 0


Query: 31  QIPDSFRFFSRNRVPNLINKRQKWGNPSHSTELKYPILCESGYGSVIAASMVANPAGEMA 90
           ++ +S R FS  +   L NK +K   P+ S+     +   S    V+++S+VA+P+GE+A
Sbjct: 27  RVLESSRLFSPCQNQRL-NKGKKKQIPTWSSSF---VRNRSRRIGVVSSSLVASPSGEIA 86

Query: 91  VSAEQKVYNVVMKQAALVKRQLRTAG-ELDVK--PDIVLPGTLSLLNEAYDRCGEVCAEY 150
           +S+E+KVYNVV+KQAALV +QLR++  +LDVK   D+VLPG+LSLL EAYDRCGEVCAEY
Sbjct: 87  LSSEEKVYNVVLKQAALVNKQLRSSSYDLDVKKPQDVVLPGSLSLLGEAYDRCGEVCAEY 146

Query: 151 AKTFYLGTMLMTPERQKAIWAIYVWCRRTDELVDGPNASHITPTALDRWEARLEELFQGR 210
           AKTFYLGT+LMTPER+KAIWAIYVWCRRTDELVDGPNASHITP ALDRWEARLE+LF+GR
Sbjct: 147 AKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPMALDRWEARLEDLFRGR 206

Query: 211 PFDMLDAALADTVTKFPVDIQPFKDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMS 270
           PFDMLDAALADTV ++PVDIQPF+DMIEGMRMDL+KSRY+NFD+LYLYCYYVAGTVGLMS
Sbjct: 207 PFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMS 266

Query: 271 VPVMGIAPESEASTESVYNAALALGIANQLTNILRDVGEE 308
           VPVMGI P+S+A+TESVYNAALALGIANQLTNILRDVGE+
Sbjct: 267 VPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGED 302

[Close]

BLAST of Cucsat.G16296 vs. ExPASy Swiss-Prot
Match: P08196 (Phytoene synthase 1, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PSY1 PE=1 SV=2)

HSP 1 Score: 403.3 bits (1035), Expect = 2.6e-111
Identity = 208/308 (67.53%), Postives = 248/308 (80.52%), Query Frame = 0


Query: 1   MSFTSSLVVSPNVELSPSNFGFLDSLRDGPQIPDSFRFFSRNRVPNLI-NKRQKWGNPSH 60
           MS     VVSP  ++S +   F++S+R+G       RFF  +R  NL+ N+R   G    
Sbjct: 1   MSVALLWVVSP-CDVS-NGTSFMESVREGN------RFFDSSRHRNLVSNERINRGGGKQ 60

Query: 61  STELKYPILCESGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELD 120
           +          +G    + ++++A P+GE  +++EQ VY+VV++QAALVKRQLR+  EL+
Sbjct: 61  T---------NNGRKFSVRSAILATPSGERTMTSEQMVYDVVLRQAALVKRQLRSTNELE 120

Query: 121 VKPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDEL 180
           VKPDI +PG L LL+EAYDRCGEVCAEYAKTF LGTMLMTPER++AIWAIYVWCRRTDEL
Sbjct: 121 VKPDIPIPGNLGLLSEAYDRCGEVCAEYAKTFNLGTMLMTPERRRAIWAIYVWCRRTDEL 180

Query: 181 VDGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRM 240
           VDGPNAS+ITP ALDRWE RLE++F GRPFDMLD AL+DTV+ FPVDIQPF+DMIEGMRM
Sbjct: 181 VDGPNASYITPAALDRWENRLEDVFNGRPFDMLDGALSDTVSNFPVDIQPFRDMIEGMRM 240

Query: 241 DLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQLTN 300
           DLRKSRYKNFDELYLYCYYVAGTVGLMSVP+MGIAPES+A+TESVYNAALALGIANQLTN
Sbjct: 241 DLRKSRYKNFDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTN 291

Query: 301 ILRDVGEE 308
           ILRDVGE+
Sbjct: 301 ILRDVGED 291

[Close]

BLAST of Cucsat.G16296 vs. ExPASy Swiss-Prot
Match: P53797 (Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus OX=39639 GN=PSY PE=2 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.3e-110
Identity = 201/273 (73.63%), Postives = 231/273 (84.62%), Query Frame = 0


Query: 39  FSRNRVPNLINKRQKWGNPSHSTELKYPIL---CESGYGSVIAASMVANPAGEMAVSAEQ 98
           FS  +  NL  K+ +    S  T  KY  +    E+    +I +S+VANPAGE  +S+EQ
Sbjct: 27  FSSPKYDNLGRKKSRLSVYSLYTTSKYACVGFEAENNGKFLIRSSLVANPAGEATISSEQ 86

Query: 99  KVYNVVMKQAALVKRQLRTAGE-LDVKPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLG 158
           KVY+VV+KQAALVK Q +++ +  DVKPDIVLPGT+ LL +AYDRCGEVCAEYAKTFYLG
Sbjct: 87  KVYDVVLKQAALVKDQTKSSRKSTDVKPDIVLPGTVYLLKDAYDRCGEVCAEYAKTFYLG 146

Query: 159 TMLMTPERQKAIWAIYVWCRRTDELVDGPNASHITPTALDRWEARLEELFQGRPFDMLDA 218
           T+LMTPER++AIWAIYVWCRRTDELVDG NASHITP+ALDRWEARLE+LF GRP+DM DA
Sbjct: 147 TLLMTPERRRAIWAIYVWCRRTDELVDGHNASHITPSALDRWEARLEDLFAGRPYDMFDA 206

Query: 219 ALADTVTKFPVDIQPFKDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIA 278
           AL+DTV++FPVDIQPF DM+EGMRMDL+KSRYKNFDELYLYCYYVAGTVGLMSVPVMGIA
Sbjct: 207 ALSDTVSRFPVDIQPFMDMVEGMRMDLKKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIA 266

Query: 279 PESEASTESVYNAALALGIANQLTNILRDVGEE 308
           PES A  ESVYNAALALGIANQLTNILRDVGE+
Sbjct: 267 PESLAEAESVYNAALALGIANQLTNILRDVGED 299

[Close]

BLAST of Cucsat.G16296 vs. NCBI nr
Match: XP_004148907.1 (phytoene synthase, chloroplastic [Cucumis sativus] >XP_031741913.1 phytoene synthase, chloroplastic [Cucumis sativus] >KGN50904.1 hypothetical protein Csa_023075 [Cucumis sativus])

HSP 1 Score: 617 bits (1592), Expect = 7.82e-221
Identity = 306/307 (99.67%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MSFTSSLVVSPNVELSPSNFGFLDSLRDGPQIPDSFRFFSRNRVPNLINKRQKWGNPSHS 60
           MSFTSSLVVSPNVELSPSNFGFLDSLRDGPQIPDSFRFFSRNRVPNLINKRQKWGNPSHS
Sbjct: 1   MSFTSSLVVSPNVELSPSNFGFLDSLRDGPQIPDSFRFFSRNRVPNLINKRQKWGNPSHS 60

Query: 61  TELKYPILCESGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120
           TELKYPILCESGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV
Sbjct: 61  TELKYPILCESGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD
Sbjct: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQLTNI 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQLTNI
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQLTNI 300

Query: 301 LRDVGEE 307
           LRDVGE+
Sbjct: 301 LRDVGED 307

[Close]

BLAST of Cucsat.G16296 vs. NCBI nr
Match: XP_008463168.1 (PREDICTED: phytoene synthase, chloroplastic isoform X1 [Cucumis melo] >AGN48017.1 phytoene synthase [Cucumis melo])

HSP 1 Score: 593 bits (1528), Expect = 4.35e-211
Identity = 295/307 (96.09%), Postives = 301/307 (98.05%), Query Frame = 0


Query: 1   MSFTSSLVVSPNVELSPSNFGFLDSLRDGPQIPDSFRFFSRNRVPNLINKRQKWGNPSHS 60
           MSF SSLVVS NVELSPS+FGFLDS+RDGPQIPDSFRF SRNRVPNLINK+QKWGN SHS
Sbjct: 1   MSFASSLVVSSNVELSPSSFGFLDSVRDGPQIPDSFRFSSRNRVPNLINKKQKWGNHSHS 60

Query: 61  TELKYPILCESGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120
           TELKYPIL ESGYGSVI ASMVANPAGE+AVSAEQKVYNVVMKQAALVKRQLRTAGELDV
Sbjct: 61  TELKYPILHESGYGSVIVASMVANPAGEIAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD
Sbjct: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQLTNI 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPES+ASTESVYNAALALGIANQLTNI
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQLTNI 300

Query: 301 LRDVGEE 307
           LRDVGE+
Sbjct: 301 LRDVGED 307

[Close]

BLAST of Cucsat.G16296 vs. NCBI nr
Match: NP_001284425.1 (phytoene synthase, chloroplastic [Cucumis melo] >ADC34069.1 phytoene synthase [Cucumis melo])

HSP 1 Score: 590 bits (1522), Expect = 3.56e-210
Identity = 294/307 (95.77%), Postives = 300/307 (97.72%), Query Frame = 0


Query: 1   MSFTSSLVVSPNVELSPSNFGFLDSLRDGPQIPDSFRFFSRNRVPNLINKRQKWGNPSHS 60
           MSF SSLVVS NVELSPS+FGFLDS+RDGPQIPDSFRF SRNRVPNLINK+QKWGN SH 
Sbjct: 1   MSFASSLVVSSNVELSPSSFGFLDSVRDGPQIPDSFRFSSRNRVPNLINKKQKWGNHSHY 60

Query: 61  TELKYPILCESGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120
           TELKYPIL ESGYGSVI ASMVANPAGE+AVSAEQKVYNVVMKQAALVKRQLRTAGELDV
Sbjct: 61  TELKYPILHESGYGSVIVASMVANPAGEIAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD
Sbjct: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQLTNI 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPES+ASTESVYNAALALGIANQLTNI
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQLTNI 300

Query: 301 LRDVGEE 307
           LRDVGE+
Sbjct: 301 LRDVGED 307

[Close]

BLAST of Cucsat.G16296 vs. NCBI nr
Match: AGT57744.1 (phytoene synthase [Citrullus lanatus])

HSP 1 Score: 587 bits (1512), Expect = 1.19e-208
Identity = 289/307 (94.14%), Postives = 299/307 (97.39%), Query Frame = 0


Query: 1   MSFTSSLVVSPNVELSPSNFGFLDSLRDGPQIPDSFRFFSRNRVPNLINKRQKWGNPSHS 60
           MSF  SLVVSPNVELSPS+FGFLDS+RDG QIPDS RFFSRNR  NL++K+QKWGN SHS
Sbjct: 1   MSFAPSLVVSPNVELSPSSFGFLDSVRDGSQIPDSSRFFSRNRAANLMSKKQKWGNHSHS 60

Query: 61  TELKYPILCESGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120
           TELKYPILCE GYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV
Sbjct: 61  TELKYPILCEGGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD
Sbjct: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQLTNI 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVP+MGIAP+S+ASTESVYN+ALALGIANQLTNI
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPIMGIAPDSQASTESVYNSALALGIANQLTNI 300

Query: 301 LRDVGEE 307
           LRDVGE+
Sbjct: 301 LRDVGED 307

[Close]

BLAST of Cucsat.G16296 vs. NCBI nr
Match: XP_038875566.1 (phytoene synthase, chloroplastic [Benincasa hispida] >XP_038875567.1 phytoene synthase, chloroplastic [Benincasa hispida])

HSP 1 Score: 582 bits (1501), Expect = 5.60e-207
Identity = 288/307 (93.81%), Postives = 297/307 (96.74%), Query Frame = 0


Query: 1   MSFTSSLVVSPNVELSPSNFGFLDSLRDGPQIPDSFRFFSRNRVPNLINKRQKWGNPSHS 60
           MSF SSLVVSPNVELSPS+FGFLDS+RDGPQIPDS RFF R R  NL+NK+QKWGN SHS
Sbjct: 1   MSFASSLVVSPNVELSPSSFGFLDSVRDGPQIPDSSRFFLRTRAANLMNKKQKWGNHSHS 60

Query: 61  TELKYPILCESGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120
           TELKYPIL E GYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRT GELDV
Sbjct: 61  TELKYPILYEDGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTGGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180
           KPDIV+PGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV
Sbjct: 121 KPDIVVPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD
Sbjct: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQLTNI 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAP+S+ASTESVYN+ALALGIANQLTNI
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPDSQASTESVYNSALALGIANQLTNI 300

Query: 301 LRDVGEE 307
           LRDVGE+
Sbjct: 301 LRDVGED 307

[Close]

BLAST of Cucsat.G16296 vs. ExPASy TrEMBL
Match: A0A0A0KPV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G320430 PE=3 SV=1)

HSP 1 Score: 617 bits (1592), Expect = 3.79e-221
Identity = 306/307 (99.67%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MSFTSSLVVSPNVELSPSNFGFLDSLRDGPQIPDSFRFFSRNRVPNLINKRQKWGNPSHS 60
           MSFTSSLVVSPNVELSPSNFGFLDSLRDGPQIPDSFRFFSRNRVPNLINKRQKWGNPSHS
Sbjct: 1   MSFTSSLVVSPNVELSPSNFGFLDSLRDGPQIPDSFRFFSRNRVPNLINKRQKWGNPSHS 60

Query: 61  TELKYPILCESGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120
           TELKYPILCESGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV
Sbjct: 61  TELKYPILCESGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD
Sbjct: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQLTNI 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQLTNI
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQLTNI 300

Query: 301 LRDVGEE 307
           LRDVGE+
Sbjct: 301 LRDVGED 307

[Close]

BLAST of Cucsat.G16296 vs. ExPASy TrEMBL
Match: T1RR20 (Phytoene synthase OS=Cucumis melo OX=3656 GN=PSY1 PE=3 SV=1)

HSP 1 Score: 593 bits (1528), Expect = 2.10e-211
Identity = 295/307 (96.09%), Postives = 301/307 (98.05%), Query Frame = 0


Query: 1   MSFTSSLVVSPNVELSPSNFGFLDSLRDGPQIPDSFRFFSRNRVPNLINKRQKWGNPSHS 60
           MSF SSLVVS NVELSPS+FGFLDS+RDGPQIPDSFRF SRNRVPNLINK+QKWGN SHS
Sbjct: 1   MSFASSLVVSSNVELSPSSFGFLDSVRDGPQIPDSFRFSSRNRVPNLINKKQKWGNHSHS 60

Query: 61  TELKYPILCESGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120
           TELKYPIL ESGYGSVI ASMVANPAGE+AVSAEQKVYNVVMKQAALVKRQLRTAGELDV
Sbjct: 61  TELKYPILHESGYGSVIVASMVANPAGEIAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD
Sbjct: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQLTNI 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPES+ASTESVYNAALALGIANQLTNI
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQLTNI 300

Query: 301 LRDVGEE 307
           LRDVGE+
Sbjct: 301 LRDVGED 307

[Close]

BLAST of Cucsat.G16296 vs. ExPASy TrEMBL
Match: D3K302 (Phytoene synthase OS=Cucumis melo OX=3656 GN=PSY PE=2 SV=1)

HSP 1 Score: 590 bits (1522), Expect = 1.72e-210
Identity = 294/307 (95.77%), Postives = 300/307 (97.72%), Query Frame = 0


Query: 1   MSFTSSLVVSPNVELSPSNFGFLDSLRDGPQIPDSFRFFSRNRVPNLINKRQKWGNPSHS 60
           MSF SSLVVS NVELSPS+FGFLDS+RDGPQIPDSFRF SRNRVPNLINK+QKWGN SH 
Sbjct: 1   MSFASSLVVSSNVELSPSSFGFLDSVRDGPQIPDSFRFSSRNRVPNLINKKQKWGNHSHY 60

Query: 61  TELKYPILCESGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120
           TELKYPIL ESGYGSVI ASMVANPAGE+AVSAEQKVYNVVMKQAALVKRQLRTAGELDV
Sbjct: 61  TELKYPILHESGYGSVIVASMVANPAGEIAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD
Sbjct: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQLTNI 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPES+ASTESVYNAALALGIANQLTNI
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQLTNI 300

Query: 301 LRDVGEE 307
           LRDVGE+
Sbjct: 301 LRDVGED 307

[Close]

BLAST of Cucsat.G16296 vs. ExPASy TrEMBL
Match: U5KQ18 (Phytoene synthase OS=Citrullus lanatus OX=3654 GN=psy PE=2 SV=1)

HSP 1 Score: 587 bits (1512), Expect = 5.74e-209
Identity = 289/307 (94.14%), Postives = 299/307 (97.39%), Query Frame = 0


Query: 1   MSFTSSLVVSPNVELSPSNFGFLDSLRDGPQIPDSFRFFSRNRVPNLINKRQKWGNPSHS 60
           MSF  SLVVSPNVELSPS+FGFLDS+RDG QIPDS RFFSRNR  NL++K+QKWGN SHS
Sbjct: 1   MSFAPSLVVSPNVELSPSSFGFLDSVRDGSQIPDSSRFFSRNRAANLMSKKQKWGNHSHS 60

Query: 61  TELKYPILCESGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120
           TELKYPILCE GYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV
Sbjct: 61  TELKYPILCEGGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD
Sbjct: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQLTNI 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVP+MGIAP+S+ASTESVYN+ALALGIANQLTNI
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPIMGIAPDSQASTESVYNSALALGIANQLTNI 300

Query: 301 LRDVGEE 307
           LRDVGE+
Sbjct: 301 LRDVGED 307

[Close]

BLAST of Cucsat.G16296 vs. ExPASy TrEMBL
Match: F8U9A8 (Phytoene synthase OS=Cucumis melo OX=3656 GN=PSY1 PE=3 SV=1)

HSP 1 Score: 582 bits (1499), Expect = 5.67e-207
Identity = 292/308 (94.81%), Postives = 298/308 (96.75%), Query Frame = 0


Query: 1   MSFTSSLVVSPNVELSPSNFGFLDSLRDGPQIPDSFRFFSRNRVPNLINKRQKWGNPSHS 60
           MS  SSLVVS NVELSPS+FGFLDS+RDGPQIPDSFRF SRNRVPNLINK+QKWGN SHS
Sbjct: 1   MSLASSLVVSSNVELSPSSFGFLDSVRDGPQIPDSFRFSSRNRVPNLINKKQKWGNHSHS 60

Query: 61  TELKYPILCESGYGSVIAASMVANPAGEMAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120
           TELKYPIL ESGYGSVI ASMVANPAGE+AVSAEQKVYNVVMKQAALVKRQLRTAGELDV
Sbjct: 61  TELKYPILHESGYGSVIVASMVANPAGEIAVSAEQKVYNVVMKQAALVKRQLRTAGELDV 120

Query: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180
           KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV
Sbjct: 121 KPDIVLPGTLSLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELV 180

Query: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240
           DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD
Sbjct: 181 DGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMD 240

Query: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESEASTESVYNAALALGIANQLT-N 300
           LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPES+ASTESVYNAALALGIANQ   N
Sbjct: 241 LRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQAPPN 300

Query: 301 ILRDVGEE 307
           ILRDVGE+
Sbjct: 301 ILRDVGED 308

The following BLAST results are available for this feature:

BLAST of Cucsat.G16296 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49293	1.4e-165	94.81	Phytoene synthase, chloroplastic OS=Cucumis melo OX=3656 GN=PSY PE=2 SV=1	[more]
P37272	6.7e-115	70.74	Bifunctional 15-cis-phytoene synthase, chromoplastic OS=Capsicum annuum OX=4072 ...	[more]
P37271	1.2e-111	73.21	Phytoene synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSY1 PE=1 SV...	[more]
P08196	2.6e-111	67.53	Phytoene synthase 1, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PSY1 PE=1 ...	[more]
P53797	1.3e-110	73.63	Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus OX=39639 GN=PSY PE...	[more]

BLAST of Cucsat.G16296 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148907.1	7.82e-221	99.67	phytoene synthase, chloroplastic [Cucumis sativus] >XP_031741913.1 phytoene synt...	[more]
XP_008463168.1	4.35e-211	96.09	PREDICTED: phytoene synthase, chloroplastic isoform X1 [Cucumis melo] >AGN48017....	[more]
NP_001284425.1	3.56e-210	95.77	phytoene synthase, chloroplastic [Cucumis melo] >ADC34069.1 phytoene synthase [C...	[more]
AGT57744.1	1.19e-208	94.14	phytoene synthase [Citrullus lanatus]	[more]
XP_038875566.1	5.60e-207	93.81	phytoene synthase, chloroplastic [Benincasa hispida] >XP_038875567.1 phytoene sy...	[more]

BLAST of Cucsat.G16296 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPV0	3.79e-221	99.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G320430 PE=3 SV=1	[more]
T1RR20	2.10e-211	96.09	Phytoene synthase OS=Cucumis melo OX=3656 GN=PSY1 PE=3 SV=1	[more]
D3K302	1.72e-210	95.77	Phytoene synthase OS=Cucumis melo OX=3656 GN=PSY PE=2 SV=1	[more]
U5KQ18	5.74e-209	94.14	Phytoene synthase OS=Citrullus lanatus OX=3654 GN=psy PE=2 SV=1	[more]
F8U9A8	5.67e-207	94.81	Phytoene synthase OS=Cucumis melo OX=3656 GN=PSY1 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002060	Squalene/phytoene synthase	PFAM	PF00494	SQS_PSY	coord: 14..262 e-value: 3.8E-70 score: 236.4
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 9..271 e-value: 4.6E-85 score: 287.3
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 14..276
None	No IPR available	SFLD	SFLDS00005	Isoprenoid_Synthase_Type_I	coord: 13..275 e-value: 0.0 score: 299.1
None	No IPR available	PANTHER	PTHR31480:SF2	PHYTOENE SYNTHASE, CHLOROPLASTIC	coord: 10..280
IPR044843	Trans-isoprenyl diphosphate synthases, bacterial-type	SFLD	SFLDG01212	Phytoene_synthase_like	coord: 13..275 e-value: 0.0 score: 299.1
IPR044843	Trans-isoprenyl diphosphate synthases, bacterial-type	PANTHER	PTHR31480	BIFUNCTIONAL LYCOPENE CYCLASE/PHYTOENE SYNTHASE	coord: 10..280
IPR019845	Squalene/phytoene synthase, conserved site	PROSITE	PS01044	SQUALEN_PHYTOEN_SYN_1	coord: 114..129
IPR019845	Squalene/phytoene synthase, conserved site	PROSITE	PS01045	SQUALEN_PHYTOEN_SYN_2	coord: 150..175
IPR033904	Trans-isoprenyl diphosphate synthases, head-to-head	CDD	cd00683	Trans_IPPS_HH	coord: 14..264 e-value: 6.57659E-102 score: 296.454

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G16296.T8	Cucsat.G16296.T8	mRNA
Cucsat.G16296.T1	Cucsat.G16296.T1	mRNA
Cucsat.G16296.T4	Cucsat.G16296.T4	mRNA
Cucsat.G16296.T10	Cucsat.G16296.T10	mRNA
Cucsat.G16296.T2	Cucsat.G16296.T2	mRNA
Cucsat.G16296.T7	Cucsat.G16296.T7	mRNA
Cucsat.G16296.T14	Cucsat.G16296.T14	mRNA
Cucsat.G16296.T18	Cucsat.G16296.T18	mRNA
Cucsat.G16296.T16	Cucsat.G16296.T16	mRNA
Cucsat.G16296.T5	Cucsat.G16296.T5	mRNA
Cucsat.G16296.T3	Cucsat.G16296.T3	mRNA
Cucsat.G16296.T6	Cucsat.G16296.T6	mRNA
Cucsat.G16296.T15	Cucsat.G16296.T15	mRNA
Cucsat.G16296.T11	Cucsat.G16296.T11	mRNA
Cucsat.G16296.T13	Cucsat.G16296.T13	mRNA
Cucsat.G16296.T19	Cucsat.G16296.T19	mRNA
Cucsat.G16296.T12	Cucsat.G16296.T12	mRNA
Cucsat.G16296.T9	Cucsat.G16296.T9	mRNA
Cucsat.G16296.T17	Cucsat.G16296.T17	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0009058	biosynthetic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0010287	plastoglobule
molecular_function	GO:0004311	farnesyltranstransferase activity
molecular_function	GO:0016767	geranylgeranyl-diphosphate geranylgeranyltransferase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups