Cucsat.G16075 (gene) Cucumber (B10) v3

Overview
NameCucsat.G16075
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionTranscriptional adapter
Locationctg2185: 96829 .. 106912 (+)
RNA-Seq ExpressionCucsat.G16075
SyntenyCucsat.G16075
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CATAACATATACACGCTCTGCCTCTCTCGTTCCCTCTCAGCCCTGACCTCTCGCGGAACCCGACGACGGCAATTCTCCGCTCTCCGCCGCCGCCTCGAACTCCGGCGACACTCGAATTCTGGCTGCACTAGGCGAATCCTGAACAAAGGTCAAAACAATTTTGTGCTCTCGTTTTCTTTGTTACTGATATTTGGTTATTCGGATCGATGGGTCGTTCTCGGATGGTGTCTCGTCCGGAAGATGAGGACTCAAATCAGAGGTTTGTGCTTTTCATTTAAGCGTTCTAGCTATGAATTCGAGCTAATCTGATTCTGAATTGCTGGAAATTTTAGCTATTGAGAATGCGTTACATTTTGTTAATTGCATGAGACTCTTCTTATGTTTCGTCTGAATGAATTTATAATTTGTATTATGTTTCTTGGAAACCGAACATGAGTTGAAGGGGATACTAGCTATCTGCTTTTAATCAAGTCTGCCAGGTTCTTAACTGTCAGAATATAATCACTAATGATTTAATCTCAAAATGCCACCTAAACTGAAAGGCGTGGTTTGTGTAGGATCCTGAATTGTTCATTTCATTGGGATACAAGTTTAAAAATGAGATGAACTGAAATTCTTATTCTGTATTTTCTTCGTATAATCTCTTGTTTGATTGAATGTGTGTGACACTGCAGTTTATCATTTTTGTTTCAGAAGAGTATGTTCTTGGTTAAATTAATTCTTGGTGTTAAGTTGTCCTTTATTTTTGTGCAAAATTCTTCCATTTGGCTCTCATGTTGTTCTTCTCTGAATCCATTGTTCAGTAAATCCAAGAGGAAAAGGCCTAGTTCCACAGAGGCTACGAATCCAGCTACAGGTATTCTGCTTTAATATCATTGGAGAGATTGAAGAAAATGGGTCCAATATTTCATTTATGGTTTACTAAAGGTTGTAGTGCCTTATTTCACTCGGAGAAGCAATTTTTACACAATCCTCTAAAGTCATGTTGCGCTTTCTTTTATGAATTAGTGAAGGTTCTGGTTCCTTATTTCACTCATAGATGCAATTTTTACACAATCCCCTAAAGTCATAGTGTGTTTTCAGTAATGTGCTTTCAGCCGTTTTTCAATCTTTTTGGCTCATGTCAACGGTTTCTTTTTTGGGCTGTTAGGATGGTAGGTCAAGAAATGAGTGATTAAAGAAGGGCCTTTACAGTTGGGTTACAGTAATGTGATTTCTGCAGTTTTCTGTTTTCTTTTCTTATTTTACCCTGGCCATTGTATAACTTCAACTGTTATCTTAGTAGGTCAGGAATTGGGAGATGGAAAAGCAGCCTTATACCATTGTAATTACTGCAACAAAGATTTATCTGGAAGGATTCGCATAAAGTGTGTGGCATGTCCAGATTTTGACCTCTGTGTGGAGTGCTTTTCTGTTGGAGCAGAGCTTAGACCTCACAAAAGCAACCATCCTTATAGGGTTATGGTGAGTATCCTGTATCCTTATTAGTATTACTATATGTTATTACTATGGCTCATGTTACTTAAACCATTAGGCATAGTTGTGTAGGATCTGCTATCTATTGAATCTACAGTGAGTGTTCAATCTTCTTCTATGCGTGCATAGAAACAAGCCCACCAAAACACCCCTCTAAAGGAAGGGGTTCCAACTAAGTAGAATGTTTCCAAGCAAATAATTACAAAAGGTCGTCGTAAGCGAAGCCCAAAGGGACACATGAAATCTAGCTAAGGACCAAACATTACAAGGGTCCCTTTCCCTACCTCTAAAGACCCTATCATTCCTCTTCCCCCAAATGTCCCTCACAAACCCCAACCATCCACCAAAAACAGCCTTTCTCCCTAAAAGGTGGATGGAAAAGGAACTCCTCGATTGTCCCATGAATGGTTCTCTAGCCAACCAAGCTAAAGTCAAACTTGTGCAGAAAAGAACTCCACATGGCCCGAACATACTGACAGTCTCAAAGAAGATAATCATGGTCTTCCTTTGCCTTCTGACAAAGGATACAACAGAAAGGCCTAACAAGCAAGGTTTTCCTTCTAACAAGGCTATCCATAGTGTTCACACGACTAAACAAAACTTGCCAAATAAAAAATCTAACTTTCTTAGGAAACTTAATCCTACGAACCACATAAAAACAAACTCTCTAGTGGGAGAGGGATCCAACAACAAAGAGAACAAGGACTTGCTTGAAAAACCTTGACTAGGTTGGGACACCAAACACGCACATCCCTTCTCCCTTCCCTAGATGAGCAGCCCTTAAGCAGAGAAAGAAGAGAAGCCACCTCCATCATTTATCTATTGGTTAAATGATGGCGGAACCCGAAAGAAAAGGACACCAAATTCTCAATCTAGCTAAAAAATTCCGAAATCAGATAGTGTTTTAAAAGAGGACAAATTATAGAGATGCGGAAACAAAGAGCAAAGAGAACTCTCCCCCACCCACTGATCCTCTGATATTCTTTCTTTTTTTTTTCTCAATGAAAGTAGTTACTTTAAAAAAAAAGAAAAAGAAAAATCTTCTATGCATTTTTTAACAAATATGTTCTAATGTATAAGGAGTGTGATAGACCCCCGATATTGTATCAATATAGTAGGAAAGGGAAGAAGGGTAGTGGCTCGTGTGTAGAATGACACGTGCGAGATATATTAGTATAAATAAAGAACAAGTAGTGGGCGGGAAAGTTAGTTAGAGTTTTGTTGAAGAAAAGTTTTTTGTTCTTCCTTGAGAGAGAGGATAACAGAAGAGTGTTCGAGTTTTATTTGTTTGTTCGAATTAGTGTTTGTACCCTAGATTCATATTTGAATCTACTATCAATAAAAGTAGAATTCAGTTTAGTTCTATTTTCCATCAAATTGCTATCAGAGCGTGATTCTGGGCGAGCAAGAAGATGGTGCAGACGAGGATTGAAGAAAAGATTGAAACGATAGACCAAGAGATTCATGGCATCAAGAAGGAGATCGGGAAACTGCTGGCGATTGAGAAAACGTTGAACAATATATCGAAGAACATGGAAAGACAAAATCAATTAATATTGAGAATTATGGAATCAGCCGCACAGGAGAGAACAACGATGAACGAAAGGATATCCGAATTGTCTATACATACTTTTTCGGTGAAGATTATAGATGAAGGCGAAGGATCTTCGAGGCGAGAAAGCGAAACGAACAACGAAGAGAAGAAACCGAATGAAGAAGGAAACAATGATCGAAACAAATTTAAGAAAGTGGAGATGCCTATATTCAACGGAGATGATCTCGATTCGTGGTTATTTTGCGCTGAAAGGTATTTTCTTATCCATAAACTCACTGAATCTGAAAAGATAACCGTATCTACTATTAGTTTCGAAGGACCGACATTGAATTGGTATCGTTCACAAGAAGAACGGGAGAAGTTTGTTGATTGGGCGAATATGAAGGGGAAAGGTTGTTAGTTAGATTCCGTTCGTCGAGGGAGGGATCTTTGTACAGGCGATTTTTGCGTATCCAACAAACAACAACCATGGATGAATATCAAAATTTATTCGATAAGTGGGTAGCACCACTATCAGATCTGCTCGAAAAAGTAGTAGAAGAAACCTTTATGTCGGGATTAAAACTATGGATCCAAGCAGAGATGGATTTCTGTGAGCCAAAAGGACGCCCGCATGATAAGGATAGCGCAAAAAATTGAAAACAGAGAAGATATTCGGCGTGAGGCAAATCTTCCCAGATATTCCGGAGGAAGAACAACTAATCCACAGAATAGTACCAAGACTAATACAAATGTGAATACTGGAGAAAATAAGGGAGGAATGAATTGGCCAATGAGAACCATCACTTTGCGAGGGACATCGAAAGAGGAAGTTCCAAAGGAGGGTCCAACAAAACGATTGTCTGATGCTGAATTCCAAGCTCGAAAGGAGAAGGGACTGTGTTTTCGGTGTAATGAGAAGTATTCTCACGACCATAAATGCAAGGCTAAGGAGTTGAGGGAATTACGAATGCTGGTAGTGAAGGAGGATAATGAAGAATATGAAATCATTGAAGATGGAAATAATGCTTTGAAGGAGTTGAATACCATCGAAATCATGGAAGAAGGCCAAGCGATAGTAGAATTATCTATGAACTCTGTAGTTGGATTGGACAATCTAGGGACAATGGAGGTGAAGGGAACGATACGAGGGAGAGAAATTGTGGTGTTAATAGATTGTGGAGCGACACACAACTTTGTTTCAGAACGACTTGTGAAGGAGTTACAACTGGAAACAAAAGAAACCTCAAACTATGGGGTAATTTTGGGTTTCGGTACTGCTATAAAAGGGAAAGGGATATGTGGAGCTGTGGAACTGATGTTAGGTGATTGGAAAGTGATTGATGAATTCTTACCCTTGGAGTTAGGAGGAGTAGATGCCATACTGAATATGCAGTGGCTTTATTCTTTGGGAATAACAGAGTAGATTGGAAGAACTTGATACTATCCTTTACGAATCAAGGAAAGAAGATTATAATACGAGGAGATCCTAGCTTGACTAAGGCTAGAGTGAGCCAGAAAAACTTAGTAAAAACTTGGGGGAAGAGGATCAAGGCTATTTAGTAGAATACAGAGCCTTGGAAAGATGTGATTTGTCTGAAGAAGAAGACTTGATCGAAGAAATATTAACTGAAGAAGAGTCGGTAGCTGTGGTGTTGAAAAGATTTGAAGATGTTTTCGAGTGGCCAGAGACTTTGCCTCCTTGGCGGATAATAGAACATCACATCCATTTGAAAGAGGGAGTGAATCCAGTTAATGTACGGCCATATCGATATGCTTATCAACAAAAAAATGAAATGGAGAAGTTAGTTGAAGAGATGTTATAATCAGGGATAATACGGCCAAGCACGAGTCCTTATTCGAGCCCTGTATTACTGGTGAGAAAAAAAGATGGAAGTTGGCGGTTTTGCGTAGACTACAGAGCCTTGAATAACGTGACTGTGCCTGACAAATTTCCAATTCCAGTAATTGAAGAGTTATTTGATGAGTTAGATGGAGCTGTTATATTTACTAAGATTGATTTGAAGGCAGGGTATCATCAGATTCGAATGTGTGCAGATGATATTGAGAAGACTGCGTTTAGGACTCATGAAGGTCACTATGAGTTCATGGTGATGCCATTTGGACTAACAAATGCACCATCAACTTTCCAATCATTAATGAATGCTATATTCAAGCCGTATCTCATAAAGTTTGTGCTGGTATTCTTTGATGATATACTGATTTACAGCAAGAATTTAAAGGCTCATTTGGATCACATCAAAGCAGTGTTAGAAGTATTGCGAAAAAATGAATTGTATGCAAACAAAAAGAAGTGCAGCTTTGCCAAAGCAAGGGTAGAATACCTGGGGCATATCATATCTGGAGGAGGAGTAGAGGTGGATCCGGAGAAAATTAGAGCCATCAAAGAATGGCCTATTCCAACTAACGTGAGAGAAGTTCGAGGATTTTTGGGATTGACTGGATATTATCAAAAATTTGTAAAGCATTATGGGACGATAGCAGCACCTCTGACCCAATTACTTAAAAAAGGGGGATTTAGATGGACTGAGGAGACTCAAGAAGCCTTTGTTAAGTTGCAAATGACCATGATGACATTGCCCATGTTAGCAATGCCAGATTTTAGCATTCCATTTGAGATTGAAACGGATGCTTCTGGATATGGGTTGGGTGCAGTGTTAATACAAAACCAAAGACCTATTGCTTATTATAGTCATACTCTAGCAGTTAGAGATAGAGTTAAACCAGTTTATGAAAGGGAATTGATGGCTGTAGTAATGACAGTACAGAGATGGCGTCCCTATTTATTGGGGAAGAGATTCAAGGTGAAAACTGATCCGCGGTCATTAAAATTCTTGCTGGAACAACGGGTGATTCAGCCCCAGTACCAAAAGTGGATATCTAAGCTTTTAGGATATTCATTTGAGGTGATATATAAGCCGGGGTTAGAAAACAAGGCTGCTGACGCGTTGTCTAGAATACCTCCAACCGTCCATTTGAATCAACTGACAGCTCCAAACATAATTGATGTGGCAGTAATTAAAGAAGAGGTCAATCAAGATGAGAGACTTAAGAAGATCAGAGGAGAATTAGAAGAAAAAGGTGAGCAGCAGCCCAGTAAATACTCTATGAAGCAAGGGATGTTGATGTATAAGAATCGTATGGTAATTTCCAAAACTTCCAAACTAATCGCTATGATCTTACATACTTTTCATAATTCGGTATTTGGAGGACATTCAGGGTTTCTACGAACATACAAGAGGTTGACTGGAGAGTTATATTGGGAAGGGATGAAACAATATGTTAAAAAATATTGTGAAGAGTGCATGATTTGTCAAAGAAATAAAACTTTGGCATTATCTCCAGCAGGGTTGTTAACACCCTTGGAAGTTCCTAATAGAGTGTGGGAAGAGATTTCCATGGATTTTGTAGATGGATTACCAAAAGAAAATGGGTTTGAGGTTATCTTTGTAGTGGTAGACCGTTTCAGACTTTCAGTAAATATGGTCACTTTTTTACCAATGAAACATCCCTATAATGCGAAGTCTTTAGCTGAATTGTTTGTTAAAGAAGTTGTGAGACTACACGACTTTCCAAAGTCCATAGTGTCAGATATAGATAAGGTGTTTTTGAGTTCCTTCTGGAAAGAGTTATTCAGACTAGCAGGCACAAGATTGAATCATAGTACTGCATATCATCCTCAGTCAGATGGACAAACAGAAGTAGTTAATCGAGGAGTAGCGATTTATTTACTATGTTTTTGTGGAGAAAAACTGAAGGAGTGGGTGAAATGGATACCATGGGCTAAATATTGGTATAACACTACATATCAGCGGTCGTTGGGTATCACGCCATTTCAGGCAGTATATGGCAGATTACCTCCTCCATTGATATATTATGGGGTTAGAGATACATCGAATTCAACATTGGATGAACAACTGAAAGAGAGAGATGTAGCTTTGGATGCTTTGAAGGAACATTTACAAGTGGCACAGGATAAGATGAAAAAATATGCTGATTTGAAGAGGAGAGACGTACAGTATCAAGTAGGAGATTTGGTCTTATTGAAATAAGGCCTTATCGGCAAGTATCATTGAGAAGAAAGAGGAATGAGAAGCTCTCTGCTAAATATTTTGGGCCTTATAAAGTGATTGAAAGGGTTGGGCCAGTAGCATATAAACTGGAGTTACCTGCACAGGCAGCCATACATCCAGTTTTTCATGTATCTCAGCTGAAGAAAGTGTTTGGAACACGAGGAGAATTGTGATGATATTCCATACTTATCAGAGAATTATGAATGGAGGGCTATGCCAGAAGAAGTGTATGGATATTTGAAGAATAAGGCTGGAAGTTGGGATGTGTTAGTGAGTTGGAAGGGTCTACCGAGACATGAGGCAACATGGGAGTTATATGAAGATTTGCAACAGCGATTTCCAGATTTTCACCTTGAGGACAAGGTGAATTTGAAGAGGGAGAGTAATGATAGACCCCCGATATTGTATCAATATACTAGGAAAGGGAAGAAGGGTAGTGGCTCGTGTGTAGAATGACACGTGCGAGATATATTAGTATAAATAAAGAACAAGTAGTGGGCAGGAAAGTTAGTTAGAGTTTTGTTGAAGAAAAGTTTTTTGTTCTTCCTTGAGAGAGAGGATAACAGAAGAGCGTTTGAGTTTTATTTGTTTGTTCGAATTAGTGTTTGTACCCTAGATTCATATTTGAATCTACTATCAACAAAAATAGAATTCAGTTTAGTTCTGGTTTCCATCAGAGTGAGAAGTCCCTTGCAAACAACTTGATGCTGTTAATAATGCAGTTATGGATATCAACTCAAACTTGCAAATGGGTTATTACTTATAATTTATGATGTAAACTTTTATTTCCTGTCTCCTGACATCTGCTTTTTTCTTTTCCTTTTTTCTTTTTCTTAAATGGAGACAAGCCTCAATAACAAAAACAAAAACAGCAATAATAGTGAGCTGTTCTTTACTAATGAACACTAATATTTATACTAGTTTGTACTAACTTAATGCTTAAGTAACCTGAGCCTCCAACAGCTACATTAGCCTTCAAAACTATTTTCCTATTGACTAGCCTTCCATGGAAAGTTTTACAAATAAAACAGATTTTGACTGTCAAACACCCACATCCATTTACCTCATCCCTTCTCAAAGATCATAGATGTCTACTTTTCAATAGAACCTTCATAAGAAGTTGAGATGAATGTGTGTGTGTGGATTTGAGATAGGCTATAATAATAATAATAAAATTGCATCTTAGACACCATAAGGAAGAGTTTGCTTGTACAGTATAGAAATAGAAATCAACATTGTTAGACGTGTTTTCCAAGACCTTCCGATTCCACTCCTTCCAAAATCCGAATTTCCCAAAGCTTCCAAATTTCCCAAAAGGAAAGCTTGAACTACAATTTTCGACAAAATCTTTGTTTTTCCTTTTAAGGTTCCACCCATTTAAAGCTGTGAAAGCAACTCCACCAAATTTGGCAAGTGAAGAGACAAACAAAAAGTCTTTAATAGCAGATTCCAACCACTCAAAGAAAAAAGTATTCAGATAAATGAATGATCGGCATTTTCTTCATCCTTCAATCATAAGCTACAAGCCGAAGGTGAAAGGCTCTACTAGCAACTTCCTCTGTATTCTGTCATTTGTTTTCAAGTATTTTAAGAAGCACAAACATAGGTCCATGTTCAACACACGCCAAACACTTGTTGGACATGTATCAGACACTTGTTAGTGTAATAAATGTGTTAGACATGCATAGAAAGAACACTTGTTGAGTAAAATGAAAAGACATATATGACAATAACAATAAGTTTGATTGTGAAATACATCAAACTAATTTTTTAAGCATATAACTGCATGTACTTTGAATTTTGTTCGGGTAAAAAAGTGTTATATATTTTTAAAAAGGTAAATTGTAACAAGAGTGTCACTGCCATGTCTGTGTCCTAAATTTAAAATATGTGACATGTCGCTATGATAGTGTCATGTCTGTGTCCCATATCTGTATCTTTGCTTTTTAGCGCAAGTGTTTACAAGCCAAACTCCAAAGGAAAAGTTAATCTTTTTTGAAACATTAAACTACCATATCACATTTCAATCAACGGGGTTGTAAGCTTGTGGGAAGTTTCAGTGAGTTTGATGAAAGCTGATTTTGTAGAGAGAAAAAATCCCATTTTTCTCCAGGGACCAGGACATTATGTCCATACCATGACATAATCTCATAGTATGATCAGCCCAACCAAGCCTATCCAACTATCAAGTACCCTGTCTAGAACATTCTGCATCTGTGGCGTCTTGTTTCTCGGAGAAAAGGTAAATGTCTGGGAAGATTTCTTCAGAGAAGAGGATCCAAACCGCTTGTCTGTTCAAAACTTAATTTTGCCCCCATTTTACCTCAAAATTTATGAAGTGAAAAGGAAGTTACTGTTTCTTTGTGATCTCAAACCGGCTTACGTTTTGAAATACCCTGCTCCAGTCACAATATCAAGTAGATCAAGTTTATTGAATTGATTCCATCATTGTTGTTGTGGACCCATTAACCTTCAAAAGCGTTTATTATTTAAAGAAAGCTACACTTAAATGTTACTAAGTTTTAAGATATTTCCACTTTTAAGAGAACAAATAAAAGAGTACATATACTGTATTTGTTTAAAGCAAGAAACAAACTTTGTGAAAAGTAAAAAGCACAAAATAAAGTTCAAATGATAAAATCACATTGAAATATGTGTGTTCCCCTCCGTAAGTAAACAAGACCCCCCTACAATTTGAATTTATTACAAAGGGAGAGTAGTCTCCTTTTTTTCTTTTCTTTTTTTCCTTTTTCCTCTTTGCTTATTGAAAAACTATCTACTCTTTTTGAAACTTAATGGTTTTATAACAGTTTTTTTAATCTATATCCATTAATTATCATTGTTGTCTCTTTATTTAATGGATCTGAGTTGCTTAAAATATTGATTTGATTGTTAACACATTAACTCATTAGATGGAAATATTTTTTCTGACAGGATAATTTGTCATTTCCTCTTCTATGTCCAGATTGGCATGCAGATGAGGAGAGC

Coding sequence (CDS)

ATGGGTCGTTCTCGGATGGTGTCTCGTCCGGAAGATGAGGACTCAAATCAGAGTAAATCCAAGAGGAAAAGGCCTAGTTCCACAGAGGCTACGAATCCAGCTACAGGTCAGGAATTGGGAGATGGAAAAGCAGCCTTATACCATTGTAATTACTGCAACAAAGATTTATCTGGAAGGATTCGCATAAAGTGTGTGGCATGTCCAGATTTTGACCTCTGTGTGGAGTGCTTTTCTGTTGGAGCAGAGCTTAGACCTCACAAAAGCAACCATCCTTATAGGGTTATGAGCGTGATTCTGGGCGAGCAAGAAGATGGTGCAGACGAGGATTGA

Protein sequence

MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMSVILGEQEDGADED
Homology
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BLAST of Cucsat.G16075 vs. ExPASy Swiss-Prot
Match: Q75LL6 (Transcriptional adapter ADA2 OS=Oryza sativa subsp. japonica OX=39947 GN=ADA2 PE=2 SV=2)

HSP 1 Score: 161.4 bits (407), Expect = 6.0e-39
Identity = 75/116 (64.66%), Postives = 89/116 (76.72%), Query Frame = 0 

Query: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT----GQELGDGKAALYHCNYCNKDL 60
           MGRSR V    D+++N    +R+  SS +A +  +    G   G GK ALYHCNYCNKD+
Sbjct: 1   MGRSRGVPNSGDDETNHRSKRRRVASSGDAPDSLSAACGGAGEGGGKKALYHCNYCNKDI 60

Query: 61  SGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEE 113
           SG+IRIKC  CPDFDLCVECFSVGAE+ PH+SNHPYRVMDNLSFPL+CPDW+ADEE
Sbjct: 61  SGKIRIKCSKCPDFDLCVECFSVGAEVTPHRSNHPYRVMDNLSFPLICPDWNADEE 116

[Close]
BLAST of Cucsat.G16075 vs. ExPASy Swiss-Prot
Match: Q9SFD5 (Transcriptional adapter ADA2a OS=Arabidopsis thaliana OX=3702 GN=ADA2A PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.2e-33
Identity = 71/116 (61.21%), Postives = 84/116 (72.41%), Query Frame = 0 

Query: 1   MGRSRMVSRPEDEDSNQSKSKRKRPS---STEATNPATGQELG-DGKAALYHCNYCNKDL 60
           MGRS++ SRP +ED N  KSKRK+ S      A + +TG E G + K  LY CNYC+KDL
Sbjct: 1   MGRSKLASRPAEEDLNPGKSKRKKISLGPENAAASISTGIEAGNERKPGLYCCNYCDKDL 60

Query: 61  SGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEE 113
           SG +R KC  C DFDLCVECFSVG EL  HK++HPYRVMDNLSF L+  DW+ADEE
Sbjct: 61  SGLVRFKCAVCMDFDLCVECFSVGVELNRHKNSHPYRVMDNLSFSLVTSDWNADEE 116

[Close]
BLAST of Cucsat.G16075 vs. ExPASy Swiss-Prot
Match: Q9ATB4 (Transcriptional adapter ADA2b OS=Arabidopsis thaliana OX=3702 GN=ADA2B PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 7.4e-29
Identity = 64/115 (55.65%), Postives = 81/115 (70.43%), Query Frame = 0 

Query: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSST---EATNPATGQELGDGKAALYHCNYCNKDLS 60
           MGRSR  +    ED  Q   K+K  ++    E+T+   G E G GK   Y+C+YC KD++
Sbjct: 1   MGRSR-GNFQNFEDPTQRTRKKKNAANVENFESTSLVPGAE-GGGK---YNCDYCQKDIT 60

Query: 61  GRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEE 113
           G+IRIKC  CPDFDLC+EC SVGAE+ PHK +HPYRVM NL+FPL+CPDW AD+E
Sbjct: 61  GKIRIKCAVCPDFDLCIECMSVGAEITPHKCDHPYRVMGNLTFPLICPDWSADDE 110

[Close]
BLAST of Cucsat.G16075 vs. ExPASy Swiss-Prot
Match: Q02336 (Transcriptional adapter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ADA2 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.0e-18
Identity = 32/66 (48.48%), Postives = 47/66 (71.21%), Query Frame = 0 

Query: 47  YHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPD 106
           +HC+ C+ D + R+R+ C  CP++DLCV CFS G+    H+  H YR+++  S+P+LCPD
Sbjct: 5   FHCDVCSADCTNRVRVSCAICPEYDLCVPCFSQGSYTGKHRPYHDYRIIETNSYPILCPD 64

Query: 107 WHADEE 113
           W ADEE
Sbjct: 65  WGADEE 70

[Close]
BLAST of Cucsat.G16075 vs. ExPASy Swiss-Prot
Match: Q9P7J7 (Transcriptional adapter 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ada2 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.8e-17
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 0 

Query: 47  YHCNYCNKDLSGRIRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPD 106
           YHCN C +D++  I I+CV C DFDLC+ CF+ GA L  H  +HPYR+++  S+P+   +
Sbjct: 6   YHCNVCAQDITRSIHIRCVECVDFDLCIPCFTSGASLGTHHPSHPYRIIETNSYPIFDEN 65

Query: 107 WHADEE 113
           W ADEE
Sbjct: 66  WGADEE 71

[Close]
BLAST of Cucsat.G16075 vs. NCBI nr
Match: KAA0049795.1 (transcriptional adapter ADA2-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 231 bits (589), Expect = 2.33e-74
Identity = 112/114 (98.25%), Postives = 112/114 (98.25%), Query Frame = 0 

Query: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT-GQELGDGKAALYHCNYCNKDLSGR 60
           MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT GQE GDGKAALYHCNYCNKDLSGR
Sbjct: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATVGQESGDGKAALYHCNYCNKDLSGR 60

Query: 61  IRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES 113
           IRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES
Sbjct: 61  IRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES 114

[Close]
BLAST of Cucsat.G16075 vs. NCBI nr
Match: XP_004139846.1 (transcriptional adapter ADA2a isoform X2 [Cucumis sativus])

HSP 1 Score: 238 bits (607), Expect = 1.38e-73
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRI 60
           MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRI
Sbjct: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRI 60

Query: 61  RIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES 113
           RIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES
Sbjct: 61  RIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES 113

[Close]
BLAST of Cucsat.G16075 vs. NCBI nr
Match: XP_016900505.1 (PREDICTED: transcriptional adapter ADA2-like isoform X2 [Cucumis melo])

HSP 1 Score: 236 bits (601), Expect = 1.08e-72
Identity = 112/113 (99.12%), Postives = 112/113 (99.12%), Query Frame = 0 

Query: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRI 60
           MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQE GDGKAALYHCNYCNKDLSGRI
Sbjct: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQESGDGKAALYHCNYCNKDLSGRI 60

Query: 61  RIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES 113
           RIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES
Sbjct: 61  RIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES 113

[Close]
BLAST of Cucsat.G16075 vs. NCBI nr
Match: XP_031744982.1 (transcriptional adapter ADA2a isoform X3 [Cucumis sativus])

HSP 1 Score: 233 bits (595), Expect = 7.70e-72
Identity = 113/114 (99.12%), Postives = 113/114 (99.12%), Query Frame = 0 

Query: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT-GQELGDGKAALYHCNYCNKDLSGR 60
           MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT GQELGDGKAALYHCNYCNKDLSGR
Sbjct: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATVGQELGDGKAALYHCNYCNKDLSGR 60

Query: 61  IRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES 113
           IRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES
Sbjct: 61  IRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES 114

[Close]
BLAST of Cucsat.G16075 vs. NCBI nr
Match: XP_011658944.1 (transcriptional adapter ADA2a isoform X1 [Cucumis sativus] >KGN44365.2 hypothetical protein Csa_015928 [Cucumis sativus])

HSP 1 Score: 233 bits (595), Expect = 8.61e-72
Identity = 113/114 (99.12%), Postives = 113/114 (99.12%), Query Frame = 0 

Query: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT-GQELGDGKAALYHCNYCNKDLSGR 60
           MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT GQELGDGKAALYHCNYCNKDLSGR
Sbjct: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATVGQELGDGKAALYHCNYCNKDLSGR 60

Query: 61  IRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES 113
           IRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES
Sbjct: 61  IRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES 114

[Close]
BLAST of Cucsat.G16075 vs. ExPASy TrEMBL
Match: A0A5A7U850 (Transcriptional adapter ADA2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G001570 PE=4 SV=1)

HSP 1 Score: 231 bits (589), Expect = 1.13e-74
Identity = 112/114 (98.25%), Postives = 112/114 (98.25%), Query Frame = 0 

Query: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT-GQELGDGKAALYHCNYCNKDLSGR 60
           MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT GQE GDGKAALYHCNYCNKDLSGR
Sbjct: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATVGQESGDGKAALYHCNYCNKDLSGR 60

Query: 61  IRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES 113
           IRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES
Sbjct: 61  IRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES 114

[Close]
BLAST of Cucsat.G16075 vs. ExPASy TrEMBL
Match: A0A0A0K8H2 (Transcriptional adapter OS=Cucumis sativus OX=3659 GN=Csa_7G179630 PE=4 SV=1)

HSP 1 Score: 238 bits (607), Expect = 6.67e-74
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRI 60
           MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRI
Sbjct: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRI 60

Query: 61  RIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES 113
           RIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES
Sbjct: 61  RIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES 113

[Close]
BLAST of Cucsat.G16075 vs. ExPASy TrEMBL
Match: A0A1S4DXR8 (Transcriptional adapter OS=Cucumis melo OX=3656 GN=LOC103490126 PE=4 SV=1)

HSP 1 Score: 236 bits (601), Expect = 5.22e-73
Identity = 112/113 (99.12%), Postives = 112/113 (99.12%), Query Frame = 0 

Query: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRI 60
           MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQE GDGKAALYHCNYCNKDLSGRI
Sbjct: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQESGDGKAALYHCNYCNKDLSGRI 60

Query: 61  RIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES 113
           RIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES
Sbjct: 61  RIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES 113

[Close]
BLAST of Cucsat.G16075 vs. ExPASy TrEMBL
Match: A0A1S3BI16 (Transcriptional adapter OS=Cucumis melo OX=3656 GN=LOC103490126 PE=4 SV=1)

HSP 1 Score: 231 bits (589), Expect = 3.25e-71
Identity = 112/114 (98.25%), Postives = 112/114 (98.25%), Query Frame = 0 

Query: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT-GQELGDGKAALYHCNYCNKDLSGR 60
           MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPAT GQE GDGKAALYHCNYCNKDLSGR
Sbjct: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATVGQESGDGKAALYHCNYCNKDLSGR 60

Query: 61  IRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES 113
           IRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES
Sbjct: 61  IRIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES 114

[Close]
BLAST of Cucsat.G16075 vs. ExPASy TrEMBL
Match: A0A6J1IMU7 (Transcriptional adapter OS=Cucurbita maxima OX=3661 GN=LOC111476993 PE=4 SV=1)

HSP 1 Score: 221 bits (564), Expect = 1.64e-67
Identity = 105/113 (92.92%), Postives = 107/113 (94.69%), Query Frame = 0 

Query: 1   MGRSRMVSRPEDEDSNQSKSKRKRPSSTEATNPATGQELGDGKAALYHCNYCNKDLSGRI 60
           MGRSRMVSRPEDED NQSKSKRKRPSSTEATN ATGQE  DGK ALYHCNYCNKDLSGRI
Sbjct: 1   MGRSRMVSRPEDEDPNQSKSKRKRPSSTEATNQATGQESRDGKVALYHCNYCNKDLSGRI 60

Query: 61  RIKCVACPDFDLCVECFSVGAELRPHKSNHPYRVMDNLSFPLLCPDWHADEES 113
           R+KCVACPD+DLCVECFSVGAEL PHKSNHPYRVMDNLSFPLLCPDWHADEES
Sbjct: 61  RMKCVACPDYDLCVECFSVGAELTPHKSNHPYRVMDNLSFPLLCPDWHADEES 113

The following BLAST results are available for this feature:
BLAST of Cucsat.G16075 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q75LL66.0e-3964.66Transcriptional adapter ADA2 OS=Oryza sativa subsp. japonica OX=39947 GN=ADA2 PE... [more]
Q9SFD52.2e-3361.21Transcriptional adapter ADA2a OS=Arabidopsis thaliana OX=3702 GN=ADA2A PE=1 SV=1[more]
Q9ATB47.4e-2955.65Transcriptional adapter ADA2b OS=Arabidopsis thaliana OX=3702 GN=ADA2B PE=1 SV=1[more]
Q023362.0e-1848.48Transcriptional adapter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288... [more]
Q9P7J73.8e-1750.00Transcriptional adapter 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)... [more]
BLAST of Cucsat.G16075 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0049795.12.33e-7498.25transcriptional adapter ADA2-like isoform X1 [Cucumis melo var. makuwa][more]
XP_004139846.11.38e-73100.00transcriptional adapter ADA2a isoform X2 [Cucumis sativus][more]
XP_016900505.11.08e-7299.12PREDICTED: transcriptional adapter ADA2-like isoform X2 [Cucumis melo][more]
XP_031744982.17.70e-7299.12transcriptional adapter ADA2a isoform X3 [Cucumis sativus][more]
XP_011658944.18.61e-7299.12transcriptional adapter ADA2a isoform X1 [Cucumis sativus] >KGN44365.2 hypotheti... [more]
BLAST of Cucsat.G16075 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U8501.13e-7498.25Transcriptional adapter ADA2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194... [more]
A0A0A0K8H26.67e-74100.00Transcriptional adapter OS=Cucumis sativus OX=3659 GN=Csa_7G179630 PE=4 SV=1[more]
A0A1S4DXR85.22e-7399.12Transcriptional adapter OS=Cucumis melo OX=3656 GN=LOC103490126 PE=4 SV=1[more]
A0A1S3BI163.25e-7198.25Transcriptional adapter OS=Cucumis melo OX=3656 GN=LOC103490126 PE=4 SV=1[more]
A0A6J1IMU71.64e-6792.92Transcriptional adapter OS=Cucurbita maxima OX=3661 GN=LOC111476993 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000433Zinc finger, ZZ-typeSMARTSM00291zz_5coord: 43..87
e-value: 1.2E-8
score: 44.8
IPR000433Zinc finger, ZZ-typePFAMPF00569ZZcoord: 47..87
e-value: 9.4E-11
score: 41.4
IPR000433Zinc finger, ZZ-typePROSITEPS01357ZF_ZZ_1coord: 49..76
IPR000433Zinc finger, ZZ-typePROSITEPS50135ZF_ZZ_2coord: 47..90
score: 10.78996
IPR043145Zinc finger, ZZ-type superfamilyGENE3D3.30.60.90coord: 41..97
e-value: 5.3E-12
score: 47.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availablePANTHERPTHR12374TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATEDcoord: 1..96
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 47..98
IPR034318Transcriptional adapter ADA2, plantsPANTHERPTHR12374:SF60TRANSCRIPTIONAL ADAPTER ADA2Bcoord: 1..96
IPR041983ADA2-like, zinc finger, ZZ-typeCDDcd02335ZZ_ADA2coord: 47..95
e-value: 1.80506E-25
score: 88.1184

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G16075.T1Cucsat.G16075.T1mRNA
Cucsat.G16075.T3Cucsat.G16075.T3mRNA
Cucsat.G16075.T2Cucsat.G16075.T2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006338 chromatin remodeling
biological_process GO:0035066 positive regulation of histone acetylation
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006357 regulation of transcription by RNA polymerase II
biological_process GO:0035065 regulation of histone acetylation
cellular_component GO:0005634 nucleus
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003713 transcription coactivator activity
molecular_function GO:0008270 zinc ion binding