Cucsat.G1607 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G1607
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Exopolygalacturonase-like
Location	ctg1000: 457510 .. 458658 (+)
RNA-Seq Expression	Cucsat.G1607
Synteny	Cucsat.G1607

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAGAAAAAAAAGAAAACAAGAACCAATCAGAGTAGAAAAAAGAAAAAAATGGGATTGATATCAAACGTTGTGGCATTATTGCCATTGTTGTTATTGTTGGTGTCTAATTCTAAAGCTCAACCTGCTGCAGCTCAACCTTCAGCTCAACCAGCTCAACCTGCAGGTGGTGCTGGTGGTGTTTTCGATATCACAAAATACGGTGCCAAACCTAATGCAGATATAACTGCGGTACGAATACTTGCATTAGTTGGACGAGAGATTTTAATTTATACAACATTTTAGTTATCAAACAAAATGATTTAATTTACAGGCATTGACAAGTGCATGGAAGGAGGCATGTGCATCGACCACTCCAAGTAAAGTTTTGATTCCAAAAGGAAGTTACGGATTAAGTCAATCCAACCTCAAAGGCCCTTGTAAAAGTCCTATCGAACTACAAATCGAAGGGACATTACAAGCTCCGGCCCATCCAGAAGGAGAAGGGCTACTCATTTTGGAAAATACCGATCTGTTGACAGTGTCAGGTACTGGAGTTTTGGATGGCCAAGGAAAAGCAGGTTGGGAAAAGAATGATTGCCATTTGAAGAAAGAATGCACCAAGCTTCCCATGGTAATTGCATGCTTTAATTACAACATGCTTATGTTATTAGCCTAACATCTTACGTATAATTTGACCACTACATATTTTTGCAATAATCAAACACGTTTTTAAATCAAGGGTTTTTTTTGTTTTGTTTAAAATGATCAGAATTTGAAGCTCAATTTCATCACAAATTCAATAGTAACGGGCATAACGTCATTGGATAGCAAGAATTTTCATATTAATCTTTTGGGTTGCAAGAACCTTACCTTTGACCACGTGACAATTACTGCACCGGGCAATAGTCCCAACACCGATGGAATTCACGTGAGTAGTTCAGAACAGATTAACATTCTCAATACCAATATCGCAACCGGAGATGATTGCATATCTGTGGGAGACTCCAACAAACAAGTAGCTATTAGCGATGTTACTTGCGGACCAGGACATGGAATTAGCATAGGAAGTTTGGGAAAATATACCAAGGAAAAAGAAGTGGTAGGAGTTACGGTGAAAAAATGCAAATTGACCGGTACTACAAACGGTGTTAGGATCAAAACAT

Coding sequence (CDS)

AAAAAAAAGAAAAAAAAGAAAACAAGAACCAATCAGAGTAGAAAAAAGAAAAAAATGGGATTGATATCAAACGTTGTGGCATTATTGCCATTGTTGTTATTGTTGGTGTCTAATTCTAAAGCTCAACCTGCTGCAGCTCAACCTTCAGCTCAACCAGCTCAACCTGCAGGTGGTGCTGGTGGTGTTTTCGATATCACAAAATACGGTGCCAAACCTAATGCAGATATAACTGCGGCATTGACAAGTGCATGGAAGGAGGCATGTGCATCGACCACTCCAAGTAAAGTTTTGATTCCAAAAGGAAGTTACGGATTAAGTCAATCCAACCTCAAAGGCCCTTGTAAAAGTCCTATCGAACTACAAATCGAAGGGACATTACAAGCTCCGGCCCATCCAGAAGGAGAAGGGCTACTCATTTTGGAAAATACCGATCTGTTGACAGTGTCAGGTACTGGAGTTTTGGATGGCCAAGGAAAAGCAGGTTGGGAAAAGAATGATTGCCATTTGAAGAAAGAATGCACCAAGCTTCCCATGAATTTGAAGCTCAATTTCATCACAAATTCAATAGTAACGGGCATAACGTCATTGGATAGCAAGAATTTTCATATTAATCTTTTGGGTTGCAAGAACCTTACCTTTGACCACGTGACAATTACTGCACCGGGCAATAGTCCCAACACCGATGGAATTCACGTGAGTAGTTCAGAACAGATTAACATTCTCAATACCAATATCGCAACCGGAGATGATTGCATATCTGTGGGAGACTCCAACAAACAAGTAGCTATTAGCGATGTTACTTGCGGACCAGGACATGGAATTAGCATAGGAAGTTTGGGAAAATATACCAAGGAAAAAGAAGTGGTAGGAGTTACGGTGAAAAAATGCAAATTGACCGGTACTACAAACGGTGTTAGGATCAAAACA

Protein sequence

KKKKKKKTRTNQSRKKKKMGLISNVVALLPLLLLLVSNSKAQPAAAQPSAQPAQPAGGAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKT

Homology

[Close]

BLAST of Cucsat.G1607 vs. ExPASy Swiss-Prot
Match: Q40312 (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 3.0e-80
Identity = 149/257 (57.98%), Postives = 185/257 (71.98%), Query Frame = 0


Query: 61  GVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIEL 120
           GV DI+K+G KPN+DI  ALTSAW EACASTT +K++IP G+Y L+   LKGPCK+PIEL
Sbjct: 23  GVLDISKFGGKPNSDIGQALTSAWNEACASTTAAKIVIPAGTYQLNGIELKGPCKAPIEL 82

Query: 121 QIEGTLQAPAHPE----GEGLLILENTDLLTVSGTGVLDGQGKAGWEK----NDCHLKKE 180
           Q++GT+QAPA P      E        D LT+SG GV DGQG   ++K    +    K  
Sbjct: 83  QVDGTIQAPADPSVIKGTEQWFKFLYMDHLTLSGKGVFDGQGATVYKKAAPASAWSGKNS 142

Query: 181 CTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHV 240
            +K+ MN   NF+ NSIV G+TS DSKNFH+ + GCKN+TFD  TITAPG+SPNTDGIH+
Sbjct: 143 NSKVFMNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHM 202

Query: 241 SSSEQINILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVT 300
             S  + ILNTNI TGDDC+S+GD +KQ+ +  V CGPGHG+S+GSLGK+T E+ V G+T
Sbjct: 203 GKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVGSLGKFTTEENVEGIT 262

Query: 301 VKKCKLTGTTNGVRIKT 310
           VK C LT T NGVRIKT
Sbjct: 263 VKNCTLTATDNGVRIKT 279

[Close]

BLAST of Cucsat.G1607 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.6e-78
Identity = 148/253 (58.50%), Postives = 184/253 (72.73%), Query Frame = 0


Query: 61  GVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIEL 120
           GVFDITKYGA  NADI+ AL +A+KEAC ST+PS ++IPKG++ ++Q  L+GPCKSP+EL
Sbjct: 25  GVFDITKYGANSNADISEALLNAFKEACQSTSPSTIVIPKGTFTMNQVKLEGPCKSPLEL 84

Query: 121 QIEGTLQAPAHPE----GEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKL 180
           QI+ TL+AP+ P     GE L +    D  T+SG G+LDGQ  A WE   C   K+C KL
Sbjct: 85  QIQATLKAPSDPSQLKVGEWLTV-NKLDQFTMSGGGILDGQAAAAWE---CKQSKKCNKL 144

Query: 181 PMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSE 240
           P NL  N +TNS +  IT+LDSK+FH+N+  CKNLTF    ++AP NSPNTDGIHVS S 
Sbjct: 145 PNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSS 204

Query: 241 QINILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKC 300
            +NI ++N +TGDDCISVGD  +Q+ I+ VTCGPGHGIS+GSLG    EK VVGV V+ C
Sbjct: 205 SVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNC 264

Query: 301 KLTGTTNGVRIKT 310
             T T NGVRIKT
Sbjct: 265 TFTNTDNGVRIKT 273

[Close]

BLAST of Cucsat.G1607 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.6e-76
Identity = 137/239 (57.32%), Postives = 179/239 (74.90%), Query Frame = 0


Query: 75  DITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHP-- 134
           D T ALT+AWKEACAS +PS +L+PKG++ +    L+GPCKS I LQ++GTL+APA P  
Sbjct: 1   DSTQALTTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSK 60

Query: 135 -EGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKE-CTKLPMNLKLNFITNSIV 194
            +G G + L   DLLT+ G GV DGQGK+ W +NDCH     C  L MNL+L  +TNSI+
Sbjct: 61  IKGLGWINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSIL 120

Query: 195 TGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDD 254
             +T+LDSKNFH+N++GCKNLTF+   I+A   S NTDGIH+  S+ +NI+NT I TGDD
Sbjct: 121 RDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDD 180

Query: 255 CISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKT 310
           CIS+GD +K + I+++TCGPGHGIS+GSLG+Y  E+ VVG+ VK C +TG+ NGVRIKT
Sbjct: 181 CISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKT 239

[Close]

BLAST of Cucsat.G1607 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 3.8e-75
Identity = 140/255 (54.90%), Postives = 180/255 (70.59%), Query Frame = 0


Query: 59  AGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCK-SP 118
           +G VF++  YGAK   DI+ A+  AWK ACAS  PS VLIPKG+Y + +  ++GPCK S 
Sbjct: 6   SGSVFNVNDYGAKGAGDISQAVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGPCKGSK 65

Query: 119 IELQIEGTLQAPAHP---EGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECT 178
           I  QI+G ++APA P   + +G +     D LTVSGTG LDGQG+  W KN+C     C 
Sbjct: 66  IGFQIDGVVKAPADPSKFKSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCK 125

Query: 179 KLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSS 238
              MNL+ +F+ +++V  ITSL+SK FHIN+L C+++TF HVT+TAPG S NTDGIHV  
Sbjct: 126 HAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGI 185

Query: 239 SEQINILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVK 298
           S+ + I NT IATGDDCIS+G  ++ V I+ V CGPGHGISIGSLG+Y  EKEV G+TVK
Sbjct: 186 SKGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVK 245

Query: 299 KCKLTGTTNGVRIKT 310
            C  +GT NGVR+KT
Sbjct: 246 GCTFSGTMNGVRVKT 260

[Close]

BLAST of Cucsat.G1607 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 6.6e-72
Identity = 138/291 (47.42%), Postives = 192/291 (65.98%), Query Frame = 0


Query: 25  VVALLPLLLLLVSNSKAQPAAAQPSAQPAQPAGGAGGVFD-ITKYGAKPN--ADITAALT 84
           V ++  LLLL +S SK QP A                 FD + K+GAK +   D++    
Sbjct: 8   VPSMFVLLLLFISASKVQPDA-----------------FDVVAKFGAKADGKTDLSKPFL 67

Query: 85  SAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHP---EGEGLL 144
            AWKEACAS TPS V+IPKG+Y LS+ NL+GPCK+PIE+ ++GT+QAPA P   +    +
Sbjct: 68  DAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWV 127

Query: 145 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 204
              + +   + G G+ DGQG   +EKN C  ++  +KLP+N++ +F+TN+++  ITS DS
Sbjct: 128 RFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDS 187

Query: 205 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 264
           K FHIN+  CKN+T + + I AP  SPNTDGIH+  SE +NI+ ++I TGDDCIS+GD  
Sbjct: 188 KLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGT 247

Query: 265 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKT 310
           K + I ++TCGPGHGISIGSLGK+  E+ V G+ +  C +T T+NG RIKT
Sbjct: 248 KNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKT 281

[Close]

BLAST of Cucsat.G1607 vs. NCBI nr
Match: KAE8647377.1 (hypothetical protein Csa_004085 [Cucumis sativus])

HSP 1 Score: 593 bits (1529), Expect = 4.23e-211
Identity = 306/309 (99.03%), Postives = 308/309 (99.68%), Query Frame = 0


Query: 1   KKKKKKKTRTNQSRKKKKMGLISNVVALLPLLLLLVSNSKAQPAAAQPSAQPAQPAGGAG 60
           KKKKKKKTRTNQSRKKKKMGLISN+VA+LPLLLLLVSNSKAQPAAAQPSAQPAQPAG AG
Sbjct: 14  KKKKKKKTRTNQSRKKKKMGLISNIVAILPLLLLLVSNSKAQPAAAQPSAQPAQPAGDAG 73

Query: 61  GVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIEL 120
           GVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIEL
Sbjct: 74  GVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIEL 133

Query: 121 QIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNL 180
           QIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNL
Sbjct: 134 QIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNL 193

Query: 181 KLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINI 240
           KLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINI
Sbjct: 194 KLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINI 253

Query: 241 LNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTG 300
           LNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTG
Sbjct: 254 LNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTG 313

Query: 301 TTNGVRIKT 309
           TTNGVRIKT
Sbjct: 314 TTNGVRIKT 322

[Close]

BLAST of Cucsat.G1607 vs. NCBI nr
Match: XP_031742831.1 (exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 591 bits (1523), Expect = 3.46e-210
Identity = 305/309 (98.71%), Postives = 307/309 (99.35%), Query Frame = 0


Query: 1   KKKKKKKTRTNQSRKKKKMGLISNVVALLPLLLLLVSNSKAQPAAAQPSAQPAQPAGGAG 60
           KKKKKKKTRTNQSRKKKKMGLISN+VA+LPLLLLLVSNSKAQPAAAQPSAQPAQPAG AG
Sbjct: 14  KKKKKKKTRTNQSRKKKKMGLISNIVAILPLLLLLVSNSKAQPAAAQPSAQPAQPAGDAG 73

Query: 61  GVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIEL 120
           GVFDITKYGAKPNADITAALTSAWK ACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIEL
Sbjct: 74  GVFDITKYGAKPNADITAALTSAWKAACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIEL 133

Query: 121 QIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNL 180
           QIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNL
Sbjct: 134 QIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNL 193

Query: 181 KLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINI 240
           KLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINI
Sbjct: 194 KLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINI 253

Query: 241 LNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTG 300
           LNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTG
Sbjct: 254 LNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTG 313

Query: 301 TTNGVRIKT 309
           TTNGVRIKT
Sbjct: 314 TTNGVRIKT 322

[Close]

BLAST of Cucsat.G1607 vs. NCBI nr
Match: XP_031742832.1 (exopolygalacturonase-like [Cucumis sativus] >XP_031742833.1 exopolygalacturonase-like [Cucumis sativus] >XP_031742834.1 exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 572 bits (1473), Expect = 4.63e-203
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 19  MGLISNVVALLPLLLLLVSNSKAQPAAAQPSAQPAQPAGGAGGVFDITKYGAKPNADITA 78
           MGLISNVVALLPLLLLLVSNSKAQPAAAQPSAQPAQPAGGAGGVFDITKYGAKPNADITA
Sbjct: 1   MGLISNVVALLPLLLLLVSNSKAQPAAAQPSAQPAQPAGGAGGVFDITKYGAKPNADITA 60

Query: 79  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 138
           ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL
Sbjct: 61  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 120

Query: 139 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 198
           ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS
Sbjct: 121 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 180

Query: 199 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 258
           KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN
Sbjct: 181 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 240

Query: 259 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKT 309
           KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKT
Sbjct: 241 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKT 291

[Close]

BLAST of Cucsat.G1607 vs. NCBI nr
Match: XP_011657634.1 (exopolygalacturonase [Cucumis sativus])

HSP 1 Score: 570 bits (1470), Expect = 1.33e-202
Identity = 289/291 (99.31%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 19  MGLISNVVALLPLLLLLVSNSKAQPAAAQPSAQPAQPAGGAGGVFDITKYGAKPNADITA 78
           MGLISN+VA+LPLLLLLVSNSKAQPAAAQPSAQPAQPAGGAGGVFDITKYGAKPNADITA
Sbjct: 1   MGLISNIVAILPLLLLLVSNSKAQPAAAQPSAQPAQPAGGAGGVFDITKYGAKPNADITA 60

Query: 79  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 138
           ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL
Sbjct: 61  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 120

Query: 139 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 198
           ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS
Sbjct: 121 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 180

Query: 199 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 258
           KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN
Sbjct: 181 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 240

Query: 259 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKT 309
           KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKT
Sbjct: 241 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKT 291

[Close]

BLAST of Cucsat.G1607 vs. NCBI nr
Match: XP_031742970.1 (exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 569 bits (1467), Expect = 3.79e-202
Identity = 289/291 (99.31%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 19  MGLISNVVALLPLLLLLVSNSKAQPAAAQPSAQPAQPAGGAGGVFDITKYGAKPNADITA 78
           MGLISNVVA+LPLLLLLVSNSKAQPAAAQPSA+PAQPAGGAGGVFDITKYGAKPNADITA
Sbjct: 1   MGLISNVVAILPLLLLLVSNSKAQPAAAQPSAKPAQPAGGAGGVFDITKYGAKPNADITA 60

Query: 79  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 138
           ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL
Sbjct: 61  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 120

Query: 139 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 198
           ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS
Sbjct: 121 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 180

Query: 199 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 258
           KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN
Sbjct: 181 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 240

Query: 259 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKT 309
           KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKT
Sbjct: 241 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKT 291

[Close]

BLAST of Cucsat.G1607 vs. ExPASy TrEMBL
Match: A0A5A7TRZ0 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00600 PE=3 SV=1)

HSP 1 Score: 495 bits (1274), Expect = 2.51e-173
Identity = 253/291 (86.94%), Postives = 263/291 (90.38%), Query Frame = 0


Query: 19  MGLISNVVALLPLLLLLVSNSKAQPAAAQPSAQPAQPAGGAGGVFDITKYGAKPNADITA 78
           MGLISN V LLP+LLLLVSNSKAQ                +GGVFDITKYGAKPNAD+TA
Sbjct: 1   MGLISNFVTLLPVLLLLVSNSKAQ---------------SSGGVFDITKYGAKPNADVTA 60

Query: 79  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 138
           AL SAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKS IELQIEGTLQAPA P+G+GLL
Sbjct: 61  ALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGLL 120

Query: 139 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 198
           +LE  D LTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNF+TNSIV  ITSLDS
Sbjct: 121 LLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLDS 180

Query: 199 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 258
           KN+HINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGD+N
Sbjct: 181 KNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTN 240

Query: 259 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKT 309
           KQV ISDVTCGPGHGISIGSLGKY+KEKEVVGVTVKKCKLT TTNGVRIKT
Sbjct: 241 KQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKT 276

[Close]

BLAST of Cucsat.G1607 vs. ExPASy TrEMBL
Match: A0A5D3DYI3 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00050 PE=3 SV=1)

HSP 1 Score: 494 bits (1272), Expect = 5.05e-173
Identity = 253/291 (86.94%), Postives = 263/291 (90.38%), Query Frame = 0


Query: 19  MGLISNVVALLPLLLLLVSNSKAQPAAAQPSAQPAQPAGGAGGVFDITKYGAKPNADITA 78
           MGLISN VALLP+LLLLVSNSKAQ                +G VFDITKYGAKPNAD+TA
Sbjct: 1   MGLISNFVALLPVLLLLVSNSKAQ---------------SSGSVFDITKYGAKPNADVTA 60

Query: 79  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 138
           AL SAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKS IELQIEGTLQAPA P+G+GLL
Sbjct: 61  ALVSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGLL 120

Query: 139 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 198
           +LE  D LTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNF+TNSIV  ITSLDS
Sbjct: 121 LLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLDS 180

Query: 199 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 258
           KN+HINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGD+N
Sbjct: 181 KNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTN 240

Query: 259 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKT 309
           KQV ISDVTCGPGHGISIGSLGKY+KEKEVVGVTVKKCKLT TTNGVRIKT
Sbjct: 241 KQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKT 276

[Close]

BLAST of Cucsat.G1607 vs. ExPASy TrEMBL
Match: A0A5A7TR51 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G00990 PE=3 SV=1)

HSP 1 Score: 493 bits (1270), Expect = 1.02e-172
Identity = 253/291 (86.94%), Postives = 263/291 (90.38%), Query Frame = 0


Query: 19  MGLISNVVALLPLLLLLVSNSKAQPAAAQPSAQPAQPAGGAGGVFDITKYGAKPNADITA 78
           MGLISN VALL +LLLLVSNSKAQ                +GGVFDITKYGAKPNAD+TA
Sbjct: 1   MGLISNFVALLSVLLLLVSNSKAQ---------------SSGGVFDITKYGAKPNADVTA 60

Query: 79  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 138
           AL SAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKS IELQIEGTLQAPA P+G+GLL
Sbjct: 61  ALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGLL 120

Query: 139 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 198
           +LE  D LTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNF+TNSIV  ITSLDS
Sbjct: 121 LLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLDS 180

Query: 199 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 258
           KN+HINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGD+N
Sbjct: 181 KNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTN 240

Query: 259 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKT 309
           KQV ISDVTCGPGHGISIGSLGKY+KEKEVVGVTVKKCKLT TTNGVRIKT
Sbjct: 241 KQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKT 276

[Close]

BLAST of Cucsat.G1607 vs. ExPASy TrEMBL
Match: A0A5D3BWP4 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00550 PE=3 SV=1)

HSP 1 Score: 484 bits (1245), Expect = 6.45e-169
Identity = 249/291 (85.57%), Postives = 260/291 (89.35%), Query Frame = 0


Query: 19  MGLISNVVALLPLLLLLVSNSKAQPAAAQPSAQPAQPAGGAGGVFDITKYGAKPNADITA 78
           MGLISN VALL +LLLLVSN KAQ                +G V DITK+GAKPNAD+TA
Sbjct: 1   MGLISNFVALLHVLLLLVSNCKAQ---------------SSGVVIDITKFGAKPNADVTA 60

Query: 79  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 138
           AL SAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKS IELQIEGTLQAPA P+G+GLL
Sbjct: 61  ALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGLL 120

Query: 139 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 198
           +LE  D LTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNF+TNSIV  ITSLDS
Sbjct: 121 LLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLDS 180

Query: 199 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 258
           KN+HINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGD+N
Sbjct: 181 KNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTN 240

Query: 259 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKT 309
           KQV ISDVTCGPGHGISIGSLGKY+KEKEVVGVTVKKCKLT TTNGVRIKT
Sbjct: 241 KQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKT 276

[Close]

BLAST of Cucsat.G1607 vs. ExPASy TrEMBL
Match: A0A5A7ULW5 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G006240 PE=3 SV=1)

HSP 1 Score: 466 bits (1199), Expect = 6.35e-162
Identity = 240/291 (82.47%), Postives = 253/291 (86.94%), Query Frame = 0


Query: 19  MGLISNVVALLPLLLLLVSNSKAQPAAAQPSAQPAQPAGGAGGVFDITKYGAKPNADITA 78
           MGL SN VALL L LLLVSNSKAQ                +G VFD+T +GAKP+ADIT 
Sbjct: 1   MGLRSNFVALLLLFLLLVSNSKAQ---------------SSGAVFDVTSFGAKPDADITG 60

Query: 79  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 138
           AL SAWKE CAS TPSKVLIPKGSYGLSQSNLKGPCKS IELQIEGTLQAP+ P+G+GLL
Sbjct: 61  ALVSAWKEGCASITPSKVLIPKGSYGLSQSNLKGPCKSSIELQIEGTLQAPSDPKGDGLL 120

Query: 139 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 198
           ILE  D LTVSG GVLDGQGK GWEKNDCHLKK CTKLPMNLKLNFITNSIV  ITSLDS
Sbjct: 121 ILEYVDRLTVSGMGVLDGQGKEGWEKNDCHLKKICTKLPMNLKLNFITNSIVKDITSLDS 180

Query: 199 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 258
           KN+HINLLGCKNLTFDHVTITAPG+SPNTDGIHVSSSE+INILNTNIATGDDCISVGD+N
Sbjct: 181 KNYHINLLGCKNLTFDHVTITAPGDSPNTDGIHVSSSEEINILNTNIATGDDCISVGDTN 240

Query: 259 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKT 309
           KQ+ ISDVTCGPGHGISIGSLGKY+KEKEVVGVTVKKCKLT TTNGVRIKT
Sbjct: 241 KQIVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTSTTNGVRIKT 276

[Close]

BLAST of Cucsat.G1607 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 259.2 bits (661), Expect = 4.1e-69
Identity = 121/248 (48.79%), Postives = 171/248 (68.95%), Query Frame = 0


Query: 64  DITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIE 123
           ++   G  P +DIT AL  A+  AC + T SKV+I KG + L +  + GPCK+P+E+ ++
Sbjct: 24  EVFNVGGSPGSDITQALLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCKAPVEINLQ 83

Query: 124 GTLQA--PAHPEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLK 183
           GTL+A   A    E  ++    +   ++G G+ DG+G A W  N+CH   EC KLP++++
Sbjct: 84  GTLKADGKAIQGKERWVVFLRINGFKLNGGGIFDGEGNAAWRVNNCHKTFECKKLPISIR 143

Query: 184 LNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINIL 243
            +F+ N+ +  I+S+D+KNFHIN+LG KN+TFD+V + AP  SPNTDGIH+  SE + IL
Sbjct: 144 FDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKIL 203

Query: 244 NTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGT 303
           N+ IATGDDCISVGD  K + + +V CGPGHGIS+GSLG+Y  E++V G+TV  C L GT
Sbjct: 204 NSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQGT 263

Query: 304 TNGVRIKT 310
            NG+RIKT
Sbjct: 264 DNGLRIKT 271

[Close]

BLAST of Cucsat.G1607 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 254.2 bits (648), Expect = 1.3e-67
Identity = 121/248 (48.79%), Postives = 175/248 (70.56%), Query Frame = 0


Query: 64  DITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIE 123
           ++   G+   +DIT AL  A+  AC S++PSKV+IPKG + L +  ++GPCK+PIE+ ++
Sbjct: 23  EVFTIGSSSGSDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQ 82

Query: 124 GTLQAPAHP-EG-EGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLK 183
           GT++A  +  +G E  ++  N D   ++G G  DG+G A W  N+CH   EC KLP++++
Sbjct: 83  GTVKADGNAIQGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIR 142

Query: 184 LNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINIL 243
            +FI NS +  I+S+D+KNFHIN+LG KN+T +++ I AP +SPNTDGIH+  S+ + IL
Sbjct: 143 FDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKIL 202

Query: 244 NTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGT 303
           N+ I+TGDDCISVGD  K + +  VTCGPGHGIS+GSLG+Y  E++V G+ V  C L  T
Sbjct: 203 NSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQET 262

Query: 304 TNGVRIKT 310
            NG+RIKT
Sbjct: 263 DNGLRIKT 270

[Close]

BLAST of Cucsat.G1607 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 250.4 bits (638), Expect = 1.9e-66
Identity = 121/246 (49.19%), Postives = 167/246 (67.89%), Query Frame = 0


Query: 65  ITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEG 124
           I    + P +DIT AL  A+ EAC   T S V+IPKG Y L +  + GPCK+PI + + G
Sbjct: 25  IFNINSPPGSDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLG 84

Query: 125 TLQAPAHPEG-EGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLN 184
           T++A  +  G E  +   N +   ++G GV DG+G A W  N+CH    C KLP++++ +
Sbjct: 85  TVKADGNANGKEKWVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFD 144

Query: 185 FITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNT 244
           F+T++ + GITSLD+K+FHIN++G KN+TF+ V I AP  SPNTDGIHV  S+ I I+N+
Sbjct: 145 FVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINS 204

Query: 245 NIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTN 304
            I+TGDDC+SVGD  K + +  VTCGPGHGISIGSLG+Y+ E+ V G+ +  C L  T N
Sbjct: 205 FISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDN 264

Query: 305 GVRIKT 310
           G+RIKT
Sbjct: 265 GLRIKT 270

[Close]

BLAST of Cucsat.G1607 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 248.8 bits (634), Expect = 5.6e-66
Identity = 117/255 (45.88%), Postives = 171/255 (67.06%), Query Frame = 0


Query: 57  GGAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKS 116
           G +    ++ +  + P +DIT AL  A+  AC S TP KV+IPKG + L +  + GPCKS
Sbjct: 17  GFSANAHEVLRLTSSPGSDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKS 76

Query: 117 PIELQIEGTLQAPAHP--EGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECT 176
           P+E+ + GT+ A  +     E  ++ +  D   ++G G  DG+G A W  N+CH   EC 
Sbjct: 77  PVEITLLGTVLADGNSIHGKEKWVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECK 136

Query: 177 KLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSS 236
           KLP++++ +F+TN+ +  I+S+D+KNFHIN++G KN+TFD+V I AP  SPNTDGIH+  
Sbjct: 137 KLPISIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGR 196

Query: 237 SEQINILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVK 296
           S  ++I+N+ I+TGDDC+SVGD    + + +V CGPGHGIS+GSLG+Y  E++V G+ V 
Sbjct: 197 SVGVSIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVI 256

Query: 297 KCKLTGTTNGVRIKT 310
            C L  T NG+RIKT
Sbjct: 257 NCTLQETDNGLRIKT 271

[Close]

BLAST of Cucsat.G1607 vs. TAIR 10
Match: AT3G07850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 229.9 bits (585), Expect = 2.7e-60
Identity = 125/296 (42.23%), Postives = 171/296 (57.77%), Query Frame = 0


Query: 35  LVSNSKAQPAAAQPSAQPAQPA-GGAGGVFDITKYGAKPNA---------------DITA 94
           +V  +K    A + +A+ A  A GGA         GAKP A               D +A
Sbjct: 28  VVDKAKNAATAVEDTAKNAATAVGGAAASVGAKVSGAKPGAAVDVKASGAKGDSKTDDSA 87

Query: 95  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPE----G 154
           A  +AWKEACA+   S + +PKG Y +     KGPCK P+ L++ G  +APA  +     
Sbjct: 88  AFAAAWKEACAA--GSTITVPKGEYMVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPH 147

Query: 155 EGLLILENTDLLTVSGT-GVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGI 214
            G +  EN    T++G   + DGQG   W+ NDC    +C  LP+N++   +TNS +  I
Sbjct: 148 AGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSI 207

Query: 215 TSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCIS 274
           TS +SK FH+N+L CKN+T   + I AP  S NTDGIH+  S  +N++   I TGDDC+S
Sbjct: 208 TSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVS 267

Query: 275 VGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKT 310
           +GD  + + + +V CGPGHGISIGSLG+Y  E+ V GVTV+KC +  T NGVRIKT
Sbjct: 268 IGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKT 321

The following BLAST results are available for this feature:

BLAST of Cucsat.G1607 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40312	3.0e-80	57.98	Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1	[more]
Q05967	1.6e-78	58.50	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]
P24548	2.6e-76	57.32	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
Q6H9K0	3.8e-75	54.90	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
Q39766	6.6e-72	47.42	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]

BLAST of Cucsat.G1607 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647377.1	4.23e-211	99.03	hypothetical protein Csa_004085 [Cucumis sativus]	[more]
XP_031742831.1	3.46e-210	98.71	exopolygalacturonase-like [Cucumis sativus]	[more]
XP_031742832.1	4.63e-203	100.00	exopolygalacturonase-like [Cucumis sativus] >XP_031742833.1 exopolygalacturonase...	[more]
XP_011657634.1	1.33e-202	99.31	exopolygalacturonase [Cucumis sativus]	[more]
XP_031742970.1	3.79e-202	99.31	exopolygalacturonase-like [Cucumis sativus]	[more]

BLAST of Cucsat.G1607 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TRZ0	2.51e-173	86.94	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5D3DYI3	5.05e-173	86.94	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7TR51	1.02e-172	86.94	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5D3BWP4	6.45e-169	85.57	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7ULW5	6.35e-162	82.47	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of Cucsat.G1607 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07840.1	4.1e-69	48.79	Pectin lyase-like superfamily protein	[more]
AT3G07820.1	1.3e-67	48.79	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	1.9e-66	49.19	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	5.6e-66	45.88	Pectin lyase-like superfamily protein	[more]
AT3G07850.1	2.7e-60	42.23	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 288..309 e-value: 12.0 score: 14.8 coord: 235..256 e-value: 2500.0 score: 4.4 coord: 208..234 e-value: 3.5 score: 16.6
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 48..309 e-value: 2.4E-74 score: 252.8
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 88..309 e-value: 1.8E-69 score: 234.3
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 265..278
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 34..309
None	No IPR available	PANTHER	PTHR31375:SF248	POLYGALACTURONASE	coord: 34..309
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 59..309

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G1607.T1	Cucsat.G1607.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity