Cucsat.G16025 (gene) Cucumber (B10) v3

Overview
NameCucsat.G16025
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description50S ribosomal protein L25
Locationctg2178: 632035 .. 634750 (+)
RNA-Seq ExpressionCucsat.G16025
SyntenyCucsat.G16025
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGCCCAATTACCTCAAAGTACAATTTGCCCAAACTTCTTTAGGTCCAAAGGCCCATACTCAAAACCCCCAAACTTCACGGTGCATAAACCCTCACAGCACATAGAGCTCCGCTTAGCTCCTCGCCATTCCGGCTGCCATTGTCCAGACTTCCGACCGATCATGGCCAACTGGTGGCGCTCCGCCAGAACGAACCTCAGGTTGGCGGCATTTTCAGGAACTAAATCGGAATCGTTTCCATTTTCATCATTTCGAGCTGCTTACCATACGATCCAAGCAATTCCTAGAGAGTGCAGCGGCCGCAAAATTTCGAGCAAAGATAGAGCTCAAGGAAGAATACCCGCTGTCGTTTTCAGTCAACAAATCCTTGAGAAAAACTCAGTCCACGGATCGCCGTCGCGAAAGCATCTGCTCACTACAGAGCGAAAGCAAATCCACTCCATTCTCAAATCCGTTGAGCTTCCTTTCTTTTGCTCCACTAGGTTCAAACTTCAGATTCGTGCTGGTTCCGGGTCTTCCGTACTTCTTGAATCAGGATCCATCCTTCCAATTAAAGTAAGCCATTCACTTCTCTCTACCTGTTTGTTTATGTTTAATTCAACTTGATTTTTTCCTTTTCATTTCTTGTTATGGAGTAACTCCTTGAGTTTTTTTCAGATTCATAGGAATGAAGAGACAGGGAAGATCTTCAATATTGTGTTTGTATGGGCTGATGAAGGCTCGGAGTTGAAGGTAGATGTGCCAATTGTTTTTAAAGGCGAAGAGGCTTGCCCTGGTCTTCAGAAAGGTAACCAATGAAGAAATGCTTATTTAATTCCCTAGCTGACTTAGTCGTGTTCTTGATTTTGTTAATATTGAATTAATTTGAGCTATTGCAAGAAATTGGGAAATTAGTTTATTGAATCCAGAAAATATGTTGAGCCTTTTTTGCACTTCTATAATTGCAAAGATGACACCGAGGTTTTGTCTTTCGAGAAGCAAAAAATTTGGTCCTATGATTCTTACTTTTCCTCACTATATGAAATGTGCACAACCCACTTTGGAAAAAATACACCTAGAAACTGTGCAATGTTTAATCATCTTTGATCTTTCTTTCCTCCTTGATTATTCGAAGATTTTCTGTTTTCTTTCTGTCTAAGGACCCCAAAGAAAGTAGCTTTAAACACTTATTGATCCACTGAACTTTAGGAGTGACATAAAAGTGTTGTGTTTAGCTATTAAATTATCTACTTCAGCAATCCTGAAGACTTAAGACACTCTCCGAGACACTGAACATTGGGGGAAAATAGAGAATACAAGGGGGTGTACGACTACTAAGTGACTTTACCCAAGCTTTCCATAACTAGCTGATCTTACTTGATTTGTGTCTGTCCCACGAAAAGTAGAATGTTCTAGAATAATCAGTATAATGGTATGGTTAACCTTTATGAAACTTTTCTATTGATGTGCAGAGCAGCTAAAGGAGGAAATTTCTTACATATTTTTAGCTGAAAATTTCTTTCATTCTTAACGTGAAGTCTTTTTGGACCATTTTTGTGAGCCATGTTAGAACCTTTTAGTTATTAGTGATTAGCAAATCTTGTGATGTATGGATGAAGTTGTTCCTTTGGGGAATATATGACATTTCCGAAGTTCAAACTATGAACTTTGGTCAAACTTATAGGGGCATGACCTTGATAAAGGGCTAATAAATCATGAGTTTAGTCCATGATGGTGGAACCTACCTAGGATTTAATATTCTATGAGTTATTTTGACACTCAAATGTTGTAGGTTCAGGGGATCTTGGAAAAAAACCATGGTCAAACATAGGTAGATGAACCACCATTAGCTTCTTCACCTTGTTCTATAATGGTACCTAGTTCCTGCAAGGCTTTCTCAAATTTGCTGCAACAGTTCGGTTTATGTTTATGACATTTAAACATGGTAGATGATAAAAGATTTTGTTCTCTATCTGATCGTAGTTAGGATGATAAAGAATTGGAACTTAAAAGTCTACAATCTTGCAAAACTTGTATGGTGATCCATGTTTTCCTTTAGTAGTTTTCTTATCTGAATCTTTGTCATCCTGTCAAATGTAGTTTTGAAATCTTACTTTTAATTGTGGAAAACAGGAGGTCAACTGAACAAGATAAGAACTAGCCTGAAATATCTTTGCCCGGCCGAACACATTCCCTCAAAGATTGAGGTGGATGTAAGTAATCTGGACATTGGGGATAGAATTTTCATTCGCGATGTAGACGTCCATTCTTCTATGAAGCTACTTAGCAAGAACGAAGTAATGCCTATATGTAAAATAGTCACAATCAAGTCTGAAACTGCAAACACAGAAACTTCAGCAACTTCAGAAACATCAGAAACTTCATGACGGCAGATTCGTTGGAAACATATTTGTGTTTAGAAGCTTTTGGTCTACTAAACAACTGATGATTGAAGAGACCAAAGACTAACATCTACTTGGCATCAAGTTCGTCCTCTATTTGGAAGATGTTATGTGTTTAAGATCTAAATTTGTCATGTTCTTTGTATAAATTTGGAACTGTTTTTCTCTATTTCGATTCCTACCGACTTTTGATGCACTAGCTGAGAATTTTGATAAAGCTCAGGTTCACATGAGATCTCTTTCTTGCTGGATTAAAAGTATCGACAGAAGATAAATGCTTTTTTAAAAGAGATTATTGCCTCAATCATTATTGTTGGAAGAATAAAGAACAATGATGCCCCAGAGTATATTTTAGTTCAATCATCATCCACTTTAGGTATGGTACTTATT

Coding sequence (CDS)

GCCCAATTACCTCAAAGTACAATTTGCCCAAACTTCTTTAGGTCCAAAGGCCCATACTCAAAACCCCCAAACTTCACGGTGCATAAACCCTCACAGCACATAGAGCTCCGCTTAGCTCCTCGCCATTCCGGCTGCCATTGTCCAGACTTCCGACCGATCATGGCCAACTGGTGGCGCTCCGCCAGAACGAACCTCAGGTTGGCGGCATTTTCAGGAACTAAATCGGAATCGTTTCCATTTTCATCATTTCGAGCTGCTTACCATACGATCCAAGCAATTCCTAGAGAGTGCAGCGGCCGCAAAATTTCGAGCAAAGATAGAGCTCAAGGAAGAATACCCGCTGTCGTTTTCAGTCAACAAATCCTTGAGAAAAACTCAGTCCACGGATCGCCGTCGCGAAAGCATCTGCTCACTACAGAGCGAAAGCAAATCCACTCCATTCTCAAATCCGTTGAGCTTCCTTTCTTTTGCTCCACTAGGTTCAAACTTCAGATTCGTGCTGGTTCCGGGTCTTCCGTACTTCTTGAATCAGGATCCATCCTTCCAATTAAAATTCATAGGAATGAAGAGACAGGGAAGATCTTCAATATTGTGTTTGTATGGGCTGATGAAGGCTCGGAGTTGAAGGTAGATGTGCCAATTGTTTTTAAAGGCGAAGAGGCTTGCCCTGGTCTTCAGAAAGGAGGTCAACTGAACAAGATAAGAACTAGCCTGAAATATCTTTGCCCGGCCGAACACATTCCCTCAAAGATTGAGGTGGATGTAAGTAATCTGGACATTGGGGATAGAATTTTCATTCGCGATGTAGACGTCCATTCTTCTATGAAGCTACTTAGCAAGAACGAAGTAATGCCTATATGTAAAATAGTCACAATCAAGTCTGAAACTGCAAACACAGAAACTTCAGCAACTTCAGAAACATCAGAAACTTCATGA

Protein sequence

AQLPQSTICPNFFRSKGPYSKPPNFTVHKPSQHIELRLAPRHSGCHCPDFRPIMANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIPAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSVLLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNKIRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTIKSETANTETSATSETSETS
Homology
[Close]
BLAST of Cucsat.G16025 vs. NCBI nr
Match: XP_004148437.1 (uncharacterized protein LOC101208580 [Cucumis sativus] >KGN62070.1 hypothetical protein Csa_006311 [Cucumis sativus])

HSP 1 Score: 263 bits (671), Expect = 1.22e-85
Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 39  MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 98
           MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP
Sbjct: 1   MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60

Query: 99  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 158
           AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV
Sbjct: 61  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 120

Query: 159 LLESGSILPIKV 170
           LLESGSILPIK+
Sbjct: 121 LLESGSILPIKI 132

[Close]
BLAST of Cucsat.G16025 vs. NCBI nr
Match: KAA0045879.1 (50S ribosomal protein L25 [Cucumis melo var. makuwa] >TYK13708.1 50S ribosomal protein L25 [Cucumis melo var. makuwa])

HSP 1 Score: 246 bits (627), Expect = 4.04e-80
Identity = 122/132 (92.42%), Postives = 126/132 (95.45%), Query Frame = 0 

Query: 39  MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 98
           MA WWRSA TNLR A  SGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP
Sbjct: 1   MAKWWRSAGTNLRWAVLSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60

Query: 99  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 158
           AVVFSQQ+LEKN VHGSPSRKHLLTTERKQIHSILKSV+LPFFCSTRF+LQIRAGSGSSV
Sbjct: 61  AVVFSQQLLEKNPVHGSPSRKHLLTTERKQIHSILKSVKLPFFCSTRFQLQIRAGSGSSV 120

Query: 159 LLESGSILPIKV 170
           LLESGSILPIK+
Sbjct: 121 LLESGSILPIKI 132

[Close]
BLAST of Cucsat.G16025 vs. NCBI nr
Match: XP_008457885.1 (PREDICTED: 50S ribosomal protein L25 [Cucumis melo])

HSP 1 Score: 246 bits (627), Expect = 7.14e-79
Identity = 122/132 (92.42%), Postives = 126/132 (95.45%), Query Frame = 0 

Query: 39  MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 98
           MA WWRSA TNLR A  SGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP
Sbjct: 1   MAKWWRSAGTNLRWAVLSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60

Query: 99  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 158
           AVVFSQQ+LEKN VHGSPSRKHLLTTERKQIHSILKSV+LPFFCSTRF+LQIRAGSGSSV
Sbjct: 61  AVVFSQQLLEKNPVHGSPSRKHLLTTERKQIHSILKSVKLPFFCSTRFQLQIRAGSGSSV 120

Query: 159 LLESGSILPIKV 170
           LLESGSILPIK+
Sbjct: 121 LLESGSILPIKI 132

[Close]
BLAST of Cucsat.G16025 vs. NCBI nr
Match: XP_022971722.1 (uncharacterized protein LOC111470391 [Cucurbita maxima])

HSP 1 Score: 226 bits (575), Expect = 3.90e-71
Identity = 114/133 (85.71%), Postives = 120/133 (90.23%), Query Frame = 0 

Query: 39  MANWWRSARTNLRLAAFSGTKSESFPFSSFRAA-YHTIQAIPRECSGRKISSKDRAQGRI 98
           MA WWRS  TNLRL A S  +SE FPFSS RAA YHTIQAIPRECSG +ISS+DRAQGRI
Sbjct: 1   MAKWWRSTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISSRDRAQGRI 60

Query: 99  PAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSS 158
           PAVVFSQQ+LEKNS+HGSPSRKHLLT ERKQIHSILKSVELPFFCSTR +LQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 159 VLLESGSILPIKV 170
           VLLESGSILPIKV
Sbjct: 121 VLLESGSILPIKV 133

[Close]
BLAST of Cucsat.G16025 vs. NCBI nr
Match: XP_022928099.1 (uncharacterized protein LOC111434985 [Cucurbita moschata] >KAG6571398.1 hypothetical protein SDJN03_30313, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 224 bits (572), Expect = 1.11e-70
Identity = 113/133 (84.96%), Postives = 120/133 (90.23%), Query Frame = 0 

Query: 39  MANWWRSARTNLRLAAFSGTKSESFPFSSFRAA-YHTIQAIPRECSGRKISSKDRAQGRI 98
           MA WWRS  TNLRL A S  +SE FPFSS RAA YHTIQAIPRECSG +IS++DRAQGRI
Sbjct: 1   MAKWWRSTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60

Query: 99  PAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSS 158
           PAVVFSQQ+LEKNS+HGSPSRKHLLT ERKQIHSILKSVELPFFCSTR +LQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 159 VLLESGSILPIKV 170
           VLLESGSILPIKV
Sbjct: 121 VLLESGSILPIKV 133

[Close]
BLAST of Cucsat.G16025 vs. ExPASy TrEMBL
Match: A0A0A0LJM8 (Ribosomal_TL5_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G295950 PE=4 SV=1)

HSP 1 Score: 263 bits (671), Expect = 5.92e-86
Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 39  MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 98
           MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP
Sbjct: 1   MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60

Query: 99  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 158
           AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV
Sbjct: 61  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 120

Query: 159 LLESGSILPIKV 170
           LLESGSILPIK+
Sbjct: 121 LLESGSILPIKI 132

[Close]
BLAST of Cucsat.G16025 vs. ExPASy TrEMBL
Match: A0A5A7TX73 (50S ribosomal protein L25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002320 PE=4 SV=1)

HSP 1 Score: 246 bits (627), Expect = 1.96e-80
Identity = 122/132 (92.42%), Postives = 126/132 (95.45%), Query Frame = 0 

Query: 39  MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 98
           MA WWRSA TNLR A  SGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP
Sbjct: 1   MAKWWRSAGTNLRWAVLSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60

Query: 99  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 158
           AVVFSQQ+LEKN VHGSPSRKHLLTTERKQIHSILKSV+LPFFCSTRF+LQIRAGSGSSV
Sbjct: 61  AVVFSQQLLEKNPVHGSPSRKHLLTTERKQIHSILKSVKLPFFCSTRFQLQIRAGSGSSV 120

Query: 159 LLESGSILPIKV 170
           LLESGSILPIK+
Sbjct: 121 LLESGSILPIKI 132

[Close]
BLAST of Cucsat.G16025 vs. ExPASy TrEMBL
Match: A0A1S3C6P2 (50S ribosomal protein L25 OS=Cucumis melo OX=3656 GN=LOC103497462 PE=4 SV=1)

HSP 1 Score: 246 bits (627), Expect = 3.46e-79
Identity = 122/132 (92.42%), Postives = 126/132 (95.45%), Query Frame = 0 

Query: 39  MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 98
           MA WWRSA TNLR A  SGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP
Sbjct: 1   MAKWWRSAGTNLRWAVLSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60

Query: 99  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 158
           AVVFSQQ+LEKN VHGSPSRKHLLTTERKQIHSILKSV+LPFFCSTRF+LQIRAGSGSSV
Sbjct: 61  AVVFSQQLLEKNPVHGSPSRKHLLTTERKQIHSILKSVKLPFFCSTRFQLQIRAGSGSSV 120

Query: 159 LLESGSILPIKV 170
           LLESGSILPIK+
Sbjct: 121 LLESGSILPIKI 132

[Close]
BLAST of Cucsat.G16025 vs. ExPASy TrEMBL
Match: A0A6J1I2R7 (uncharacterized protein LOC111470391 OS=Cucurbita maxima OX=3661 GN=LOC111470391 PE=4 SV=1)

HSP 1 Score: 226 bits (575), Expect = 1.89e-71
Identity = 114/133 (85.71%), Postives = 120/133 (90.23%), Query Frame = 0 

Query: 39  MANWWRSARTNLRLAAFSGTKSESFPFSSFRAA-YHTIQAIPRECSGRKISSKDRAQGRI 98
           MA WWRS  TNLRL A S  +SE FPFSS RAA YHTIQAIPRECSG +ISS+DRAQGRI
Sbjct: 1   MAKWWRSTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISSRDRAQGRI 60

Query: 99  PAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSS 158
           PAVVFSQQ+LEKNS+HGSPSRKHLLT ERKQIHSILKSVELPFFCSTR +LQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 159 VLLESGSILPIKV 170
           VLLESGSILPIKV
Sbjct: 121 VLLESGSILPIKV 133

[Close]
BLAST of Cucsat.G16025 vs. ExPASy TrEMBL
Match: A0A6J1EJW5 (uncharacterized protein LOC111434985 OS=Cucurbita moschata OX=3662 GN=LOC111434985 PE=4 SV=1)

HSP 1 Score: 224 bits (572), Expect = 5.38e-71
Identity = 113/133 (84.96%), Postives = 120/133 (90.23%), Query Frame = 0 

Query: 39  MANWWRSARTNLRLAAFSGTKSESFPFSSFRAA-YHTIQAIPRECSGRKISSKDRAQGRI 98
           MA WWRS  TNLRL A S  +SE FPFSS RAA YHTIQAIPRECSG +IS++DRAQGRI
Sbjct: 1   MAKWWRSTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60

Query: 99  PAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSS 158
           PAVVFSQQ+LEKNS+HGSPSRKHLLT ERKQIHSILKSVELPFFCSTR +LQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 159 VLLESGSILPIKV 170
           VLLESGSILPIKV
Sbjct: 121 VLLESGSILPIKV 133

The following BLAST results are available for this feature:
BLAST of Cucsat.G16025 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G16025 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004148437.11.22e-8599.24uncharacterized protein LOC101208580 [Cucumis sativus] >KGN62070.1 hypothetical ... [more]
KAA0045879.14.04e-8092.4250S ribosomal protein L25 [Cucumis melo var. makuwa] >TYK13708.1 50S ribosomal p... [more]
XP_008457885.17.14e-7992.42PREDICTED: 50S ribosomal protein L25 [Cucumis melo][more]
XP_022971722.13.90e-7185.71uncharacterized protein LOC111470391 [Cucurbita maxima][more]
XP_022928099.11.11e-7084.96uncharacterized protein LOC111434985 [Cucurbita moschata] >KAG6571398.1 hypothet... [more]
BLAST of Cucsat.G16025 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJM85.92e-8699.24Ribosomal_TL5_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G29... [more]
A0A5A7TX731.96e-8092.4250S ribosomal protein L25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3C6P23.46e-7992.4250S ribosomal protein L25 OS=Cucumis melo OX=3656 GN=LOC103497462 PE=4 SV=1[more]
A0A6J1I2R71.89e-7185.71uncharacterized protein LOC111470391 OS=Cucurbita maxima OX=3661 GN=LOC111470391... [more]
A0A6J1EJW55.38e-7184.96uncharacterized protein LOC111434985 OS=Cucurbita moschata OX=3662 GN=LOC1114349... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020057Ribosomal protein L25, beta domainPFAMPF14693Ribosomal_TL5_Ccoord: 208..290
e-value: 2.0E-22
score: 79.3
IPR037121Ribosomal protein L25, C-terminalGENE3D2.170.120.20Ribosomal protein L25, beta domaincoord: 205..284
e-value: 2.3E-20
score: 74.6
NoneNo IPR availablePANTHERPTHR33284RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEINcoord: 54..298
NoneNo IPR availablePANTHERPTHR33284:SF2RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEINcoord: 54..298
IPR029751Ribosomal protein L25CDDcd00495Ribosomal_L25_TL5_CTCcoord: 89..165
e-value: 4.38866E-7
score: 45.1538
IPR011035Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamilySUPERFAMILY50715Ribosomal protein L25-likecoord: 94..289

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G16025.T1Cucsat.G16025.T1mRNA
Cucsat.G16025.T2Cucsat.G16025.T2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0008097 5S rRNA binding
molecular_function GO:0003735 structural constituent of ribosome