Cucsat.G16023 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G16023
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	upstream activation factor subunit UAF30-like
Location	ctg2178: 608311 .. 617170 (+)
RNA-Seq Expression	Cucsat.G16023
Synteny	Cucsat.G16023

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGATACCAACGTTTCATTTTCTAACATAAATGCAAAAACCATGATAATAATAGTAAACATTAATTTCATTACATTTAATTTCTTTTTTAATTTCTTGATTTTTTCTTTTCCAAATAGATAATTAATTTAATTTTCCAAAAAATGTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCCAATCTCCCATCTGTTCTTCACGCAAAGCTTTTCTTTATTCAAAGCCAAAGCCACACGCCACCAACACTCTACCCTCACCTCCAATTCATACCCAATCTTCCTCGTTTTTCCCTTCTTCCCTTTCAAATATTGGATTACCCAGCAATGGTTTCCGACTCGGAGCTCATCAGCCGGCTCCGAGACTTTCTTCGCAATTCCGACCTCAATACCACTACTACTGCTATCGTCCGCCGTAAGCTCGAGGAAGACTTCGGCATTGATTTGTCTGATAAGAAGCTGTTTATTAGGGAACAGGTCGACTTGTTCCTCCAGACTGAACATGAGAAAGCCGTTCAAGAAGGTTATGCCCATTGCGAGGAAGTCCACCAGGAAGATGGAGATGAAAATTTGAAGATGGAAACGGAGGATGGAGATAGTGAAGACGGAGATAACGACAACGAAGACGACGAAAAGGGTAAAACTAGGTGAGTCTGATTCATTGAGTTTCTTGATTATCAAGATTTTTGGATGTTTAGTCTTGGGTTTTAAATTCTTCTAATGTGTAGTTTTCGCTTTCTGGAGTAATCTTTGTCCATATATGGGTGCAAATAGAAATGAATTGATTCGTTTTCATACTGAAAATAGTGGCAAGTTTGTATCTTGCATATTCTTCGAATTGTAATTTCTTTTGGGTATTGCATCGGTTCGTTCTTTATTTTAGTTGTTAGATCTTTTTTTAATTATTTTTTTCTGATGACGAAATCAGTGTTCTTTGTTACTCGAAGGTTGACGTAAGGGTAAAATCTTCTGTTGAAGTTTGTCTGGGTTTTATATGACGGGCGTAATGCTAATTTTCTGTTGAAGTCTGATATGTTATGTAGATTTTTGAAAAGAAGTATTATGGCTACAAGAAAACTAATTTTTCGATTGTAAAATAATGCAAATATGTTTCTAAACCTAGATTGGTGACCTCCATTTGCACAACTATTTGTGAATGGTATGGGTATGGGAGATAGTCGACCAACATAAGAATCAAACTATAACCATTAGACTTCAACAACCCCTCATTGAAGTGTTTTCTTGCACTTTGTGGATAGATGGTGGTGGAAGAAGTTTGGCTGATGCAAGAGATTACTTACCATGAAGTTTGACTGTACACTTATAGGTAAATAAACCAGCTCTGGCCTTAAATCCCGCTGGTAAACCCTTGTTAGAAATATTACCAAAGAAAGTTTTCGATTTGTTGGAATATATTCGAAGGGCATATTATTCATTAGTAGAGAGTTGTTTAGTTTGGGAAGTGAAGAGCAATTGGGTAGTTATGGGAAGTTAGTTATTTTAGATATGGGTAGTTGGATAGTTATAAGGAGTTGTGCCTTGTTTTGGGTATAATAACCTTGCAAGGGAAGGTGAAAACTAGTACGGATTTATCTGGGAACTAGAATGCAGAGCTAAGACCTCTTGAACGACGAAAGATGGAAGATGTTAGGCTTTTTGAATGTCTAGCTAGGTTATAGCTCTCTTACATGCAATTATAACGACAAGTATTCTTTTTAAGTTGTATCACTAAGTTGCTGTTTCTTATGCCTATGTTGGGAACAATCTTCACCATTTTCTTTTCTTAATTAGAATGTAGAACTTTTTGGAGACTTTGATTCAAAAGTTTGAATGGCACAGCTAAAAACAATGTGTTGACTCTGCTTTGTTGCCTTGGTCTAAAAGGGAGAGAAAAAGTTTATGGATCAACGCTGTCAAATCTGTGGTGTGGGCATTCTGTTTGAAGGGGATCACCTGCTATTTGAGAATTGAGTTCTTTGGGAGGAAAAATTTGAAATATTTAAGTACCATACAACTTCATGGGTGGTCTTTTCATAAATTTTGTAAAAAATATTCAATTTGAAGTAGTGTATCTCCATTTTGTGGTTTTTCTTGTTGTATGTCCATATATTCTTACTTTTTATCCGATGAAAATCAAGTTCTTTTCGTTAAAAAAATGTATTCAATTTGAAATTATTTATTGCTGGCTGGGCTTTTCTTTTCGTTCTCTTTTTCCTCTTTTTTGTAATTCTGTCATCAGATGGTGTTTTTAGCATTAGCTTCTGTTTTCTTGGTTTGTGAGTTCTAGTTCCATTCTAAAGGTAGTTTCAGGTTGCAATGTTTCATATATTAGTGAAGAGTTTATATTTTTTATGAATGAGAAAGAAAAGACACTTGAAATTTTGCTTTGAGTCTTTGATAAATGAGTTATTGTTGTTTGTAATGCAGCTCTGAAAAGGTGAAGAAAAGAGGGGGTGGTTTTACTAAGTTATGTAGCCTTTCCCCACAACTGCAGGAATTTATTGGAGCACCCGAAATGGCAAGGACTGAGGTACATCTAGAAAGTAAAATTTGACCCTTTCTTCCAATCTTCTTAACGTAACCATTTAAGGTAATTTGTTGTCTTTTTTCGTTCCTTCTAATGCAATTATTTGCTATCTTTTGTAAAGGTTGTTAAACAACTATGGAACCACATTAGAGAGAACAATTTGCAAGACCCCAGTAATAGAAGAAATATTCTCTGTGATGAACCGTTAAAAGCACTCTTTGGTGTCAATTCCATCAACATGTTTCAAATGAATAAAGCTCTATCAAAGCATATTTGGCCGTTGGAATCAAATGATGGTGTGCTTTTATAGCTTTAATTCTGTGGTTAATACTTAATATTATGCTACTGTTAATTGTTAACTAAAGCAATTTCTTTTAGCTAATTTTTAATGTTAATCTGGCTACTATGGAACCTTAGTGCTGTTGAAATATTGACTGTTGGATTTTATTTTCTTCAATTTAATCCTAATAGGTACAGGGACACTTGTGCTTTAATTGGATACTCTTGATTTAGAGGAATTTTAAATCATGATGGATTTCATTGAAACCTGTTATTTGTCATCACAAGAAAGAAAATGATTTGGATTCTTAGGTGATTTCAAATTTTGTTTTACATAAAAATTTTCTCGACTAAAATGCAGATTTTGCAGGATTTCATAGAAGTTAGACATTAATTACTTAGAAAGTCTTTGTTGCATCTTAATTTTCTATTATAATTTATAGTTAAGAGCCCATATTAGTAAACTTGTTACTTTTTTCTCTAGTAGCTTTCAAAACTCAACTTTGTAACTATCTTCATTTCAAATCTCTCATTCCAAATAATTTTTTTTTAAATCAAACAAGATTTAAAATTATTTCTTGAACTTTTTTGGTTCCAAACAGAGGAAGTTATTGAACTTTGTTTTTTAATATATATATTTTTCTTTCCTGGATACAGTTATTCCAGCCAAATCTAGTCAGAAAGAAAAGCCACAAAAGGAGAAGCAGCCAAAGGAGAAGCCACAAAAGAAGCGACAGAAGCAAGGGAAAGAAGAAGGTAGACAGGAAAAATAGTTACCTTTATTTTTAATTTTATTACTGTATTATGTTCATGGCAAGAAAGCCCTATTGGAATACTATAACAAAGTACCCAAAACATTATACAACTGCATCTCAATAAGAATAGTAATATTTGTAGGATACAATATAAGTTGTTCAGATGATGTATACCAAGAGGCGCATGTAGGAGTACTACAGCAAAATACCCAAAAATAAGACTTGAAAAATCATTATACAACTGCACCTCAATTAGAATAGCAATATATCTGTAAGATAAAATTTGAATTGTTCAGATGAAGTAGACCAAGAGGCATTGAAAGTTTAAGCACCTTGGATCTCTCTTCGCTTAACTTTCTAGATTCATTCGTTTCTTTCTGATCATATGCCCCCACAAGTTGCTTAGACCCATTAGTGCATAATATAATTTAGCAGTTAGCACAGCTTTTCATCCCATGGTCAATAGCTACCAAATCCTAGATTTTACCCCAGTGAGTGGGGGGTCATCATAAATTGGTTGGCATCGGTTTTGGGCTCAAACTAGCGCTGACCACACTGATGGTTCCTTCTCCAAAATGCATTTAGTTAATGTGTCCAAGATTTGCCATTTTGGAGCTAGGAAGGTAGAGAAGAAGGGACATACTGGAAAAGTTTTCATCTTTTTTCAAACTTCCGTTTTTCCCTGTGGACAATCTGCAGGTGCTTGTTTCTGCACTAGATCAGGAAGTGAGGTATTTCCTCATCCTGTGGGATTTGTATGAAACCAAAAAACAAAGTTTCTTTGTTTGAAGTGTACCATATATAAACGAATAAGTACTACTGAGATGCTTTTTATTTACCACATTTTTCTGGATAAAAATGAATTGAGTCATTCAATTAAAAGTAAATTGAGCTTAGATGACATGGGAAAGGATAGTATCCTTTAGTTAATTGCCCAACTTAATTGCTTTAGAATGAATTAGAAAAGGAGTAAATCTTTAAATTACACTTTTCCAGTTTCAGCTAACTGAAGGTTTGATTGATGTCTAATAAACCTTCTTTCCAGATTCAGATGACTCTGCAAGAGAGGATAAGCGGCAAAAGAAAGGGAAATCTGGTTTTCTTGCTCCTCTTCCACTTTCGAATGCTCTGGTGGCATTTCTTGGTACTGGAGAGGATGCATTGCCTCGCTCTGACGTAGTGAAAAGAATGTGGGATTACATTAAGCAAAATAACCTTCAGGTAGTTGGCCATAGAGAATGTAATATCTTTTCATTGCTTCTTGACTGTTACATTCTTTTATCATGCATTATCGCTCCAAATCAATTCGATTTATTGCATTAATTATTGTTCTTACCTAGTCATAGTTTTTCATGGTATTTAGTTATATTTTTTATCTTTGTAACAAGGTAACTTTCAAGAGTGCTAGACTCCCAAATTTCCAACTAAGGAAATCCCACAAAATTCTGCACACCGTAACTCTCAACCCACCCCCACTATTTACGACTAAAAGCCCTAAAAAGCTTACTGACTAATTACTGATATGCCCTTCTAATAACCATGCTACTATTTACTAATGATCCTACTAATTTCATAACTAGGGGTCTTACAGCATGGAATCTCTTATTTTCCTTGTGTTTGAGTATGCTTGAACTTTTAGAAACATAGCTTGTTACAATCGAATAAATGTTAGAAGTTTTGTTTTGAACTTCCATTACTAAAGATCTTTTTATCATTGTTTTAATTTTTCTTGTTCATTTTAAAGTTTGCAATTATGATATATAAGTAAATAGCTAGTAAATTTGTTAGGGCTTTTAGTTATAAAAGGAAAGGAATGAGTTTGGGAGCAAGGTGTGAAGAATTTGAGTAGTAATTTCCATTAGGCGATGCTTGTGGGGGCTTCATTCTATTCTCATTGAAGACTACTAAGTATTATCAGATAACATGAGTTTCATCTTAAAACCAAAAACCAATTGACTATGAAAGAAACTCATCTTTCTTACAAACATTATGAAGTCCCTTTATGTTTTCAATAGGATCCTCAACATGCCCTCCAAAATGGTGCTTCTTTGGATTCATCATTCTTGAACTGAACCCCCATTTTGTTTTTGAATCGAATACCCATCTGGGCTTTATGGGCTCTGATACACATTAGATAACATGAAACATGCTGGGGTGTGTGAGGTTTTATGGTTTCTGTGGCGCAAGTGGAATAGTAGGGTGTTGAGGGGAGTTGAGCGGGATCATAGGGAGCTTTGGTTTTTTGTTTGTTTTCATGTTTTCAGTTTTGGACTTTGATTTCAAAGACCTTTTGTAATTATTCTATAGGTGTAATTTCACATAGTTGGAGTCCCTTCTATAATGGGAGTCCCTCCCTTTCGGTGAGCCTGGATTTTTGGTACGTTTGTATATTATTCCATTATTTCTCAATAAGAGTCGTTTCCATAAGAAAGATTGAAATTTCTCTTAGGCCATGAGGGATCACATAATTACCTTTAATCAACATCTGATAATGTGGGAAATTGGGAGTTTGAAATGGGGACCTATGCCTTTTAGATTTGAAATTTTCTAATCGTATGACCACTTTTTCATGTGGGAAAAGGTGGAGGCAATATGAGGGTTGACATGGTTTTGTTATTATGCAAAGCAGCAAAGGTGAAAACTAAATCCAACCTTTGTTGGTGGAACAAGGAACTTTTCAGAAACATTGATTCTGAAATGGTTGATTTATCAAATTCCATCAATGATTTATCAAACTATAAGATGGATTGTGAGGGAATCTATGAAGAAACTAAACTATACAAGAACAGTTTCTGAATATGTGAAGGAACTTAGTGTTGATGTTGAATATTCACCATATGCCTGAGTAGGACGAACAATTTAACTTCATTTTAGGGTTGCAGTCGGTTCACAAGTCAAGATTAGAAGACAGGGAGCCTAAGACTTACTTAATCTCTTGTCTTTGTCAAAATGGTTCTTAGAGCTTAAGCTCACCCTTCTTGTCCTTAACTTTCTACCTTCCTTTTTCTTTGTTTGATGAAGAAGAGGTATAGTCTCTATGTTGGGTACCAACAGTGGTAAAGACTGAAGAGGTCCTTGGCTTCCTTCCCTCCCTTCTAATGCCGGATCGTGCCCACAGAAATGAAGTTACGCATGTTGTTCCCAAACATATGGTGAATGTCCAACATTGAGGAATTCTTGCTTACTTTACCTGTGTGGCCTACGGAGTCCTCCCCTTAGTTCAACCTTTCTCAAATCCAATCCTTTACTTGGATGTCTCACTGGATTTTCAACAACCCACAAAGATTGAATCTATCAAGACATGCCTTTCTTTTTTATGGGAGTTTATACCTTGTCCTTTCATTCAAATGAAGGTTGGAAGTGAGTGCCTTGGACAACCCCTGAGGTCATCATCATAGATAATACTTTCGAGTTTTGAGGAAGATTTTTTTATTTGAGCACGATCTCTGTGGTTCTTAAGTAGGTCAGAGTCTTCAGATTAACAGCCTGTTAAGTATTTCATTGCATCAGATGATGTGGGAGTAGGTGGGGAAACCAGCTTTCATAGAAGAAAATGAAAGAATATGAGAAAGGGCCTCCATAACAAGAAGCGCGCAAGAAACTAAACTAACTTATGGGGATATTGGGTAGTATTAGAGCTGAAATCATGAATTCAATTCTCTCTGTTTCCTTCCATATTAGTAATCCCCTTGTTGGGGTTTGTAAATTAAATTCAATATCAGAACCCACAAATTAGGGATAATATGATGAAATGATTAGCTTTACTCTACGATCATTCCAGCTTGGATTTGGTGCTGATTTATTGGCAATCCTATCTCATTTCTTCCTTGTTTTTTTGGATTCCACTTGTTGAGAAGGTAGCCAAAATCCTCGGAAGATAGAGAATGCCTCGTTTTACTTAAGAGGATAGGCATGCTTTTTATATTAAGTGTAATTTTCCCCCACTGCCGTCTCCCCTTTTAGGTTGTCTTGTACGCCAGTCATCATGCCAGTTCAATCTAGTGAACTAGTTTGTAAGCTCTGAGTATAAATTCTTCACCATGGAATTTTGGTTAAACTGTTGATGAGAACTGTGGATATTCACTGATATACTGAGAATATAATTTGTTGACGGCATGTTGGTGGACTCAGAAACTTGATGAAGTTCAAGATGTGCGTATGTCTATTGTTAACTGATATTTTCCATAACCCAGAAAGTATTGTGAAAATAAACGTTCTTACTACTTGGGTCATTTAATACAAAAGTTTTTGAGCTTGAATGAATGTACAAGAAAGTGTTCACAATGAACATTGAAAATTTGTGTTACTTTGATGATGTGTATCATTTAACAACTGAAATGTTTCTTATTTGTTCTTGAAGGACCCTTCTGACAAAAGGAGAATAATTTGTGACGAGAGGCTAAAAGAACTCTTTGATGTCGATTCCTTTAATGGGTTCACTGTTTCGAAACTCCTGGCCACGCATTTTATAAAGATGAAACAGTAAGTTCCTCCTACACATTGTCTTTGTTGATGCAAGAGAATCTAGAATTTTGCTTGAGATAGTTTTAGTGGTCTCTTTTTTGTGTGTTATTCTCTGGAATTCACCAACAAGGCAATGGAAAATCTGTTTTTATTGACCTTGTGTTATCTCTTCTCTTTGGTGGGTGGTCTGTTGCAAAATCTTTCAGAATTAATTAGACTAACCTTGTCAATTCTTCTATACTTCCCTTAGCTTTCAAGTAGTTGCTTAAGTTCTTAAAAAAAGAACCAAAAAGAAAATGTCCCTCATATTGGCTAACTACATTTTGTGTTGTAATTGTCACTATTTTGTTTTTGTTTTGTTCATTGCTTACCAAACTAAGCAGTTCTTTCCCTCATTCTTCTCTCCCCAAAACTTCTATGAAAGATTCATTGAAGAATGTTAACGCCTGAGAGATTAAAAATTGTGGGGAAGAAACTGGTTAGGAGGTGACTTTCATTTCATGTGGAAAGATAACATTTTCCTTCTCTTATTGAGCTTTTTTGTTCTTTCCATCTCCTCTTCTTGGTCGAACATGTTTGGATTGATTTCTTAGGTGTTTACAAGTGCAAAAATATGTTTCTAAACACTTAGAAGGTCAATCCATGCATGCCGTTCTTTACTAATTATACTATGAAGGAAATAATGATGGGAGGTTGAAGCAATATAGTCGGTAATTTGACGTAGGCGGATCGTACTATTCATTTTTATATTTTATTTTTGGATTATCTTTTTATAACTTTTTTTAGATAATTGTGGGGATAGTGATTATCATGTATACCATTGAGCTAAGC

Coding sequence (CDS)

ATGGTTTCCGACTCGGAGCTCATCAGCCGGCTCCGAGACTTTCTTCGCAATTCCGACCTCAATACCACTACTACTGCTATCGTCCGCCGTAAGCTCGAGGAAGACTTCGGCATTGATTTGTCTGATAAGAAGCTGTTTATTAGGGAACAGGTCGACTTGTTCCTCCAGACTGAACATGAGAAAGCCGTTCAAGAAGGTTATGCCCATTGCGAGGAAGTCCACCAGGAAGATGGAGATGAAAATTTGAAGATGGAAACGGAGGATGGAGATAGTGAAGACGGAGATAACGACAACGAAGACGACGAAAAGGGTAAAACTAGCTCTGAAAAGGTGAAGAAAAGAGGGGGTGGTTTTACTAAGTTATGTAGCCTTTCCCCACAACTGCAGGAATTTATTGGAGCACCCGAAATGGCAAGGACTGAGGTTGTTAAACAACTATGGAACCACATTAGAGAGAACAATTTGCAAGACCCCAGTAATAGAAGAAATATTCTCTGTGATGAACCGTTAAAAGCACTCTTTGGTGTCAATTCCATCAACATGTTTCAAATGAATAAAGCTCTATCAAAGCATATTTGGCCGTTGGAATCAAATGATGTTATTCCAGCCAAATCTAGTCAGAAAGAAAAGCCACAAAAGGAGAAGCAGCCAAAGGAGAAGCCACAAAAGAAGCGACAGAAGCAAGGGAAAGAAGAAGATTCAGATGACTCTGCAAGAGAGGATAAGCGGCAAAAGAAAGGGAAATCTGGTTTTCTTGCTCCTCTTCCACTTTCGAATGCTCTGGTGGCATTTCTTGGTACTGGAGAGGATGCATTGCCTCGCTCTGACGTAGTGAAAAGAATGTGGGATTACATTAAGCAAAATAACCTTCAGGACCCTTCTGACAAAAGGAGAATAATTTGTGACGAGAGGCTAAAAGAACTCTTTGATGTCGATTCCTTTAATGGGTTCACTGTTTCGAAACTCCTGGCCACGCATTTTATAAAGATGAAACAGTAA

Protein sequence

MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMKQ

Homology

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BLAST of Cucsat.G16023 vs. ExPASy Swiss-Prot
Match: Q08747 (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 9.8e-13
Identity = 69/205 (33.66%), Postives = 112/205 (54.63%), Query Frame = 0


Query: 15  LRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHCEEVH 74
           L + DL T TT  VR  L+E + ID+  +   I + +   L    E+   E     E++ 
Sbjct: 15  LSDMDLETVTTKKVRMALKEVYAIDVESQGKAINKLIRKHLDLVKERPRFE--RSLEDLL 74

Query: 75  QEDGDENLKMETEDGDSE--DGDNDNEDDEKGKTSSEKVK---KRGGGFTKLCSLSPQLQ 134
           +E+    +++  E   S+   G+  N+ + KG T  EK K    +    T+  +LS  L 
Sbjct: 75  KENATLAIELTKEITVSKRSSGEEKNDSETKG-THVEKKKGTVSKSPISTRKVTLSKSLA 134

Query: 135 EFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALS 194
             +G  E+ RTEVV++LW +I+ +NLQ+P+N++ ILCDE L+ + G  S NMF+M+K L+
Sbjct: 135 SLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG-KSTNMFEMHKILA 194

Query: 195 KHIW-PLESNDVIP--AKSSQKEKP 212
            H+  P + +D  P   +  +KEKP
Sbjct: 195 SHMTEPKKISDCPPLIQEVRRKEKP 215

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BLAST of Cucsat.G16023 vs. ExPASy Swiss-Prot
Match: Q05024 (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 8.3e-12
Identity = 59/198 (29.80%), Postives = 107/198 (54.04%), Query Frame = 0


Query: 28  VRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEG---YAHCEEVHQEDGDENLKM 87
           VR+ L+  + ++L  ++  I E     L  E    +QE         ++   D + +L++
Sbjct: 28  VRKALQILYSVNLDSQRKLINE-----LILERFGDIQENPRVLIPKNDLISRDQELSLRL 87

Query: 88  ETEDGDSEDGDNDNEDDEKGKTSSEKVKKR--------GGGFTKLCSLSPQLQEFIGAPE 147
           + E    E+    +    KGK+ S+  +K+             +   LS  LQ+F+G+ E
Sbjct: 88  QKE----EERPLRSTRKRKGKSESKSKRKKKKNDSPDSNSISVRKVLLSAPLQKFLGSEE 147

Query: 148 MARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE 207
           + RT+VVK +W +I+E++LQ+P +RR ILCDE ++ +FG   + MF MNK L+KH++   
Sbjct: 148 LPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG-KKMTMFSMNKLLTKHLF--N 207

Query: 208 SNDVIPAKSSQKEKPQKE 215
            ++++  +  QK+ P+KE
Sbjct: 208 PDEIVKHEEEQKQTPEKE 213

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BLAST of Cucsat.G16023 vs. ExPASy Swiss-Prot
Match: O74503 (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.2e-11
Identity = 63/221 (28.51%), Postives = 108/221 (48.87%), Query Frame = 0


Query: 11  LRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHEKAVQEGYAHC 70
           ++  L   D  T +   VR+ LEE   +DLS  K  +   +          + +E     
Sbjct: 8   IKQILGTVDRQTVSAKQVRQLLEERRKVDLSAHKKDLNALILKCFDETAAPSEKESLEKQ 67

Query: 71  EEVHQEDGDENLKMETEDG--DSEDGDNDNEDDEKGKTSSEKVKKRGGGFTKLCSLSPQL 130
               +  G    +  TE+G   ++      ED E+G               K   LSP+L
Sbjct: 68  APARKTKGKRATENGTEEGKKPAKRTRKRKEDGEEGGKRKRNQDPANNPLNKPMKLSPKL 127

Query: 131 QEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKAL 190
            EF+G  +++R + VK+LW +I+ ++LQDP+++R ILCD+ LK++F V++++MF MNK L
Sbjct: 128 AEFLGLEQLSRPQTVKKLWEYIKAHDLQDPNDKRTILCDDKLKSVFEVDTLHMFTMNKYL 187

Query: 191 SKHIWPLESNDVIPAKSSQKEKP--------QKEKQPKEKP 222
           +  +  +  +D +P    + E+P        Q+EK+  E P
Sbjct: 188 TNLMTKI-PDDQLPKPQPKNEEPAAPNDLPKQEEKELVEPP 227

[Close]

BLAST of Cucsat.G16023 vs. ExPASy Swiss-Prot
Match: Q9P7S3 (SWI/SNF and RSC complexes subunit ssr3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ssr3 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 7.5e-05
Identity = 25/56 (44.64%), Postives = 33/56 (58.93%), Query Frame = 0


Query: 257 LSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVD 313
           LS A    LG  E   P  D+V  +W YIK + LQD  +KR I CD+ L++LF+ D
Sbjct: 208 LSKAFANILGIREGTRP--DIVSYLWQYIKFHRLQDMEEKRLINCDKALRDLFEAD 261

[Close]

BLAST of Cucsat.G16023 vs. ExPASy Swiss-Prot
Match: Q9SD34 (Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana OX=3702 GN=At3g51120 PE=2 SV=3)

HSP 1 Score: 46.2 bits (108), Expect = 8.3e-04
Identity = 32/108 (29.63%), Postives = 50/108 (46.30%), Query Frame = 0


Query: 230 KEEDSDDSAREDKRQKKGKSGFLAPLPLSNA--------LVAFLGTGE-DALPRSDVVKR 289
           +   SD     +K   K  S  L   P   +         V+F+  G+   L + DV   
Sbjct: 288 RRRTSDSPTLPNKLDGKNPSNILKKAPGDTSWATKELLEFVSFMKNGDTSVLSQFDVQGL 347

Query: 290 MWDYIKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATHFI 329
           + DYIK+ NL+DP  K +++CD+ L +LF       F + KLL +H +
Sbjct: 348 LLDYIKKKNLRDPLQKSQVLCDQMLVKLFGKQRVGHFEMLKLLESHVL 395

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BLAST of Cucsat.G16023 vs. NCBI nr
Match: XP_004148436.1 (upstream activation factor subunit UAF30 [Cucumis sativus] >KGN62068.1 hypothetical protein Csa_006385 [Cucumis sativus])

HSP 1 Score: 632 bits (1630), Expect = 5.80e-228
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0


Query: 1   MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHE 60
           MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHE
Sbjct: 1   MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHE 60

Query: 61  KAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKRGGGFTK 120
           KAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKRGGGFTK
Sbjct: 61  KAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKRGGGFTK 120

Query: 121 LCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSIN 180
           LCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSIN
Sbjct: 121 LCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSIN 180

Query: 181 MFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSARE 240
           MFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSARE
Sbjct: 181 MFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSARE 240

Query: 241 DKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII 300
           DKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII
Sbjct: 241 DKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII 300

Query: 301 CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ 332
           CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
Sbjct: 301 CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ 332

[Close]

BLAST of Cucsat.G16023 vs. NCBI nr
Match: XP_008457882.1 (PREDICTED: upstream activation factor subunit UAF30-like [Cucumis melo])

HSP 1 Score: 608 bits (1568), Expect = 1.63e-218
Identity = 320/332 (96.39%), Postives = 325/332 (97.89%), Query Frame = 0


Query: 1   MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHE 60
           MVSDSELI RLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKK FIREQVDLFLQTEHE
Sbjct: 1   MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHE 60

Query: 61  KAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKRGGGFTK 120
           KAV+EGY HCEEV QEDGDENLKMETEDGDSEDGDND+EDDEKGKTSS+K KKRGGGF+K
Sbjct: 61  KAVEEGYGHCEEVEQEDGDENLKMETEDGDSEDGDNDDEDDEKGKTSSDKAKKRGGGFSK 120

Query: 121 LCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSIN 180
           LCSLSPQLQEFIGA EMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSIN
Sbjct: 121 LCSLSPQLQEFIGATEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSIN 180

Query: 181 MFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSARE 240
           MFQMNKALSKHIWPLESNDVIPAKSSQKEK QKEKQPKEKPQKKRQKQGKEEDSDDSARE
Sbjct: 181 MFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSARE 240

Query: 241 DKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII 300
           DKRQKKGKSGFLAPLPLS+ALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII
Sbjct: 241 DKRQKKGKSGFLAPLPLSDALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII 300

Query: 301 CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ 332
           CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
Sbjct: 301 CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ 332

[Close]

BLAST of Cucsat.G16023 vs. NCBI nr
Match: XP_038901460.1 (upstream activation factor subunit spp27-like isoform X1 [Benincasa hispida])

HSP 1 Score: 554 bits (1428), Expect = 4.03e-197
Identity = 297/336 (88.39%), Postives = 309/336 (91.96%), Query Frame = 0


Query: 1   MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHE 60
           MVSDSELI RLR+FLRNSDLNTTTTAIVRRKLEEDFGIDLSDKK FIREQVD+FLQTEHE
Sbjct: 1   MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDVFLQTEHE 60

Query: 61  KAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKRG----- 120
           +AV+EG   CEEV QE GDENLK E +DGDSEDGDND+EDDEKGK  S K+ K G     
Sbjct: 61  RAVEEGCGDCEEVDQEGGDENLKTEEDDGDSEDGDNDDEDDEKGKAGSNKLSKEGKKRGG 120

Query: 121 GGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFG 180
           GGF+KLCSLSPQLQEFIGAPEMARTEVVKQLWNHIR  NLQDPSNRRNILCD+ LKALFG
Sbjct: 121 GGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRGKNLQDPSNRRNILCDDSLKALFG 180

Query: 181 VNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSD 240
           VNSINMFQMNKALSKHIWPLESNDVIPA SSQKEK QKEKQPKEKPQKKRQKQGKEEDSD
Sbjct: 181 VNSINMFQMNKALSKHIWPLESNDVIPANSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSD 240

Query: 241 DSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSD 300
           DSARE+KRQKKGKSGFLAPL LS+ALV FLGTGEDALPRSDVVKRMWDYIKQNNLQDPSD
Sbjct: 241 DSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSD 300

Query: 301 KRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK 331
           KRRIICDERLKELFDVDSF+GFTVSKLLATHFIK K
Sbjct: 301 KRRIICDERLKELFDVDSFHGFTVSKLLATHFIKTK 336

[Close]

BLAST of Cucsat.G16023 vs. NCBI nr
Match: XP_023512445.1 (upstream activation factor subunit spp27-like [Cucurbita pepo subsp. pepo] >KAG6571401.1 hypothetical protein SDJN03_30316, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 530 bits (1366), Expect = 1.20e-187
Identity = 287/338 (84.91%), Postives = 304/338 (89.94%), Query Frame = 0


Query: 1   MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHE 60
           MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKK FIREQVDLFLQTEHE
Sbjct: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60

Query: 61  KAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKR--GGGF 120
           +  +EG   CEE  QEDGDENLK E EDGDSEDGDND+ DDEKGKT S K+ K+  GGGF
Sbjct: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHDDEKGKTGSNKLAKKRGGGGF 120

Query: 121 TKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNS 180
           +KLCSLSPQLQEFIG PEMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+S
Sbjct: 121 SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS 180

Query: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQ-----PKEKPQKKRQKQGKEED 240
           INMFQMNKALSKHIWPLESNDVIPAKSSQKEK QKEKQ     PKEKPQKKRQKQGKEED
Sbjct: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEED 240

Query: 241 SDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP 300
           SDDSARE+KRQKKGKSGFLAPL LS+ALV FLGTGE AL RSDVVKRMWDYIKQNNLQDP
Sbjct: 241 SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDP 300

Query: 301 SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK 331
           SDKRR+ICDE+LKELFDV+SF+GFTVSKLLATHF+K K
Sbjct: 301 SDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK 338

[Close]

BLAST of Cucsat.G16023 vs. NCBI nr
Match: XP_022928098.1 (upstream activation factor subunit UAF30-like [Cucurbita moschata])

HSP 1 Score: 530 bits (1365), Expect = 1.70e-187
Identity = 287/338 (84.91%), Postives = 304/338 (89.94%), Query Frame = 0


Query: 1   MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHE 60
           MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKK FIREQVDLFLQTEHE
Sbjct: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60

Query: 61  KAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKR--GGGF 120
           +  +EG   CEE  QEDGDENLK E EDGDSEDGDND+ DDEKGKT S K+ K+  GGGF
Sbjct: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHDDEKGKTGSNKLAKKRGGGGF 120

Query: 121 TKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNS 180
           +KLCSLSPQLQEFIG PEMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+S
Sbjct: 121 SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDS 180

Query: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQ-----PKEKPQKKRQKQGKEED 240
           INMFQMNKALSKHIWPLESNDVIPAKSSQKEK QKEKQ     PKEKPQKKRQKQGKEED
Sbjct: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEED 240

Query: 241 SDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP 300
           SDDSARE+KRQKKGKSGFLAPL LS+ALV FLGTGE AL RSDVVKRMWDYIKQNNLQDP
Sbjct: 241 SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDP 300

Query: 301 SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK 331
           SDKRR+ICDE+LKELFDV+SF+GFTVSKLLATHF+K K
Sbjct: 301 SDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK 338

[Close]

BLAST of Cucsat.G16023 vs. ExPASy TrEMBL
Match: A0A0A0LJW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G295440 PE=4 SV=1)

HSP 1 Score: 632 bits (1630), Expect = 2.81e-228
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0


Query: 1   MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHE 60
           MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHE
Sbjct: 1   MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHE 60

Query: 61  KAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKRGGGFTK 120
           KAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKRGGGFTK
Sbjct: 61  KAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKRGGGFTK 120

Query: 121 LCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSIN 180
           LCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSIN
Sbjct: 121 LCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSIN 180

Query: 181 MFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSARE 240
           MFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSARE
Sbjct: 181 MFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSARE 240

Query: 241 DKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII 300
           DKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII
Sbjct: 241 DKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII 300

Query: 301 CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ 332
           CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
Sbjct: 301 CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ 332

[Close]

BLAST of Cucsat.G16023 vs. ExPASy TrEMBL
Match: A0A1S3C766 (upstream activation factor subunit UAF30-like OS=Cucumis melo OX=3656 GN=LOC103497460 PE=4 SV=1)

HSP 1 Score: 608 bits (1568), Expect = 7.89e-219
Identity = 320/332 (96.39%), Postives = 325/332 (97.89%), Query Frame = 0


Query: 1   MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHE 60
           MVSDSELI RLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKK FIREQVDLFLQTEHE
Sbjct: 1   MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHE 60

Query: 61  KAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKRGGGFTK 120
           KAV+EGY HCEEV QEDGDENLKMETEDGDSEDGDND+EDDEKGKTSS+K KKRGGGF+K
Sbjct: 61  KAVEEGYGHCEEVEQEDGDENLKMETEDGDSEDGDNDDEDDEKGKTSSDKAKKRGGGFSK 120

Query: 121 LCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSIN 180
           LCSLSPQLQEFIGA EMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSIN
Sbjct: 121 LCSLSPQLQEFIGATEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSIN 180

Query: 181 MFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSARE 240
           MFQMNKALSKHIWPLESNDVIPAKSSQKEK QKEKQPKEKPQKKRQKQGKEEDSDDSARE
Sbjct: 181 MFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSARE 240

Query: 241 DKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII 300
           DKRQKKGKSGFLAPLPLS+ALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII
Sbjct: 241 DKRQKKGKSGFLAPLPLSDALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRII 300

Query: 301 CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ 332
           CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ
Sbjct: 301 CDERLKELFDVDSFNGFTVSKLLATHFIKMKQ 332

[Close]

BLAST of Cucsat.G16023 vs. ExPASy TrEMBL
Match: A0A6J1EMX5 (upstream activation factor subunit UAF30-like OS=Cucurbita moschata OX=3662 GN=LOC111434984 PE=4 SV=1)

HSP 1 Score: 530 bits (1365), Expect = 8.25e-188
Identity = 287/338 (84.91%), Postives = 304/338 (89.94%), Query Frame = 0


Query: 1   MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHE 60
           MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKK FIREQVDLFLQTEHE
Sbjct: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60

Query: 61  KAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKR--GGGF 120
           +  +EG   CEE  QEDGDENLK E EDGDSEDGDND+ DDEKGKT S K+ K+  GGGF
Sbjct: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHDDEKGKTGSNKLAKKRGGGGF 120

Query: 121 TKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNS 180
           +KLCSLSPQLQEFIG PEMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+S
Sbjct: 121 SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDS 180

Query: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQ-----PKEKPQKKRQKQGKEED 240
           INMFQMNKALSKHIWPLESNDVIPAKSSQKEK QKEKQ     PKEKPQKKRQKQGKEED
Sbjct: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEED 240

Query: 241 SDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP 300
           SDDSARE+KRQKKGKSGFLAPL LS+ALV FLGTGE AL RSDVVKRMWDYIKQNNLQDP
Sbjct: 241 SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDP 300

Query: 301 SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK 331
           SDKRR+ICDE+LKELFDV+SF+GFTVSKLLATHF+K K
Sbjct: 301 SDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK 338

[Close]

BLAST of Cucsat.G16023 vs. ExPASy TrEMBL
Match: A0A6J1I6I7 (upstream activation factor subunit spp27-like OS=Cucurbita maxima OX=3661 GN=LOC111470389 PE=4 SV=1)

HSP 1 Score: 522 bits (1344), Expect = 1.30e-184
Identity = 284/338 (84.02%), Postives = 301/338 (89.05%), Query Frame = 0


Query: 1   MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHE 60
           MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKK FIREQVDLFLQTEHE
Sbjct: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60

Query: 61  KAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKR--GGGF 120
           +  +EG   CEE  QEDGDENLK E EDGDSEDGDND  D EKGK  S K+ K+  GGGF
Sbjct: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDGHDGEKGKMGSNKLAKKRGGGGF 120

Query: 121 TKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNS 180
           +KLCSLSPQLQEFIG PEMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+S
Sbjct: 121 SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS 180

Query: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKPQ-----KEKQPKEKPQKKRQKQGKEED 240
           INMFQMNKALSKHIWPLESNDVIPAKSSQKEK Q     KEKQPKEK QKKRQKQGKEED
Sbjct: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKKQQEKQEKEKQPKEKLQKKRQKQGKEED 240

Query: 241 SDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP 300
           SDDSARE+KRQKKGKSGFLAPL LS+ALV FLGTGE++L RSDVVKRMWDYIKQNNLQDP
Sbjct: 241 SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGENSLSRSDVVKRMWDYIKQNNLQDP 300

Query: 301 SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK 331
           SDKRR+ICDE+LKELFDVDSF+GFTVSKLLATHF+K K
Sbjct: 301 SDKRRVICDEKLKELFDVDSFHGFTVSKLLATHFVKTK 338

[Close]

BLAST of Cucsat.G16023 vs. ExPASy TrEMBL
Match: A0A5D3CU37 (Upstream activation factor subunit UAF30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002330 PE=4 SV=1)

HSP 1 Score: 527 bits (1357), Expect = 3.62e-184
Identity = 279/291 (95.88%), Postives = 284/291 (97.59%), Query Frame = 0


Query: 1   MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHE 60
           MVSDSELI RLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKK FIREQVDLFLQTEHE
Sbjct: 1   MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHE 60

Query: 61  KAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKRGGGFTK 120
           KAV+EGY HCEEV QEDGDENLKMETEDGDSEDGDND+EDDEKGKTSS+K KKRGGGF+K
Sbjct: 61  KAVEEGYGHCEEVEQEDGDENLKMETEDGDSEDGDNDDEDDEKGKTSSDKAKKRGGGFSK 120

Query: 121 LCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSIN 180
           LCSLSPQLQEFIGA EMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSIN
Sbjct: 121 LCSLSPQLQEFIGATEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSIN 180

Query: 181 MFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDSDDSARE 240
           MFQMNKALSKHIWPLESNDVIPAKSSQKEK QKEKQPKEKPQKKRQKQGKEEDSDDSARE
Sbjct: 181 MFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSARE 240

Query: 241 DKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQ 291
           DKRQKKGKSGFLAPLPLS+ALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQ
Sbjct: 241 DKRQKKGKSGFLAPLPLSDALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQ 291

The following BLAST results are available for this feature:

BLAST of Cucsat.G16023 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q08747	9.8e-13	33.66	Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATC...	[more]
Q05024	8.3e-12	29.80	Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]
O74503	3.2e-11	28.51	Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 97...	[more]
Q9P7S3	7.5e-05	44.64	SWI/SNF and RSC complexes subunit ssr3 OS=Schizosaccharomyces pombe (strain 972 ...	[more]
Q9SD34	8.3e-04	29.63	Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Cucsat.G16023 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148436.1	5.80e-228	100.00	upstream activation factor subunit UAF30 [Cucumis sativus] >KGN62068.1 hypotheti...	[more]
XP_008457882.1	1.63e-218	96.39	PREDICTED: upstream activation factor subunit UAF30-like [Cucumis melo]	[more]
XP_038901460.1	4.03e-197	88.39	upstream activation factor subunit spp27-like isoform X1 [Benincasa hispida]	[more]
XP_023512445.1	1.20e-187	84.91	upstream activation factor subunit spp27-like [Cucurbita pepo subsp. pepo] >KAG6...	[more]
XP_022928098.1	1.70e-187	84.91	upstream activation factor subunit UAF30-like [Cucurbita moschata]	[more]

BLAST of Cucsat.G16023 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJW7	2.81e-228	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G295440 PE=4 SV=1	[more]
A0A1S3C766	7.89e-219	96.39	upstream activation factor subunit UAF30-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1EMX5	8.25e-188	84.91	upstream activation factor subunit UAF30-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1I6I7	1.30e-184	84.02	upstream activation factor subunit spp27-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A5D3CU37	3.62e-184	95.88	Upstream activation factor subunit UAF30-like OS=Cucumis melo var. makuwa OX=119...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019835	SWIB domain	SMART	SM00151	swib_2	coord: 168..247 e-value: 6.8E-38 score: 141.9 coord: 299..380 e-value: 8.9E-31 score: 118.2
IPR036885	SWIB/MDM2 domain superfamily	GENE3D	1.10.245.10	SWIB/MDM2 domain	coord: 292..380 e-value: 3.1E-30 score: 106.0
IPR036885	SWIB/MDM2 domain superfamily	GENE3D	1.10.245.10	SWIB/MDM2 domain	coord: 162..250 e-value: 2.0E-32 score: 112.9
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 295..379
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 164..246
None	No IPR available	GENE3D	1.10.10.60		coord: 47..109 e-value: 7.3E-10 score: 40.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..299
None	No IPR available	PANTHER	PTHR13844:SF53	SWIB COMPLEX BAF60B DOMAIN-CONTAINING PROTEIN	coord: 51..378
None	No IPR available	PANTHER	PTHR13844	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D	coord: 51..378
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 303..375 e-value: 6.03058E-33 score: 116.104
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 172..242 e-value: 5.4532E-38 score: 129.2
None	No IPR available	SUPERFAMILY	109715	DEK C-terminal domain	coord: 51..106
IPR003121	SWIB/MDM2 domain	PFAM	PF02201	SWIB	coord: 302..375 e-value: 1.9E-26 score: 91.7 coord: 171..242 e-value: 2.0E-30 score: 104.5
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 167..244 score: 23.129883
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 298..377 score: 25.397083
IPR014876	DEK, C-terminal	PFAM	PF08766	DEK_C	coord: 52..105 e-value: 7.4E-17 score: 61.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G16023.T1	Cucsat.G16023.T1	mRNA
Cucsat.G16023.T2	Cucsat.G16023.T2	mRNA
Cucsat.G16023.T3	Cucsat.G16023.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus