Cucsat.G15734 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G15734
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	serine/threonine-protein phosphatase 7 long form homolog isoform X1
Location	ctg2009: 4903869 .. 4904522 (+)
RNA-Seq Expression	Cucsat.G15734
Synteny	Cucsat.G15734

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGGCGTTATACCATTGTCATAATTGTCCGCAAATATGTTGATCACCTACCGAATGTTTTTTGGTCGGCTGATCAACTCTCAGGTAGTAAAATATTATACCAATGTTGCGTAGGCATGTTTTTTGTTGTTTTCTTATGTTCGTTTTTTTTTAACAGATTAATTGGACACCATACACGTCCCACATTATGGCATTGCTTCCACATCAATGTTATAACGGTCAAGCGATGTGGACATATGTGGGTCCTATGATTTGCTTTCATCTCGTTGAGAAGCATCAAGCAGATCGTGTATTGCGACAGTTCCATATGCTACAAATGCCACCAGAGTTTTGCTCCACAGATCAGGGCCTACACCAAATTGATTTAAGAGGCAAGCACGATCAAGATTGGAGTAGGATTCATGCAGAGCATATAGCAATGTGGCATTCACGAAATAATTTTTGTGCCGAAGCAGAAGCAACACAGAAGCCGACAGTATCAGATAACTACTTTTCCTGGTACATGTCGATTACCCGACGCTTCATGACACCTGATGGCGCTTACTGTTATCGCATGGTAATAGTTTTAATATGATTTATAAATTTAATACAAGCATGAACATTTTTTAATTATATTATTTACAATCGTTCAGAATAATTTTGTTGAAGACGTACG

Coding sequence (CDS)

ATGTTGATCACCTACCGAATGTTTTTTGGTCGGCTGATCAACTCTCAGATTAATTGGACACCATACACGTCCCACATTATGGCATTGCTTCCACATCAATGTTATAACGGTCAAGCGATGTGGACATATGTGGGTCCTATGATTTGCTTTCATCTCGTTGAGAAGCATCAAGCAGATCGTGTATTGCGACAGTTCCATATGCTACAAATGCCACCAGAGTTTTGCTCCACAGATCAGGGCCTACACCAAATTGATTTAAGAGGCAAGCACGATCAAGATTGGAGTAGGATTCATGCAGAGCATATAGCAATGTGGCATTCACGAAATAATTTTTGTGCCGAAGCAGAAGCAACACAGAAGCCGACAGTATCAGATAACTACTTTTCCTGGTACATGTCGATTACCCGACGCTTCATGACACCTGATGGCGCTTACTGTTATCGCATGAATAATTTTGTTGAAGACGTA

Protein sequence

MLITYRMFFGRLINSQINWTPYTSHIMALLPHQCYNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMWHSRNNFCAEAEATQKPTVSDNYFSWYMSITRRFMTPDGAYCYRMNNFVEDV

Homology

[Close]

BLAST of Cucsat.G15734 vs. ExPASy Swiss-Prot
Match: Q9LNG5 (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 7.3e-27
Identity = 57/138 (41.30%), Postives = 80/138 (57.97%), Query Frame = 0


Query: 5   YRMFFGRLINSQINWTPYTSHIMALLPHQCYNGQAMWTYVGPMICFHLVEKHQADRVLRQ 64
           YR  F +  + Q+ W PYT  ++A +P  C +G+ +W  V P+ICF +VE H+ DRVLRQ
Sbjct: 307 YRDQFDQQKDEQVIWQPYTPDLLAKIPLICVSGENIWRTVAPLICFDVVEWHRPDRVLRQ 366

Query: 65  FHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMWHSRNNFCAEAEATQKP-TV 124
           F + Q  P  C  ++ LH ID RGK + DWS  H+ HI +W +R +     E    P   
Sbjct: 367 FGLHQTIPAPCDNEKALHAIDKRGKSEYDWSARHSRHIGLWEARVSSVVSGEPECSPMDY 426

Query: 125 SDNYFSWYMSITRRFMTP 142
           +D Y  WY  ITRR ++P
Sbjct: 427 NDPYMEWYRRITRRIISP 444

[Close]

BLAST of Cucsat.G15734 vs. NCBI nr
Match: KAE8646947.1 (hypothetical protein Csa_020816 [Cucumis sativus])

HSP 1 Score: 333 bits (853), Expect = 2.33e-113
Identity = 152/156 (97.44%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MLITYRMFFGRLINSQINWTPYTSHIMALLPHQCYNGQAMWTYVGPMICFHLVEKHQADR 60
           MLITYRMFF RLINSQINWTPYTSHIMALL HQC+NGQAMWTYVGPMICFHLVEKHQADR
Sbjct: 73  MLITYRMFFDRLINSQINWTPYTSHIMALLQHQCHNGQAMWTYVGPMICFHLVEKHQADR 132

Query: 61  VLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMWHSRNNFCAEAEATQK 120
           VLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMWHSRNNFCAEAEATQK
Sbjct: 133 VLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMWHSRNNFCAEAEATQK 192

Query: 121 PTVSDNYFSWYMSITRRFMTPDGAYCYRMNNFVEDV 156
           PTVSDNYFSWY SITRRFMTPDGAYCYRMNNFVEDV
Sbjct: 193 PTVSDNYFSWYTSITRRFMTPDGAYCYRMNNFVEDV 228

[Close]

BLAST of Cucsat.G15734 vs. NCBI nr
Match: KGN65336.2 (hypothetical protein Csa_017779 [Cucumis sativus])

HSP 1 Score: 323 bits (829), Expect = 4.85e-111
Identity = 149/156 (95.51%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 1   MLITYRMFFGRLINSQINWTPYTSHIMALLPHQCYNGQAMWTYVGPMICFHLVEKHQADR 60
           MLITYRMFF RLINSQINWTPYTSHIMALLP QC+NGQAMWTYVGPMICFHLVEKHQADR
Sbjct: 1   MLITYRMFFDRLINSQINWTPYTSHIMALLPRQCHNGQAMWTYVGPMICFHLVEKHQADR 60

Query: 61  VLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMWHSRNNFCAEAEATQK 120
           VLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMWHSRNNFCAEAEATQK
Sbjct: 61  VLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMWHSRNNFCAEAEATQK 120

Query: 121 PTVSDNYFSWYMSITRRFMTPDGAYCYRMNNFVEDV 156
            TVSDNYF WY SITRRFMTPDGAYCY MNNFVEDV
Sbjct: 121 LTVSDNYFFWYTSITRRFMTPDGAYCYCMNNFVEDV 156

[Close]

BLAST of Cucsat.G15734 vs. NCBI nr
Match: XP_031739461.1 (serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus])

HSP 1 Score: 323 bits (829), Expect = 6.14e-109
Identity = 149/156 (95.51%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 1   MLITYRMFFGRLINSQINWTPYTSHIMALLPHQCYNGQAMWTYVGPMICFHLVEKHQADR 60
           MLITYRMFF RLINSQINWTPYTSHIMALLP QC+NGQAMWTYVGPMICFHLVEKHQADR
Sbjct: 143 MLITYRMFFDRLINSQINWTPYTSHIMALLPRQCHNGQAMWTYVGPMICFHLVEKHQADR 202

Query: 61  VLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMWHSRNNFCAEAEATQK 120
           VLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMWHSRNNFCAEAEATQK
Sbjct: 203 VLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMWHSRNNFCAEAEATQK 262

Query: 121 PTVSDNYFSWYMSITRRFMTPDGAYCYRMNNFVEDV 156
            TVSDNYF WY SITRRFMTPDGAYCY MNNFVEDV
Sbjct: 263 LTVSDNYFFWYTSITRRFMTPDGAYCYCMNNFVEDV 298

[Close]

BLAST of Cucsat.G15734 vs. NCBI nr
Match: XP_031739640.1 (serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus])

HSP 1 Score: 318 bits (815), Expect = 1.19e-108
Identity = 146/156 (93.59%), Postives = 148/156 (94.87%), Query Frame = 0


Query: 1   MLITYRMFFGRLINSQINWTPYTSHIMALLPHQCYNGQAMWTYVGPMICFHLVEKHQADR 60
           MLITYRMFF RLINSQINWTPYTSHIM LLPHQC++GQAMWTYVGPMICFHLVEKHQADR
Sbjct: 1   MLITYRMFFDRLINSQINWTPYTSHIMTLLPHQCHSGQAMWTYVGPMICFHLVEKHQADR 60

Query: 61  VLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMWHSRNNFCAEAEATQK 120
           VLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAM HSRNNFC E EATQK
Sbjct: 61  VLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMCHSRNNFCVEVEATQK 120

Query: 121 PTVSDNYFSWYMSITRRFMTPDGAYCYRMNNFVEDV 156
           PTVSDNYFSWY SITR FMTPDGAY YRMNNFVEDV
Sbjct: 121 PTVSDNYFSWYTSITRHFMTPDGAYYYRMNNFVEDV 156

[Close]

BLAST of Cucsat.G15734 vs. NCBI nr
Match: XP_031736092.1 (serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus])

HSP 1 Score: 284 bits (727), Expect = 3.39e-96
Identity = 131/149 (87.92%), Postives = 137/149 (91.95%), Query Frame = 0


Query: 1   MLITYRMFFGRLINSQINWTPYTSHIMALLPHQCYNGQAMWTYVGPMICFHLVEKHQADR 60
           MLITYRMFF RLIN QINWTPYT +IM LL HQC+N QAMWTYVGPMICF LVEKHQADR
Sbjct: 1   MLITYRMFFDRLINFQINWTPYTPYIMTLLSHQCHNSQAMWTYVGPMICFQLVEKHQADR 60

Query: 61  VLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMWHSRNNFCAEAEATQK 120
           VLRQFHMLQMP EFCST QGLHQIDLRGKHDQDWSRIHA+HIAMWHS+N FCAEAEATQK
Sbjct: 61  VLRQFHMLQMPQEFCSTYQGLHQIDLRGKHDQDWSRIHAKHIAMWHSQNIFCAEAEATQK 120

Query: 121 PTVSDNYFSWYMSITRRFMTPDGAYCYRM 149
           PTVS+NYFSWY SITRRFMT DGAYCYR+
Sbjct: 121 PTVSNNYFSWYTSITRRFMTLDGAYCYRI 149

[Close]

BLAST of Cucsat.G15734 vs. ExPASy TrEMBL
Match: A0A1S3CBQ7 (serine/threonine-protein phosphatase 7 long form homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498663 PE=4 SV=1)

HSP 1 Score: 241 bits (616), Expect = 4.64e-75
Identity = 106/156 (67.95%), Postives = 126/156 (80.77%), Query Frame = 0


Query: 1   MLITYRMFFGRLINSQINWTPYTSHIMALLPHQCYNGQAMWTYVGPMICFHLVEKHQADR 60
           ML+TYR  F RL ++QINWTPYTS +M LLP +C+NGQ +WTYVGP+ICFH+VE H  DR
Sbjct: 281 MLLTYRQIFDRLTHTQINWTPYTSDVMTLLPDRCHNGQLIWTYVGPLICFHIVELHAPDR 340

Query: 61  VLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMWHSRNNFCAEAEATQK 120
           VLRQF M Q  P FC+T+  LH+IDLRGKHDQDW +IH E+I  WHSRN FC +  AT +
Sbjct: 341 VLRQFGMHQPLPSFCNTNPALHRIDLRGKHDQDWCKIHVEYITKWHSRNEFCVKGVATNE 400

Query: 121 PTVSDNYFSWYMSITRRFMTPDGAYCYRMNNFVEDV 156
           PTVSD+YFSWY SITRRF+T DGAY YR+NNFV+DV
Sbjct: 401 PTVSDDYFSWYSSITRRFITTDGAYYYRVNNFVQDV 436

[Close]

BLAST of Cucsat.G15734 vs. ExPASy TrEMBL
Match: A0A1S4E383 (serine/threonine-protein phosphatase 7 long form homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498663 PE=4 SV=1)

HSP 1 Score: 241 bits (616), Expect = 7.20e-75
Identity = 106/156 (67.95%), Postives = 126/156 (80.77%), Query Frame = 0


Query: 1   MLITYRMFFGRLINSQINWTPYTSHIMALLPHQCYNGQAMWTYVGPMICFHLVEKHQADR 60
           ML+TYR  F RL ++QINWTPYTS +M LLP +C+NGQ +WTYVGP+ICFH+VE H  DR
Sbjct: 299 MLLTYRQIFDRLTHTQINWTPYTSDVMTLLPDRCHNGQLIWTYVGPLICFHIVELHAPDR 358

Query: 61  VLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMWHSRNNFCAEAEATQK 120
           VLRQF M Q  P FC+T+  LH+IDLRGKHDQDW +IH E+I  WHSRN FC +  AT +
Sbjct: 359 VLRQFGMHQPLPSFCNTNPALHRIDLRGKHDQDWCKIHVEYITKWHSRNEFCVKGVATNE 418

Query: 121 PTVSDNYFSWYMSITRRFMTPDGAYCYRMNNFVEDV 156
           PTVSD+YFSWY SITRRF+T DGAY YR+NNFV+DV
Sbjct: 419 PTVSDDYFSWYSSITRRFITTDGAYYYRVNNFVQDV 454

[Close]

BLAST of Cucsat.G15734 vs. ExPASy TrEMBL
Match: A0A5A7TPE7 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G003010 PE=4 SV=1)

HSP 1 Score: 229 bits (584), Expect = 7.15e-73
Identity = 106/156 (67.95%), Postives = 125/156 (80.13%), Query Frame = 0


Query: 1   MLITYRMFFGRLINSQINWTPYTSHIMALLPHQCYNGQAMWTYVGPMICFHLVEKHQADR 60
           ML+ YR  F RL  SQINWTPYT  IMA LP +C +GQA+WTYVGP+ICFHLVEKHQ DR
Sbjct: 69  MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDR 128

Query: 61  VLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMWHSRNNFCAEAEATQK 120
           VLRQF+MLQMPP    TDQ LHQIDLRGKHDQDW +IHAEHI +W+SR +F  EA  T +
Sbjct: 129 VLRQFNMLQMPPAISYTDQRLHQIDLRGKHDQDWRQIHAEHIGVWNSRYDFRVEASTTSE 188

Query: 121 PTVSDNYFSWYMSITRRFMTPDGAYCYRMNNFVEDV 156
           PTVS+NYF WY SITRRF+T +GA+ + M +FV++V
Sbjct: 189 PTVSENYFVWYRSITRRFITQEGAFYHCMYDFVDEV 224

[Close]

BLAST of Cucsat.G15734 vs. ExPASy TrEMBL
Match: A0A5A7TD03 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G00890 PE=4 SV=1)

HSP 1 Score: 232 bits (591), Expect = 8.94e-72
Identity = 102/150 (68.00%), Postives = 121/150 (80.67%), Query Frame = 0


Query: 1   MLITYRMFFGRLINSQINWTPYTSHIMALLPHQCYNGQAMWTYVGPMICFHLVEKHQADR 60
           ML+TYR  F RL ++QINWTPYTS +MALLP +C+NGQ +WTYVGP+ICFH+VE H  DR
Sbjct: 281 MLLTYRQIFDRLTHTQINWTPYTSDVMALLPDRCHNGQLIWTYVGPLICFHIVELHAPDR 340

Query: 61  VLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMWHSRNNFCAEAEATQK 120
           VLRQF M Q  P FC+T+  LH+IDLRGKHDQDW +IH E+I  WHSRN FC +  AT +
Sbjct: 341 VLRQFGMHQPLPSFCNTNPALHRIDLRGKHDQDWCKIHVEYITKWHSRNEFCVKGVATNE 400

Query: 121 PTVSDNYFSWYMSITRRFMTPDGAYCYRMN 150
           PTVSD+YFSWY SITRRF+T DGAY YR+N
Sbjct: 401 PTVSDDYFSWYSSITRRFITTDGAYYYRVN 430

[Close]

BLAST of Cucsat.G15734 vs. ExPASy TrEMBL
Match: A0A5D3BQW5 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00920 PE=4 SV=1)

HSP 1 Score: 228 bits (581), Expect = 1.97e-70
Identity = 106/156 (67.95%), Postives = 124/156 (79.49%), Query Frame = 0


Query: 1   MLITYRMFFGRLINSQINWTPYTSHIMALLPHQCYNGQAMWTYVGPMICFHLVEKHQADR 60
           ML+ YR  F RL  SQINWTPYT  IMA LP +C +GQA+WTYVGP+ICFHLVEKHQ DR
Sbjct: 230 MLLIYRWTFDRLSRSQINWTPYTPDIMASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDR 289

Query: 61  VLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMWHSRNNFCAEAEATQK 120
           VLRQF+MLQ PP    TDQ LHQIDLRGKHDQDW RIHAEHI +W+SR +F  EA  T +
Sbjct: 290 VLRQFNMLQTPPAISYTDQRLHQIDLRGKHDQDWRRIHAEHIGVWNSRYDFRVEAPTTSE 349

Query: 121 PTVSDNYFSWYMSITRRFMTPDGAYCYRMNNFVEDV 156
           PTVS+NYF WY SITRRF+T +GA+ + M +FV++V
Sbjct: 350 PTVSENYFVWYRSITRRFITQEGAFYHCMYDFVDEV 385

The following BLAST results are available for this feature:

BLAST of Cucsat.G15734 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LNG5	7.3e-27	41.30	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana...	[more]

BLAST of Cucsat.G15734 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646947.1	2.33e-113	97.44	hypothetical protein Csa_020816 [Cucumis sativus]	[more]
KGN65336.2	4.85e-111	95.51	hypothetical protein Csa_017779 [Cucumis sativus]	[more]
XP_031739461.1	6.14e-109	95.51	serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus]	[more]
XP_031739640.1	1.19e-108	93.59	serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus]	[more]
XP_031736092.1	3.39e-96	87.92	serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus]	[more]

BLAST of Cucsat.G15734 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CBQ7	4.64e-75	67.95	serine/threonine-protein phosphatase 7 long form homolog isoform X2 OS=Cucumis m...	[more]
A0A1S4E383	7.20e-75	67.95	serine/threonine-protein phosphatase 7 long form homolog isoform X1 OS=Cucumis m...	[more]
A0A5A7TPE7	7.15e-73	67.95	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5A7TD03	8.94e-72	68.00	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5D3BQW5	1.97e-70	67.95	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019557	Aminotransferase-like, plant mobile domain	PFAM	PF10536	PMD	coord: 4..131 e-value: 6.6E-15 score: 55.1
IPR044824	Protein MAINTENANCE OF MERISTEMS-like	PANTHER	PTHR46033	PROTEIN MAIN-LIKE 2	coord: 8..134
None	No IPR available	PANTHER	PTHR46033:SF8	SERINE/THREONINE-PROTEIN PHOSPHATASE 7 LONG FORM HOMOLOG ISOFORM X1	coord: 8..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G15734.T1	Cucsat.G15734.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010073	meristem maintenance
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0048507	meristem development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity