Cucsat.G15699 (gene) Cucumber (B10) v3

Overview
NameCucsat.G15699
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Locationctg2009: 6084293 .. 6088594 (+)
RNA-Seq ExpressionCucsat.G15699
SyntenyCucsat.G15699
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAGCTGAAGGGGTTAATGTGATCATGGTGGTAGTTGACCGGCTGAGTAAGTATTCTTACTTTATATCAATGAGACATCCGTTTTCAGCTAAGCACGTTGCCTCCATATTCATCGACAGAATAGTAAGCAAGCACGACATTCCTAAGTCGATTATCACAGACCGGGATAAAATCTTTCTTAGTAATTTTTGGAAAGAACTGTTTGCAACTATGGGGACTATTCTAAAGAGGAGTATGGTGCTTCACCCACAAACTGATGGGCAGACAGAAAGGGTAAATAGATGTCTTGAAACTTATCTGAGATGCTTCTGTAATGAACAACCAAAAAAATGGGATAGACTGATTCCATGGGCAGAATTGTGGTATAATACCACATTCCATGCATCCACCAAAGTGACCCCTTTTCAGACGGTATACGGTAGACCGCCTCCTCCCCTGTTATCCTATGGTTACAAGAAAACTCCTAATAATGAGGTTGACACACTGCTGAAAGAACGTGACTTAGCCATCAATGCCTTAAAGGAAAACCTGTGTGTAGCCCAGAACAGGATGAAGAAAATGGCTGATCGAAATAGAAGAGAGTTAAAATTTAAGGTAGGAGATGAAGTCTACTTGAAATTGAGACTTTACCGGCAACGCTCCTTAGCTCGGAAGAAGTGTGAGAAGTTAGCACCTAAATATTACGGACCCTACAAACTTATTGAAGAAATAGGAGCAGTTGCGTACAGATTGATGTTACCCCTGGAAGCCAGTATCCACAATGTGTTCCATATTTCTCAGTTAAAACTAAAACTAGGTAATCAACAAGCTGTTCAACACCAGCAACCTATGCTAACGGAAGAGTTTGAGTTACAATTATGGCTAGAAATAGTGTTGGGAGTCCGTTGGAATCAGGAATTGGGAGGAAATGAATGGTTAATCAAATGGAAAGGGCTGCCGGACAGTGAAGCAACTTGGGAATCTGTTTTCCAAATGAACCAACAATTCCCTGACTTTCACGTTGAGGACAAGGTGAACCTGGAACCGAGGGGTATTGTAAGGCCCCCTATTATCCATACATACAAAAGGAGGGGTAAAAACGTAAAAGCTCACGCAGCATAAAAGGGGAGAATATTAGGAAAAGAACATGAGAGTGGGGCCCACGGGGAGGAATGAGAAAAGAGCTACAAATAAGACTTATCGGGATTGGGGGCTAGGTTAACTTTTTGTCTTCATTGGGTCTGTAGAGGCTGCTAGGTCTAGGAAAGAATACTATCCTTTCCTAGGGAGGTTTGACATGATATTATCATCACGTCAGAAAGCCTCTTAGATGGACCTTCCTTTCAAGCTTCGCCCGCAACCGTTCCTCTCAATGTAATTGTCCTCATCGGAAAGTTGGTATTGCCTTTATTATCATTGTTACTCGTAGCCATATTACACTTGGCACTAGTCGAAGGATATATGGGAAGTTTCCCTCCAGAATATCCCGAAAGATTTGCCTCCTTTCTTATAACTTCTCGATTCTCCACCATTTGCACCAACCTCATCATCTATGATCATCCTACTGGTTCACAAAACTCCACTTTGGCCTTTATCCACGGAAGTAATCCTCCCATAAATGTTTCCTCAACTACTTTCTCCTCTAAATTTGATAATGGTGCCACCAATTCATCAAATAGATTCCTATACTCTTCTACAATGGATTCTTGTTTAATTTTAAAAAATCGGCCACAAACCGTTCCCTCTCGAATTGATCGAAACCGTATTAACAACCTTTCTTTCAAATTCGACTAGTTGGTAAATTTTTCCCTCTCTTCTTGAGATCGATACCTATTTAAGGCTGGGCCTTTGAAGCTAATAGTTGCTACAATCAATTTTTCGAAATCCGTAAGCTTTCTTGGTGGTTGTTCAATGAACTGTGAATTCCCTTCAAAGAATATTCAACGTACATCAAGCATATTGTTGTATTTCTTGGAGAGAGGGTTCTTGCACCTGAGCATTTCCTCTGATCGGGTGGGTAACTCTTCTTCCCACCATTCTAGTATTCCTCGCTTTGTTACCAATTTGGTGTACAAACCAAAACTCTAATTTTGAATCAAAATGAATCTCTTCCTCTAAATGAGGAGAGAGGACTTTATTTATAGTCAAATTGGTACAAACTAGTAAAATAACAACCAACTAACTAACTATTTTAACTTGCTCTTAATTCCTGTACAAAGAGCTTCTCTCAGTACTGAGTTCACTATTAAGCCGATGGATTATTCCATAAATTACTCACTAATACTTCTTTCTTCTATGTGATAGGTGATAGCAAACTTGGAGGCAAAATTGTCTTTTAGACTAATTCCAACCATATCAGACTAAATCCGTATGCCATCTCCTTTCCTCACCTTGCTGATGATGTGGTCATAGACTGTTTCTTTATCCTTCTCAATGTATTTTCAGGGTCCCTTTGAGATTAATGTAGTTGCTCCCACTGGCCAAAAGGGCAGGCGCCATATTTCAAGGCAATCAACTTCCTCCAAAGGGCTGAGTTTTACTTATGAAATCTCCAAACCATCGACAAGGAAATATTTTTCTGTTCTAGATTTGTAATCTACTTCCATTAGAGCCTGGTTTTCTTCTCATTCAAGATTGTGTGTACCTCCCTTCTCTTTGTTGCCCTTCTACTCAAGAAGTTTCAAAATAGCCTCCCAATGGAAGCCGAAATCTTTGTGGTTGTAGGAAAAAGGGATAAATAATAAATCGGTTGGTTGGCTTAGATTGCTTGAGAGTAATGTGACCCCTTTTAGAAATCTGTATGTCTCCAAGGATTAAACTGGACCCATGGCAGCAATGCAGGATTTTCAGAGCCTGTAGATGTGTGGGAGCAGATTGATGCATGTGGTAGAGAGGGGGATGTTTGCTAGGAATGGGGGAAAGTACACCAAGCTTGGTAAGAGGGTTAGGTACTGCACTGATACAATTGCCTTTGCGCAGCTCTGTGGCACAGTTTTGATGGAGCTGGTGCAGTTTGTGTGGGGGAATAGCTATTGGATTTGGGCAAGTCATAAAGGCAAAGCCACTTCTTTGGGAGTGCGCGCATGTGTTAGAACTCCAACAAGATTTGTGGTATTTTGCGTTGGGTCCACTACAAAAAATGGGTTGATTTGTACTACCAAAGGACGAAGTAAAAGACAGCAAGGTTGATCCTAGAGTCTCCCAAGGATCGAGCCGACATGTGTTATCTTGTATACTTCAAAATTTTGGAAAGGTTGCCTGTCATAAAATTTGTTGAAAATGGGTGTACATTATATTTGTAGCTTTGGTACTTATTTGTAGATACGCTCTGTTCTTTCGTCACAAGTTGGTTAGGACTATAACTTGCTTTAGAAGTTGATTTTACTGAATGTTGTCATGTGTTATTATACTCGTGATTGTGAATATGGTTTTTTTCTTTTTCCTATTCACTGTTTACTATGTTGCAGTTCACTGAATGCTTCACTTTCAGGTAGAGGTTAAATTTGCAGATGGAAGTGTGTTCAACTTGTCAGCTGAGTTCTTGAGAGTATATAGTCCAGCTGCTGATGCTAAAATCCGGTCAATTGGGGGTGAAAAGGTACTATAGAAACAATTTTTTGTTTCATTTCTATCTAAAAATTTGAACAATCCCTTAAGGGGTGTTTAAATAGCCAAATTGGAATGGTGGGATGATTTGTAAGAGCGGTACTTTTTGAGTGACACTCCCTTTTAATATTTGTGGAAAACTATCTAATTCAACGAAGTATAGTTTCCAAGAAAACTGGATAGATGGATGCTACGTTTTGGACTAATTCTCTTTGAGCCCTTTACATTATGCATTTGGTCTCGACAACAACTAAGGCAATCCACGATAGACTGCTTTTATAAGTACCATTCTGAAAGACATACCGCATGCCCAATACGTTCTACAACTTCTACAGCATTAAATATTGCAATGCCAAACTAATCTCATTAAGTTTATTTCTTAAAAAAAAAAAGAGGTTTATGTGTAAGTTGGTTCAAACATCCACACAAGGGTTTGACCAACCGCTGATTTTGTAGAATTTTATGTTTAGCCTAATTCGCACAACCCAATGCATCTACTGATTTTTTAATATCATATGGAGTATTGTCTGCTTTTTTCTTTTATCAGATTCAATTACTAAATGCATGTTCGAAACCAGGTAATCTCTGGACGACGTCATGTAGGTATTATGTCTGCTGAACCAGTTGGGAACTATGGGGTAAGGTACTTATCACTCATTAATATATGTCTCTGAATTTTACCAATCTTTTGGTATTGACTCGTGGAAGAATTGAAATCTTAGATCAAAACATAAAGTATGGATGGTATGAACTGCCTTTTCTTGAATCCTTACATATCTGTTGCAATTTTCTAGGATCCTTTTTGACGATTTGCATAGAACTGGGATTTATTCGTGGGATTATTTCTTTCATCTTGGGAGCAACAAATTCACTCTCTTGAGAAATTATGTTAAAACACTGAAGAAGCATGGGCTGAGCCGAGATCCACCAAAGAGAAAATGATGGACAAATCAACTGTCTCCAACCACGAACATCACGAACATCGTATGCAAGATAATCATTGAGTGTTTGGGTCAACTGACAAACTCCTTGAAGAAATCATGCAACAATTAGATTGGTTTGAAAAAATAAGGCAAGCTGTCTCAGTACTGGCTGATGAAAAAGATTCAACTGTTATACTAGGCAACGAAAAGAATTTTCTTAGTTTTCTGTTTCAAATTTTACCTATAAGCTATATGCTTCTAAGAACCTGAGCGTGAAAAATAGACATGTTGCTATAGCTCCTTGCTAGATTATCTAATGAATCGTGTTAAATTATCATTTCAACGGTTTCATTATGCCCATGAAATATTTTGTTGTCTTTATCACTAGCATTGCTCATTATGATGATGTGCATGATTATACGATAAGGTGGATAAATGATTGGAAGAAGCTAGTATATAAAATAAATGATTGTAAGAAGCGTTAACAGTTAAAAGGAAGTTGGGGTTATTAAATTAGTT

Coding sequence (CDS)

CTAGCTGAAGGGGTTAATGTGATCATGGTGGTAGTTGACCGGCTGAGTAAGTATTCTTACTTTATATCAATGAGACATCCGTTTTCAGCTAAGCACGTTGCCTCCATATTCATCGACAGAATAGTAAGCAAGCACGACATTCCTAAGTCGATTATCACAGACCGGGATAAAATCTTTCTTAGTAATTTTTGGAAAGAACTGTTTGCAACTATGGGGACTATTCTAAAGAGGAGTATGGTGCTTCACCCACAAACTGATGGGCAGACAGAAAGGGTAAATAGATGTCTTGAAACTTATCTGAGATGCTTCTGTAATGAACAACCAAAAAAATGGGATAGACTGATTCCATGGGCAGAATTGTGGTATAATACCACATTCCATGCATCCACCAAAGTGACCCCTTTTCAGACGGTATACGGTAGACCGCCTCCTCCCCTGTTATCCTATGGTTACAAGAAAACTCCTAATAATGAGGTTGACACACTGCTGAAAGAACGTGACTTAGCCATCAATGCCTTAAAGGAAAACCTGTGTGTAGCCCAGAACAGGATGAAGAAAATGGCTGATCGAAATAGAAGAGAGTTAAAATTTAAGGTAGGAGATGAAGTCTACTTGAAATTGAGACTTTACCGGCAACGCTCCTTAGCTCGGAAGAAGTGTGAGAAGTTAGCACCTAAATATTACGGACCCTACAAACTTATTGAAGAAATAGGAGCAGTTGCGTACAGATTGATGTTACCCCTGGAAGCCAGTATCCACAATGTGTTCCATATTTCTCAGTTAAAACTAAAACTAGGTAATCAACAAGCTGTTCAACACCAGCAACCTATGCTAACGGAAGAGTTTGAGTTACAATTATGGCTAGAAATAGTGTTGGGAGTCCGTTGGAATCAGGAATTGGGAGGAAATGAATGGTTAATCAAATGGAAAGGGCTGCCGGACAGTGAAGCAACTTGGGAATCTGTTTTCCAAATGAACCAACAATTCCCTGACTTTCACGTTGAGGACAAGGTGAACCTGGAACCGAGGGGTATTGTAAGGCCCCCTATTATCCATACATACAAAAGGAGGGGTAAAAACGTAAAAGCTCACGCAGCATAA

Protein sequence

LAEGVNVIMVVVDRLSKYSYFISMRHPFSAKHVASIFIDRIVSKHDIPKSIITDRDKIFLSNFWKELFATMGTILKRSMVLHPQTDGQTERVNRCLETYLRCFCNEQPKKWDRLIPWAELWYNTTFHASTKVTPFQTVYGRPPPPLLSYGYKKTPNNEVDTLLKERDLAINALKENLCVAQNRMKKMADRNRRELKFKVGDEVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQLKLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWESVFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNVKAHAA
Homology
[Close]
BLAST of Cucsat.G15699 vs. NCBI nr
Match: XP_031737236.1 (uncharacterized protein LOC116402184 [Cucumis sativus] >XP_031744846.1 uncharacterized protein LOC116405175 [Cucumis sativus] >XP_031745413.1 uncharacterized protein LOC116405619 [Cucumis sativus])

HSP 1 Score: 318 bits (815), Expect = 9.54e-109
Identity = 154/165 (93.33%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   EVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQL 60
           EVYLKLR YRQRSLARKKCEKLAPKYYGPYK+ EEIGAVAYRLMLP EASIHNVFHISQL
Sbjct: 19  EVYLKLRPYRQRSLARKKCEKLAPKYYGPYKITEEIGAVAYRLMLPPEASIHNVFHISQL 78

Query: 61  KLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWES 120
           KLKLG+QQAVQHQQP LTEEFELQLW E VLGVRWN+ELGGNEWLIKWKGLPDSE TWES
Sbjct: 79  KLKLGSQQAVQHQQPRLTEEFELQLWPETVLGVRWNRELGGNEWLIKWKGLPDSETTWES 138

Query: 121 VFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNVKAHAA 165
           VFQMNQQFPDFH+EDKVNLEPRGIVRPPIIHTYKRRGKNVKAHAA
Sbjct: 139 VFQMNQQFPDFHLEDKVNLEPRGIVRPPIIHTYKRRGKNVKAHAA 183

[Close]
BLAST of Cucsat.G15699 vs. NCBI nr
Match: XP_031745420.1 (uncharacterized protein LOC116405633 [Cucumis sativus])

HSP 1 Score: 317 bits (813), Expect = 4.92e-108
Identity = 153/165 (92.73%), Postives = 158/165 (95.76%), Query Frame = 0 

Query: 1   EVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQL 60
           EVYLKLR YRQRSLARKKCEKLAPKYYGPYK+ EEIGAVAYRLMLP EASIHNVFHISQL
Sbjct: 19  EVYLKLRPYRQRSLARKKCEKLAPKYYGPYKITEEIGAVAYRLMLPPEASIHNVFHISQL 78

Query: 61  KLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWES 120
           KLKLG+QQAVQHQQP LTEEFELQLW E VLGVRWN+ELGGNEWL+KWKGLPDSE TWES
Sbjct: 79  KLKLGSQQAVQHQQPRLTEEFELQLWPETVLGVRWNRELGGNEWLLKWKGLPDSETTWES 138

Query: 121 VFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNVKAHAA 165
           VFQMNQQFPDFH+EDKVNLEPRGIVRPPIIHTYKRRGKNVKAHAA
Sbjct: 139 VFQMNQQFPDFHLEDKVNLEPRGIVRPPIIHTYKRRGKNVKAHAA 183

[Close]
BLAST of Cucsat.G15699 vs. NCBI nr
Match: TYK29412.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 280 bits (716), Expect = 7.43e-94
Identity = 133/163 (81.60%), Postives = 147/163 (90.18%), Query Frame = 0 

Query: 1   EVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQL 60
           EVYLKLR YRQRSLARKK EKLAP++YGPYK+IEEIGAVAYRL LP EA+IHNVFHISQL
Sbjct: 16  EVYLKLRPYRQRSLARKKSEKLAPRFYGPYKIIEEIGAVAYRLELPPEAAIHNVFHISQL 75

Query: 61  KLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWES 120
           K KLGNQQ VQ Q PMLTE+FELQLW E VLG+RW++ELG NEWLIKW+GLP+SEATWES
Sbjct: 76  KPKLGNQQVVQRQHPMLTEDFELQLWPETVLGIRWSKELGANEWLIKWQGLPESEATWES 135

Query: 121 VFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNVKAH 163
            +QMNQQFP FH+EDKVN+EPRGIVRPPIIHTYKRRG+ V  H
Sbjct: 136 TYQMNQQFPSFHLEDKVNVEPRGIVRPPIIHTYKRRGRMVNKH 178

[Close]
BLAST of Cucsat.G15699 vs. NCBI nr
Match: KAA0044281.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 273 bits (698), Expect = 4.10e-91
Identity = 131/163 (80.37%), Postives = 145/163 (88.96%), Query Frame = 0 

Query: 1   EVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQL 60
           EVYLKLR  RQRSLARK+ EKLAP++YGPYK+IEEIGAVAYRL LP EA+IHNVFHISQL
Sbjct: 16  EVYLKLRPCRQRSLARKRSEKLAPRFYGPYKIIEEIGAVAYRLELPPEAAIHNVFHISQL 75

Query: 61  KLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWES 120
           K KLGNQQ VQ Q PMLTE+FELQLW E VLG+RW++ELG NEWLIKW+GLP SEATWES
Sbjct: 76  KPKLGNQQVVQCQHPMLTEDFELQLWPETVLGIRWSKELGANEWLIKWQGLPGSEATWES 135

Query: 121 VFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNVKAH 163
            +QMNQQFP FH+EDKVN+EPRGIVRPPIIHTYKRRG+ V  H
Sbjct: 136 TYQMNQQFPSFHLEDKVNVEPRGIVRPPIIHTYKRRGRMVNKH 178

[Close]
BLAST of Cucsat.G15699 vs. NCBI nr
Match: KAA0040538.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa])

HSP 1 Score: 275 bits (702), Expect = 5.91e-89
Identity = 131/160 (81.88%), Postives = 144/160 (90.00%), Query Frame = 0 

Query: 1   EVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQL 60
           EVYLKL+ YRQRSLARKK EKLAP+YYGPYK+IEEIGAVAYRL LP EA+IHNVFHISQL
Sbjct: 213 EVYLKLKPYRQRSLARKKSEKLAPRYYGPYKIIEEIGAVAYRLDLPPEAAIHNVFHISQL 272

Query: 61  KLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWES 120
           K KLG QQ VQHQ PMLTE FELQLW E VLG+RWN+ELG NEWLIKW+GLP+S+ATWES
Sbjct: 273 KPKLGAQQVVQHQHPMLTENFELQLWPENVLGIRWNKELGANEWLIKWQGLPESDATWES 332

Query: 121 VFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNV 160
           V+QMNQQFP FH+EDKVN+EPRGIVRPPI+HTYKRR   V
Sbjct: 333 VYQMNQQFPSFHLEDKVNVEPRGIVRPPILHTYKRRDSKV 372

[Close]
BLAST of Cucsat.G15699 vs. ExPASy TrEMBL
Match: A0A5D3E0H6 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00020 PE=4 SV=1)

HSP 1 Score: 280 bits (716), Expect = 3.60e-94
Identity = 133/163 (81.60%), Postives = 147/163 (90.18%), Query Frame = 0 

Query: 1   EVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQL 60
           EVYLKLR YRQRSLARKK EKLAP++YGPYK+IEEIGAVAYRL LP EA+IHNVFHISQL
Sbjct: 16  EVYLKLRPYRQRSLARKKSEKLAPRFYGPYKIIEEIGAVAYRLELPPEAAIHNVFHISQL 75

Query: 61  KLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWES 120
           K KLGNQQ VQ Q PMLTE+FELQLW E VLG+RW++ELG NEWLIKW+GLP+SEATWES
Sbjct: 76  KPKLGNQQVVQRQHPMLTEDFELQLWPETVLGIRWSKELGANEWLIKWQGLPESEATWES 135

Query: 121 VFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNVKAH 163
            +QMNQQFP FH+EDKVN+EPRGIVRPPIIHTYKRRG+ V  H
Sbjct: 136 TYQMNQQFPSFHLEDKVNVEPRGIVRPPIIHTYKRRGRMVNKH 178

[Close]
BLAST of Cucsat.G15699 vs. ExPASy TrEMBL
Match: A0A5A7TRS1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00020 PE=4 SV=1)

HSP 1 Score: 273 bits (698), Expect = 1.99e-91
Identity = 131/163 (80.37%), Postives = 145/163 (88.96%), Query Frame = 0 

Query: 1   EVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQL 60
           EVYLKLR  RQRSLARK+ EKLAP++YGPYK+IEEIGAVAYRL LP EA+IHNVFHISQL
Sbjct: 16  EVYLKLRPCRQRSLARKRSEKLAPRFYGPYKIIEEIGAVAYRLELPPEAAIHNVFHISQL 75

Query: 61  KLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWES 120
           K KLGNQQ VQ Q PMLTE+FELQLW E VLG+RW++ELG NEWLIKW+GLP SEATWES
Sbjct: 76  KPKLGNQQVVQCQHPMLTEDFELQLWPETVLGIRWSKELGANEWLIKWQGLPGSEATWES 135

Query: 121 VFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNVKAH 163
            +QMNQQFP FH+EDKVN+EPRGIVRPPIIHTYKRRG+ V  H
Sbjct: 136 TYQMNQQFPSFHLEDKVNVEPRGIVRPPIIHTYKRRGRMVNKH 178

[Close]
BLAST of Cucsat.G15699 vs. ExPASy TrEMBL
Match: A0A5A7TCB1 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G00920 PE=4 SV=1)

HSP 1 Score: 275 bits (702), Expect = 2.86e-89
Identity = 131/160 (81.88%), Postives = 144/160 (90.00%), Query Frame = 0 

Query: 1   EVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQL 60
           EVYLKL+ YRQRSLARKK EKLAP+YYGPYK+IEEIGAVAYRL LP EA+IHNVFHISQL
Sbjct: 213 EVYLKLKPYRQRSLARKKSEKLAPRYYGPYKIIEEIGAVAYRLDLPPEAAIHNVFHISQL 272

Query: 61  KLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWES 120
           K KLG QQ VQHQ PMLTE FELQLW E VLG+RWN+ELG NEWLIKW+GLP+S+ATWES
Sbjct: 273 KPKLGAQQVVQHQHPMLTENFELQLWPENVLGIRWNKELGANEWLIKWQGLPESDATWES 332

Query: 121 VFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNV 160
           V+QMNQQFP FH+EDKVN+EPRGIVRPPI+HTYKRR   V
Sbjct: 333 VYQMNQQFPSFHLEDKVNVEPRGIVRPPILHTYKRRDSKV 372

[Close]
BLAST of Cucsat.G15699 vs. ExPASy TrEMBL
Match: A0A5A7U9P7 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001430 PE=4 SV=1)

HSP 1 Score: 270 bits (690), Expect = 1.50e-88
Identity = 128/160 (80.00%), Postives = 143/160 (89.38%), Query Frame = 0 

Query: 1   EVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQL 60
           EVYLKLR YRQRSLARKK EKLAP+YYGPYK+IEEIGA+ YRL LP EA+IHNVFHISQL
Sbjct: 132 EVYLKLRPYRQRSLARKKSEKLAPRYYGPYKIIEEIGAMTYRLDLPPEAAIHNVFHISQL 191

Query: 61  KLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWES 120
           K KLG Q+ VQHQ PMLTE FELQLW E VLG+RWN+ELG NEWLIKW+ LP+SEATWES
Sbjct: 192 KPKLGAQKVVQHQHPMLTENFELQLWPENVLGIRWNKELGANEWLIKWQSLPESEATWES 251

Query: 121 VFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNV 160
           V+QMNQQFP FH+EDKVN+EPRGIVRPPI+HTY+RR + V
Sbjct: 252 VYQMNQQFPSFHLEDKVNVEPRGIVRPPILHTYRRRDRKV 291

[Close]
BLAST of Cucsat.G15699 vs. ExPASy TrEMBL
Match: A0A5D3C2K2 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00230 PE=4 SV=1)

HSP 1 Score: 272 bits (695), Expect = 3.28e-88
Identity = 130/160 (81.25%), Postives = 143/160 (89.38%), Query Frame = 0 

Query: 1   EVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQL 60
           EVYLKL+ YRQRSLARKK EKLAP+YYGPYK+IEEIGAVAYRL LP EA+IHNVFHISQL
Sbjct: 213 EVYLKLKPYRQRSLARKKSEKLAPRYYGPYKIIEEIGAVAYRLDLPPEAAIHNVFHISQL 272

Query: 61  KLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWES 120
           K KLG QQ VQHQ PMLTE FELQLW E VLG+RWN+ELG NEWLIKW+GLP+S+ATWES
Sbjct: 273 KPKLGAQQVVQHQHPMLTENFELQLWPENVLGIRWNKELGANEWLIKWQGLPESDATWES 332

Query: 121 VFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNV 160
           V+QMNQQFP FH+E KVN+EPRGIVRPPI+HTYKRR   V
Sbjct: 333 VYQMNQQFPSFHLEHKVNVEPRGIVRPPILHTYKRRDSKV 372

The following BLAST results are available for this feature:
BLAST of Cucsat.G15699 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G15699 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031737236.19.54e-10993.33uncharacterized protein LOC116402184 [Cucumis sativus] >XP_031744846.1 uncharact... [more]
XP_031745420.14.92e-10892.73uncharacterized protein LOC116405633 [Cucumis sativus][more]
TYK29412.17.43e-9481.60Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0044281.14.10e-9180.37Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0040538.15.91e-8981.88Retrotransposable element Tf2 [Cucumis melo var. makuwa][more]
BLAST of Cucsat.G15699 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3E0H63.60e-9481.60Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TRS11.99e-9180.37Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7TCB12.86e-8981.88Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5A7U9P71.50e-8880.00Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A5D3C2K23.28e-8881.25Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010376Gamma-butyrobetaine hydroxylase-like, N-terminalPFAMPF06155GBBH-like_Ncoord: 5..80
e-value: 9.7E-21
score: 74.2
IPR038492GBBH-like, N-terminal domain superfamilyGENE3D3.30.2020.30coord: 3..85
e-value: 1.2E-18
score: 69.1
NoneNo IPR availablePANTHERPTHR35303:SF5OS02G0197800 PROTEINcoord: 5..111
NoneNo IPR availablePANTHERPTHR35303OS02G0197800 PROTEINcoord: 5..111

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G15699.T1Cucsat.G15699.T1mRNA
Cucsat.G15699.T4Cucsat.G15699.T4mRNA
Cucsat.G15699.T2Cucsat.G15699.T2mRNA
Cucsat.G15699.T3Cucsat.G15699.T3mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010158 abaxial cell fate specification
biological_process GO:0015074 DNA integration
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000976 transcription cis-regulatory region binding