Cucsat.G15600 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G15600
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	reticulocalbin-2
Location	ctg2009: 2771597 .. 2775155 (+)
RNA-Seq Expression	Cucsat.G15600
Synteny	Cucsat.G15600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTATACCTACGTGAAACAAACCAAAACTACAGGCAATAATGGAATGAATTTTGTTATATCCTTCTTTGCAATGTTTCTTGCTCAAATGAGTATTCCAAGTTCGAGCACCAAATGTGTCAAAATGCAATTTAATGCACATTTTGGTGTTTGCTTTTGCGATGCTCATTTCAGTAAGAAATGTTGCAACAAATGGAATGTTTTTTTTTAATTCTTTTTTTCAGTTTGAGGATCGATCGAACCTCTAACCTTAAGATCGATATTTTATACTCTATATTAGTTTAGCTATATTCATTTTAATATTTTTTCTCTTTTTTGTTACCAAACTTTGTAGTATCCCTTAATTACAAACTGTTTTATTTAAAATTCTTAAATTTTGGATGGTTTCAAACTTTCAATTTTCAAATTTTGAAGTTGATGATCGTTGTTTCCATTATTAAAAAAAGGAATATAGTATGGCGAGTTTTGATTAATGTTGTTTCACTATTGTAATTTGTAATGATTTGGATGAAAATTAATATTTTGGAGAGAGAAAAAAGCTAAATTTAGTTCCGGATAATTTACATCCATTTGACTTTTTTTTTTTTAAAAAAAAAATTAAAACTAAATTTATTTTCTCTTAATTTTCTATATTGAATTACAACGTTAAACTTTTAGCCAAATTTTAAAAACCATAACAATTTTCAAAAACTAATCTAAAATTAGAAGAAGAGAAAAACAAAAAGGAAATTATCCTAAATTGAAAATAATTTTTAAAAAGTTATTTTATTAACGTCTAAGAGTAAATATTTTTAATATACAAAACCTCTGAGCCTCAGAATCGATTCCACCGTTGCCTATTATTGCAAAGCTTAGTGAACGAACGGTACTCCGTTCATCTTCTTCCCCAGCCCTCACCTCCACCCATTTTCCACTTATTTTTTCTCAAATGTCGCCTTCTCTACGTATCCCTCCTTTTCCCCATCTAATCTCATCTCAATCTCTTCCGCCGCCAGAAAAATGGGGAAGGCGGTGGTATATGTTCTTACAGCCACCGTCTTCGCTCTCTTCTTCCTAATTTCTCCCTCCAATTTCCACAATCGGAGCCATCAACAGGCAACTCGTCGTCTAGGATTCAAATTCCCAAACCCTACTTTCGATCCTCTTGTTACGGAAATGGAGAGATTAGCAGCAGAGGAACGTGGTGAAAATGCGATTGGAGTGGACAATCAAAACCATAAGATCATCGATTCTTATAGAAATTACTACGATGAAGGGAGATTGAACATTTCGTTGAGGTTACTTGTGTTGTTTCCTTTGCTGGATAATTCGCCTAAAGATGGGGTTATCAGTTACGAGGAGTTGAGTGATTGGATTAATGGGCAAGCTATTGAAAGATTGAATTATAGAACGACGAAACAATTGGAGTTCTACGATAAGAATGGAGATGACGCCATTTCATTCCATGAATATCTGCCGCAGTTCACTGAGGAAGATATTGGTACGTGTTTCTTCATTTCTTTGATTATGATCGAAATTAGCTAAAATATTTTTCTGGTGATTTTAGGCTTAGTTTCTTCTCATTGTTGTGTTTCATAACGTTACTCTTTCTTGGTTTTTTTTGTTTCAATTTAGTTAGTTTTTTTTAAATGTTAAAATTTGAGAGGTTTGAATTTTGTTTCTATTTATACTTAGTTTTCGTAACCTTTTTAGTCTTGATTTTGTGTCTATTTATAATTTTAAATAAATAATTTCAAAGAATTATAGTTAATTAAACATCACCAATTTTCTATCTCTGTTTAGCAAAAAAGTGACGAAAAAGTAGTAGAGGTTTGTGAGGTGGGTTGAAATCTTTTTAGATTCAACTCAATTGTTCAGATCGTAAATTTGTCTGATTCAAATAATTTGAATTAAAAATTTAACCCAACACAATCTTGGAATACTTGGATTTGGTTATTTTCGGTTGGTTGAATCATTTAAAAATTTTATTCTAAAAAGAGTAAATTTCTCCGATTCAAATAATTTGAATTAAAAATTTAACCCAACACAAACTTGGAATACTTGGATTTGATTATTTTCTGTGGGTTGTTGGATCATTTAAAATTTTTGTTCTAAAAAAGTAAAGTGTGATTTGAAAACTCAATTCTAATTTATATAATACAACTGTTTTCGAAAGCACCAAAAAAACTACTTTTAAGATTTGTTGGAGGAGAATAAATTATCAAATAAACAATGAAATTGAATAAAACAAAAATAAATATTAAAAATATAATTGTATATAATTAAGAGGGAAAGGTTTTACATTACACTTGGCTGTAAAATTGTATAAAGAGGGTTTTGATGAACTGTTGTGTAACCAAAAGCGTACGTATTTTGCCTAATTAAAATATAAAAATGTAAGCAACTACTGTTGTGTAAAAATGTTTGACTGAATAATTGATATAGGAATAATGTGAGAGTGAGGAAAACACTACATTAGAATCCGTACAAAGGAACAACATTTAGATATGTAAAACCTTTGAAATATGTAGGAAAGTCATAGAGTATATATGGTAACTTTTCAAAAAAAAGAAAAAAGAAAAAAGAAAATTGGATATCACTTTTAGAAAAAGTAGAAGGTAATTTTTGTAAGTTAGGGTATTATTTTTCACATTGTGGGACTGAGACAGAAATAACATAGTGAATATATTATATTTTTGAATGAAACAGCAAGAAATGAAACGGGATATGGAGAAGCTGGATGGTGGAGAAAGCAATTCACAAATGCGGATGTTGACAACAATGGCTTACTATATTTTGATGAACTTAAAGAGTAATGTCCCATCTTTCTCTACCATAAACAATAAGGTCTACTTCACTATTTTTAACCTTAATTACTATACATAAGAATATGTATATGTATACAAACTTATTACAATATTATCATAAACATTGCCTAGTGTAATTTTAGAGAAAAATCAATACCTTGGACATGTGTGCTGATGGTCACCTAGAAAGGTGTGGCAATGTTCAAGTTTCAATTTATACTATTTCAAATGTAGTATTGTAATATTTTAAATGATTCACAATTTTTTTAAGGTTAAAATACCATTTTATGGTATACTTTAGTTTATTTAATTTTAGTCTCCAACTTTCAAGAGTACTTTTGCTATAAGGTTTTAAAAATGCATTCACTTATTGTATTTCCTTACATGAAAATTATTGTAATTATTTAATCAATTCGAGTAAAAACTAACTTTCAAGGACTACAATTAAAATTTTATTAGAAGCACAGACTTAAACTGAATCTAACCGAGACCAAAAAAAGTTTTTAATTCTTTTTTTAAAAGGGTATGAGATATTTGTATCTTGCAGTTTCCTTCACCCAGAAGATAGCAGCAATTACCGAATACAAAACTGGCTGTTGGCACAGAAAATGAAGTAACTTCTTCCGCTATACTTGAATCCATTAACCTTTATCATCTTAAAACCAAACCATCATCTTCCTGTTTAATTCATTCTTATGCAGGCGCATGGACCATGACAAAGATGGAAAGCTCAATTTTGATGAATTCCTTCACCATACATATGATATATACAAGAACTATATTGAATTTGAAACTCAAGGCGAAGATGTACCAAGCGCTGAAGAGAAGTTTGATGAGCTTGATCTCGACGAGGATGAGTATGGCAATGCATTTGTTTGGAGAGTTATTTTTAGGGAAATTTTATATATATCAAAATACAAAAATTTCATCAACTCATCGAAATGACTTTTTTTTCTATTTACTATACTATTTCAGTCTTTATAATTTTGATGTTGTTTCATTTTAGTTTCTATACTATCAATATGTTCGTTTTTAGTTCACACGCTTTTAACTTTGGTTCTCATTTTGGTTCTTATATCATTTTTAAAGAACCAAAATTGTCTATCTTTTTTAAAGTTCAAGGACCAAACTGAATAAAAAACAAAAGTATAAGGACTAAAATAGTATTTAAACTTGTTTATATGTATTTGAAAAATATTTGTAATGGTTTTGTCCGTTCTCTCTCACTTTTGTTGTTAATTTATTTGTAATATCAAACATTTTTGTGCAGAGTATTGTCAACGGAAGAATTAAGACCATTGTTCCAGTATCTTCATCCTGGAGAAGTGTCTTATGCTCAACATTACACAAGTCATTTGATTAATGAGGTACGTAATTAGTAGTTGAATTGAAGAGATTAAGATAAAGTAATCAAACTCAAAGATGATGAAGGTGAGTTAATAATGTGTGGTAATTAAAATTGAACAATGCAGGCTGACGACAATAAAGATGGGTACTTAACAATCGATGAAATGCTTAATCATGAGTATGTTTTCTACAGCACAGTATATGAAAATCAGAATGGAGATTACGAAGATGATTACCATGATGAACTTTGATTTTTCTTCTTTTTTCCCCATTTTTTGAAGCTTAGATTTTAGATTTCATTTGCATATAAAGTGTATTGGGTTACAATTTTACTAAACCCTCCCACCCCTTGTGGATTTTGATTCTTTTTCGACCAGGAATTTTTGTAGAGAAAAAATTTCTGTTCCCATTTTATTATTAAAATTTCATTTATTGTAATTCTTTTTTCTTT

Coding sequence (CDS)

ATGGGGAAGGCGGTGGTATATGTTCTTACAGCCACCGTCTTCGCTCTCTTCTTCCTAATTTCTCCCTCCAATTTCCACAATCGGAGCCATCAACAGGCAACTCGTCGTCTAGGATTCAAATTCCCAAACCCTACTTTCGATCCTCTTGTTACGGAAATGGAGAGATTAGCAGCAGAGGAACGTGGTGAAAATGCGATTGGAGTGGACAATCAAAACCATAAGATCATCGATTCTTATAGAAATTACTACGATGAAGGGAGATTGAACATTTCGTTGAGGTTACTTGTGTTGTTTCCTTTGCTGGATAATTCGCCTAAAGATGGGGTTATCAGTTACGAGGAGTTGAGTGATTGGATTAATGGGCAAGCTATTGAAAGATTGAATTATAGAACGACGAAACAATTGGAGTTCTACGATAAGAATGGAGATGACGCCATTTCATTCCATGAATATCTGCCGCAGTTCACTGAGGAAGATATTGCAAGAAATGAAACGGGATATGGAGAAGCTGGATGGTGGAGAAAGCAATTCACAAATGCGGATGTTGACAACAATGGCTTACTATATTTTGATGAACTTAAAGATTTCCTTCACCCAGAAGATAGCAGCAATTACCGAATACAAAACTGGCTGTTGGCACAGAAAATGAAGCGCATGGACCATGACAAAGATGGAAAGCTCAATTTTGATGAATTCCTTCACCATACATATGATATATACAAGAACTATATTGAATTTGAAACTCAAGGCGAAGATGTACCAAGCGCTGAAGAGAAGTTTGATGAGCTTGATCTCGACGAGGATGAAGTATTGTCAACGGAAGAATTAAGACCATTGTTCCAGTATCTTCATCCTGGAGAAGTGTCTTATGCTCAACATTACACAAGTCATTTGATTAATGAGGCTGACGACAATAAAGATGGGTACTTAACAATCGATGAAATGCTTAATCATGAGTATGTTTTCTACAGCACAGTATATGAAAATCAGAATGGAGATTACGAAGATGATTACCATGATGAACTTTGA

Protein sequence

MGKAVVYVLTATVFALFFLISPSNFHNRSHQQATRRLGFKFPNPTFDPLVTEMERLAAEERGENAIGVDNQNHKIIDSYRNYYDEGRLNISLRLLVLFPLLDNSPKDGVISYEELSDWINGQAIERLNYRTTKQLEFYDKNGDDAISFHEYLPQFTEEDIARNETGYGEAGWWRKQFTNADVDNNGLLYFDELKDFLHPEDSSNYRIQNWLLAQKMKRMDHDKDGKLNFDEFLHHTYDIYKNYIEFETQGEDVPSAEEKFDELDLDEDEVLSTEELRPLFQYLHPGEVSYAQHYTSHLINEADDNKDGYLTIDEMLNHEYVFYSTVYENQNGDYEDDYHDEL

Homology

[Close]

BLAST of Cucsat.G15600 vs. ExPASy Swiss-Prot
Match: J3S9D9 (Reticulocalbin-2 OS=Crotalus adamanteus OX=8729 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.2e-04
Identity = 36/120 (30.00%), Postives = 54/120 (45.00%), Query Frame = 0


Query: 93  RLLVLFPLLDNSPKDGVISYEELSDWINGQAIERLNYRTTKQLEFYDKNGDDAISFHEYL 152
           RL V+   +D    DG ++  ELS WI       +     +Q + YDK+GD  +S+ EY 
Sbjct: 54  RLKVIISRID-VDLDGFLTEAELSSWIQHSFKSYIIEDAKQQFQHYDKDGDGRVSWEEYN 113

Query: 153 PQF----------TEEDIARNETGYGEAGWWRKQFTNADVDNNGLLYFDELKDFLHPEDS 203
            Q           T  D A  E+        +K+F  A+ D +  L F+E   F HPE++
Sbjct: 114 IQMYDRVIDFEEDTTLDDAEEESFRQLHLKDKKRFQKANKDGDSHLDFEEFAAFEHPEEA 172

[Close]

BLAST of Cucsat.G15600 vs. NCBI nr
Match: XP_011651314.1 (reticulocalbin-2 [Cucumis sativus] >KGN57652.1 hypothetical protein Csa_010748 [Cucumis sativus])

HSP 1 Score: 451 bits (1161), Expect = 2.25e-158
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MGKAVVYVLTATVFALFFLISPSNFHNRSHQQATRRLGFKFPNPTFDPLVTEMERLAAEE 60
           MGKAVVYVLTATVFALFFLISPSNFHNRSHQQATRRLGFKFPNPTFDPLVTEMERLAAEE
Sbjct: 1   MGKAVVYVLTATVFALFFLISPSNFHNRSHQQATRRLGFKFPNPTFDPLVTEMERLAAEE 60

Query: 61  RGENAIGVDNQNHKIIDSYRNYYDEGRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN 120
           RGENAIGVDNQNHKIIDSYRNYYDEGRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN
Sbjct: 61  RGENAIGVDNQNHKIIDSYRNYYDEGRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN 120

Query: 121 GQAIERLNYRTTKQLEFYDKNGDDAISFHEYLPQFTEEDIARNETGYGEAGWWRKQFTNA 180
           GQAIERLNYRTTKQLEFYDKNGDDAISFHEYLPQFTEEDIARNETGYGEAGWWRKQFTNA
Sbjct: 121 GQAIERLNYRTTKQLEFYDKNGDDAISFHEYLPQFTEEDIARNETGYGEAGWWRKQFTNA 180

Query: 181 DVDNNGLLYFDELKDFLHPEDSSNYRIQNWLLAQKMK 217
           DVDNNGLLYFDELKDFLHPEDSSNYRIQNWLLAQKMK
Sbjct: 181 DVDNNGLLYFDELKDFLHPEDSSNYRIQNWLLAQKMK 217

[Close]

BLAST of Cucsat.G15600 vs. NCBI nr
Match: TYK11288.1 (reticulocalbin-2 [Cucumis melo var. makuwa])

HSP 1 Score: 424 bits (1089), Expect = 2.13e-147
Identity = 201/217 (92.63%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MGKAVVYVLTATVFALFFLISPSNFHNRSHQQATRRLGFKFPNPTFDPLVTEMERLAAEE 60
           MGKAVVYVLTAT FA+FFLISPSNFHNR++QQ TRRLGFKFPNPTFDPLVTEMERL AEE
Sbjct: 1   MGKAVVYVLTATAFAVFFLISPSNFHNRNYQQPTRRLGFKFPNPTFDPLVTEMERLEAEE 60

Query: 61  RGENAIGVDNQNHKIIDSYRNYYDEGRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN 120
           RGENAIG++NQNHKI D+YRNYYDEGRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN
Sbjct: 61  RGENAIGMENQNHKITDAYRNYYDEGRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN 120

Query: 121 GQAIERLNYRTTKQLEFYDKNGDDAISFHEYLPQFTEEDIARNETGYGEAGWWRKQFTNA 180
           GQAIERLNYRTTKQLEFYDKNGD+AISFHEYLPQFT+EDIARN+TGYGEAGWW KQFTNA
Sbjct: 121 GQAIERLNYRTTKQLEFYDKNGDNAISFHEYLPQFTKEDIARNDTGYGEAGWWIKQFTNA 180

Query: 181 DVDNNGLLYFDELKDFLHPEDSSNYRIQNWLLAQKMK 217
           DVD NGLL+FDELKDFLHPEDSSNYRIQNWLLAQKMK
Sbjct: 181 DVDQNGLLHFDELKDFLHPEDSSNYRIQNWLLAQKMK 217

[Close]

BLAST of Cucsat.G15600 vs. NCBI nr
Match: XP_008455987.1 (PREDICTED: reticulocalbin-2 [Cucumis melo] >KAA0050524.1 reticulocalbin-2 [Cucumis melo var. makuwa])

HSP 1 Score: 423 bits (1087), Expect = 4.29e-147
Identity = 201/217 (92.63%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MGKAVVYVLTATVFALFFLISPSNFHNRSHQQATRRLGFKFPNPTFDPLVTEMERLAAEE 60
           MGKAVVYVLTAT FA+FFLISPSNFH+R++QQ TRRLGFKFPNPTFDPLVTEMERL AEE
Sbjct: 1   MGKAVVYVLTATAFAVFFLISPSNFHSRNYQQPTRRLGFKFPNPTFDPLVTEMERLEAEE 60

Query: 61  RGENAIGVDNQNHKIIDSYRNYYDEGRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN 120
           RGENAIGV+NQNHKI D+YRNYYD+GRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN
Sbjct: 61  RGENAIGVENQNHKITDAYRNYYDDGRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN 120

Query: 121 GQAIERLNYRTTKQLEFYDKNGDDAISFHEYLPQFTEEDIARNETGYGEAGWWRKQFTNA 180
           GQAIERLNYRTTKQLEFYDKNGD+AISFHEYLPQFT+EDIARNETGYGEAGWW KQFTNA
Sbjct: 121 GQAIERLNYRTTKQLEFYDKNGDNAISFHEYLPQFTKEDIARNETGYGEAGWWIKQFTNA 180

Query: 181 DVDNNGLLYFDELKDFLHPEDSSNYRIQNWLLAQKMK 217
           DVD NGLL+FDELKDFLHPEDSSNYRIQNWLLAQKMK
Sbjct: 181 DVDQNGLLHFDELKDFLHPEDSSNYRIQNWLLAQKMK 217

[Close]

BLAST of Cucsat.G15600 vs. NCBI nr
Match: XP_038880351.1 (calumenin-B [Benincasa hispida])

HSP 1 Score: 344 bits (883), Expect = 4.37e-116
Identity = 171/220 (77.73%), Postives = 183/220 (83.18%), Query Frame = 0


Query: 1   MGKAVVYVLTATVFALFFLISPSNFHNRSHQQATRRLGFKFPNPTFDPLVTEMERLAAEE 60
           MG+AV YVL +T FA FFL SPSN  +  HQ+ +RRLGFKF  PTFDPL  EMERLA E 
Sbjct: 1   MGRAVAYVLISTAFAAFFLFSPSNLQDWKHQELSRRLGFKFRTPTFDPLFAEMERLAEE- 60

Query: 61  RGENAIGVDNQN----HKIIDSYRNYYDEGRLNISLRLLVLFPLLDNSPKDGVISYEELS 120
              NAIGV+NQN    +++ D  ++YYDEG LNISLRLLVLFPLLD+SPKDG ISYEELS
Sbjct: 61  ---NAIGVENQNSAKRNQVRDDCKHYYDEGSLNISLRLLVLFPLLDHSPKDGAISYEELS 120

Query: 121 DWINGQAIERLNYRTTKQLEFYDKNGDDAISFHEYLPQFTEEDIARNETGYGEAGWWRKQ 180
           DWI GQAIERLNYRT KQL F DKNGD AISFHEYLPQFTEEDIARNETGYGEAGWWRKQ
Sbjct: 121 DWITGQAIERLNYRTGKQLAFNDKNGDGAISFHEYLPQFTEEDIARNETGYGEAGWWRKQ 180

Query: 181 FTNADVDNNGLLYFDELKDFLHPEDSSNYRIQNWLLAQKM 216
           FTNADVD N LL FDELKDFLHPEDSSNYRIQNWLL QKM
Sbjct: 181 FTNADVDQNNLLNFDELKDFLHPEDSSNYRIQNWLLRQKM 216

[Close]

BLAST of Cucsat.G15600 vs. NCBI nr
Match: XP_022141310.1 (reticulocalbin-2 [Momordica charantia])

HSP 1 Score: 316 bits (809), Expect = 8.87e-105
Identity = 154/222 (69.37%), Postives = 179/222 (80.63%), Query Frame = 0


Query: 1   MGKAVVYVLTATVFALFFLISPSNFHNRSHQQATRRLGFKFPNPTFDPLVTEMERLAAEE 60
           MG+AVVY+   T FA FF+  PSN  +R+HQ+ TRRLG+K   PTFDPLV EMER A E 
Sbjct: 1   MGRAVVYLFLITAFAFFFVFYPSNSPDRNHQELTRRLGYKLRAPTFDPLVEEMERYAEEH 60

Query: 61  ---RGENAIGVDNQN--HKIIDSYRNYYDEGRLNISLRLLVLFPLLDNSPKDGVISYEEL 120
              RG NAI        +++ D+Y++YYDEGRL ISLRLLVLFPLLD+SPKDGVISYEEL
Sbjct: 61  GSGRGRNAISGQRTTTANQVPDAYKDYYDEGRLKISLRLLVLFPLLDHSPKDGVISYEEL 120

Query: 121 SDWINGQAIERLNYRTTKQLEFYDKNGDDAISFHEYLPQFTEEDIARNETGYGEAGWWRK 180
           SDWI  QA++RLNYRT K+L+F+DKNGD AISF EYLPQFTEEDIA+  T +GEAGWW++
Sbjct: 121 SDWIIEQAVQRLNYRTRKELDFHDKNGDGAISFREYLPQFTEEDIAKRGTAHGEAGWWKR 180

Query: 181 QFTNADVDNNGLLYFDELKDFLHPEDSSNYRIQNWLLAQKMK 217
           QFTNAD D NGLL F+ELKDFLHPEDSSNYRIQNWLL +KMK
Sbjct: 181 QFTNADTDPNGLLNFEELKDFLHPEDSSNYRIQNWLLREKMK 222

[Close]

BLAST of Cucsat.G15600 vs. ExPASy TrEMBL
Match: A0A0A0LAH3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238180 PE=4 SV=1)

HSP 1 Score: 451 bits (1161), Expect = 1.09e-158
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MGKAVVYVLTATVFALFFLISPSNFHNRSHQQATRRLGFKFPNPTFDPLVTEMERLAAEE 60
           MGKAVVYVLTATVFALFFLISPSNFHNRSHQQATRRLGFKFPNPTFDPLVTEMERLAAEE
Sbjct: 1   MGKAVVYVLTATVFALFFLISPSNFHNRSHQQATRRLGFKFPNPTFDPLVTEMERLAAEE 60

Query: 61  RGENAIGVDNQNHKIIDSYRNYYDEGRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN 120
           RGENAIGVDNQNHKIIDSYRNYYDEGRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN
Sbjct: 61  RGENAIGVDNQNHKIIDSYRNYYDEGRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN 120

Query: 121 GQAIERLNYRTTKQLEFYDKNGDDAISFHEYLPQFTEEDIARNETGYGEAGWWRKQFTNA 180
           GQAIERLNYRTTKQLEFYDKNGDDAISFHEYLPQFTEEDIARNETGYGEAGWWRKQFTNA
Sbjct: 121 GQAIERLNYRTTKQLEFYDKNGDDAISFHEYLPQFTEEDIARNETGYGEAGWWRKQFTNA 180

Query: 181 DVDNNGLLYFDELKDFLHPEDSSNYRIQNWLLAQKMK 217
           DVDNNGLLYFDELKDFLHPEDSSNYRIQNWLLAQKMK
Sbjct: 181 DVDNNGLLYFDELKDFLHPEDSSNYRIQNWLLAQKMK 217

[Close]

BLAST of Cucsat.G15600 vs. ExPASy TrEMBL
Match: A0A5D3CJD2 (Reticulocalbin-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001480 PE=4 SV=1)

HSP 1 Score: 424 bits (1089), Expect = 1.03e-147
Identity = 201/217 (92.63%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MGKAVVYVLTATVFALFFLISPSNFHNRSHQQATRRLGFKFPNPTFDPLVTEMERLAAEE 60
           MGKAVVYVLTAT FA+FFLISPSNFHNR++QQ TRRLGFKFPNPTFDPLVTEMERL AEE
Sbjct: 1   MGKAVVYVLTATAFAVFFLISPSNFHNRNYQQPTRRLGFKFPNPTFDPLVTEMERLEAEE 60

Query: 61  RGENAIGVDNQNHKIIDSYRNYYDEGRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN 120
           RGENAIG++NQNHKI D+YRNYYDEGRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN
Sbjct: 61  RGENAIGMENQNHKITDAYRNYYDEGRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN 120

Query: 121 GQAIERLNYRTTKQLEFYDKNGDDAISFHEYLPQFTEEDIARNETGYGEAGWWRKQFTNA 180
           GQAIERLNYRTTKQLEFYDKNGD+AISFHEYLPQFT+EDIARN+TGYGEAGWW KQFTNA
Sbjct: 121 GQAIERLNYRTTKQLEFYDKNGDNAISFHEYLPQFTKEDIARNDTGYGEAGWWIKQFTNA 180

Query: 181 DVDNNGLLYFDELKDFLHPEDSSNYRIQNWLLAQKMK 217
           DVD NGLL+FDELKDFLHPEDSSNYRIQNWLLAQKMK
Sbjct: 181 DVDQNGLLHFDELKDFLHPEDSSNYRIQNWLLAQKMK 217

[Close]

BLAST of Cucsat.G15600 vs. ExPASy TrEMBL
Match: A0A5A7U5L5 (Reticulocalbin-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001680 PE=4 SV=1)

HSP 1 Score: 423 bits (1087), Expect = 2.08e-147
Identity = 201/217 (92.63%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MGKAVVYVLTATVFALFFLISPSNFHNRSHQQATRRLGFKFPNPTFDPLVTEMERLAAEE 60
           MGKAVVYVLTAT FA+FFLISPSNFH+R++QQ TRRLGFKFPNPTFDPLVTEMERL AEE
Sbjct: 1   MGKAVVYVLTATAFAVFFLISPSNFHSRNYQQPTRRLGFKFPNPTFDPLVTEMERLEAEE 60

Query: 61  RGENAIGVDNQNHKIIDSYRNYYDEGRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN 120
           RGENAIGV+NQNHKI D+YRNYYD+GRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN
Sbjct: 61  RGENAIGVENQNHKITDAYRNYYDDGRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN 120

Query: 121 GQAIERLNYRTTKQLEFYDKNGDDAISFHEYLPQFTEEDIARNETGYGEAGWWRKQFTNA 180
           GQAIERLNYRTTKQLEFYDKNGD+AISFHEYLPQFT+EDIARNETGYGEAGWW KQFTNA
Sbjct: 121 GQAIERLNYRTTKQLEFYDKNGDNAISFHEYLPQFTKEDIARNETGYGEAGWWIKQFTNA 180

Query: 181 DVDNNGLLYFDELKDFLHPEDSSNYRIQNWLLAQKMK 217
           DVD NGLL+FDELKDFLHPEDSSNYRIQNWLLAQKMK
Sbjct: 181 DVDQNGLLHFDELKDFLHPEDSSNYRIQNWLLAQKMK 217

[Close]

BLAST of Cucsat.G15600 vs. ExPASy TrEMBL
Match: A0A1S3C255 (reticulocalbin-2 OS=Cucumis melo OX=3656 GN=LOC103496051 PE=4 SV=1)

HSP 1 Score: 423 bits (1087), Expect = 2.08e-147
Identity = 201/217 (92.63%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MGKAVVYVLTATVFALFFLISPSNFHNRSHQQATRRLGFKFPNPTFDPLVTEMERLAAEE 60
           MGKAVVYVLTAT FA+FFLISPSNFH+R++QQ TRRLGFKFPNPTFDPLVTEMERL AEE
Sbjct: 1   MGKAVVYVLTATAFAVFFLISPSNFHSRNYQQPTRRLGFKFPNPTFDPLVTEMERLEAEE 60

Query: 61  RGENAIGVDNQNHKIIDSYRNYYDEGRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN 120
           RGENAIGV+NQNHKI D+YRNYYD+GRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN
Sbjct: 61  RGENAIGVENQNHKITDAYRNYYDDGRLNISLRLLVLFPLLDNSPKDGVISYEELSDWIN 120

Query: 121 GQAIERLNYRTTKQLEFYDKNGDDAISFHEYLPQFTEEDIARNETGYGEAGWWRKQFTNA 180
           GQAIERLNYRTTKQLEFYDKNGD+AISFHEYLPQFT+EDIARNETGYGEAGWW KQFTNA
Sbjct: 121 GQAIERLNYRTTKQLEFYDKNGDNAISFHEYLPQFTKEDIARNETGYGEAGWWIKQFTNA 180

Query: 181 DVDNNGLLYFDELKDFLHPEDSSNYRIQNWLLAQKMK 217
           DVD NGLL+FDELKDFLHPEDSSNYRIQNWLLAQKMK
Sbjct: 181 DVDQNGLLHFDELKDFLHPEDSSNYRIQNWLLAQKMK 217

[Close]

BLAST of Cucsat.G15600 vs. ExPASy TrEMBL
Match: A0A6J1CHQ2 (reticulocalbin-2 OS=Momordica charantia OX=3673 GN=LOC111011736 PE=4 SV=1)

HSP 1 Score: 316 bits (809), Expect = 4.29e-105
Identity = 154/222 (69.37%), Postives = 179/222 (80.63%), Query Frame = 0


Query: 1   MGKAVVYVLTATVFALFFLISPSNFHNRSHQQATRRLGFKFPNPTFDPLVTEMERLAAEE 60
           MG+AVVY+   T FA FF+  PSN  +R+HQ+ TRRLG+K   PTFDPLV EMER A E 
Sbjct: 1   MGRAVVYLFLITAFAFFFVFYPSNSPDRNHQELTRRLGYKLRAPTFDPLVEEMERYAEEH 60

Query: 61  ---RGENAIGVDNQN--HKIIDSYRNYYDEGRLNISLRLLVLFPLLDNSPKDGVISYEEL 120
              RG NAI        +++ D+Y++YYDEGRL ISLRLLVLFPLLD+SPKDGVISYEEL
Sbjct: 61  GSGRGRNAISGQRTTTANQVPDAYKDYYDEGRLKISLRLLVLFPLLDHSPKDGVISYEEL 120

Query: 121 SDWINGQAIERLNYRTTKQLEFYDKNGDDAISFHEYLPQFTEEDIARNETGYGEAGWWRK 180
           SDWI  QA++RLNYRT K+L+F+DKNGD AISF EYLPQFTEEDIA+  T +GEAGWW++
Sbjct: 121 SDWIIEQAVQRLNYRTRKELDFHDKNGDGAISFREYLPQFTEEDIAKRGTAHGEAGWWKR 180

Query: 181 QFTNADVDNNGLLYFDELKDFLHPEDSSNYRIQNWLLAQKMK 217
           QFTNAD D NGLL F+ELKDFLHPEDSSNYRIQNWLL +KMK
Sbjct: 181 QFTNADTDPNGLLNFEELKDFLHPEDSSNYRIQNWLLREKMK 222

The following BLAST results are available for this feature:

BLAST of Cucsat.G15600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
J3S9D9	3.2e-04	30.00	Reticulocalbin-2 OS=Crotalus adamanteus OX=8729 PE=1 SV=1	[more]

BLAST of Cucsat.G15600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651314.1	2.25e-158	100.00	reticulocalbin-2 [Cucumis sativus] >KGN57652.1 hypothetical protein Csa_010748 [...	[more]
TYK11288.1	2.13e-147	92.63	reticulocalbin-2 [Cucumis melo var. makuwa]	[more]
XP_008455987.1	4.29e-147	92.63	PREDICTED: reticulocalbin-2 [Cucumis melo] >KAA0050524.1 reticulocalbin-2 [Cucum...	[more]
XP_038880351.1	4.37e-116	77.73	calumenin-B [Benincasa hispida]	[more]
XP_022141310.1	8.87e-105	69.37	reticulocalbin-2 [Momordica charantia]	[more]

BLAST of Cucsat.G15600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAH3	1.09e-158	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238180 PE=4 SV=1	[more]
A0A5D3CJD2	1.03e-147	92.63	Reticulocalbin-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001...	[more]
A0A5A7U5L5	2.08e-147	92.63	Reticulocalbin-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001...	[more]
A0A1S3C255	2.08e-147	92.63	reticulocalbin-2 OS=Cucumis melo OX=3656 GN=LOC103496051 PE=4 SV=1	[more]
A0A6J1CHQ2	4.29e-105	69.37	reticulocalbin-2 OS=Momordica charantia OX=3673 GN=LOC111011736 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.238.10		coord: 89..217 e-value: 2.4E-11 score: 45.4
None	No IPR available	PANTHER	PTHR10827	RETICULOCALBIN	coord: 1..217
None	No IPR available	PANTHER	PTHR10827:SF77	CALCIUM-BINDING EF HAND FAMILY PROTEIN	coord: 1..217
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 139..151
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 94..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G15600.T1	Cucsat.G15600.T1	mRNA
Cucsat.G15600.T2	Cucsat.G15600.T2	mRNA
Cucsat.G15600.T5	Cucsat.G15600.T5	mRNA
Cucsat.G15600.T6	Cucsat.G15600.T6	mRNA
Cucsat.G15600.T7	Cucsat.G15600.T7	mRNA
Cucsat.G15600.T3	Cucsat.G15600.T3	mRNA
Cucsat.G15600.T10	Cucsat.G15600.T10	mRNA
Cucsat.G15600.T4	Cucsat.G15600.T4	mRNA
Cucsat.G15600.T9	Cucsat.G15600.T9	mRNA
Cucsat.G15600.T8	Cucsat.G15600.T8	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005509	calcium ion binding