Cucsat.G15569 (gene) Cucumber (B10) v3

Overview
NameCucsat.G15569
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptiontransmembrane emp24 domain-containing protein p24delta3-like
Locationctg2009: 1764216 .. 1766441 (+)
RNA-Seq ExpressionCucsat.G15569
SyntenyCucsat.G15569
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGGAAAAAAATGGAAATTTAATTGTTCGTGAAGGAACAAAACGATACGAAGAGAGTCGGGAGAATTCAGATTACCAAAGTCATTGGCTTCTTCTTCTTACTCCTCCATTTCTAATCTCTGATCTGAAACCACAAATCGGATTCCATTTGCGATTTCTAGATTCAGAAACATCATGCGCTGGGAAGTTGTATTGCCGTTGTTCCTCCTCTGTTTCTTCGCCACAGATCTTCTTCGAACTGCCCATTCAATCTGGTTGAACTTGCCTCCATCTGGGACCAAGTGCGTCTCCGAGGAAATCCAGACCAACGTTGTCGTTCTTGCCGATTATGTCGTCGTCGCTGATCATTCTCACTCCCCCACCATCTCTATCAAGGTCAATTTTCCACATTAAACCTTTTTTCTTTTTCAATGCCTCTTTCATTAGTGCCCTTGGAGTTTTGCATTTCAAGTTTCTTGATTCGTTAATATGTTTCATTAGTGCCCTTGGGCTATAGAATACAATTGATACGCTTAATTAAAAAAAAACCCACCCTGATGGGTACGATTGGTTCTTGTTTATGCTATGTATTTGTTGATTTGTCACTCCCGTTTGGTTTTGCCCACCAATTGCGAAATGCAAAGAACTATGATCTATTTCTTTTGGATTTCTCCCCTTTTTTTCTCTTCGAATTATAATTCTAAATTCTGATGTTTTCACAACCCTGTAGGCATATCATTGCAGTGAGATAAAAGAAAGAGATTACTTCTGTGAATGTAATCTTTTCTTTACTGCTATGGAGGCTGTTTCGTCCAATTTTTGTTTGTTTGGTTTCTGATTTTGGCTGTTAAGATTATTTCAAAACATTTGTAGGAATTGTTGTAGATTGATTTCTAGGATAAGAGGAATACCTTGGGAATTTGCTGCTGACCTAACTTAACATATGGTTTTTGCAAATTGTTTAAGAGAATTCTTCTTCATGCATATGATTTCTAGTCTATTTTGACGTTTGGAGGATGATTCATGAGGAGGGTGATGAAAAAGTTGGATCTTGGATCTGAGGTGTCACTTTTTTAAAGGTCTTTTCCAGTAAAGTGATGGTGATAAAATTCAAATTGCTCTTGGCACACATCATGCACCTTACTTTCCTGATAACGATTTAAATTGGATAACAAGAATTTAGGAGCTTAGCTCTCGTTTCCATGTCCTTGTACAATTTCTTGAAAATTACATGTCATATTTTAGATCCCCACCCACAACCATACACAACCCCACCCCAAACCAAGGGAGAGAGGAAAAAGAAAAAGAGAAAAGGAATCTCAAAACGTTAATAGTATTTATGTTATTGACATAGCGGATCCTTATTTACAGTTCAATTTGAGTCTCTAGATGAAATGCTTTGGCCATTTCTTTGGTGGATTGCATTGAGGGGTTGTTTCTTAACCTACGTATCCCTGCTGAACATCTTTAAGAGAACATTGCACTTGGTAAATTAGCTTCGTTTGCTATTTCTTGGTTTTAACTAATTTCTCTTTGACCCCCCAATCTAAGACTTCAACAACTCCTGTCAAGTTTAGACTTGCCGGTGCTTAGACCATTTCATCTGTACTACCGATGGAGTCACTGTTCATGTAGAGTTGTAAACAACCAGGTCAACTGCACTCTATATTTTAGGGTAACTAGCCATTCCATTGGTTGTGCCTGCACTATGGCTCTCAATGACCTATAGTTATCTTTACCTTAAAGGAAAGCATTGAAAATGGCAGATTTGAAAGCTTCCTTGGATGATTTGGCTTTGTCTTGTAAAATTCTTGTTTTTGTTCTTCTCAAACCTTTCACAAAATCCATTAATTTTAAAGACATGAGCTAATGATGTTTTTGGTTGATGTGTGGAAAGAGTTTCTTTTCAAGTTGATGGGTAGCTTCTTCTAATATCTTGATGTCTGTTATTGTTTTACACTTAACTGATCAATGATGGGCTCATTTAGGTGACATCTCCGTATGGGAACAATCTTCATCACTCAGAGAATGTAACACACGGCCAGTTTGCATTTACGACTACTGAGGCTGGTAATTACCTAGTATGTTTCTGGTTGTCTGACCACAAACATGAAGCTGGCAATGAGATAAGCGTCAACCTTGATTGGAGAACTGGTATTGCAGCCAAGGATTGGGAATCAGTTGCAAAAAAAGAGAAGATTGAGGTAACGACCTCCTCTTCACCTTTCCACATTCACTATGCCCTAAAACATCCATTCTAATGCTCAACCTCATTCTCATTTAGGGTGTTGAACTCGAGCTGAGGAAACTGGAGGGGGCAGTTGAAGCTATTCATGAAAATCTACTCTATCTCAAGGACAGGTAACTAAGTTTCCATGGTAAAAATGGATGCTTAACAAAATCTAGCCATTAAACTCATTTATATAATTTTGGATTGTTACAGAGAAGCAGATATGAGGACAGTGAGCGAGAGGACAAACGCACGAGTTGCGTGGTACAGCGTCATGTCCTTGGGCGTGTGCATTGCTGCTTCTACTTTACAAATATGGTACTTGAAGCGATTCTTTCAGAAGAAAAAACTTATTTAGAGACTCTTCTAACTCATGTTTCAGAAAGAGATTGTTAACTTATTTAGTTTTATTTCTTCATACAAAGTAGAGAAGTTTTGACACGAACTGCAAGCCATGCAGGGCTTGTTTATAATTTTTATTCCAGATTTTGTTTTTTCTTTTTCCTCTGTTTCTTTGATAGAATTTAGAGAGTTTTGCTTGTTGAGATTCAATGTTGTTGTTCATCATCCTTTACAAGATTAGGATTCTTAGAGAAATTGAAGGTCAAGGAGATGGATCATACCATAATTTGATCAAAATGTGAGCATATAAGATATAGTTGCAAATCAGCAGCTTAGCTAGCAGCTTCAGTTTCTATTAGTCCCAAGTTTAACTTAAGACAATATGGTTGACAATGTTTAGCTTTGAATAATCCCATTTTTTTTTCCTTGAAGAAATCAAAAGAATTAAGATCAATCCAGCTCAATTGAATTGATTA

Coding sequence (CDS)

ATGCGCTGGGAAGTTGTATTGCCGTTGTTCCTCCTCTGTTTCTTCGCCACAGATCTTCTTCGAACTGCCCATTCAATCTGGTTGAACTTGCCTCCATCTGGGACCAAGTGCGTCTCCGAGGAAATCCAGACCAACGTTGTCGTTCTTGCCGATTATGTCGTCGTCGCTGATCATTCTCACTCCCCCACCATCTCTATCAAGGTGACATCTCCGTATGGGAACAATCTTCATCACTCAGAGAATGTAACACACGGCCAGTTTGCATTTACGACTACTGAGGCTGGTAATTACCTAGTATGTTTCTGGTTGTCTGACCACAAACATGAAGCTGGCAATGAGATAAGCGTCAACCTTGATTGGAGAACTGGTATTGCAGCCAAGGATTGGGAATCAGTTGCAAAAAAAGAGAAGATTGAGGGTGTTGAACTCGAGCTGAGGAAACTGGAGGGGGCAGTTGAAGCTATTCATGAAAATCTACTCTATCTCAAGGACAGAGAAGCAGATATGAGGACAGTGAGCGAGAGGACAAACGCACGAGTTGCGTGGTACAGCGTCATGTCCTTGGGCGTGTGCATTGCTGCTTCTACTTTACAAATATGGTACTTGAAGCGATTCTTTCAGAAGAAAAAACTTATTTAG

Protein sequence

MRWEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSHSPTISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDWRTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARVAWYSVMSLGVCIAASTLQIWYLKRFFQKKKLI
Homology
[Close]
BLAST of Cucsat.G15569 vs. ExPASy Swiss-Prot
Match: Q6IDL4 (Transmembrane emp24 domain-containing protein p24delta3 OS=Arabidopsis thaliana OX=3702 GN=At1g09580 PE=1 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.9e-46
Identity = 86/131 (65.65%), Postives = 106/131 (80.92%), Query Frame = 0 

Query: 10  FLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVA-DHSHSPTISIKV 69
           FLL F    ++    ++WL++PP+GTKCVSEEIQ+NVVVLADY++++ DH   PTIS+KV
Sbjct: 15  FLLLFLVPVMIPVGEAVWLDVPPTGTKCVSEEIQSNVVVLADYLIISEDHEVMPTISVKV 74

Query: 70  TSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDWRTGIAAKD 129
           TSPYGNNLH+ ENVTHGQFAFTT E+GNYL CFW +D K      +S+N+DWRTGIAAKD
Sbjct: 75  TSPYGNNLHNMENVTHGQFAFTTQESGNYLACFW-ADEKSHGNKNVSINIDWRTGIAAKD 134

Query: 130 WESVAKKEKIE 140
           W S+AKKEKIE
Sbjct: 135 WASIAKKEKIE 144

[Close]
BLAST of Cucsat.G15569 vs. ExPASy Swiss-Prot
Match: Q8RWM6 (Transmembrane emp24 domain-containing protein p24delta5 OS=Arabidopsis thaliana OX=3702 GN=At1g21900 PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.1e-41
Identity = 86/134 (64.18%), Postives = 104/134 (77.61%), Query Frame = 0 

Query: 9   LFLLCFFATDLLRTAHSIWLNLPPS-GTKCVSEEIQTNVVVLADYVVVADHS--HSPTIS 68
           L ++ FF T  +    +IWL +P + GTKCVSEEIQ+NVVVLADY VV +H+  ++P +S
Sbjct: 13  LTVVLFFLT--VNYGEAIWLTIPTTGGTKCVSEEIQSNVVVLADYYVVDEHNPENTPAVS 72

Query: 69  IKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDWRTGIA 128
            KVTSPYGNNLHH ENVTHGQFAFTT EAGNYL CFW+ D  H   N I++ +DW+ GIA
Sbjct: 73  SKVTSPYGNNLHHQENVTHGQFAFTTQEAGNYLACFWI-DSSHHLANPITLGVDWKMGIA 132

Query: 129 AKDWESVAKKEKIE 140
           AKDW+SVAKKEKIE
Sbjct: 133 AKDWDSVAKKEKIE 143

[Close]
BLAST of Cucsat.G15569 vs. ExPASy Swiss-Prot
Match: Q9FVU0 (Transmembrane emp24 domain-containing protein p24delta4 OS=Arabidopsis thaliana OX=3702 GN=CYB PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-37
Identity = 75/140 (53.57%), Postives = 103/140 (73.57%), Query Frame = 0 

Query: 1   MRWEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVA-DHS 60
           M+ +++    LL      L     ++WL +P +G+KCVSEEIQ+NV+VLADY+V++ +HS
Sbjct: 1   MKKKMIPTTILLSALIFSLSPICEAVWLTVPHTGSKCVSEEIQSNVIVLADYLVISEEHS 60

Query: 61  HSPTISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLD 120
             PT+S+KVT+PYG  LHH EN T+GQFAFTT E+G YL CF  +D K     + S+N+D
Sbjct: 61  IFPTVSVKVTAPYGTVLHHRENTTNGQFAFTTQESGTYLACF-EADAKSHGNKDFSINID 120

Query: 121 WRTGIAAKDWESVAKKEKIE 140
           W+TGIAAKDW+S+A+KEKIE
Sbjct: 121 WKTGIAAKDWDSIARKEKIE 139

[Close]
BLAST of Cucsat.G15569 vs. ExPASy Swiss-Prot
Match: F4J4Y0 (Transmembrane emp24 domain-containing protein p24delta6 OS=Arabidopsis thaliana OX=3702 GN=At3g10780 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 6.0e-29
Identity = 62/119 (52.10%), Postives = 81/119 (68.07%), Query Frame = 0 

Query: 25  SIWLNLPPSGTKCVSEEIQTNVVVLADYVVVAD--HSHSPTISIKVTSPYGNNLHHSENV 84
           +IWL +P SG +CV EEIQ NVVV+ DY+ + D      PT+ ++VTSPYG  L+   NV
Sbjct: 26  AIWLTVPESGERCVYEEIQANVVVVLDYICIDDAFTQLGPTLDVRVTSPYGKELYKIANV 85

Query: 85  THGQFAFTTTEAGNYLVCFWL--SDHKHEAGNEISVNLDWRTGIAAKDWESVAKKEKIE 140
           THGQ AFTT+E+G +L C  +      H   + + V+LDW+ GI AKDW+SVAKKEKIE
Sbjct: 86  THGQAAFTTSESGTFLACLAMHHDQSHHSVNSSVIVSLDWKMGIRAKDWDSVAKKEKIE 144

[Close]
BLAST of Cucsat.G15569 vs. ExPASy Swiss-Prot
Match: Q9LQY3 (Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana OX=3702 GN=At1g26690 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.5e-24
Identity = 58/139 (41.73%), Postives = 84/139 (60.43%), Query Frame = 0 

Query: 7   LPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSHSPT--- 66
           L L  +  F     + + S+   L    TKC+SE+I++N + +  Y VV  +   P+   
Sbjct: 6   LNLCTILLFLAISSQVSQSLHFELQSGRTKCISEDIKSNSMTVGKYTVVNPNEAHPSPQS 65

Query: 67  --ISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDWR 126
             ISI+VTS YGN  HH+E+V  GQFAFT  E+G+Y+ C+   DHK E    +S++ DWR
Sbjct: 66  HKISIRVTSSYGNTYHHAEDVESGQFAFTAVESGDYMACYTAVDHKPEV--TLSIDFDWR 125

Query: 127 TGIAAKDWESVAKKEKIEV 141
           TG+ +K W SVAKK ++EV
Sbjct: 126 TGVQSKSWSSVAKKSQVEV 142

[Close]
BLAST of Cucsat.G15569 vs. NCBI nr
Match: XP_004149958.1 (transmembrane emp24 domain-containing protein p24delta3 [Cucumis sativus] >KGN57563.1 hypothetical protein Csa_010706 [Cucumis sativus])

HSP 1 Score: 288 bits (738), Expect = 5.44e-97
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0 

Query: 1   MRWEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60
           MRWEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH
Sbjct: 1   MRWEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60

Query: 61  SPTISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDW 120
           SPTISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDW
Sbjct: 61  SPTISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDW 120

Query: 121 RTGIAAKDWESVAKKEKIE 139
           RTGIAAKDWESVAKKEKIE
Sbjct: 121 RTGIAAKDWESVAKKEKIE 139

[Close]
BLAST of Cucsat.G15569 vs. NCBI nr
Match: KAA0039064.1 (transmembrane emp24 domain-containing protein p24delta3-like [Cucumis melo var. makuwa] >TYJ99742.1 transmembrane emp24 domain-containing protein p24delta3-like [Cucumis melo var. makuwa])

HSP 1 Score: 279 bits (714), Expect = 2.01e-93
Identity = 136/139 (97.84%), Postives = 137/139 (98.56%), Query Frame = 0 

Query: 1   MRWEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60
           MR EVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH
Sbjct: 1   MRREVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60

Query: 61  SPTISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDW 120
           SPT SIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSD+KHEAGNEISVNLDW
Sbjct: 61  SPTFSIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDYKHEAGNEISVNLDW 120

Query: 121 RTGIAAKDWESVAKKEKIE 139
           RTGIAAKDWESVAKKEKIE
Sbjct: 121 RTGIAAKDWESVAKKEKIE 139

[Close]
BLAST of Cucsat.G15569 vs. NCBI nr
Match: XP_008456081.1 (PREDICTED: transmembrane emp24 domain-containing protein p24delta3-like [Cucumis melo])

HSP 1 Score: 279 bits (714), Expect = 2.46e-93
Identity = 136/139 (97.84%), Postives = 137/139 (98.56%), Query Frame = 0 

Query: 1   MRWEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60
           MR EVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH
Sbjct: 1   MRREVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60

Query: 61  SPTISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDW 120
           SPT SIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSD+KHEAGNEISVNLDW
Sbjct: 61  SPTFSIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDYKHEAGNEISVNLDW 120

Query: 121 RTGIAAKDWESVAKKEKIE 139
           RTGIAAKDWESVAKKEKIE
Sbjct: 121 RTGIAAKDWESVAKKEKIE 139

[Close]
BLAST of Cucsat.G15569 vs. NCBI nr
Match: XP_038878125.1 (transmembrane emp24 domain-containing protein p24delta3-like isoform X2 [Benincasa hispida])

HSP 1 Score: 270 bits (690), Expect = 2.75e-90
Identity = 130/139 (93.53%), Postives = 135/139 (97.12%), Query Frame = 0 

Query: 1   MRWEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60
           MR EVVLPLFLLCFFA DL+RTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADH+H
Sbjct: 1   MRREVVLPLFLLCFFAMDLVRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHTH 60

Query: 61  SPTISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDW 120
           SPTIS+KVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWL+DH H+AG EISVNLDW
Sbjct: 61  SPTISVKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLTDHTHQAGIEISVNLDW 120

Query: 121 RTGIAAKDWESVAKKEKIE 139
           RTGIAAKDWESVAKKEKIE
Sbjct: 121 RTGIAAKDWESVAKKEKIE 139

[Close]
BLAST of Cucsat.G15569 vs. NCBI nr
Match: XP_038878124.1 (transmembrane emp24 domain-containing protein p24delta3-like isoform X1 [Benincasa hispida])

HSP 1 Score: 270 bits (690), Expect = 1.11e-89
Identity = 130/139 (93.53%), Postives = 135/139 (97.12%), Query Frame = 0 

Query: 1   MRWEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60
           MR EVVLPLFLLCFFA DL+RTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADH+H
Sbjct: 1   MRREVVLPLFLLCFFAMDLVRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHTH 60

Query: 61  SPTISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDW 120
           SPTIS+KVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWL+DH H+AG EISVNLDW
Sbjct: 61  SPTISVKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLTDHTHQAGIEISVNLDW 120

Query: 121 RTGIAAKDWESVAKKEKIE 139
           RTGIAAKDWESVAKKEKIE
Sbjct: 121 RTGIAAKDWESVAKKEKIE 139

[Close]
BLAST of Cucsat.G15569 vs. ExPASy TrEMBL
Match: A0A0A0L744 (GOLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G214030 PE=3 SV=1)

HSP 1 Score: 288 bits (738), Expect = 2.63e-97
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0 

Query: 1   MRWEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60
           MRWEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH
Sbjct: 1   MRWEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60

Query: 61  SPTISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDW 120
           SPTISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDW
Sbjct: 61  SPTISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDW 120

Query: 121 RTGIAAKDWESVAKKEKIE 139
           RTGIAAKDWESVAKKEKIE
Sbjct: 121 RTGIAAKDWESVAKKEKIE 139

[Close]
BLAST of Cucsat.G15569 vs. ExPASy TrEMBL
Match: A0A5A7T6E9 (Transmembrane emp24 domain-containing protein p24delta3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold252G00180 PE=3 SV=1)

HSP 1 Score: 279 bits (714), Expect = 9.71e-94
Identity = 136/139 (97.84%), Postives = 137/139 (98.56%), Query Frame = 0 

Query: 1   MRWEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60
           MR EVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH
Sbjct: 1   MRREVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60

Query: 61  SPTISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDW 120
           SPT SIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSD+KHEAGNEISVNLDW
Sbjct: 61  SPTFSIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDYKHEAGNEISVNLDW 120

Query: 121 RTGIAAKDWESVAKKEKIE 139
           RTGIAAKDWESVAKKEKIE
Sbjct: 121 RTGIAAKDWESVAKKEKIE 139

[Close]
BLAST of Cucsat.G15569 vs. ExPASy TrEMBL
Match: A0A1S3C1Z4 (transmembrane emp24 domain-containing protein p24delta3-like OS=Cucumis melo OX=3656 GN=LOC103496123 PE=3 SV=1)

HSP 1 Score: 279 bits (714), Expect = 1.19e-93
Identity = 136/139 (97.84%), Postives = 137/139 (98.56%), Query Frame = 0 

Query: 1   MRWEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60
           MR EVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH
Sbjct: 1   MRREVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60

Query: 61  SPTISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDW 120
           SPT SIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSD+KHEAGNEISVNLDW
Sbjct: 61  SPTFSIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDYKHEAGNEISVNLDW 120

Query: 121 RTGIAAKDWESVAKKEKIE 139
           RTGIAAKDWESVAKKEKIE
Sbjct: 121 RTGIAAKDWESVAKKEKIE 139

[Close]
BLAST of Cucsat.G15569 vs. ExPASy TrEMBL
Match: A0A6J1FSD1 (transmembrane emp24 domain-containing protein p24delta3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447721 PE=3 SV=1)

HSP 1 Score: 261 bits (668), Expect = 3.00e-87
Identity = 123/139 (88.49%), Postives = 132/139 (94.96%), Query Frame = 0 

Query: 1   MRWEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60
           MR EVVLPLF+LCFFA DL+RT HSIWLNLP SGTKCVSEEIQTNVVVLAD+VVVADH+H
Sbjct: 1   MRREVVLPLFVLCFFAADLVRTGHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVADHTH 60

Query: 61  SPTISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDW 120
           +PTIS+KVTSPYGNNLHHSEN+THGQFAFTT+E GNYL CFWL+DHKHEAG EISVNLDW
Sbjct: 61  APTISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEISVNLDW 120

Query: 121 RTGIAAKDWESVAKKEKIE 139
           RTGIAAKDWESVAKKEKIE
Sbjct: 121 RTGIAAKDWESVAKKEKIE 139

[Close]
BLAST of Cucsat.G15569 vs. ExPASy TrEMBL
Match: A0A6J1J3N5 (transmembrane emp24 domain-containing protein p24delta3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481506 PE=3 SV=1)

HSP 1 Score: 260 bits (665), Expect = 8.60e-87
Identity = 122/139 (87.77%), Postives = 132/139 (94.96%), Query Frame = 0 

Query: 1   MRWEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60
           MR EVVLPLF+LCFFA DL+RTAHSIWLNLP SGTKCVSEEIQTNVVVLAD+VVVADH+H
Sbjct: 1   MRREVVLPLFVLCFFAADLVRTAHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVADHTH 60

Query: 61  SPTISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDW 120
           +PTIS+KVTSPYGNNLHHSEN+THGQFAFTT+E GNYL CFWL+DHKHEA  E+SVNLDW
Sbjct: 61  APTISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEASTEVSVNLDW 120

Query: 121 RTGIAAKDWESVAKKEKIE 139
           RTGIAAKDWESVAKKEKIE
Sbjct: 121 RTGIAAKDWESVAKKEKIE 139

The following BLAST results are available for this feature:
BLAST of Cucsat.G15569 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6IDL41.9e-4665.65Transmembrane emp24 domain-containing protein p24delta3 OS=Arabidopsis thaliana ... [more]
Q8RWM61.1e-4164.18Transmembrane emp24 domain-containing protein p24delta5 OS=Arabidopsis thaliana ... [more]
Q9FVU01.2e-3753.57Transmembrane emp24 domain-containing protein p24delta4 OS=Arabidopsis thaliana ... [more]
F4J4Y06.0e-2952.10Transmembrane emp24 domain-containing protein p24delta6 OS=Arabidopsis thaliana ... [more]
Q9LQY31.5e-2441.73Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana ... [more]
BLAST of Cucsat.G15569 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004149958.15.44e-97100.00transmembrane emp24 domain-containing protein p24delta3 [Cucumis sativus] >KGN57... [more]
KAA0039064.12.01e-9397.84transmembrane emp24 domain-containing protein p24delta3-like [Cucumis melo var. ... [more]
XP_008456081.12.46e-9397.84PREDICTED: transmembrane emp24 domain-containing protein p24delta3-like [Cucumis... [more]
XP_038878125.12.75e-9093.53transmembrane emp24 domain-containing protein p24delta3-like isoform X2 [Beninca... [more]
XP_038878124.11.11e-8993.53transmembrane emp24 domain-containing protein p24delta3-like isoform X1 [Beninca... [more]
BLAST of Cucsat.G15569 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7442.63e-97100.00GOLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G214030 PE=3 S... [more]
A0A5A7T6E99.71e-9497.84Transmembrane emp24 domain-containing protein p24delta3-like OS=Cucumis melo var... [more]
A0A1S3C1Z41.19e-9397.84transmembrane emp24 domain-containing protein p24delta3-like OS=Cucumis melo OX=... [more]
A0A6J1FSD13.00e-8788.49transmembrane emp24 domain-containing protein p24delta3-like isoform X2 OS=Cucur... [more]
A0A6J1J3N58.60e-8787.77transmembrane emp24 domain-containing protein p24delta3-like isoform X2 OS=Cucur... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 138..158
NoneNo IPR availablePANTHERPTHR22811:SF127EMP24/GP25L/P24 FAMILY PROTEINcoord: 5..212
IPR009038GOLD domainSMARTSM01190EMP24_GP25L_2coord: 25..207
e-value: 3.2E-60
score: 216.1
IPR009038GOLD domainPFAMPF01105EMP24_GP25Lcoord: 28..207
e-value: 1.4E-49
score: 168.5
IPR009038GOLD domainPROSITEPS50866GOLDcoord: 35..147
score: 15.505542
IPR015720Transmembrane emp24 domain-containing proteinPANTHERPTHR22811TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEINcoord: 5..212

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G15569.T1Cucsat.G15569.T1mRNA
Cucsat.G15569.T4Cucsat.G15569.T4mRNA
Cucsat.G15569.T3Cucsat.G15569.T3mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process GO:0007030 Golgi organization
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0030134 COPII-coated ER to Golgi transport vesicle
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005793 endoplasmic reticulum-Golgi intermediate compartment
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane