Cucsat.G15567 (gene) Cucumber (B10) v3

Overview
NameCucsat.G15567
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionUCR_hinge domain-containing protein
Locationctg2009: 1704073 .. 1708416 (+)
RNA-Seq ExpressionCucsat.G15567
SyntenyCucsat.G15567
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAGAGTTCCTAGTTTCCTCTCAGATTCGTGTTTCAGCTTCCAAAGGTATGAGTTTTTTAGCCCAAGAATTCTTCCCTTGTTTTTAACTTTTTTTATTTGTTTCTAAGCTTTTTCTTTATTTTTTTTTATTTTTTATTCTTGTTCGATTTTTATTATCAGATCCAACATTCATCGATCGTGTATGTTTTGTATTTTCCGGTGCTTTTGATTTCTTCTATCATTTGGGATCGTTTGCTCTGAATTTTTCCAAGAAATCGATGGAGTATTATGTTTTTTTTGTTTTACAATATTCATTTCTTTCTTCTACCTCTCAGTAGTCGTTTGTATTTGAGGGTTTTTCCCCTCTTGTTGCATTATATGATCTGATTCTTGTTTTTGATAGACATTCAACTTTCCAATTTTGAAATGGGGGGTTTCCATTTATTTGGAATGGGATCAAGTTTAACGAGTATTATTACGTGGGAACAAATCGTTGGATTGAAAGCAATTGCTTTCCCTTTGGTCAAAATTGCAAGGTTCTCCATATTTCAGAGTATCTTCCTTTTTTAATGTTTCATTTCTGAACCTGAAATCTAATCTCATGGCAACGACGGTCTTAAAAGATTGAGTTTAGCTGGAGACTCGTTAATTACAAATCTCTTTTTTTTTAAAAAAAAATATATATATATATATATTTTTTTTCTGCCATTCCTCAAATGAATGCTTGAGTTAAAGGCATGGACATCTCGAATTTGTGGAATAAAGTTCATGGTTTTGGTGTCAGTATTTTTGTACAAACTAAAACAATGACCTTTTTCTTTATTCATATTGATGCTTAATTTTAATTGTTTTTCAGGTTTTCTTGCGTGCTCTTTCCCTCCAAGTCAGTACTCTTTGTTAGCCATGTGAGTATCCCCCTTTTCTTTCCTTTCTGTTTTACCATGTACTATTATCTTCTTGCCTTTTTATTTCTTACACAATGAACTTTTTTATTGTCTGCTACATTACTATAGATTTGTATCCCTGTAGTCAAGTGCTGTTTTGTTAGCGTTTATATTTTTATTTGGTATTCATAAATTTCTAAGCCACTATTCTTCCTTTGTAAGTATAGCTCATTGCTGTCAGAAGAGTTATTAAGGTGAACTGTAAAGCACATACTGGGGCAAACTTTTCTCCGAATATTGATATTTTGAGCAACTATCATGACAAGTATCATCTCTCTGTTAGGATCTTACTTGAACAGGATCTGTTCTATAGGTAGTAAACTATGACCTTGAGTTCTAAGGAGACAAGTATCATCTCCCTGTTGCTGCAATTGAAAAGATGAAATATAAAAGCGCTGATAAATTTTGCACACATTGGAAAGAATCGGTTTGCTGAAGATTTAGTTTCAATGAGACAGTAGATGTGCTAGCATTTAGTAGATGTAGCATTTTGTCCGCTTGGTGATGTGATCAACATTTTTGGAGATTATTAAGGTTTAATAATCAGCAGGATAGTTGCATCATTGCATGTCTTCTCCATACCCTCTATCTTTATCTTTCATAATGTTGAAGATTATTTGTTTTGATGTCAACTTATCTATGTTTCCTTGATTCTTCATAATATGTAGGGCGGATGAAGAGCCTGTTGATCAGAAGAGGTATCTTGAAGAAGCTTGCAAACCCAAGTGTGTGAAACCACTACTTGAATATCAGGTACATTGTGTTTTATTGATACTTTGTTGTGGGGGATTGATGAGTCTTAGTGAAGTTGGATATACTAATTTCTTCAGTTGTTAGACTTGTATTCATTATTCATTCTTTTTTTCATAATTACTCAACTTTAAAAGTCTGGTCTCATGAGTAGGTATGTTTCTATTCTTTTATTTGGTTAGAAATTAATCTGTCACTATGCTAGATTGAAGATTTTGCATCTCTCCAGTGAATGCGTTCATTATAAATGAGTAGATTTTCTTGTAGCTTCAAACTTTTCTTTGTGACAGAACGGGCAGCCACTGGCCCACCATTGACTCAGTCTTATAGGTCTTTCTGGAGAATAACGAAGCTTAGTTACAGGAGTGAGTTTGATATTAGGTACTTTCTGACAAGACTTGGGCTTCGGCTTGTCATGGTGAATACCAAAATACCATCCTTCAAGAGCAGGAACTGATGGATAGAGGGTAAAGAGAAAAAAAAATGAAAAGGAAGTTAGAATTGGATTTGGCTCCACCTTTGTTTCTGAATTTTCTTTTGGAAAAAACCAATTGATGTCACCTGGTCCTGATCCCGATCAATAAAGCCGCGCCTCCAGGATAAAGTCTTTCTTTGGGCTGTATGATATTTGGAACATTATTTGGATATTGTGGGCATATTAATGATTTAACTAATAAGTGGTCGTAAGTAAATGAACTTAATAATAAAACAAACAGAATGAAGTCGCTCAAATGCTAAGTAGCATCATTTAAATTCTCATTCTTTTAGTAATTCCAACAACATATTTCATCATTCTGTTTCAATTCTGGGTCCTATCTTGCCATTAAAAGTAACAGGAAGAAAGTTGCTAGTGCAACCAGTTTTTTGGTTTTGGATGAGAATCTTTTCACCTGACAAGCTTATTTTTGGTCTCCTTATGTTGGGTTTTCTTTGTATGCTCTTGTATATTCTTTGTTAAGAAGTTGTTAAGAAGCCTAGTTTTTTTGTCAAAAGCTGTTAGTGCAACCTTACGATGAACACAATTTGCCCCTGTGCAATTATGGTGAAAGATCCTTGCTTAGCATGGCAATCATTTAGGTCATGGAGGCAACAATAACCTTCCTTGACAAATTGTCTTAGCTCCCTTTCGTGAATTCAAATCAATATTGAGGACAAAGATATCCTTTTGCCAAAGCTTTAGATATCTCATGTTTCACTGATTCTAGTTGATACTGTGCTTTGGGGTTCAAGTTGACTTGGTCATTCGACATCCTTTTATTGTGAGTTTGATGAATCTCAAAACATGTGTTGGACTTCTTTTTCCTAGGATGCTAGACCTTACCAAATTTGGAGAATTGTTTATTTTGACCTTCATATATGACCTGTTTCCCCTAGTTTTTATGTTTTCCTCTGGATTTTGATTTTGAATACCACTTGTAATTACTCTACAGGTTTAATTTTGTGTAATTTCGTGTAACTGGAGTTCTTTTAGTTGAGCTCCCCATTCTTTTTTCCTATGAGAGTTGAGCTTCCGACCCTCATTTGTTGATCAGTGGTAAAAAAGGAAAGTCTTTCAGTAACTAATTAAGAGGTTATAGGTTGACCCATTGGAGACACTCTCAACCATCATAGGTTGACCTAGTGGTTCAATTCATGGTGGACACTTAGATAGGAATTAATTTTCTGAGTTTTTTTGAAACCCAAATGATGTAGGGTATGTAGGGTCAAGCGGGTTGTCCCATTAGATTAGTTGAGATGCGCTTAAGCTAACATGGACACTCGAAGATATCAAAAAAGGAAAAAAAAGAAAAAGAAAAGAGAGTTGAGCTCCCAAAAATATGTATTTTCCCTGAAAATTGGCAAAGTTTATTTAGTCTCTCATATGAGTTTCAGATGATGTCGTTGCTAATATTTTAGTTTATTAACCATGTCTGAGCAGATTCAAATTCTATCAATAGTATAAAGATAAGGTAAAAATGATGGTTATTGTCTTTCCATGTCATAGGCATGCGTGAAGAGAATCCAAGGAGATGACAGTGGTCATAAGCATTGCACTGGACAATATTTTGATTACTGGTCTTGCATTGACAAATGTGTAAGTAGCTCTTGGTTCTGTTAGAAACTAAATTGTAGAAAAAGTTGTACACATAAACAAGTTCATTTTAGAAAAAAAAACTGAAATAATAACCTTGGAACTAACTTGAAATACACTTTTTTCTTGCAGGTTGCACCAAAACTATTGACGAAACTAAAGTAATGGGAGAGTTGTTAGGGATGTGGGGATCCTATCCTTTTGCTTTTGCAGCATTTTTCTGATTTTTTATGCAATGTCGTTTTGTGAACTTGATTTTTGCATCAACAAAAAATGCCAAGGGCTGTGAAATTTTATAAAAACTGCCAGACCTTTAACCATGGTCAATAAGAAAGGAGATTGGATTCACGTTTGGAGATTTTGAATAACTTCTTCCTTCAATTTTATGGTTGCTTTATATAAACATTAGTGATCGATGAATTCTGTAGTTGTTTCAGAAAACAAATGTTTAGTAAGGTGTGATCCATTTTTTAGTTTGCTGTTTCTTTGATTTATAAAAAATGGCTGTGTTGTTTGAGAATAAGTAGCCGGTTGAGGTTCAATTTGGCAGAAGTAGATCACTCTTTTGGGTCTAATACCTGTCTTCATATCCTAACTTG

Coding sequence (CDS)

ATGGGGGGTTTCCATTTATTTGGAATGGGATCAAGTTTAACGAGTATTATTACGTGGGAACAAATCGTTGGATTGAAAGCAATTGCTTTCCCTTTGGTCAAAATTGCAAGGTTTTCTTGCGTGCTCTTTCCCTCCAAGTCAGTACTCTTTGTTAGCCATCTCATTGCTGTCAGAAGAGTTATTAAGGTGAACTGTAAAGCACATACTGGGGCAAACTTTTCTCCGAATATTGATATTTTGAGCAACTATCATGACAAGTATCATCTCTCTGTTAGGATCTTACTTGAACAGGATCTGTTCTATAGGTAG

Protein sequence

MGGFHLFGMGSSLTSIITWEQIVGLKAIAFPLVKIARFSCVLFPSKSVLFVSHLIAVRRVIKVNCKAHTGANFSPNIDILSNYHDKYHLSVRILLEQDLFYR
Homology
[Close]
BLAST of Cucsat.G15567 vs. NCBI nr
Match: KAE8650514.1 (hypothetical protein Csa_011326 [Cucumis sativus])

HSP 1 Score: 61.2 bits (147), Expect = 2.02e-09
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 9  MGSSLTSIITWEQIVGLKAIAFPLVKIARFS 39
          MGSSLTSIITWEQIVGLKAIAFPLVKIARFS
Sbjct: 1  MGSSLTSIITWEQIVGLKAIAFPLVKIARFS 31

[Close]
BLAST of Cucsat.G15567 vs. ExPASy TrEMBL
Match: A0A0A0L6I2 (UCR_hinge domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G212480 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.35e-15
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 1  MGGFHLFGMGSSLTSIITWEQIVGLKAIAFPLVKIAR 37
          MGGFHLFGMGSSLTSIITWEQIVGLKAIAFPLVKIAR
Sbjct: 1  MGGFHLFGMGSSLTSIITWEQIVGLKAIAFPLVKIAR 37

The following BLAST results are available for this feature:
BLAST of Cucsat.G15567 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G15567 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650514.12.02e-09100.00hypothetical protein Csa_011326 [Cucumis sativus][more]
BLAST of Cucsat.G15567 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6I22.35e-15100.00UCR_hinge domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G212480 P... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G15567.T4Cucsat.G15567.T4mRNA