Cucsat.G15566 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAACGACCAAGAGAGAAAATCGTACTTTTGGAGTCTGAGGATGAGAGGAAAGAAAAAGAAAAAGAAAAAGAAAAAAGCGGTCCTTGAAAGGGTTTTTGGCGAAGCGAAACACTGGAACTTGGAAGTCTCTACTTTCTTCTTCTTCCTCCCAAGTTCCTTACACAACATTCTTCCAATGGGAACTAACGCCGCTGACGTCGAGAAAACGGAGGACGATCTTCGCAAAGAGATCGATGAGCTTCAACGTCAACAACGGGAGGTCCTTTTTCTTCTTCATCTTCACTTTTCTTCTTTCCTTTTTCCCTGATGCATTGCTTCTTTTTCAGATTACAGAACGCCTTCGTGATCCTCGCGGACTCCGGAGAGGTGGATTTCCTGGACCTGGCCCAAGAAACTTCGCCGCTAATGGACCACGTCGGGGATTTGTTCGACCTGTAACATTGTCTCCTCTTTCTCTCTCTATATTATTTATCTACTCGTTAGCATTCTTGTTATATTCCTGCCTCATGAAGCTTGGTTTTAATTTTAATTGCATCCTTTTCACAATTTGGGTGGAAAACAATTGAGGATATGCTGATAATTGGAGTTTTACGCTCTAGGGGGAAAGAAATGATGCTGAAGACCAGCCTCCTGCTAAACGGCGGCTATCTTCTGCTGTTGTCAAGGTGAGACTCAAATTTTGTTTTTGTTTTTGGGTTTCTATCTTGGGGTGTTCTTAACATTTTTTTTCTTTAATGTTTCTCTAATCTCGTTTGCGAAAAGAATTTTCTATGGGTTCTTATTGTTTCTTGCTAGAATTATGAATTATGCTAGATAACTTAATGAACATGAAAGATGGGCTTGGTTGGCCTCATAATTTTCTTCAAACCATGAGTGCCATGTTGTATGTACATTTGCATAGTTTAACATTTACCCTTTTTATCTTTACTTCTAAAATAAATATTGGAGCATAGATGGCGGAGGATGGGGAGATAAATGAAGAAGCTGAAGGAAAGGATGCAGTGAAGGATACATCTCGGGAAGAAACTTCTGGAAGTGATGCAGTCTTCCAGAACGATGCAAGACAAAATCATTTGCGGCAAAGTGGTTCGTTTAGATTGGATGGAAATAAAAGAGCTAGGATGGTAATTTCCATGTATACTGTCTTTTAATCATCTGCACAATGCTTTGGTTTGACAACCTGCAGGCAGAAGTCTTAAAGCTCTATTTTGTAATTTATGTCAGGATATTGATATTCCAGCTGCTGAGAATGTTCCAAGAATATTGCCTAAGAACGAGGATCCTAGCTTAGTTAGCAGGAACAAGAGAATGCTGGGTCAGCTTTTGGGAACATTGGAGGTATGTGTGAAATGATTGATTGGGTTAAATTGGTCATGTGTTGCATCATGTTTGCATCTTCAATTCTCTAATCTTTGCACTTGACACATGGGAGGAAAGGGTAGAAAATATATATTTCATGTTTCCAATCTTTTAGTTAAAATATTTGTCCTCACCATTGAGCATTTACTCATATTGGCAAATATAGTCCAGAATAGAAGTATATAGTGGCTTGCATTCGATTTTACAGACACAGGTAAATAGATATTTCTGAATAATCAATTGAATGCAATCCACGGAGAACTCAAAAGGCAGAGAGAATAGGCTAGATAAATAAATTCTAAGGTGAAAATCTAGATTTTATGTTGATTGGTAACTTAAGTAGATGCATGTACTGATGTACATTTAAAATTTTGCTTTACTCGCTTAAAAGAGATCATGAATAAACTACAATGCATTGACTTTTTGTAGTAGGTCTTTAAGTTTTATTTTGTTTGTCTGGGTTGTCCAGGTTCTCTACCATTTATGTTGCTAAAAACCAAATTTCCCAAAGAGCTGCTATATCATAATTTTCTATCATTAGCCTAGTTTCAAAAATTGTGTGTGTGTGTGTGTGTTTTTTGTGTGTTGGTTGGGAATGGGGGGTTGTGGCTTCAATGTGGCATTGTATTTCCTAGTTGTGGTGCTTATCCACTTTATTTGTATATATCTTCAGAAATTCAGGAAGGAAGACAAGCAACTCTCAGGAACGGAAGCTTTTATGAGAAGATCGGATTCCTTACAAAGAGTGAGTTATTATTTGCTTTTTTTTTAAAAAAAGATTTAACTTCCTAGTATGTTTGAAGTTGACTTTCCCTTTTGATAATTCTTAAAGGCCGAGCAAAGAGCACGAGAGGAAAGCGAAAGATTGAGGCAACAAGAGCGTGAACAGATTGCAGAGAAACGAAAGAGAGATCTGGTCTGTATTTTAATGAAAGACTAAATTAGATAAATATCTATGAGGTTTGAATCTACAATTATTGCTTTCTTAACCACTCTAATTTTCACTTCTTTAGATGCTTAGAGCTCGCGTGGCTGCCAAGGCAGAAGAAAAGAAGTTGGAATTACTTTTTCTTCGATGGAGCGAGCACCATAAGAAACTTTGCAATTTTATAAGGTCTGGTTATGTTTAATTTTTGGTGTTGTCACTTCTGAGATTACCAAGCTATATATTGATCTTACTTTCCTATTCATGCAGGTTATTTTTAATTTTGGTCCAAAAGTGTCCATATTCACATTTTATTGAGACAAAGATAAGTTTCTGTTCATGAATAGTGCTGAACTAAATTCATGGGTTTTGATACAAAAAGATATTAAAGAATACTGACCTTACTAGTAGATGTTTCCTTTTATGCTGGAACTTAAATTGCATTTGAAGGTTTTCCCCCTTCTAATAGAATTCCCCTTTGAGTTTTGAGGGTACTTTTTCACGAAGTTTGTATTTTCCAGGACAAAGACTGAGCCTTCAATTTATTATTTGCCAAATAAACCATTGGACGAGGATGCAACCTTGGCTGAGCAGCAAAGAGACGAGGTTTGTGCCTTTTAGTTTGATATTTTTCTTGAAAAAGGCAATTTTGGTTAGAGATCTTCTGGAAATCAACTGCCTCAACTTTTGAGAACCTACTACATTTGAATAATCCTATCCAAGTTGGTTTAGTTTGAATTTAATGTTACTCCCTGTAATTGAATTGGGAGTTTGAATCTGATTATTGTTGAGTTCCATTTGTTATTACTAAGAGAATGGGAAGTGGGACATGTAGGGCCGTTTGGTAATGTTCTCGTTTCCTGTTTCATGTTCCGGTTTTCGGTTTCCTGTTCCGGTTTTCGGTTTCCTGTTCCTTCTTTTTTTAGAACAAGAAACAAGAATATGTTTGATAACTGTTTATGTTTCTTGTTTCTTGAAAAAAAAAAAAGAAACGGAAACAGAAAATGTGTTTGATAACTGTTTTTTGTTTCCTGATTTTCTTTGAAATTTATTTTTTATTTTATTCACATTTAATTCAGTTAAACATCAAACAAAAATATATGTTCTCCATTAAATATAAAAAATAAAATCATCAAACCTAGATATGAAGGTCTTCTTATAATCTTATGGAGAAGTAGATGAAGATTGAGATCTGAAGAATAGTGCTGACCAGAGAAAGACTAAAACCCATGACGTAGAGGAGAACCAAAACTCATGAAAAAGAGAGACAAAAACTCAAGGCTAAAACACAAATCTGGCAAAAACCCACAAATTTGTCGAAAATCCACTGTGAAAACACAATTCATGCAAAGAGGAAGAAGAAAGAGGAAGAAGAAAGAGGAAGAAGAAAGAGGAAGAGGAAAACACAGATCCAGCGAAGAGGAAGACGTCGTGTAGAGGAAGACGATGAGAGGCAAAGAGGAAGGCAACAAAGACGATGAGAGGAAGAGGAAGAGGATGGTTATTTGGAAAAGACGATGGAGATAAGGGGAAGAAAAAGGAAACCACGTGGGGAGTGGTTATTTGGAGAAGAAGATGGAAATAAGAGGAAGAAAAAGGAAATCACAAGAGGAAAATGAAATAGAAAAAGAATTGAAAAGAAGGAAAAGGAAACCAATAAAAAGAATTGAGAAAAAACATAAGGAAACCAATAGAAACAATTGAGAAAAAGAAAAAAGAAACCAATAAAAATAATTGAGAAACGGGAATAGGAGAAACTACTTTTTGGTGTTCCTAATAATTCCTTATAAAATGACAAAAAGTTGGTTTAGTTTGAATTTAATGTTACTCCCTGTAATTGAATTGGGAGTTTGAAACTGATTATTGTTGAGTTCCATTGGTTATTACTAAGAGAATGGGAAGTGAGACATGTGGGGCCGTTTGGTAACGTTCTCATTTCCTGTTTCATGTTTCGGTTTCCTGTTTCTTCTTTTTTTAGAACAAGAAACAAGAATATGTTTGATAACTGTTTATGTTTCTTGTTTCTTGAAAAAAAAAAGAAACGGAAACAGAAAATGTGTTTGATAACTGTTTTTTGTTTCCTGATTTTCTTTGAAATTTATTTTTTATTTTATTCACATTTAATTCAGTTAAACATCAAACAAAAATATATGTTCTCCATTAAACATAAAAAAATAAAATCATCAAACCTAGATATGAAGGTCTTCTTATAATCTTATGGAGAAGTAGATGAAGATTGAGATCTGAAGAATAGTGCTGACGAGAGAAAGACGAAAACCCACGACGTAGAGGAGAACTGAAACTCACGAAAAAGAGAGACAAAAACTCAAGGCTAAAACACAAATCTGACAAAAACCCACAAATTTGTCGAAAATCCACTGCGAAAACACAATTCACGCAAAGAGGAAGAAGAAAGAGGAAGAGGAAAACACAGATCCAACGAAGAGGAAGACGTCGTGTAGAGGAAGACGATGAGAGGCGAAGAGGAAGGCAACAAAGACGATGAGAGGCGAAGAGGAAGGCAACAAAGACGATGAGAGGAAGAGGAAGAGGATGGTTATTTGGAAAAGACGATGGAGATAAGGGGAAGAAAAAGGAAACCACGTGGGGAGTGGTTATTTGGAGAAGAAGATGGAAATAAGAGGAAGAAAAAGGAAATCACAAGAGGAAAATGAAATAGAAAAAGAATTGAAAAGAAGGAAAAAGGAAACCAATAAAAAGAATTGAGAAAAAACATAAGGAAACCAATAGAAACAATTGAGAAAAAGAAAAAAGAAACCAATAAAAATAATTGAGAAATGGGAATAGGAGAAACTACTTTTTGGTGTTCCTAATAATTCCTTATAAAATGAGAAATGTTTCTACTCTTTTTTAGAACAAGAAACATGGAACATTACCAAACACCTTCGTTTCTTGAAAAAAAACAAGAAAGAGGAAACAGGAACATTACCAAACGGGCCCGTAATATGCATAGATATACATCTGTATATACACATTATTTATGTATATATGTATATGTATACACACACATATGTAGTAAAGTGTCACTAAAGGTGAGTTTTTCTGTTGTGGTTTGCATGTTAATGATGCTGGCACTGAATAATTTATTTACATATTGATCTTACAAGTATTTGCCTATTCCCTTATTTTATCACAAAAATACATTTCAGGCTTTTATGGAATGGAAAGCCTCCAGAAGGGAGGAGTTATCTGAGTATCAGAAACAGATAGGAGAACAGTACATTGCAAATGTTGAGAAGGACTTGGAAAGGTGGCAAAATGCTAGGAGGGCAAGAAAAGGAAGTAACGATGTATCGAATTTGCAAGAAACCATGGACAAAGAGTTGGACACTCATAGACTTGAGCATGGTCCAAAGAAAAGGAACATCCCTGGTGGTAGCAACAACGAGGATGAAGATGACGTGGAAGATATTAACGTTGGGGAGGACGACATGATAGATGACGTACTCGATGTTGAAGAAAATGGGCGCAGGGGCGAGGAAACAGCAAAACCTGAAGCTGATGTTGCAAGTCCAAAAGCTGATGATACTGTGCAGTAGAAGCTGTAAGTACGTATTTGATTTCATGTAGTAGTTCTATGTTTGTGTTTGTATCTGTCCTTTGATTTGTCTTACTAGTTTTATTCTTCTTGCTTTTTTTTTTTTAAAAAAATTGATGTTTGTATGTTTTTTTTTTAAATCGTACCAATGGGCTTAATGGGTTCCACACAGTCTTTGATTCTGCTTTTTCAAAGCCTTCACAGAATTGGTAGGATGCTTAGTCACCAAGTTTGTTCAAGCATGACTTGTAAAAATATCTCTACTTCTTTCAAGTAATGACATCAGAAACGTACTTGTGTTGCCATCTATTGAAATATTATATGTCCTTTTCTTTTCCCTTGATTGATTTTGAATATT AACGACCAAGAGAGAAAATCGTACTTTTGGAGTCTGAGGATGAGAGGAAAGAAAAAGAAAAAGAAAAAGAAAAAAGCGGTCCTTGAAAGGGTTTTTGGCGAAGCGAAACACTGGAACTTGGAAGTCTCTACTTTCTTCTTCTTCCTCCCAAGTTCCTTACACAACATTCTTCCAATGGGAACTAACGCCGCTGACGTCGAGAAAACGGAGGACGATCTTCGCAAAGAGATCGATGAGCTTCAACGTCAACAACGGGAGATTACAGAACGCCTTCGTGATCCTCGCGGACTCCGGAGAGGTGGATTTCCTGGACCTGGCCCAAGAAACTTCGCCGCTAATGGACCACGTCGGGGATTTGTTCGACCTGGGGAAAGAAATGATGCTGAAGACCAGCCTCCTGCTAAACGGCGGCTATCTTCTGCTGTTGTCAAGATGGCGGAGGATGGGGAGATAAATGAAGAAGCTGAAGGAAAGGATGCAGTGAAGGATACATCTCGGGAAGAAACTTCTGGAAGTGATGCAGTCTTCCAGAACGATGCAAGACAAAATCATTTGCGGCAAAGTGGTTCGTTTAGATTGGATGGAAATAAAAGAGCTAGGATGGATATTGATATTCCAGCTGCTGAGAATGTTCCAAGAATATTGCCTAAGAACGAGGATCCTAGCTTAGTTAGCAGGAACAAGAGAATGCTGGGTCAGCTTTTGGGAACATTGGAGAAATTCAGGAAGGAAGACAAGCAACTCTCAGGAACGGAAGCTTTTATGAGAAGATCGGATTCCTTACAAAGAGCCGAGCAAAGAGCACGAGAGGAAAGCGAAAGATTGAGGCAACAAGAGCGTGAACAGATTGCAGAGAAACGAAAGAGAGATCTGATGCTTAGAGCTCGCGTGGCTGCCAAGGCAGAAGAAAAGAAGTTGGAATTACTTTTTCTTCGATGGAGCGAGCACCATAAGAAACTTTGCAATTTTATAAGGACAAAGACTGAGCCTTCAATTTATTATTTGCCAAATAAACCATTGGACGAGGATGCAACCTTGGCTGAGCAGCAAAGAGACGAGGCTTTTATGGAATGGAAAGCCTCCAGAAGGGAGGAGTTATCTGAGTATCAGAAACAGATAGGAGAACAGTACATTGCAAATGTTGAGAAGGACTTGGAAAGGTGGCAAAATGCTAGGAGGGCAAGAAAAGGAAGTAACGATGTATCGAATTTGCAAGAAACCATGGACAAAGAGTTGGACACTCATAGACTTGAGCATGGTCCAAAGAAAAGGAACATCCCTGGTGGTAGCAACAACGAGGATGAAGATGACGTGGAAGATATTAACGTTGGGGAGGACGACATGATAGATGACGTACTCGATGTTGAAGAAAATGGGCGCAGGGGCGAGGAAACAGCAAAACCTGAAGCTGATGTTGCAAGTCCAAAAGCTGATGATACTGTGCAGTAG NDQERKSYFWSLRMRGKKKKKKKKKAVLERVFGEAKHWNLEVSTFFFFLPSSLHNILPMGTNAADVEKTEDDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFAANGPRRGFVRPGERNDAEDQPPAKRRLSSAVVKMAEDGEINEEAEGKDAVKDTSREETSGSDAVFQNDARQNHLRQSGSFRLDGNKRARMDIDIPAAENVPRILPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGTEAFMRRSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLCNFIRTKTEPSIYYLPNKPLDEDATLAEQQRDEAFMEWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGSNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINVGEDDMIDDVLDVEENGRRGEETAKPEADVASPKADDTVQ Homology
BLAST of Cucsat.G15566 vs. ExPASy Swiss-Prot
Match: O35691 (Pinin OS=Mus musculus OX=10090 GN=Pnn PE=1 SV=4) HSP 1 Score: 56.6 bits (135), Expect = 6.3e-07 Identity = 72/272 (26.47%), Postives = 128/272 (47.06%), Query Frame = 0
BLAST of Cucsat.G15566 vs. ExPASy Swiss-Prot
Match: Q9H307 (Pinin OS=Homo sapiens OX=9606 GN=PNN PE=1 SV=5) HSP 1 Score: 53.5 bits (127), Expect = 5.3e-06 Identity = 84/329 (25.53%), Postives = 145/329 (44.07%), Query Frame = 0
BLAST of Cucsat.G15566 vs. ExPASy Swiss-Prot
Match: Q5R5X0 (Pinin OS=Pongo abelii OX=9601 GN=PNN PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 5.3e-06 Identity = 84/329 (25.53%), Postives = 145/329 (44.07%), Query Frame = 0
BLAST of Cucsat.G15566 vs. ExPASy Swiss-Prot
Match: P79149 (Pinin OS=Canis lupus familiaris OX=9615 GN=PNN PE=2 SV=3) HSP 1 Score: 50.4 bits (119), Expect = 4.5e-05 Identity = 86/334 (25.75%), Postives = 149/334 (44.61%), Query Frame = 0
BLAST of Cucsat.G15566 vs. NCBI nr
Match: XP_004140691.1 (pinin [Cucumis sativus] >XP_011651249.1 pinin [Cucumis sativus] >XP_011651250.1 pinin [Cucumis sativus] >XP_031738113.1 pinin [Cucumis sativus] >XP_031738114.1 pinin [Cucumis sativus] >XP_031738115.1 pinin [Cucumis sativus] >KGN57548.1 hypothetical protein Csa_011213 [Cucumis sativus]) HSP 1 Score: 630 bits (1624), Expect = 1.82e-225 Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0
BLAST of Cucsat.G15566 vs. NCBI nr
Match: TYK25967.1 (pinin [Cucumis melo var. makuwa]) HSP 1 Score: 625 bits (1612), Expect = 5.11e-225 Identity = 335/338 (99.11%), Postives = 337/338 (99.70%), Query Frame = 0
BLAST of Cucsat.G15566 vs. NCBI nr
Match: XP_016901910.1 (PREDICTED: pinin [Cucumis melo] >XP_016901911.1 PREDICTED: pinin [Cucumis melo] >XP_016901912.1 PREDICTED: pinin [Cucumis melo]) HSP 1 Score: 625 bits (1612), Expect = 1.22e-223 Identity = 335/338 (99.11%), Postives = 337/338 (99.70%), Query Frame = 0
BLAST of Cucsat.G15566 vs. NCBI nr
Match: XP_038902762.1 (pinin [Benincasa hispida]) HSP 1 Score: 602 bits (1551), Expect = 2.46e-214 Identity = 322/339 (94.99%), Postives = 331/339 (97.64%), Query Frame = 0
BLAST of Cucsat.G15566 vs. NCBI nr
Match: XP_022922936.1 (pinin [Cucurbita moschata]) HSP 1 Score: 579 bits (1492), Expect = 2.44e-205 Identity = 313/340 (92.06%), Postives = 327/340 (96.18%), Query Frame = 0
BLAST of Cucsat.G15566 vs. ExPASy TrEMBL
Match: A0A0A0L734 (Pinin_SDK_memA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G209450 PE=3 SV=1) HSP 1 Score: 630 bits (1624), Expect = 8.81e-226 Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0
BLAST of Cucsat.G15566 vs. ExPASy TrEMBL
Match: A0A5D3DQL5 (Pinin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1441G00280 PE=3 SV=1) HSP 1 Score: 625 bits (1612), Expect = 2.47e-225 Identity = 335/338 (99.11%), Postives = 337/338 (99.70%), Query Frame = 0
BLAST of Cucsat.G15566 vs. ExPASy TrEMBL
Match: A0A1S4E1Q0 (pinin OS=Cucumis melo OX=3656 GN=LOC103496147 PE=3 SV=1) HSP 1 Score: 625 bits (1612), Expect = 5.92e-224 Identity = 335/338 (99.11%), Postives = 337/338 (99.70%), Query Frame = 0
BLAST of Cucsat.G15566 vs. ExPASy TrEMBL
Match: A0A6J1E5H2 (pinin OS=Cucurbita moschata OX=3662 GN=LOC111430764 PE=3 SV=1) HSP 1 Score: 579 bits (1492), Expect = 1.18e-205 Identity = 313/340 (92.06%), Postives = 327/340 (96.18%), Query Frame = 0
BLAST of Cucsat.G15566 vs. ExPASy TrEMBL
Match: A0A6J1J351 (pinin OS=Cucurbita maxima OX=3661 GN=LOC111482972 PE=3 SV=1) HSP 1 Score: 576 bits (1484), Expect = 1.95e-204 Identity = 310/340 (91.18%), Postives = 327/340 (96.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|