Cucsat.G15466 (gene) Cucumber (B10) v3

Overview
NameCucsat.G15466
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionRING-type domain-containing protein
Locationctg2009: 6060580 .. 6063323 (-)
RNA-Seq ExpressionCucsat.G15466
SyntenyCucsat.G15466
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACTAATCCCTCTCTCCGGGTTCTTCCTAACATTATTCAACAAAGAAAGCTACTTTCTCTCTTTTTGATGATCTTCTTCACCGATTCAAATCCGATCTAGAAATGGTGTCAGAAGGATCCACAGCAAGCGCTTCAGAATCGAAACCACTTGGAATTGCAAATGACGCGGACAGTTTTCTTAGCCCTAGATTCAAATCGGCGGCCGCCATGGCCGGCTGGGATGAAGAGGCTCTTCTATTCGCGAGCCTCGTGGTTGACGACACGCCGGAAAGAGAGTTTCAGCAGAAGAAACGATCTGTTCTCCAGCGCAAGAGTCCTGCATCTGGTTCAAGAAGGTATATATATATATATTGATTGTGTTTCTTCTCTTGTTTTTTATGTGAATCGTGGAGATATATGAGCGGATCCGAGAGTTTCTTGTTCCAATTGGGATCGATTTGTTGGAAAGTGGTGTTGATTTCTTGGTTTTTTGTTTTTAGGAAACGGAGGACTTTGACGAGCATAATTTCGATTCCGGTGGCTGTTCTTGACCTCGATGAGACAGAACCCACTGTGAAAGGTGTGAATTCTTCTCTCCAGTGCTCTGAGCATTTGGATTTCCTTTTAGCCCTAATTAATTCCTTTCCTTACCCGACAAATGTTTACAAATTTTGTTATGGATGGTTTCCTTTCTTGTCATTTCATTAAAGGTTCATGCATAGAAACATTTGAATTCACAATCAGACTCTAATAACAAAACGAGTATTTTAGGTCCTATTTGGTATTGATTTAGTCTATTTTGTTTTTTAGAAATTATACATGTTTTTTTAAGACTTCAGTGTAAGGATTTTCACCTGTTATTAACCACATATGTGAATTCTTAATCAAATTCTAGGTAACCATTTGATTTTTAATTTTTGAAACATTGACCTACAGTAATTCTCATAAAAAATCAAATTGTTACTACATAGAGTCCTAGCTTTCAAATTGCTCTTAAAAGTAGGTAACAAGAAAAGCAAGGGTTAAACAGTATTTATAAACTTAGTTTTCTTTTGATGAATGATGGATGGCTGGCTAGAGTTTCAGAATTGTGCCCATTTTCAAAATTTATGGAGTAGATATGAACAGAGTTGTTTCAAATGACATGAACAGATGATGGTCCAAAACAAGAGCCAAAATCTGCAGAAGCTGAAGCAAAGAAGAGTGATTCAATGGTTGAACAGAAAGCTGACGCTTCTTCTTTAACATCTTCAACTCTCCCATTGGATAAGCTCAGAGAAGAGCTTTCTTGTGCTGTAAGGATATTCTCTCCACTTACAAGCTTGAGACATCTTTTTGTACACTTCTCTCTCATTCTTAACTGTCTCTTTTTTCCCCCTAATTCTTTTCACAGATTTGTTTGGAAATTTGCTTCGAACCTAGTACCACACCTTGTGGACACAGGTAAGCCCAAAACTGACTTCTTGTTCTTGCACGTTTTGGAATTTTGAGTTTGTTTTAATTCCTAAATTATGCAGCAAAATTATTTTAGTTGATTTTTCATTAATTATTACATAATTTCCATTTCTTGACCAGTCAATAGAAATTTAAAATGTCAATACACATAAAATTGATATTTTTGTGACATATTCAATATTTTGATAAAATTCACACACATACTAAACTACTAGATACAAAATTAAAAGTTTACCAGTTTATGGCTGATATTAACAAACATGTTAGTTTTCAACAATAGCGAAAATGTCAATAACCCAAAATGGAAACTTCAAGGACTTATTGACATTTTTAAAAGTTCATTGATCCATCCTGCAAACTTACACCAGTATGAAAATTTGGAGACTAAAGTTCTGAAGCTGAACTTTTGTTTTTCACTCTTTTTGTAGTTTCTGCAAGAAATGTCTAAGATCTGCAGCTGACAAATGTGGAAAAAGGTGCCCTAAATGCAGACAACTAATAAGGTTGAATTTGCAACTCCAAAAGTTCCATGAACCAAATCAGTTGGGATCATTTCATTTTCAAACATTTAGTGCTTATATCTCTCTTGTTGATCTTAAATGTGCAGCAATGGGAGATCTTGCACTGTCAATACAGTTCTTTGGAACACAATACAGCTTCTCTTTCCCAAAGAGGTTGAAGCAAGGAAGGAAGCAAGAGAGTGTAATAGCCGTGAAAAGAAGATTCAAGACCCAGAAAAGGCATTCTATAGTAGTCTGCAGAACTATGATACAAGACCAATTGGCACGTCGAGTAGGCATGCTAGTACAAGAAGAAGAGGGGAAATAACAGTTCAGGAGGAGAATGGTGAATGGGACAGCAGGGTGACACAACGAGCTGTGCCTTCAAATGCTGAAAGCAGAGTCCAGACCAGAATGCACCGTCGAAGTATTCGACCAATGAGGATGGCGACTCGAGGTGTAGATGTAAGAAGTAGTAGGAGAGGTACGCCAGACCAAGATCAGGATGCTGCTTTAGCGCTGAGGCTACAAAGGGAAGAGTTTTTGGAGGCTTTTAGAGACACCACTCAAGTTGATACCAGAAGCTCGTTGTCCTTGACTAGAGCTAATATAAGAGCAATTGCTTCTAGGGCAGCCATTAACCTTCGCATTAGTGGCCACCAGAATTTGTAATCTTGTACTTTTTCTTCGACTAACTTTCGAATGTCTTGAACTTCTAATAATCTAATGCTAATCTAATGCCGACTGTTCTTGAATCTTGGACAAACAATTAAGCTTTGAAGCATAAAAATAGAACTTTTGCTATTACAAACTTGAACCGGAAGTGAGAGAAAGAGAGAACTCATAACTGGGAAAAAATGTACACAAATCGTGATAAAAAATTGGAAAGAAAAGGTTCAGTCTCGTTGTTGGCTTTCGATAGAGAATTCGAAGCATTTTTACAAGGCCAATGATATTTGTAGCCTCCTAATCTCAGGCAAGTTCCCTATCTTACAAAAGATCAAAATGGAAGGAGGAAAAACTTTGATTTAACGCCTACGAAAAAATGTTACACTCCCTCATTCTACATACATGGCATGATCTCCAACCGTGACACTACCTCAACTCGGTTATGTCTTGGCTACTTCAGAATATACCATCAATAGGAGAACTCGTGGCCTCGTAGTGAAATATATTTTTTGACCCAGATGGCAATGTCCTCTGCACAAGCTTGGGCTTGAGGTGTCTTGAGAAGAATATCGAGGGTTGCAAATTCGTGCACTGCATCCTTGTAGTCGAGAACAGGTGCATCGACATTTACCTTTCGAAGTTCTTCAGAATAAGCTATGGCTCGGTCTCTCATCCAATCAAGTTCCGCCACAACTGTCAGTGTTGGTGGCATGAGCTTTAGAGGTGGGCCTTCTCTACCGGAAACAAGTGGATTTGCAGCTGGATGATCAAGACTAAAGTTTTCCTCGGGTAGGAAAAGTTTCCAAGCAAGAAGGCACATAGCTTTGTCGTAAAAATACGAATTTGCCAGCTTCAACTCTGAATGAGTGGGGACACTACCAACAAAAAACGGATATAGGAGAACCTGGGCAACTACCTTGACAGGATCCAAGAGCTTACCAGCCTCCACAGCCTTTCGAGCCACATAATCCGCTACATTTGCTCCACAGCTAACCCCAAGAAGAACACATCT

Coding sequence (CDS)

ATGGTGTCAGAAGGATCCACAGCAAGCGCTTCAGAATCGAAACCACTTGGAATTGCAAATGACGCGGACAGTTTTCTTAGCCCTAGATTCAAATCGGCGGCCGCCATGGCCGGCTGGGATGAAGAGGCTCTTCTATTCGCGAGCCTCGTGGTTGACGACACGCCGGAAAGAGAGTTTCAGCAGAAGAAACGATCTGTTCTCCAGCGCAAGAGTCCTGCATCTGGTTCAAGAAGGAAACGGAGGACTTTGACGAGCATAATTTCGATTCCGGTGGCTGTTCTTGACCTCGATGAGACAGAACCCACTGTGAAAGATGATGGTCCAAAACAAGAGCCAAAATCTGCAGAAGCTGAAGCAAAGAAGAGTGATTCAATGGTTGAACAGAAAGCTGACGCTTCTTCTTTAACATCTTCAACTCTCCCATTGGATAAGCTCAGAGAAGAGCTTTCTTGTGCTGTAAGGATATTCTCTCCACTTACAAGCTTGAGACATCTTTTTGTACACTTCTCTCTCATTCTTAACTGTCTCTTTTTTCCCCCTAATTCTTTTCACAGATTTGTTTGGAAATTTGCTTCGAACCTAGTACCACACCTTGTGGACACAGTTTCTGCAAGAAATGTCTAA

Protein sequence

MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQQKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAKKSDSMVEQKADASSLTSSTLPLDKLREELSCAVRIFSPLTSLRHLFVHFSLILNCLFFPPNSFHRFVWKFASNLVPHLVDTVSARNV
Homology
BLAST of Cucsat.G15466 vs. NCBI nr
Match: XP_004145719.1 (uncharacterized protein LOC101209296 [Cucumis sativus] >KGN58207.1 hypothetical protein Csa_017490 [Cucumis sativus])

HSP 1 Score: 266 bits (681), Expect = 4.37e-85
Identity = 153/165 (92.73%), Postives = 157/165 (95.15%), Query Frame = 0

Query: 1   MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQ 60
           MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALL ASLVVDDTPEREFQ
Sbjct: 1   MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQ 60

Query: 61  QKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAK 120
           QKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAK
Sbjct: 61  QKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAK 120

Query: 121 KSDSMVEQKADASSLTSSTLP-LDKLREELSCAVRI---FSPLTS 161
           KSDSMVEQKADASSLTSSTLP +DKLREELSCA+ +   F P T+
Sbjct: 121 KSDSMVEQKADASSLTSSTLPCMDKLREELSCAICLEICFEPSTT 165

BLAST of Cucsat.G15466 vs. NCBI nr
Match: XP_008450054.1 (PREDICTED: LON peptidase N-terminal domain and RING finger protein 3-like [Cucumis melo])

HSP 1 Score: 233 bits (595), Expect = 4.86e-72
Identity = 138/164 (84.15%), Postives = 144/164 (87.80%), Query Frame = 0

Query: 4   EGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQQKK 63
           EGSTA  SE KPLGIANDADSFLSPRFKSAAAMAGWDEEALL ASLVVDDTPEREFQQKK
Sbjct: 6   EGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKK 65

Query: 64  RSVLQRKSPASGS--RRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAKK 123
           RS LQRKSPAS S  RRKRRTLTSIISIPV VLDL+E EP VKDDGPKQEPK AEAEAKK
Sbjct: 66  RSDLQRKSPASASASRRKRRTLTSIISIPVTVLDLEEEEPAVKDDGPKQEPKYAEAEAKK 125

Query: 124 SDSMVEQKADASSLTSSTLP-LDKLREELSCAVRI---FSPLTS 161
            DSMVEQKADASSL+SSTLP +DKLREELSCA+ +   F P T+
Sbjct: 126 CDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTT 169

BLAST of Cucsat.G15466 vs. NCBI nr
Match: KAA0056261.1 (LON peptidase N-terminal domain and RING finger protein 3-like [Cucumis melo var. makuwa] >TYK05240.1 LON peptidase N-terminal domain and RING finger protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 233 bits (595), Expect = 4.86e-72
Identity = 138/164 (84.15%), Postives = 144/164 (87.80%), Query Frame = 0

Query: 4   EGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQQKK 63
           EGSTA  SE KPLGIANDADSFLSPRFKSAAAMAGWDEEALL ASLVVDDTPEREFQQKK
Sbjct: 6   EGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKK 65

Query: 64  RSVLQRKSPASGS--RRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAKK 123
           RS LQRKSPAS S  RRKRRTLTSIISIPV VLDL+E EP VKDDGPKQEPK AEAEAKK
Sbjct: 66  RSDLQRKSPASASASRRKRRTLTSIISIPVTVLDLEEEEPAVKDDGPKQEPKYAEAEAKK 125

Query: 124 SDSMVEQKADASSLTSSTLP-LDKLREELSCAVRI---FSPLTS 161
            DSMVEQKADASSL+SSTLP +DKLREELSCA+ +   F P T+
Sbjct: 126 CDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTT 169

BLAST of Cucsat.G15466 vs. NCBI nr
Match: XP_038895790.1 (putative E3 ubiquitin-protein ligase RING1a [Benincasa hispida])

HSP 1 Score: 227 bits (578), Expect = 2.02e-69
Identity = 134/172 (77.91%), Postives = 144/172 (83.72%), Query Frame = 0

Query: 1   MVSEGSTASASE-------SKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDD 60
           MV EGSTASASE       SKP GI ND +SFLSPRFKSAAAMAGWDEE LL ASLVVDD
Sbjct: 1   MVPEGSTASASEPERRTIESKPPGIGNDVESFLSPRFKSAAAMAGWDEETLLIASLVVDD 60

Query: 61  TPEREFQQKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPK 120
           TPERE QQKKRSVLQRKSPASG RRKRRTLTSIIS+PV VLDLDE EPTVKDD PKQ+P+
Sbjct: 61  TPERELQQKKRSVLQRKSPASGLRRKRRTLTSIISVPVTVLDLDEEEPTVKDDAPKQDPE 120

Query: 121 SAEAEAKKSDSMVEQKADASSLTSSTLP-LDKLREELSCAVRI---FSPLTS 161
           +AEAE KKSDSMVEQK DASSL+ STLP +DKLREELSCA+ +   F P T+
Sbjct: 121 TAEAEPKKSDSMVEQKVDASSLSCSTLPCMDKLREELSCAICLEICFEPSTT 172

BLAST of Cucsat.G15466 vs. NCBI nr
Match: XP_022984007.1 (E3 ubiquitin-protein ligase TRIM39-like [Cucurbita maxima])

HSP 1 Score: 211 bits (538), Expect = 1.89e-63
Identity = 128/172 (74.42%), Postives = 139/172 (80.81%), Query Frame = 0

Query: 1   MVSEGSTASASE-------SKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDD 60
           MV EGSTASASE       S+PL   NDADSF SPRFKSAAAMAGWDEEALL ASLVVDD
Sbjct: 1   MVQEGSTASASEPEQRVIESRPLECGNDADSFFSPRFKSAAAMAGWDEEALLIASLVVDD 60

Query: 61  TPEREFQQKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPK 120
           TPEREFQQKKRSVL  KSP SGSRRKRR  TS ISIPVAVLDLD  EPTVKDD  KQ+P+
Sbjct: 61  TPEREFQQKKRSVLHCKSPTSGSRRKRRISTSKISIPVAVLDLDAEEPTVKDDATKQDPE 120

Query: 121 SAEAEAKKSDSMVEQKADASSLTSSTLP-LDKLREELSCAVRI---FSPLTS 161
           +AEAE KKSDS++EQKA ASSL+ STLP +DKLREELSCA+ +   F P T+
Sbjct: 121 TAEAEPKKSDSLIEQKAGASSLSCSTLPFIDKLREELSCAICLEICFEPSTT 172

BLAST of Cucsat.G15466 vs. ExPASy TrEMBL
Match: A0A0A0LBY2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G592120 PE=4 SV=1)

HSP 1 Score: 266 bits (681), Expect = 2.12e-85
Identity = 153/165 (92.73%), Postives = 157/165 (95.15%), Query Frame = 0

Query: 1   MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQ 60
           MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALL ASLVVDDTPEREFQ
Sbjct: 1   MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQ 60

Query: 61  QKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAK 120
           QKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAK
Sbjct: 61  QKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAK 120

Query: 121 KSDSMVEQKADASSLTSSTLP-LDKLREELSCAVRI---FSPLTS 161
           KSDSMVEQKADASSLTSSTLP +DKLREELSCA+ +   F P T+
Sbjct: 121 KSDSMVEQKADASSLTSSTLPCMDKLREELSCAICLEICFEPSTT 165

BLAST of Cucsat.G15466 vs. ExPASy TrEMBL
Match: A0A5A7URU5 (LON peptidase N-terminal domain and RING finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00490 PE=4 SV=1)

HSP 1 Score: 233 bits (595), Expect = 2.35e-72
Identity = 138/164 (84.15%), Postives = 144/164 (87.80%), Query Frame = 0

Query: 4   EGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQQKK 63
           EGSTA  SE KPLGIANDADSFLSPRFKSAAAMAGWDEEALL ASLVVDDTPEREFQQKK
Sbjct: 6   EGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKK 65

Query: 64  RSVLQRKSPASGS--RRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAKK 123
           RS LQRKSPAS S  RRKRRTLTSIISIPV VLDL+E EP VKDDGPKQEPK AEAEAKK
Sbjct: 66  RSDLQRKSPASASASRRKRRTLTSIISIPVTVLDLEEEEPAVKDDGPKQEPKYAEAEAKK 125

Query: 124 SDSMVEQKADASSLTSSTLP-LDKLREELSCAVRI---FSPLTS 161
            DSMVEQKADASSL+SSTLP +DKLREELSCA+ +   F P T+
Sbjct: 126 CDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTT 169

BLAST of Cucsat.G15466 vs. ExPASy TrEMBL
Match: A0A1S3BPD3 (LON peptidase N-terminal domain and RING finger protein 3-like OS=Cucumis melo OX=3656 GN=LOC103491762 PE=4 SV=1)

HSP 1 Score: 233 bits (595), Expect = 2.35e-72
Identity = 138/164 (84.15%), Postives = 144/164 (87.80%), Query Frame = 0

Query: 4   EGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQQKK 63
           EGSTA  SE KPLGIANDADSFLSPRFKSAAAMAGWDEEALL ASLVVDDTPEREFQQKK
Sbjct: 6   EGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKK 65

Query: 64  RSVLQRKSPASGS--RRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAKK 123
           RS LQRKSPAS S  RRKRRTLTSIISIPV VLDL+E EP VKDDGPKQEPK AEAEAKK
Sbjct: 66  RSDLQRKSPASASASRRKRRTLTSIISIPVTVLDLEEEEPAVKDDGPKQEPKYAEAEAKK 125

Query: 124 SDSMVEQKADASSLTSSTLP-LDKLREELSCAVRI---FSPLTS 161
            DSMVEQKADASSL+SSTLP +DKLREELSCA+ +   F P T+
Sbjct: 126 CDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTT 169

BLAST of Cucsat.G15466 vs. ExPASy TrEMBL
Match: A0A6J1J0X7 (E3 ubiquitin-protein ligase TRIM39-like OS=Cucurbita maxima OX=3661 GN=LOC111482456 PE=4 SV=1)

HSP 1 Score: 211 bits (538), Expect = 9.14e-64
Identity = 128/172 (74.42%), Postives = 139/172 (80.81%), Query Frame = 0

Query: 1   MVSEGSTASASE-------SKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDD 60
           MV EGSTASASE       S+PL   NDADSF SPRFKSAAAMAGWDEEALL ASLVVDD
Sbjct: 1   MVQEGSTASASEPEQRVIESRPLECGNDADSFFSPRFKSAAAMAGWDEEALLIASLVVDD 60

Query: 61  TPEREFQQKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPK 120
           TPEREFQQKKRSVL  KSP SGSRRKRR  TS ISIPVAVLDLD  EPTVKDD  KQ+P+
Sbjct: 61  TPEREFQQKKRSVLHCKSPTSGSRRKRRISTSKISIPVAVLDLDAEEPTVKDDATKQDPE 120

Query: 121 SAEAEAKKSDSMVEQKADASSLTSSTLP-LDKLREELSCAVRI---FSPLTS 161
           +AEAE KKSDS++EQKA ASSL+ STLP +DKLREELSCA+ +   F P T+
Sbjct: 121 TAEAEPKKSDSLIEQKAGASSLSCSTLPFIDKLREELSCAICLEICFEPSTT 172

BLAST of Cucsat.G15466 vs. ExPASy TrEMBL
Match: A0A6J1F9B4 (E3 ubiquitin-protein ligase ORTHRUS 1-like OS=Cucurbita moschata OX=3662 GN=LOC111441989 PE=4 SV=1)

HSP 1 Score: 208 bits (530), Expect = 1.34e-62
Identity = 126/172 (73.26%), Postives = 139/172 (80.81%), Query Frame = 0

Query: 1   MVSEGSTASASE-------SKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDD 60
           MV EGS ASASE       S+PL   NDADSF SPRFKSAAAMAGWDEEALL ASLVVDD
Sbjct: 1   MVQEGSRASASEPERRAIESRPLESGNDADSFFSPRFKSAAAMAGWDEEALLIASLVVDD 60

Query: 61  TPEREFQQKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPK 120
           TPEREFQQKKRSVL  KSP SGSRRKRRT TSIISIPVAVLDLD  EPTV+DD  KQ+P+
Sbjct: 61  TPEREFQQKKRSVLHCKSPTSGSRRKRRTSTSIISIPVAVLDLDAEEPTVRDDATKQDPE 120

Query: 121 SAEAEAKKSDSMVEQKADASSLTSSTLP-LDKLREELSCAVRI---FSPLTS 161
           +AEAE KKS+S++EQKA  SSL+ STLP +DKLREELSCA+ +   F P T+
Sbjct: 121 TAEAEPKKSNSLIEQKAGDSSLSCSTLPCIDKLREELSCAICLEICFEPSTT 172

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_004145719.14.37e-8592.73uncharacterized protein LOC101209296 [Cucumis sativus] >KGN58207.1 hypothetical ... [more]
XP_008450054.14.86e-7284.15PREDICTED: LON peptidase N-terminal domain and RING finger protein 3-like [Cucum... [more]
KAA0056261.14.86e-7284.15LON peptidase N-terminal domain and RING finger protein 3-like [Cucumis melo var... [more]
XP_038895790.12.02e-6977.91putative E3 ubiquitin-protein ligase RING1a [Benincasa hispida][more]
XP_022984007.11.89e-6374.42E3 ubiquitin-protein ligase TRIM39-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A0A0LBY22.12e-8592.73RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G592120 P... [more]
A0A5A7URU52.35e-7284.15LON peptidase N-terminal domain and RING finger protein 3-like OS=Cucumis melo v... [more]
A0A1S3BPD32.35e-7284.15LON peptidase N-terminal domain and RING finger protein 3-like OS=Cucumis melo O... [more]
A0A6J1J0X79.14e-6474.42E3 ubiquitin-protein ligase TRIM39-like OS=Cucurbita maxima OX=3661 GN=LOC111482... [more]
A0A6J1F9B41.34e-6273.26E3 ubiquitin-protein ligase ORTHRUS 1-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 151..189
e-value: 1.1E-6
score: 38.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 151..190
score: 12.474524
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 151..189
e-value: 5.3E-7
score: 29.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 102..213
e-value: 3.7E-20
score: 73.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..80
NoneNo IPR availablePANTHERPTHR23328UNCHARACTERIZEDcoord: 22..193
NoneNo IPR availablePANTHERPTHR23328:SF6SUBFAMILY NOT NAMEDcoord: 22..193
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 143..195
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 166..175

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G15466.T4Cucsat.G15466.T4mRNA
Cucsat.G15466.T5Cucsat.G15466.T5mRNA
Cucsat.G15466.T6Cucsat.G15466.T6mRNA
Cucsat.G15466.T7Cucsat.G15466.T7mRNA
Cucsat.G15466.T1Cucsat.G15466.T1mRNA
Cucsat.G15466.T2Cucsat.G15466.T2mRNA
Cucsat.G15466.T3Cucsat.G15466.T3mRNA
Cucsat.G15466.T8Cucsat.G15466.T8mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding