Cucsat.G15451 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G15451
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	TCP transcription factor
Location	ctg2009: 5568851 .. 5570667 (-)
RNA-Seq Expression	Cucsat.G15451
Synteny	Cucsat.G15451

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTCCTCCTCCTTCTTCTTCTTCTTCTATGGATCCTAAAACCTCATCAACAACAAAGCAGCCCCAAGAAGAAGTGGTACCCAACTTTTTTAAGCTCTCACAAGAAGAAGCAGCAGAAGAAGTTGCAATCATGGGTGAAAATAAACCTGCTGAAATCAAAGATTTTCAAATAGCAATTGCAGAGAAAGAAGAAGGAAAAAAACAGTTAGCCCCCAAAAGAAGCTCCAACAAAGACCGTCACACCAAAGTTGAAGGCAGAGGCCGAAGAATCCGTATGCCAGCTCTATGTGCTGCTAGGATTTTTCAATTGACTAGAGAATTGGATCATAAATCCGACGGCGAAACCATCCAGTGGTTGCTACAGCAGGCGGAGCCGTCTATAATCGCCGCCACAGGCACCGGAACCATTCCTGCTTCTGCTCTAGCCGCGGCAGCTGGTTCTGTTTCACAACAGGGTGCTTCTTTGTCGGCCGGATTGCATCAAAAGTTGGAGGAATTAGGAGGTGGGGGGTCCAGTAGGGCCAATTGGGGGCGACCCCATTTGGCCGCCACTCCCACTGCCCTTTGGCCCTCATCCGTCACTGGCTTTGGTTTTCAGTCTTCGACTGCCGCTGCTGCTGTTGCTGCTCAATCAGCTACTAATTTACCTAATGAAACTTCAAATTACTTTCACAAACTTGGTTTCCCACCTTTTGATTTAACCCCCACCAACATGGGTCCTATGAGTTTCACCTCCATTTTAGGTGCCAACACTCAACAATTGCCTGGTTTGGAGCTTGGATTGTCCCAAGATGGTCATATCGGGGTCCTAAATCCTCAAGCTCTTAACCAAATTTACCAACAGATGGGACAACCTAGAGTTCATCAACATCACCACCAGCAACCTCCTGCTAAGGATGATTCTCAAGATTCAGCCTAGAAAATGGAAGAATAAGGATTTTTCTTTTCTTTTCGTTTCTTTCTTTTCTTTTCTTTTCTTTTTTTTCTTTTTTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTGTTTGTTTTTTTTTTTTTTTTTTGAGGGAGGATGGCAAATGGCTATAAGGTTTTTTTTTTTTTTTTTTTCTTTTTTTACTTTTGGTTTTCCATTTCCTTTATGGGTTTTTGTATTGTATTGTATAATTTTAAAGTGAGAACAAAAAGAAAAGAAAAAAAAAAGAGAGAGAGATACCTACCTGAGAGGAAATTCTATATTTGGTTTGCACCCTCCTTGTGAATTGCAATCTTTCAAACTCTTCTTCACATCCCAGGTTATTTCTTGATTCTTTGAAAGCTTTTCAAACGTTTGGATGTATAGAAAATGGAGGTTCTTTCTTTTTCTTCATGTTATCTTATTGATTGTTGTTTCTTTTTGGCTTTTGCAGGTGTGATTTTATACAACTGAAAGCAGCTTGGCTTGAGCTTAACTACATTTTTTGTTTGTTTCTCTATTAAAAAAGGTGTGTTGATCATATTGTAAGGCAACTTTACTTGTTCAGTTCTCTAGTTCTTGCTATAATATTGAACAATTGGTTTGTGAAATTTGAGATAGAATTTTTTTATTCCCAGTTCCTAAGCTTTCAGTCTTCTGCATAATCAAAGGAGCTATTAGTTTGTTCTTATTTCACCTCTTATGAACAATATTGAGTTCTGAATCTTAAACTGCTTATTCTGGTTTACAATCTTTGAAAATTTTCCATTCCTAGCCGAGTGCATTTAATGTCGGAGGAACGATTAAGGATGTTTGATAACTGGGGGTTATCGGGCTAGGCAAGCCATCTAATTTACTCCTTCATCTTTTAATTCAAAC

Coding sequence (CDS)

TCTCCTCCTCCTTCTTCTTCTTCTTCTATGGATCCTAAAACCTCATCAACAACAAAGCAGCCCCAAGAAGAAGTGGTACCCAACTTTTTTAAGCTCTCACAAGAAGAAGCAGCAGAAGAAGTTGCAATCATGGGTGAAAATAAACCTGCTGAAATCAAAGATTTTCAAATAGCAATTGCAGAGAAAGAAGAAGGAAAAAAACAGTTAGCCCCCAAAAGAAGCTCCAACAAAGACCGTCACACCAAAGTTGAAGGCAGAGGCCGAAGAATCCGTATGCCAGCTCTATGTGCTGCTAGGATTTTTCAATTGACTAGAGAATTGGATCATAAATCCGACGGCGAAACCATCCAGTGGTTGCTACAGCAGGCGGAGCCGTCTATAATCGCCGCCACAGGCACCGGAACCATTCCTGCTTCTGCTCTAGCCGCGGCAGCTGGTTCTGTTTCACAACAGGGTGCTTCTTTGTCGGCCGGATTGCATCAAAAGTTGGAGGAATTAGGAGGTGGGGGGTCCAGTAGGGCCAATTGGGGGCGACCCCATTTGGCCGCCACTCCCACTGCCCTTTGGCCCTCATCCGTCACTGGCTTTGGTTTTCAGTCTTCGACTGCCGCTGCTGCTGTTGCTGCTCAATCAGCTACTAATTTACCTAATGAAACTTCAAATTACTTTCACAAACTTGGTTTCCCACCTTTTGATTTAACCCCCACCAACATGGGTCCTATGAGTTTCACCTCCATTTTAGGTGCCAACACTCAACAATTGCCTGGTTTGGAGCTTGGATTGTCCCAAGATGGTCATATCGGGGTCCTAAATCCTCAAGCTCTTAACCAAATTTACCAACAGATGGGACAACCTAGAGTTCATCAACATCACCACCAGCAACCTCCTGCTAAGGATGATTCTCAAGATTCAGCCTAG

Protein sequence

SPPPSSSSSMDPKTSSTTKQPQEEVVPNFFKLSQEEAAEEVAIMGENKPAEIKDFQIAIAEKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEELGGGGSSRANWGRPHLAATPTALWPSSVTGFGFQSSTAAAAVAAQSATNLPNETSNYFHKLGFPPFDLTPTNMGPMSFTSILGANTQQLPGLELGLSQDGHIGVLNPQALNQIYQQMGQPRVHQHHHQQPPAKDDSQDSA

Homology

[Close]

BLAST of Cucsat.G15451 vs. ExPASy Swiss-Prot
Match: Q9LSD5 (Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.3e-64
Identity = 176/334 (52.69%), Postives = 203/334 (60.78%), Query Frame = 0


Query: 10  MDPKTSSTTKQPQEEVVPNFFK---------LSQEEAAEEVAIMGENKP-AEIKDFQIAI 69
           MDPK  +         VPNF           L  ++AA  V      KP  EIKDFQI +
Sbjct: 1   MDPKNLN------RHQVPNFLNPPPPPRNQGLVDDDAASAVVSDENRKPTTEIKDFQIVV 60

Query: 70  --AEKEEGKK-----QLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSD 129
             ++KE  KK     QL PKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTREL HKSD
Sbjct: 61  SASDKEPNKKSQNQNQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSD 120

Query: 130 GETIQWLLQQAEPSIIAATGTGTIPASALA-AAAGSVSQQGASLSAGLHQKLEELGGGGS 189
           GETIQWLLQQAEPSIIAATG+GTIPASALA +AA S   QG SL+AGL     +L GG S
Sbjct: 121 GETIQWLLQQAEPSIIAATGSGTIPASALASSAATSNHHQGGSLTAGL-MISHDLDGGSS 180

Query: 190 SRA---NWG-----RPHLAATPTALWPSSVTGFGFQSSTAAAAVAAQSATNLPNETSNYF 249
           S     NWG         ++ PT LWP +V GFG          +    T L +E + Y 
Sbjct: 181 SSGRPLNWGIGGGEGVSRSSLPTGLWP-NVAGFG----------SGVPTTGLMSEGAGY- 240

Query: 250 HKLGFPPFDLTPTNMGPMSFTSILGANTQQLPGLELGLSQDGHIGVLNPQALNQIYQQMG 305
            ++GFP FD     +G MSF SILG N  Q+PGLELGLSQ+G++GVLNPQ+  QIYQQMG
Sbjct: 241 -RIGFPGFDF--PGVGHMSFASILGGNHNQMPGLELGLSQEGNVGVLNPQSFTQIYQQMG 300

[Close]

BLAST of Cucsat.G15451 vs. ExPASy Swiss-Prot
Match: Q9C518 (Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.9e-27
Identity = 70/111 (63.06%), Postives = 84/111 (75.68%), Query Frame = 0


Query: 73  RSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAEPSIIAATG 132
           + S KDRHTKV+GRGRRIRMPALCAAR+FQLTREL HKSDGETI+WLLQQAEP+I+AATG
Sbjct: 57  KRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATG 116

Query: 133 TGTIPASALAAAAGSVSQQGASLSA------------GL-HQKLEELGGGG 171
           TGTIPA+  +  + S+   G++LSA            GL H + +E GGGG
Sbjct: 117 TGTIPAN-FSTLSVSLRSSGSTLSAPPSKSVPLYGALGLTHHQYDEQGGGG 166

[Close]

BLAST of Cucsat.G15451 vs. ExPASy Swiss-Prot
Match: Q9C9L2 (Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.9e-27
Identity = 67/98 (68.37%), Postives = 79/98 (80.61%), Query Frame = 0


Query: 60  AEKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWL 119
           +E     K+  PKR+S KDRHTKVEGRGRRIRMPA+CAAR+FQLTREL HKSDGETI+WL
Sbjct: 36  SEPNSEPKKPPPKRTSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWL 95

Query: 120 LQQAEPSIIAATGTGTIPASALAAAAGSVSQQGASLSA 158
           LQQAEP++IAATGTGTIPA+   +   S+    +SLSA
Sbjct: 96  LQQAEPAVIAATGTGTIPAN-FTSLNISLRSSRSSLSA 132

[Close]

BLAST of Cucsat.G15451 vs. ExPASy Swiss-Prot
Match: O64647 (Transcription factor TCP9 OS=Arabidopsis thaliana OX=3702 GN=TCP9 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.2e-26
Identity = 59/71 (83.10%), Postives = 66/71 (92.96%), Query Frame = 0


Query: 72  KRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAEPSIIAAT 131
           KR+S KDRHTKVEGRGRRIRMPA CAARIFQLTREL HKSDGETI+WLL+ AEP+IIAAT
Sbjct: 71  KRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLENAEPAIIAAT 130

Query: 132 GTGTIPASALA 143
           GTGT+PA A++
Sbjct: 131 GTGTVPAIAMS 141

[Close]

BLAST of Cucsat.G15451 vs. ExPASy Swiss-Prot
Match: Q9LT89 (Transcription factor TCP19 OS=Arabidopsis thaliana OX=3702 GN=TCP19 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.2e-26
Identity = 59/77 (76.62%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 66  KKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAEP 125
           K + APKR ++KDRHTKVEGRGRRIRMPA CAAR+FQLTREL HKSDGETI+WLL++AEP
Sbjct: 47  KTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEP 106

Query: 126 SIIAATGTGTIPASALA 143
           +II ATGTGT+PA A++
Sbjct: 107 AIIEATGTGTVPAIAVS 123

[Close]

BLAST of Cucsat.G15451 vs. NCBI nr
Match: XP_004148022.1 (transcription factor TCP20 [Cucumis sativus] >KGN58160.1 hypothetical protein Csa_017424 [Cucumis sativus])

HSP 1 Score: 564 bits (1454), Expect = 3.43e-202
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 10  MDPKTSSTTKQPQEEVVPNFFKLSQEEAAEEVAIMGENKPAEIKDFQIAIAEKEEGKKQL 69
           MDPKTSSTTKQPQEEVVPNFFKLSQEEAAEEVAIMGENKPAEIKDFQIAIAEKEEGKKQL
Sbjct: 1   MDPKTSSTTKQPQEEVVPNFFKLSQEEAAEEVAIMGENKPAEIKDFQIAIAEKEEGKKQL 60

Query: 70  APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAEPSIIA 129
           APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAEPSIIA
Sbjct: 61  APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAEPSIIA 120

Query: 130 ATGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEELGGGGSSRANWGRPHLAATPTALW 189
           ATGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEELGGGGSSRANWGRPHLAATPTALW
Sbjct: 121 ATGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEELGGGGSSRANWGRPHLAATPTALW 180

Query: 190 PSSVTGFGFQSSTAAAAVAAQSATNLPNETSNYFHKLGFPPFDLTPTNMGPMSFTSILGA 249
           PSSVTGFGFQSSTAAAAVAAQSATNLPNETSNYFHKLGFPPFDLTPTNMGPMSFTSILGA
Sbjct: 181 PSSVTGFGFQSSTAAAAVAAQSATNLPNETSNYFHKLGFPPFDLTPTNMGPMSFTSILGA 240

Query: 250 NTQQLPGLELGLSQDGHIGVLNPQALNQIYQQMGQPRVHQHHHQQPPAKDDSQDSA 305
           NTQQLPGLELGLSQDGHIGVLNPQALNQIYQQMGQPRVHQHHHQQPPAKDDSQDSA
Sbjct: 241 NTQQLPGLELGLSQDGHIGVLNPQALNQIYQQMGQPRVHQHHHQQPPAKDDSQDSA 296

[Close]

BLAST of Cucsat.G15451 vs. NCBI nr
Match: XP_008450133.1 (PREDICTED: transcription factor TCP20 [Cucumis melo])

HSP 1 Score: 542 bits (1397), Expect = 1.61e-193
Identity = 289/297 (97.31%), Postives = 291/297 (97.98%), Query Frame = 0


Query: 10  MDPKTSSTTKQPQEEVVPNFFKLSQE-EAAEEVAIMGENKPAEIKDFQIAIAEKEEGKKQ 69
           MDPKTSSTTKQPQEEVVPNFFKLS+E E AEE  IMGENKPAEIKDFQIAIAEKEEGKKQ
Sbjct: 1   MDPKTSSTTKQPQEEVVPNFFKLSEEVEEAEE--IMGENKPAEIKDFQIAIAEKEEGKKQ 60

Query: 70  LAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAEPSII 129
           LAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAEPSII
Sbjct: 61  LAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAEPSII 120

Query: 130 AATGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEELGGGGSSRANWGRPHLAATPTAL 189
           AATGTGTIPASALA AAGSVSQQGASLSAGLHQKLEELGGGGSSRANWGRPHLAATPTAL
Sbjct: 121 AATGTGTIPASALATAAGSVSQQGASLSAGLHQKLEELGGGGSSRANWGRPHLAATPTAL 180

Query: 190 WPSSVTGFGFQSSTAAAAVAAQSATNLPNETSNYFHKLGFPPFDLTPTNMGPMSFTSILG 249
           WPSSVTGFGFQSSTAAAAVAAQSATNLPNETSNYFHKLGFPPFDLTPTNMGPMSFTSILG
Sbjct: 181 WPSSVTGFGFQSSTAAAAVAAQSATNLPNETSNYFHKLGFPPFDLTPTNMGPMSFTSILG 240

Query: 250 ANTQQLPGLELGLSQDGHIGVLNPQALNQIYQQMGQPRVHQHHHQQPPAKDDSQDSA 305
           ANTQQLPGLELGLSQDGHIGV+NPQALNQIYQQMGQPRVHQHH QQPPAKDDSQDSA
Sbjct: 241 ANTQQLPGLELGLSQDGHIGVINPQALNQIYQQMGQPRVHQHHPQQPPAKDDSQDSA 295

[Close]

BLAST of Cucsat.G15451 vs. NCBI nr
Match: KAA0060260.1 (transcription factor TCP20 [Cucumis melo var. makuwa] >TYJ95991.1 transcription factor TCP20 [Cucumis melo var. makuwa])

HSP 1 Score: 495 bits (1275), Expect = 1.86e-175
Identity = 258/262 (98.47%), Postives = 259/262 (98.85%), Query Frame = 0


Query: 44  MGENKPAEIKDFQIAIAEKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQL 103
           MGENKPAEIKDFQIAIAEKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQL
Sbjct: 1   MGENKPAEIKDFQIAIAEKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQL 60

Query: 104 TRELDHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAAGSVSQQGASLSAGLHQKL 163
           TRELDHKSDGETIQWLLQQAEPSIIAATGTGTIPASALA AAGSVSQQGASLSAGLHQKL
Sbjct: 61  TRELDHKSDGETIQWLLQQAEPSIIAATGTGTIPASALATAAGSVSQQGASLSAGLHQKL 120

Query: 164 EELGGGGSSRANWGRPHLAATPTALWPSSVTGFGFQSSTAAAAVAAQSATNLPNETSNYF 223
           EELGGGGSSRANWGRPHLAATPTALWPSSV GFGFQSSTAAAAVAAQSATNLPNETSNYF
Sbjct: 121 EELGGGGSSRANWGRPHLAATPTALWPSSVPGFGFQSSTAAAAVAAQSATNLPNETSNYF 180

Query: 224 HKLGFPPFDLTPTNMGPMSFTSILGANTQQLPGLELGLSQDGHIGVLNPQALNQIYQQMG 283
           HKLGFPPFDLTPTNMGPMSFTSILGANTQQLPGLELGLSQDGHIGV+NPQALNQIYQQMG
Sbjct: 181 HKLGFPPFDLTPTNMGPMSFTSILGANTQQLPGLELGLSQDGHIGVINPQALNQIYQQMG 240

Query: 284 QPRVHQHHHQQPPAKDDSQDSA 305
           QPRVHQHH QQPPAKDDSQDSA
Sbjct: 241 QPRVHQHHPQQPPAKDDSQDSA 262

[Close]

BLAST of Cucsat.G15451 vs. NCBI nr
Match: XP_038898453.1 (transcription factor TCP20 [Benincasa hispida] >XP_038898462.1 transcription factor TCP20 [Benincasa hispida] >XP_038898470.1 transcription factor TCP20 [Benincasa hispida])

HSP 1 Score: 493 bits (1268), Expect = 1.16e-173
Identity = 273/312 (87.50%), Postives = 277/312 (88.78%), Query Frame = 0


Query: 10  MDPKTSSTTKQPQEEVVPNFFKLSQEEAAEEVAIMGENKPAEIKDFQIAIAEKEEGKKQL 69
           MDPKTSSTTKQPQE VV NF K  +EE      IMGENKPAEIKDFQIAIAEKEEGKKQL
Sbjct: 1   MDPKTSSTTKQPQE-VVANFLKPPEEEEL----IMGENKPAEIKDFQIAIAEKEEGKKQL 60

Query: 70  APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAEPSIIA 129
           APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTREL HKSDGETIQWLLQQAEPSIIA
Sbjct: 61  APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIA 120

Query: 130 ATGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEELGGGGSSRANW---GRPHLAATPT 189
           ATGTGTIPASALAAAAGSVSQQG SLSAGLHQKLEELGGGGSSR NW   GRPHLAATPT
Sbjct: 121 ATGTGTIPASALAAAAGSVSQQGVSLSAGLHQKLEELGGGGSSRVNWANLGRPHLAATPT 180

Query: 190 ALWPSSVTGFGFQSSTAAAA----VAAQSATNLPNETSNYFHKLGFPPFDLTPTNMGPMS 249
            LWPSSVTGFGFQ STAA+A    VAAQSATNL NETSNYFHKLGFPPFD +PTNMGPMS
Sbjct: 181 GLWPSSVTGFGFQPSTAASAAAVAVAAQSATNLANETSNYFHKLGFPPFDCSPTNMGPMS 240

Query: 250 FTSILGANTQQLPGLELGLSQDGHIGVLNPQALNQIYQQMGQPRVHQHH----------H 304
           FTSILGANTQQLPGLELGLSQDGHIGV+NPQALNQIYQQMGQPRVHQHH          H
Sbjct: 241 FTSILGANTQQLPGLELGLSQDGHIGVINPQALNQIYQQMGQPRVHQHHQHHHHHQHHHH 300

[Close]

BLAST of Cucsat.G15451 vs. NCBI nr
Match: XP_022934366.1 (transcription factor TCP20-like [Cucurbita moschata])

HSP 1 Score: 483 bits (1242), Expect = 1.27e-169
Identity = 269/313 (85.94%), Postives = 276/313 (88.18%), Query Frame = 0


Query: 10  MDPKTSSTTKQPQEEVVPNFFKLSQEEAAEEV-----AIMGENKPAEIKDFQIAIAEKEE 69
           MDPKTSS TKQPQE VVPNF KL QE+  E+      +IMGENKPAEIKDFQIA+AEKEE
Sbjct: 1   MDPKTSSATKQPQE-VVPNFLKLPQEQQQEQEQEQRQSIMGENKPAEIKDFQIAVAEKEE 60

Query: 70  GKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAE 129
           GKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTREL HKSDGETIQWLLQQAE
Sbjct: 61  GKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAE 120

Query: 130 PSIIAATGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEELGGGGSSRANWG---RPHL 189
           PSIIA TGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEE GGGGSSRANWG   RPHL
Sbjct: 121 PSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGGGGSSRANWGNLGRPHL 180

Query: 190 AATPTA-LWPSSVTGFGFQSSTAAAAVAA-QSATNLPNETSNYFHKLGFPPFDLTPTNMG 249
           AAT T  LWPSSV+GFG+QSSTAAAA AA QSATNL NETSNYFHKLGFPPFDLT TNMG
Sbjct: 181 AATATTGLWPSSVSGFGYQSSTAAAAAAAAQSATNLANETSNYFHKLGFPPFDLTSTNMG 240

Query: 250 PMSFTSILGANTQQLPGLELGLSQDGHIGVLNPQALNQIYQQMGQPRVHQHHHQ------ 304
           PMSFTSILG N QQLPGLELGLSQDGHIGV+NPQ LNQIYQQMGQ RVHQHHHQ      
Sbjct: 241 PMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARVHQHHHQHQQQQQ 300

[Close]

BLAST of Cucsat.G15451 vs. ExPASy TrEMBL
Match: A0A0A0L891 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G564320 PE=4 SV=1)

HSP 1 Score: 564 bits (1454), Expect = 1.66e-202
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 10  MDPKTSSTTKQPQEEVVPNFFKLSQEEAAEEVAIMGENKPAEIKDFQIAIAEKEEGKKQL 69
           MDPKTSSTTKQPQEEVVPNFFKLSQEEAAEEVAIMGENKPAEIKDFQIAIAEKEEGKKQL
Sbjct: 1   MDPKTSSTTKQPQEEVVPNFFKLSQEEAAEEVAIMGENKPAEIKDFQIAIAEKEEGKKQL 60

Query: 70  APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAEPSIIA 129
           APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAEPSIIA
Sbjct: 61  APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAEPSIIA 120

Query: 130 ATGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEELGGGGSSRANWGRPHLAATPTALW 189
           ATGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEELGGGGSSRANWGRPHLAATPTALW
Sbjct: 121 ATGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEELGGGGSSRANWGRPHLAATPTALW 180

Query: 190 PSSVTGFGFQSSTAAAAVAAQSATNLPNETSNYFHKLGFPPFDLTPTNMGPMSFTSILGA 249
           PSSVTGFGFQSSTAAAAVAAQSATNLPNETSNYFHKLGFPPFDLTPTNMGPMSFTSILGA
Sbjct: 181 PSSVTGFGFQSSTAAAAVAAQSATNLPNETSNYFHKLGFPPFDLTPTNMGPMSFTSILGA 240

Query: 250 NTQQLPGLELGLSQDGHIGVLNPQALNQIYQQMGQPRVHQHHHQQPPAKDDSQDSA 305
           NTQQLPGLELGLSQDGHIGVLNPQALNQIYQQMGQPRVHQHHHQQPPAKDDSQDSA
Sbjct: 241 NTQQLPGLELGLSQDGHIGVLNPQALNQIYQQMGQPRVHQHHHQQPPAKDDSQDSA 296

[Close]

BLAST of Cucsat.G15451 vs. ExPASy TrEMBL
Match: A0A1S3BNJ3 (transcription factor TCP20 OS=Cucumis melo OX=3656 GN=LOC103491806 PE=4 SV=1)

HSP 1 Score: 542 bits (1397), Expect = 7.79e-194
Identity = 289/297 (97.31%), Postives = 291/297 (97.98%), Query Frame = 0


Query: 10  MDPKTSSTTKQPQEEVVPNFFKLSQE-EAAEEVAIMGENKPAEIKDFQIAIAEKEEGKKQ 69
           MDPKTSSTTKQPQEEVVPNFFKLS+E E AEE  IMGENKPAEIKDFQIAIAEKEEGKKQ
Sbjct: 1   MDPKTSSTTKQPQEEVVPNFFKLSEEVEEAEE--IMGENKPAEIKDFQIAIAEKEEGKKQ 60

Query: 70  LAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAEPSII 129
           LAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAEPSII
Sbjct: 61  LAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAEPSII 120

Query: 130 AATGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEELGGGGSSRANWGRPHLAATPTAL 189
           AATGTGTIPASALA AAGSVSQQGASLSAGLHQKLEELGGGGSSRANWGRPHLAATPTAL
Sbjct: 121 AATGTGTIPASALATAAGSVSQQGASLSAGLHQKLEELGGGGSSRANWGRPHLAATPTAL 180

Query: 190 WPSSVTGFGFQSSTAAAAVAAQSATNLPNETSNYFHKLGFPPFDLTPTNMGPMSFTSILG 249
           WPSSVTGFGFQSSTAAAAVAAQSATNLPNETSNYFHKLGFPPFDLTPTNMGPMSFTSILG
Sbjct: 181 WPSSVTGFGFQSSTAAAAVAAQSATNLPNETSNYFHKLGFPPFDLTPTNMGPMSFTSILG 240

Query: 250 ANTQQLPGLELGLSQDGHIGVLNPQALNQIYQQMGQPRVHQHHHQQPPAKDDSQDSA 305
           ANTQQLPGLELGLSQDGHIGV+NPQALNQIYQQMGQPRVHQHH QQPPAKDDSQDSA
Sbjct: 241 ANTQQLPGLELGLSQDGHIGVINPQALNQIYQQMGQPRVHQHHPQQPPAKDDSQDSA 295

[Close]

BLAST of Cucsat.G15451 vs. ExPASy TrEMBL
Match: A0A5D3BBJ7 (Transcription factor TCP20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1661G00040 PE=4 SV=1)

HSP 1 Score: 495 bits (1275), Expect = 9.02e-176
Identity = 258/262 (98.47%), Postives = 259/262 (98.85%), Query Frame = 0


Query: 44  MGENKPAEIKDFQIAIAEKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQL 103
           MGENKPAEIKDFQIAIAEKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQL
Sbjct: 1   MGENKPAEIKDFQIAIAEKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQL 60

Query: 104 TRELDHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAAGSVSQQGASLSAGLHQKL 163
           TRELDHKSDGETIQWLLQQAEPSIIAATGTGTIPASALA AAGSVSQQGASLSAGLHQKL
Sbjct: 61  TRELDHKSDGETIQWLLQQAEPSIIAATGTGTIPASALATAAGSVSQQGASLSAGLHQKL 120

Query: 164 EELGGGGSSRANWGRPHLAATPTALWPSSVTGFGFQSSTAAAAVAAQSATNLPNETSNYF 223
           EELGGGGSSRANWGRPHLAATPTALWPSSV GFGFQSSTAAAAVAAQSATNLPNETSNYF
Sbjct: 121 EELGGGGSSRANWGRPHLAATPTALWPSSVPGFGFQSSTAAAAVAAQSATNLPNETSNYF 180

Query: 224 HKLGFPPFDLTPTNMGPMSFTSILGANTQQLPGLELGLSQDGHIGVLNPQALNQIYQQMG 283
           HKLGFPPFDLTPTNMGPMSFTSILGANTQQLPGLELGLSQDGHIGV+NPQALNQIYQQMG
Sbjct: 181 HKLGFPPFDLTPTNMGPMSFTSILGANTQQLPGLELGLSQDGHIGVINPQALNQIYQQMG 240

Query: 284 QPRVHQHHHQQPPAKDDSQDSA 305
           QPRVHQHH QQPPAKDDSQDSA
Sbjct: 241 QPRVHQHHPQQPPAKDDSQDSA 262

[Close]

BLAST of Cucsat.G15451 vs. ExPASy TrEMBL
Match: A0A6J1F1L8 (transcription factor TCP20-like OS=Cucurbita moschata OX=3662 GN=LOC111441555 PE=4 SV=1)

HSP 1 Score: 483 bits (1242), Expect = 6.13e-170
Identity = 269/313 (85.94%), Postives = 276/313 (88.18%), Query Frame = 0


Query: 10  MDPKTSSTTKQPQEEVVPNFFKLSQEEAAEEV-----AIMGENKPAEIKDFQIAIAEKEE 69
           MDPKTSS TKQPQE VVPNF KL QE+  E+      +IMGENKPAEIKDFQIA+AEKEE
Sbjct: 1   MDPKTSSATKQPQE-VVPNFLKLPQEQQQEQEQEQRQSIMGENKPAEIKDFQIAVAEKEE 60

Query: 70  GKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQAE 129
           GKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTREL HKSDGETIQWLLQQAE
Sbjct: 61  GKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAE 120

Query: 130 PSIIAATGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEELGGGGSSRANWG---RPHL 189
           PSIIA TGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEE GGGGSSRANWG   RPHL
Sbjct: 121 PSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGGGGSSRANWGNLGRPHL 180

Query: 190 AATPTA-LWPSSVTGFGFQSSTAAAAVAA-QSATNLPNETSNYFHKLGFPPFDLTPTNMG 249
           AAT T  LWPSSV+GFG+QSSTAAAA AA QSATNL NETSNYFHKLGFPPFDLT TNMG
Sbjct: 181 AATATTGLWPSSVSGFGYQSSTAAAAAAAAQSATNLANETSNYFHKLGFPPFDLTSTNMG 240

Query: 250 PMSFTSILGANTQQLPGLELGLSQDGHIGVLNPQALNQIYQQMGQPRVHQHHHQ------ 304
           PMSFTSILG N QQLPGLELGLSQDGHIGV+NPQ LNQIYQQMGQ RVHQHHHQ      
Sbjct: 241 PMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARVHQHHHQHQQQQQ 300

[Close]

BLAST of Cucsat.G15451 vs. ExPASy TrEMBL
Match: A0A6J1J7Q9 (transcription factor TCP20-like OS=Cucurbita maxima OX=3661 GN=LOC111482118 PE=4 SV=1)

HSP 1 Score: 474 bits (1219), Expect = 2.17e-166
Identity = 266/316 (84.18%), Postives = 273/316 (86.39%), Query Frame = 0


Query: 10  MDPKTSSTTKQPQEEVVPNFFKLSQEEAAEE--------VAIMGENKPAEIKDFQIAIAE 69
           MDPKTSS TKQPQE V   F KL QE+  E+         +IMGENKPAEIKDFQIA+AE
Sbjct: 1   MDPKTSSVTKQPQE-VETKFLKLPQEQQQEQRQEQEQEQQSIMGENKPAEIKDFQIAVAE 60

Query: 70  KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQ 129
           KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTREL HKSDGETIQWLLQ
Sbjct: 61  KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQ 120

Query: 130 QAEPSIIAATGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEELGGGGSSRANWG---R 189
           QAEPSIIA TGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEE GGGGSSRANWG   R
Sbjct: 121 QAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGGGGSSRANWGNLGR 180

Query: 190 PHLAATPTA-LWPSSVTGFGFQSSTAAAAVAA-QSATNLPNETSNYFHKLGFPPFDLTPT 249
           PHLAAT T  LWPSSV+GFG+QSSTAAAA AA QSATNL NETSNYFHKLGFPPFDLT T
Sbjct: 181 PHLAATATTGLWPSSVSGFGYQSSTAAAAAAAAQSATNLANETSNYFHKLGFPPFDLTST 240

Query: 250 NMGPMSFTSILGANTQQLPGLELGLSQDGHIGVLNPQALNQIYQQMGQPRVHQHHHQ--- 304
           NMGPMSFTSILG N QQLPGLELGLSQDGHIGV+NPQ LNQIYQQMGQ RVHQHHHQ   
Sbjct: 241 NMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARVHQHHHQHQQ 300

The following BLAST results are available for this feature:

BLAST of Cucsat.G15451 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSD5	1.3e-64	52.69	Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1	[more]
Q9C518	2.9e-27	63.06	Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1	[more]
Q9C9L2	4.9e-27	68.37	Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1	[more]
O64647	3.2e-26	83.10	Transcription factor TCP9 OS=Arabidopsis thaliana OX=3702 GN=TCP9 PE=1 SV=1	[more]
Q9LT89	4.2e-26	76.62	Transcription factor TCP19 OS=Arabidopsis thaliana OX=3702 GN=TCP19 PE=1 SV=1	[more]

BLAST of Cucsat.G15451 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148022.1	3.43e-202	100.00	transcription factor TCP20 [Cucumis sativus] >KGN58160.1 hypothetical protein Cs...	[more]
XP_008450133.1	1.61e-193	97.31	PREDICTED: transcription factor TCP20 [Cucumis melo]	[more]
KAA0060260.1	1.86e-175	98.47	transcription factor TCP20 [Cucumis melo var. makuwa] >TYJ95991.1 transcription ...	[more]
XP_038898453.1	1.16e-173	87.50	transcription factor TCP20 [Benincasa hispida] >XP_038898462.1 transcription fac...	[more]
XP_022934366.1	1.27e-169	85.94	transcription factor TCP20-like [Cucurbita moschata]	[more]

BLAST of Cucsat.G15451 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L891	1.66e-202	100.00	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G564320 PE=4 SV...	[more]
A0A1S3BNJ3	7.79e-194	97.31	transcription factor TCP20 OS=Cucumis melo OX=3656 GN=LOC103491806 PE=4 SV=1	[more]
A0A5D3BBJ7	9.02e-176	98.47	Transcription factor TCP20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1F1L8	6.13e-170	85.94	transcription factor TCP20-like OS=Cucurbita moschata OX=3662 GN=LOC111441555 PE...	[more]
A0A6J1J7Q9	2.17e-166	84.18	transcription factor TCP20-like OS=Cucurbita maxima OX=3661 GN=LOC111482118 PE=4...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 75..165 e-value: 3.4E-30 score: 105.6
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 76..130 score: 27.001366
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 283..305
None	No IPR available	PANTHER	PTHR31072:SF121	TRANSCRIPTION FACTOR TCP20-LIKE	coord: 46..304
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 46..304

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G15451.T1	Cucsat.G15451.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding