Cucsat.G15441 (gene) Cucumber (B10) v3

Overview
NameCucsat.G15441
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionCCHC-type domain-containing protein
Locationctg2009: 5094336 .. 5099687 (-)
RNA-Seq ExpressionCucsat.G15441
SyntenyCucsat.G15441
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCCTTTTTCTTTCCTTCTTCTGATTTCCTCTCCATCATGTTTTTGCCCGAATATTTGTCGCTCTCAGTATCAATTCCTCACTAACTAACTCTTCTCTTCCCCCCCTCCGTTTTGGATCTTTATTAGTCTTTCTATCTCTCCCCGACAAACCTTTCTTTTCGTTTCAGCGTTGTTCTTTGTACGTTTTCGATTTTGCTTCAATTGGAAGTTCATTATTCGTACTACTTGACTGTATGTGTTGATAATTGATGCTGCTACATTGTGTCTTTGTCTTGATTTTTTTTTTGTTTTTCTGATTCAAGTGTGCAATGTTTTATTCCGGCGACGTTGTTTGCCGAACTTTCTTTTTCGTCTTCTGATGGCCTTAGTGGAGTTGTGGAGTTGGAAGTGTGAGTTGCGAGTGGAAATGAAAACATTTCCCAAGTAATTATTCTTAGGGATTAACTGGTACCTTATATCTGAACCTGAATTTTAGAATTAGGATATGAGTAACTGGATGATGGGACATCCAATGGGTTTTTCTTCTCCTGCTTTATTTACTTCTCTCCGGAAATGGTACTGTTAGCTTTTTATGCAATCTAATACAACTGAGGGTTATGAATGTCACTTCCTTGATTATGGCACGTATTTACATCAAACGTTTGGTTCCTCCCCGTATAGTGCTAGCTGTTTATTTTTATTTTGTCTTTTTCCAATTCAAGGTGTTTTTAGTCTGGAATGGGCATTTCTCTTTTTCTGTGATAAATCTTTTCATTGATTAGTGGTGGGTCGTGGTGATAAAATGCAGGAGCTCAATTGAATTTGCTCTTTTTGTGATGGCAAATTCACCAGATGTGGATGCAGATGATGACTTTAGTGAGCTCTACAAGGAATACACAGGCCCTCCACGATCCACCACTGTTGTTCCACAAGAGAAGACGAATACAAATAAAAGGTCTCATGCTGGTTCTGATGAGGAGGATGAACCTCGTGATCCCAATGCTGTGCCAACTGATTTTACCAGCCGAGAAGCCAAGGTTTGGGAGGCCAAGTCAAAAGCTACAGAGAGGAATTGGAAGAAGAGAAAAGAGGAAGAAATGATCTGCAAAATATGTGGTGAATCAGGCCATTTTACTCAGGTATTATGGGTACTGTAGAATTTTTATTGATCTCGTAAAGTTATTGCACATACATTTTTCACAGCTAGAGAGATATGAGTTCTATTGTAAAAGTTCACGTGTATCAGGCAGTTTGTTCAATTAGAACACTAAATCTTTTTGAGGGGATGCTATCACTTGTATGTTAGTACCAGACTGAACTCTTAACTTCCTATGAAACAAGTGAAATTCCTTCCTGTATATTAAAACATTGTTGAGCTCATTGCAGTATTTTCCCCTTCTATTTTGTAATTATATTTGTAGTCTTTTGAACTCAAGAGTACAATTATACAACCTATAGTAAGGTCGTTTATTTTATATATTTGTAGTCTTCTTTCAAGTATCTGAAATTTTGTTGCGTATGACATACTGCATGTTAATTTTTAGGATCCATACTTTTGAAGTAGTGAAGTTTATTCAATTGCTGGCTGTTTAATCCTTAGGCAGTCAAGATCAAGAGACTTGGATCTGTCCTTAATTATCCAACTACTCTGTATGTTTTGTTCTCCTACTGGGGGTTTTTCCATTCCTTCGTAGCTTATGAAATTTAAATAACATATGAACTTGCTTATTTGTAATTATACAACTGCCCTGTTATTCATCAAATAAACCTTCACCTTATCTTGAGGCTGAATACATGGCAATAACTGATTCACTACCATCGGCTATGATCCTATTGAAAAAAAACTACCATCAACTGTGAAGGCCCAAGTAGCCTCATGGTTTTGAAGCTACACCTGCACATGTAAATTAACTTTTGTCCCACTTACACCTGTTCTATTGAGTCTGTATACGCAAAATTGCAAAAACCTCAACTAAAATAAATAAATAAATAAATAAAGAAAGAAAGAAAGAAAGAAAGAAAATATATATGAATTGGGACTCAATCATGGAGGCCAAGGTGTAAGAAAGGATTGTTTGTATTCACATCTATGATGGTTCTTCAAGGAAAAATTACTCACCAGATGATTGGTTAGAATATCTCTAATTTTTTTTGGTAGAGTATTCCTAATGATTAGGCATAGAAGCATTATCTTTGCCGAAGCATGGTTTTCCATCCAATACCAACTTGCATGTATACAGAATCCACACATTCACATTGTACACACGTGCGGGTACATGTGTGCAAGGGGAGAAGCGAGATTACAAGAAGTAGAACTACTGGAACTTCTTTATTTGCTTTAAGATCATGACCCTTTCTTCACACAAAAATAGAATTCAAGTGAATTATCACTGTTTTAACTAATGGTACTTACCAATTTTGTTTATTTATAGGGATGCCCCTCAACATTGGGATCAAGTCGTAAATCTCAAGATTTTTTTGAAAGGGTACCAGCCAGGGATAAACACGTGAGAGCAATTTTCACTGATAGAGTAATACAGAAGATAGAAAAGGACGTTGGTTGTAAGATCAAGATGGATGAGAAATTCATAATTGTTAGTGGCAAGGACAGGCTAATTTTGTTAAAGGGATTGGATGCTGTCAACAAGTTAATTAAGGAGGATGGCGATCAAAAGGGTTCTTCTAGTTCTCATATGAGTAGGTCCAGGTCACCGGATCGAAGCCCTGCTGGTTCAAGATCACAACGTTCTGATGTCCATAGATCACATTCTGGTCCTACAAATGCATCACAATTTCAACCTAGGTTTAGCAGACAGGAGAAGGTTGTGGAAAATCGTGCTCGTGATGATTTGCAGAAATATCCAAGGAGCTCGGTTCAAGGTAGGAAAAGCTTAGGATATGTTTACGGCATCAATAGAAAGCTGGTAATTCTATGTTGTAGCTCGTAGTTATCTTTGTTTCTCCATCTTTTTACAAATGATCTTTTTGTTCTTCTTAACAATGTTGTTTGTTGCTTATGTTTGTTTGCAGCACAAGGTAAGTTCTTCTGTTCAAGCTTATGTATGCAACTCTGAAGTAATTTTCACTGATAGGAATTGGTCAGATTGTCTTCAAAACATAATAATTTTATGAACGGGCATCCGGGTTGTTTTTCCTCCTATGGTTTCTTTGTATGATTTTATGATCACGTTGAATTTGACAACATATTGCATTGCTAAATCTACTATTAACATTGCTCTTCCTTTATTTTGAAGCGTATGGCAATGACAGAGTTAGAGGTCGTTCAAGCCACTCAAAGTCTCCAGCTCATCCACCTTATTCTGGCAGCTCGTTTGGTTCATATGATAGTTATCAGAACAAGAATGCATATGGTAGAACTGAAGGATGGGACAATGAGAGAAGAGGATCTGATTTGCAATCTAGTCGTCAGTTCGAGTATCCAGCTTTTCCCCAATCTCTTGAAGAACTGGAGATAGAGTATAAAAGGGAAGCAACTGAACTTGGAAAGATTCGTGATAAAGAAGAAGATGAAGAAAATTATAAAAACCGTGAGGTATGGATCCCCTATCAATGCAATCATTCATCAAATGGAACCTGGTGTATTTTTCCCTTTTTCTATGTTGAGATTTTCCCCCCATTTGGATCTTCTTTACACGATGAATTTCCTACTCTTCGTTATTTTAATTTCAAGTTTGTGCTTTTTACTTATTGTTCTATAAAAAGACTATAAGGGAGATGAGAGAGAGCTACACGAAGAAATTGACTCATTTGAGGGGCACACATGCAAAGCAGTGGGATGAGTTTCTCCAACTTGATGCCCAAAGGCGTCAGCAACAAGTGCACCAGCAAATGGCTGCTTCAGGTTTTGGTGGTTATAAGCAGCATAACTATTCTGAATATGAAGGTGGCTCAGTCAATGCCCATTATGAAGGGGCTAATTTGGCAGCCCTCGATTCAAGAAGCAAGTATCAAAATCACATGGAGAATTATCCTTCAAGACCTCATGGTAATTTTGGGGAGTTTCAACGTCAGAGGCGCGATGATTACGAGAATGCTTACAAACGATACTAATTTGTTAACCAGGAAGTAAGTTGGTAAGTAGTCTAACCCTTCAGCCAAATTAAAAGGATTTTAGTCATCTTCAACTTTTTGGTTTGGCTGTATGATTGGCAATACATAATCTCCATGCCGAATTTCATATTACTCCATAAAGTGCGTGGACTTGAGCCCATGTCCATTAGAAGGTTATTTTGGCGTTCCATGTGCAATCTTAATTTACAGCAAATGGCTCCTTAGCCAGCAATAGCTTTAATTTCATTCCCAAATTTTCAGGATTCAGATCCATCTTGGGTAGGCATAATGCTTGGAGGAACGCCTAATGAAAGGTAAGTATGTATCTTACGGTCTTGGACCAATTAGCATTCAAAGCAGCCTACTACCAGTTGTTTTTATAGTTAAGCTTGATAGTTCATCTGGTTCAGAACTTGTTGTAAAGAGAGGCATGCAATGCCATCTTGGATTTATTAGTCAGATGAAGTTCTCTTGAACGGTTGAGATTTTGAATTGGTTATAAATTGATACCTTGGCAAACTTTTCTTTCTAATGTTTTCCCTATCTAATTGTTGGGAACAAGCGGCATGACTGTATTGAAACAGTCCTTCACTGTCATGGAAGCTCAGGATAGTTGACCGGTTATTAAGTTTAAAAACTGCTTATCACTGCTATTTGGACTTGGAAGTTTTGAATAGTGTACTAGTTGTGATCCGATTATCAATCGGTAAAGCCACACAGTTCACTGGTTATGTTTTATATACTTATCTGAAACTGTGAACTCTTTTCCAAAATCCCACTATGATAACCCATAAACTAAAGGTATGGCTTGGTTCATATGTTTTTGGCTGGGAAATGAATGGATTTTTGATGTAGCAGAAGGGGAATTTCTCGTCTTTAATATTTTGTCTGGTCTTCTTTTTCTTTCTTATTCATATGAAATAGAAATGTCATAGAAGGGTATAGGTTTTCTTAGTTTATAATCTTTAGAAATGACTGTTTTACGTTAAATTTTTGTTTTATCAGAACTGCTTAATTTGAAGAAATGCTTCTGGAAAAGTAGTAAGTAAACGTAAGTAGAAGCGTTTGATTCTACATGATATTGATTAAGATATTAATTTGAAGCTAATGGAAAATATTATACTTGCCAATATCATTCCCCAACTTTATGGTTTTAAACAGATGGCCTGAATCCCTGGGATGACATAATACGCCCCAAAATTGAACCTTTGACTTCTAGAGAGTTCATGCAAATTACGATTGAGTTAAGCTCGTTTATGCATAATACATCTGATTGTTGAGAACGAACTGACTAACTTTTCTTACACATTAAGGTGTTGAAGTTTTGGGTCTTTTCACTAGCCTGCATCGGAATAAATCCATCAGTTGTAATTATTTTGTATGTACTTGTGAAGGCCAGGAAGTGACATGTTTTGATACTAAATAACTGCTTTAACAGGGGTCTTAGTGTGGATTATTGAGGTAAACTAGAAGTTTGGGTTGAGTCTTATCTTAATTATAGTTTGTTAAGTGTTTAGTTGTGTTTTTACAAGTATTGGTGAATTTTGTTGACCTTCTTCAATGGATAGAACCCTTTTATGTGGATAGTACATATTATAGTTATTTTATTTGAAAACAACCTATTTAGATGTTCATGACCAAGAATATTGGATATGTTTGATTATCCTATTTCCCTTTAGATATACAAAGCAAGTGGGGAGAAACGACAGGAATATATTTTGGAACATTCATTTGGAAGATGGGATAGGAACATATATTTATTTTGGTCATGGTGCTAGGAAATCCTAGGAGGACACCTTAACACTTTTGGTGAACTTGTATTTCTATTATTGAAGGTTCCATGTGTGTTTGATTCTAGAAGGTCAAATCTTCCTATATTTTGTGACTAATATCAGGTTTTATTTTATTTATATTTATTATCTAAGGGGTTCGTAGGTTTAGGAAGAGCTTTCCTTACTTTTTCAATTTCAATTCAAACAGGACTTTATTCCTCCGATTTTGCTTTGTACTAGATAATAGTTAGATGTTCTCAAATGATAACGTGAAATATCACTCCCCAAGATAATGAGGTTGCGTATTTTCAAATTTCGATGTCTTAACTTTCAAATGCTTGTACCTATTAGGAAAAACAAGAGACATGGAAATGAGAGGAATTTTGCTTAAAAATTTGATGGAACATATTGGAATTTTGAAATCATTTTGGTATTAGGTCCTTGAGCAGTTTATATCAATTCTCTACGAACTGATACCATGTCTTCTTAGTGCAATTAGTTGTAGGAAAATTTGAATTACAGGACTCGTGATTTTTAATATATTTGGTAATGGTACGCAAGGTTGTTTTGTTTAGCTGAGCATAGCAACCAAAGTCGAGGGGAGGACCCACTACAAACATAAAAAAGGCACTGTTTATTTTAATGAGACGTGGTTACCTCTTTCAAAGTAAAGCATAGCAAATGATTAGCATTGTTATAAAACAATTCCTACTTTTGTCTTATCTTTTAATAAGCATAAATTATTGTCTAGATTAGTTGATCAAACAACCGTTCAATTTCCACTCGGCACGTTTTTGAACTAAAAATGTTTGTTTTTATCAATTTTAACATAATTTAACATGGTTGAATCTTAATTAACATGTATTTCAGGTTAATTAGGAAAAAAACTAAGCTTCATAGAAGAAAAACTTTTTGAACTTCTTATTTGTTTCAAAAGCACTTTAATTTCCTTTTGAAGATGCAATATTTAATTTCCTTTTGAAGATGTAATATACAATCGAAAGGTTAAACTATCTCATCATAGAAAATTGAGATTTGAAATTGTGTGCGAGTCACTTAAAACCAAGAAATGAGAGTTAAAAAAAAATATTGGAAGAGTTTGTTTGGATTCTTAAGAAAAATGTTATTTCTAAAAAGTGGATTATTATTATTTTATAAAGGGTTCAAAATGCATTCAAAATGACTAAAATATTTCTGAATCATTTTGAAAGGCTAAAGTAATATTACATC

Coding sequence (CDS)

ATGGCAAATTCACCAGATGTGGATGCAGATGATGACTTTAGTGAGCTCTACAAGGAATACACAGGCCCTCCACGATCCACCACTGTTGTTCCACAAGAGAAGACGAATACAAATAAAAGGTCTCATGCTGGTTCTGATGAGGAGGATGAACCTCGTGATCCCAATGCTGTGCCAACTGATTTTACCAGCCGAGAAGCCAAGGTTTGGGAGGCCAAGTCAAAAGCTACAGAGAGGAATTGGAAGAAGAGAAAAGAGGAAGAAATGATCTGCAAAATATGTGGTGAATCAGGCCATTTTACTCAGGGATGCCCCTCAACATTGGGATCAAGTCGTAAATCTCAAGATTTTTTTGAAAGGGTACCAGCCAGGGATAAACACGTGAGAGCAATTTTCACTGATAGAGTAATACAGAAGATAGAAAAGGACGTTGGTTGTAAGATCAAGATGGATGAGAAATTCATAATTGTTAGTGGCAAGGACAGGCTAATTTTGTTAAAGGGATTGGATGCTGTCAACAAGTTAATTAAGGAGGATGGCGATCAAAAGGGTTCTTCTAGTTCTCATATGAGTAGGTCCAGGTCACCGGATCGAAGCCCTGCTGGTTCAAGATCACAACGTTCTGATGTCCATAGATCACATTCTGGTCCTACAAATGCATCACAATTTCAACCTAGGTTTAGCAGACAGGAGAAGGTTGTGGAAAATCGTGCTCGTGATGATTTGCAGAAATATCCAAGGAGCTCGGTTCAAGGTAGGAAAAGCTTAGGATATGTTTACGGCATCAATAGAAAGCTGGTAATTCTATGTTGTAGCTCGTAG

Protein sequence

MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERVPARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGDQKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDDLQKYPRSSVQGRKSLGYVYGINRKLVILCCSS
Homology
[Close]
BLAST of Cucsat.G15441 vs. NCBI nr
Match: XP_011651535.1 (uncharacterized protein LOC101215062 isoform X2 [Cucumis sativus] >KGN58209.2 hypothetical protein Csa_017630 [Cucumis sativus])

HSP 1 Score: 483 bits (1244), Expect = 5.29e-167
Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0 

Query: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60
           MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD
Sbjct: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60

Query: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120
           FTSREAKVWEAKSKATERNWKKRKEEEMICK CGESGHFTQGCPSTLGSSRKSQDFFERV
Sbjct: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKRCGESGHFTQGCPSTLGSSRKSQDFFERV 120

Query: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180
           PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD
Sbjct: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180

Query: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240
           QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD
Sbjct: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240

Query: 241 LQKYPRSSVQ 250
           LQKYPRSSVQ
Sbjct: 241 LQKYPRSSVQ 250

[Close]
BLAST of Cucsat.G15441 vs. NCBI nr
Match: XP_031738009.1 (uncharacterized protein LOC101215062 isoform X1 [Cucumis sativus])

HSP 1 Score: 483 bits (1244), Expect = 5.66e-167
Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0 

Query: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60
           MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD
Sbjct: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60

Query: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120
           FTSREAKVWEAKSKATERNWKKRKEEEMICK CGESGHFTQGCPSTLGSSRKSQDFFERV
Sbjct: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKRCGESGHFTQGCPSTLGSSRKSQDFFERV 120

Query: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180
           PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD
Sbjct: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180

Query: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240
           QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD
Sbjct: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240

Query: 241 LQKYPRSSVQ 250
           LQKYPRSSVQ
Sbjct: 241 LQKYPRSSVQ 250

[Close]
BLAST of Cucsat.G15441 vs. NCBI nr
Match: XP_008447472.1 (PREDICTED: uncharacterized protein LOC103489910 [Cucumis melo])

HSP 1 Score: 480 bits (1236), Expect = 8.67e-166
Identity = 247/250 (98.80%), Postives = 248/250 (99.20%), Query Frame = 0 

Query: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60
           MANSPDVD DDDFSELYKEYTGPPRSTTVV QEKTNTNKRSHAGSDEEDEPRDPNAVPTD
Sbjct: 1   MANSPDVDGDDDFSELYKEYTGPPRSTTVVSQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60

Query: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120
           FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV
Sbjct: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120

Query: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180
           PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD
Sbjct: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180

Query: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240
           QKGSSSSHMS+SRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD
Sbjct: 181 QKGSSSSHMSKSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240

Query: 241 LQKYPRSSVQ 250
           LQKYPRSSVQ
Sbjct: 241 LQKYPRSSVQ 250

[Close]
BLAST of Cucsat.G15441 vs. NCBI nr
Match: KAA0038119.1 (Zinc knuckle family protein isoform 1 [Cucumis melo var. makuwa] >TYK20488.1 Zinc knuckle family protein isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 480 bits (1236), Expect = 2.66e-165
Identity = 247/250 (98.80%), Postives = 248/250 (99.20%), Query Frame = 0 

Query: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60
           MANSPDVD DDDFSELYKEYTGPPRSTTVV QEKTNTNKRSHAGSDEEDEPRDPNAVPTD
Sbjct: 34  MANSPDVDGDDDFSELYKEYTGPPRSTTVVSQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 93

Query: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120
           FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV
Sbjct: 94  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 153

Query: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180
           PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD
Sbjct: 154 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 213

Query: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240
           QKGSSSSHMS+SRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD
Sbjct: 214 QKGSSSSHMSKSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 273

Query: 241 LQKYPRSSVQ 250
           LQKYPRSSVQ
Sbjct: 274 LQKYPRSSVQ 283

[Close]
BLAST of Cucsat.G15441 vs. NCBI nr
Match: XP_038905439.1 (uncharacterized protein LOC120091471 isoform X2 [Benincasa hispida])

HSP 1 Score: 465 bits (1196), Expect = 1.02e-159
Identity = 238/250 (95.20%), Postives = 245/250 (98.00%), Query Frame = 0 

Query: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60
           MANSPDVDADDDFSELYKEYTGPPRSTTVV QEKTNTNKRSHAGSDEE EPRDPNAVPTD
Sbjct: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVSQEKTNTNKRSHAGSDEEVEPRDPNAVPTD 60

Query: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120
           FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGS+RKSQDFFERV
Sbjct: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSNRKSQDFFERV 120

Query: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180
           PARDKHVRAIFTDRV+QKIEKDVGCKIKMDEKFIIVSGKDRLIL+KG+DAV+KLIKE+GD
Sbjct: 121 PARDKHVRAIFTDRVVQKIEKDVGCKIKMDEKFIIVSGKDRLILVKGVDAVHKLIKEEGD 180

Query: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240
           QKGSSSSHMSRSRSPDRSP GSRSQRSDVHRSHSGPTN+SQFQPRFSRQEKVVENR RDD
Sbjct: 181 QKGSSSSHMSRSRSPDRSPVGSRSQRSDVHRSHSGPTNSSQFQPRFSRQEKVVENRVRDD 240

Query: 241 LQKYPRSSVQ 250
           LQKY RSSVQ
Sbjct: 241 LQKYSRSSVQ 250

[Close]
BLAST of Cucsat.G15441 vs. ExPASy TrEMBL
Match: A0A1S3BHI0 (uncharacterized protein LOC103489910 OS=Cucumis melo OX=3656 GN=LOC103489910 PE=4 SV=1)

HSP 1 Score: 480 bits (1236), Expect = 4.20e-166
Identity = 247/250 (98.80%), Postives = 248/250 (99.20%), Query Frame = 0 

Query: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60
           MANSPDVD DDDFSELYKEYTGPPRSTTVV QEKTNTNKRSHAGSDEEDEPRDPNAVPTD
Sbjct: 1   MANSPDVDGDDDFSELYKEYTGPPRSTTVVSQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60

Query: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120
           FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV
Sbjct: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120

Query: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180
           PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD
Sbjct: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180

Query: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240
           QKGSSSSHMS+SRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD
Sbjct: 181 QKGSSSSHMSKSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240

Query: 241 LQKYPRSSVQ 250
           LQKYPRSSVQ
Sbjct: 241 LQKYPRSSVQ 250

[Close]
BLAST of Cucsat.G15441 vs. ExPASy TrEMBL
Match: A0A0A0L866 (CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G535630 PE=4 SV=1)

HSP 1 Score: 483 bits (1244), Expect = 8.37e-166
Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0 

Query: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60
           MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD
Sbjct: 105 MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 164

Query: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120
           FTSREAKVWEAKSKATERNWKKRKEEEMICK CGESGHFTQGCPSTLGSSRKSQDFFERV
Sbjct: 165 FTSREAKVWEAKSKATERNWKKRKEEEMICKRCGESGHFTQGCPSTLGSSRKSQDFFERV 224

Query: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180
           PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD
Sbjct: 225 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 284

Query: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240
           QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD
Sbjct: 285 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 344

Query: 241 LQKYPRSSVQ 250
           LQKYPRSSVQ
Sbjct: 345 LQKYPRSSVQ 354

[Close]
BLAST of Cucsat.G15441 vs. ExPASy TrEMBL
Match: A0A5D3DAF0 (Zinc knuckle family protein isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00620 PE=4 SV=1)

HSP 1 Score: 480 bits (1236), Expect = 1.29e-165
Identity = 247/250 (98.80%), Postives = 248/250 (99.20%), Query Frame = 0 

Query: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60
           MANSPDVD DDDFSELYKEYTGPPRSTTVV QEKTNTNKRSHAGSDEEDEPRDPNAVPTD
Sbjct: 34  MANSPDVDGDDDFSELYKEYTGPPRSTTVVSQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 93

Query: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120
           FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV
Sbjct: 94  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 153

Query: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180
           PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD
Sbjct: 154 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 213

Query: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240
           QKGSSSSHMS+SRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD
Sbjct: 214 QKGSSSSHMSKSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 273

Query: 241 LQKYPRSSVQ 250
           LQKYPRSSVQ
Sbjct: 274 LQKYPRSSVQ 283

[Close]
BLAST of Cucsat.G15441 vs. ExPASy TrEMBL
Match: A0A6J1DTF4 (uncharacterized protein LOC111023835 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111023835 PE=4 SV=1)

HSP 1 Score: 455 bits (1171), Expect = 1.54e-157
Identity = 228/252 (90.48%), Postives = 244/252 (96.83%), Query Frame = 0 

Query: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60
           MANSPDVDADDDFSELYKEYTGPPRST+V  QEKT T KRSHAGSDEEDEPRDPNAVPTD
Sbjct: 1   MANSPDVDADDDFSELYKEYTGPPRSTSVTAQEKTKTTKRSHAGSDEEDEPRDPNAVPTD 60

Query: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120
           FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGS+RKSQDFFER+
Sbjct: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSNRKSQDFFERI 120

Query: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180
           PARDKHVRA+FTD+V+QKIEKD+GCKIK+DEKFIIVSGKDRLILLKG+DAV+K+IKE+GD
Sbjct: 121 PARDKHVRAVFTDKVVQKIEKDIGCKIKIDEKFIIVSGKDRLILLKGVDAVHKVIKEEGD 180

Query: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240
           QKGSSSSHMSRSRSP+RSP GSRSQRS+VHRSHSGPTNASQFQPRFSR+EKVVENR RDD
Sbjct: 181 QKGSSSSHMSRSRSPERSPVGSRSQRSEVHRSHSGPTNASQFQPRFSRREKVVENRVRDD 240

Query: 241 LQKYPRSSVQGR 252
           LQKYPR S+Q R
Sbjct: 241 LQKYPRGSLQAR 252

[Close]
BLAST of Cucsat.G15441 vs. ExPASy TrEMBL
Match: A0A6J1DRY4 (uncharacterized protein LOC111023835 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023835 PE=4 SV=1)

HSP 1 Score: 455 bits (1171), Expect = 3.29e-156
Identity = 228/252 (90.48%), Postives = 244/252 (96.83%), Query Frame = 0 

Query: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60
           MANSPDVDADDDFSELYKEYTGPPRST+V  QEKT T KRSHAGSDEEDEPRDPNAVPTD
Sbjct: 1   MANSPDVDADDDFSELYKEYTGPPRSTSVTAQEKTKTTKRSHAGSDEEDEPRDPNAVPTD 60

Query: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120
           FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGS+RKSQDFFER+
Sbjct: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSNRKSQDFFERI 120

Query: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180
           PARDKHVRA+FTD+V+QKIEKD+GCKIK+DEKFIIVSGKDRLILLKG+DAV+K+IKE+GD
Sbjct: 121 PARDKHVRAVFTDKVVQKIEKDIGCKIKIDEKFIIVSGKDRLILLKGVDAVHKVIKEEGD 180

Query: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240
           QKGSSSSHMSRSRSP+RSP GSRSQRS+VHRSHSGPTNASQFQPRFSR+EKVVENR RDD
Sbjct: 181 QKGSSSSHMSRSRSPERSPVGSRSQRSEVHRSHSGPTNASQFQPRFSRREKVVENRVRDD 240

Query: 241 LQKYPRSSVQGR 252
           LQKYPR S+Q R
Sbjct: 241 LQKYPRGSLQAR 252

The following BLAST results are available for this feature:
BLAST of Cucsat.G15441 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G15441 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011651535.15.29e-16799.60uncharacterized protein LOC101215062 isoform X2 [Cucumis sativus] >KGN58209.2 hy... [more]
XP_031738009.15.66e-16799.60uncharacterized protein LOC101215062 isoform X1 [Cucumis sativus][more]
XP_008447472.18.67e-16698.80PREDICTED: uncharacterized protein LOC103489910 [Cucumis melo][more]
KAA0038119.12.66e-16598.80Zinc knuckle family protein isoform 1 [Cucumis melo var. makuwa] >TYK20488.1 Zin... [more]
XP_038905439.11.02e-15995.20uncharacterized protein LOC120091471 isoform X2 [Benincasa hispida][more]
BLAST of Cucsat.G15441 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BHI04.20e-16698.80uncharacterized protein LOC103489910 OS=Cucumis melo OX=3656 GN=LOC103489910 PE=... [more]
A0A0A0L8668.37e-16699.60CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G535630 P... [more]
A0A5D3DAF01.29e-16598.80Zinc knuckle family protein isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A6J1DTF41.54e-15790.48uncharacterized protein LOC111023835 isoform X3 OS=Momordica charantia OX=3673 G... [more]
A0A6J1DRY43.29e-15690.48uncharacterized protein LOC111023835 isoform X1 OS=Momordica charantia OX=3673 G... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 352..372
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..345
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 299..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 468..498
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 481..498
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..88
NoneNo IPR availablePANTHERPTHR34210:SF3OS01G0252900 PROTEINcoord: 38..498
NoneNo IPR availablePANTHERPTHR34210OS01G0252900 PROTEINcoord: 38..498
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 123..138
score: 8.910993
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 110..142

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G15441.T9Cucsat.G15441.T9mRNA
Cucsat.G15441.T3Cucsat.G15441.T3mRNA
Cucsat.G15441.T1Cucsat.G15441.T1mRNA
Cucsat.G15441.T7Cucsat.G15441.T7mRNA
Cucsat.G15441.T4Cucsat.G15441.T4mRNA
Cucsat.G15441.T13Cucsat.G15441.T13mRNA
Cucsat.G15441.T12Cucsat.G15441.T12mRNA
Cucsat.G15441.T11Cucsat.G15441.T11mRNA
Cucsat.G15441.T10Cucsat.G15441.T10mRNA
Cucsat.G15441.T17Cucsat.G15441.T17mRNA
Cucsat.G15441.T16Cucsat.G15441.T16mRNA
Cucsat.G15441.T15Cucsat.G15441.T15mRNA
Cucsat.G15441.T14Cucsat.G15441.T14mRNA
Cucsat.G15441.T27Cucsat.G15441.T27mRNA
Cucsat.G15441.T25Cucsat.G15441.T25mRNA
Cucsat.G15441.T2Cucsat.G15441.T2mRNA
Cucsat.G15441.T8Cucsat.G15441.T8mRNA
Cucsat.G15441.T6Cucsat.G15441.T6mRNA
Cucsat.G15441.T21Cucsat.G15441.T21mRNA
Cucsat.G15441.T22Cucsat.G15441.T22mRNA
Cucsat.G15441.T23Cucsat.G15441.T23mRNA
Cucsat.G15441.T20Cucsat.G15441.T20mRNA
Cucsat.G15441.T18Cucsat.G15441.T18mRNA
Cucsat.G15441.T5Cucsat.G15441.T5mRNA
Cucsat.G15441.T19Cucsat.G15441.T19mRNA
Cucsat.G15441.T26Cucsat.G15441.T26mRNA
Cucsat.G15441.T37Cucsat.G15441.T37mRNA
Cucsat.G15441.T36Cucsat.G15441.T36mRNA
Cucsat.G15441.T24Cucsat.G15441.T24mRNA
Cucsat.G15441.T30Cucsat.G15441.T30mRNA
Cucsat.G15441.T32Cucsat.G15441.T32mRNA
Cucsat.G15441.T34Cucsat.G15441.T34mRNA
Cucsat.G15441.T31Cucsat.G15441.T31mRNA
Cucsat.G15441.T28Cucsat.G15441.T28mRNA
Cucsat.G15441.T35Cucsat.G15441.T35mRNA
Cucsat.G15441.T33Cucsat.G15441.T33mRNA
Cucsat.G15441.T29Cucsat.G15441.T29mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding